LOCUS HO541558 823 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c51512_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO541558
VERSION HO541558.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 823)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..823
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 199 a 171 c 228 g 220 t
ORIGIN
1 gggattggat tcctctgtct ctcttgcact acaaattctt ggtgctgacc caacagagat
61 ggacatcagt gagacagatc ctgtgctccg gaagctaggc ttggagatgc tgcgccatct
121 cagtgcacac aaggagtaca taaaaggtct gcttggtgag ggtgagctat tgcatgcgtt
181 acggtatatg cgcaagcatc aggtggaggg ccttccgcca ggtgtattcc tggacatggc
241 catggccagt gaagatgcac ggacattggc agctgtactc cgttttttcg tagattttgt
301 accaaatttt tgaagtccag cgaggagttt gcgrkmtatt cgaagctctt gcgacataga
361 agtggcagca accaatgtct tgttacgtca agaacggcag ctggyggaca caatgcsatg
421 aggagcacag tcagaagcct tcatccagcg ttggccattg cgtaaatagg gaaaaagttt
481 tcagtaagtt tgtaaccgtc tgtttccata attgtttgtg gaaagttctc agaaggtacc
541 cgtctgtacc cgtgcactta gagcaggtcg tggatatggt acgggtagcc tttgagattg
601 tttggtggag gatgatcgtg gggccatacg tgcacccatg caagtgttgc taaggttatg
661 ggaacacaaa gctgtacatg tgagtttaga gccagttatg ggtaacctgt tacccctagc
721 tgcaggttag aatatgggta acatgtactg cttaacctgc tgcacatagc ctgcaggtat
781 aggctgtgct tgtaacctac tctaagcctg ctttaagcac agg
//