LOCUS HO535804 553 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c20298_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO535804
VERSION HO535804.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 553)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..553
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 111 a 163 c 114 g 153 t
ORIGIN
1 tagcctcgtc caaccttcca agtttttcaa gacaagatgc tttgcctata gcagcctcac
61 catgctcccc tgtcttgaat tcacacttgg ccatggctgc ctgaaaatgc acaagcgcct
121 tctcatattg ctgctcgytc accagccatc gacccagctt cagctccttt ttgatggcat
181 csagtaagat atgatcktca tgtgtcctat ggatctcttc cascagttca gcttttcgct
241 cttccaaaaw ctgttgtttc tcctcctcat ttctyggagc cggccgccgc ctcttttttc
301 ccttaagaag yggaccgcta taggtttctg agtgagwaga cgggtcgtct gtagtrctca
361 tccctgtaac ggaagagagg ytggatckgt gtcgacrctc ccctcttcca tcccccctat
421 ctctgcccca gcaattgcac aaatcctttg cggcgatgga ggtatccgcc atagccatgg
481 aaacgcttga tagtgtttac aagagcgctc gcctacgcga cttgcaagag aagatcgtga
541 cgatcgctgt cct
//