LOCUS HO528439 594 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c43704_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO528439
VERSION HO528439.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 594)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..594
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 148 a 140 c 137 g 168 t
ORIGIN
1 acaatcaaca gcgtttctgg cagcgtcaga ttcgcatgtc atatgcttgt tgtgttcata
61 ttggattcac aattcggtca ctctgttaac ataaagtcac atattcacca ggaagtgtta
121 cttgtgagct gacagtacat gcttgcaagg tcttgagtct tgacattttc waaggttatc
181 aaaaccgtaa aacatttcaa ggttttgaat ctttgacaac atttagagca ctacagccct
241 aaggtaaaca tcgtgccacc ctgacttcga agtgcaaacg gtgccttgga tccttagagc
301 actgagaggg gaagccctca cttccacgtc agcccggctg ccgacaatcg actattggtg
361 ccctgcacat gatcatggtc aagccctttg caagtaagtg aagggacgcc ttgtggctcg
421 gggatggtgg cagcgagttt cctggaatcc tggagatttg cgatagcacc agtcagaaga
481 cttgtgttca gacctgaaat cgataaacct tgccctattt gttgtagccg taatcgtaac
541 cgtccttacc gtagccgtct ttgtcatagt agtctttgcc atagtagtct ctgc
//