LOCUS HO535488 646 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c57433_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO535488
VERSION HO535488.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 646)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..646
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 205 a 131 c 120 g 188 t
ORIGIN
1 atgtcgctaa cctgtatctt caattctttc gaaaaattat agatgttgat cacacacatc
61 atcaccgtac aaaaaaaatc aaattgaaaa gatacttgaa aatctatagt tcatcttcaa
121 ttattgtgaa agatcgacga taatttgaag acaagcaatg tgaccagaac tagccgattt
181 catattggca gtgattcgat aattaccgtc aacaatccca ggtaattttc ctgttatggg
241 cacaagcaca tcagacacac tgtaagtttt agcagggaat ggacaactac atggaagacc
301 atatttttcg aattcttttg gacacacttg agcccattgg ttacaaagat caccgtaact
361 gcatgaacct acattgtcaa cacatgggat tttaacataa aagcctgcta ttttcttttc
421 cattgtcaca tccactccaa ggtcagtagc agtagaaact gcttcactaa atgatgtact
481 aacagtgatg tttcctggta ttttgatggg acttggatca acagagagag cttttacykt
541 gaaccggatc ggaactgggt ccacattccg accatgaaaa ttgcagtatg cgtagtgttc
601 gctcgtctga cttggcaata gcgaacccaa ttagcattat gtgtgg
//