LOCUS HO512619 539 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c30795_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO512619
VERSION HO512619.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 539)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..539
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 151 a 105 c 132 g 149 t
ORIGIN
1 tgattgatgt caggttggcc gatgattacg cgacagctca tccaatggga gcaatcaaca
61 tagaaatgta tcgactaatt aaggaatgga caatttggga cgcggctcga cgagcggcgt
121 ttgccttttt tggaattttt aaaggcactg aaggagaacc cagagttcgt tacccagatt
181 cgcgccaaaa atttctaaac cggatatcga gccggaaaac gcgggaatca tcgtggcatg
241 ttatcaaggg ggtaccctta agcctagtac taatttcccg gaaggaaagt cgtcccgagt
301 ccctgatcgc ggcttacaga ttggtccaag ctgggttcaa gaatgtggtc catctggacg
361 gaggaatttt cgggcctggt acgatgacga tttgccggta gaagaaaarr ataacggttc
421 tcttcacgta ttgccacgtg tctgagcctc tttatatatg cggattactt tattgttgaa
481 ttttgttgaa ttttaattcg taattagatg ctaatcattt ctcaatgaca aaaaaaaaa
//