LOCUS HO535697 898 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c29570_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO535697
VERSION HO535697.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 898)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..898
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 207 a 183 c 254 g 253 t
ORIGIN
1 ttggtacgaa aagatacgac gcccattctg gtggtgagag agaaattcag aggactatgc
61 tggagcttct aaaccagctg gatggttttg atgcacgtgg tgatgtgaag gtgattttag
121 caacaaatcg aatcgacagc ttagacccgg cacttctgag acctggtcgt aattcccggg
181 attgagttcc ccttgcccga cataaagacg aagaggcgca tctttcagat ccatactggt
241 cgaatgactc tttcagacga tgtaagcctg gaggagtttg tgatgacgaa agatgagttg
301 tctggggctg atatcaaggc catttgtact gaagcgggtc ttcttgcact acgagaacgg
361 agaatgaagg taactcaggt ggatttcaag aaagccaagg agaaggttct ttacaagaag
421 aaggaagggg tgccggaggg gctctatatg taaatttgtt ggtagcggta tatagcttat
481 gttgtgcaaa tatactgagg attgaatgga ttcttttcct ttctttggtg gagatctcct
541 ttgctttttg agtttgattg tagcaagaag agcactagaa tgtgcatgct cacgccatcg
601 ccttttccat ggcttccaat ccaagcgcgg ctcgtctctg ctgcgctttg cggtgttcct
661 gtcctgtttg ggtccctgca ggagtcaggc ctcggtcctc acctttgcct gcaatccctc
721 cccgtcagcc actgccagtc catctctcta ttcgtttggt gccgtgctcc ttgggttttt
781 catccttttc gggwagtgag ggcggatgaa aagaggagtg gggtaggtgg gaaatgaggt
841 agatgaagtt tacagcctgg ttttgacatg tggcactgca gtgcgaaaat gctagact
//