LOCUS HO507405 1031 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c39321_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO507405
VERSION HO507405.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 1031)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..1031
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 294 a 304 c 180 g 253 t
ORIGIN
1 tcctaggatt tctttgattc gacctacgat ttcaatcgaa ctcaagtcaa tgacgtcgga
61 atcgacagat ctactccatg ctcgtcacag atagaatcat ctggattcaa cagacttcac
121 ctagcacaat ccctattcaa tgatcctttc ctgcagagaa gcatacacct caatcaagtg
181 gtgacttcta cgctctatca tctaagtggg cctccttaaa tgagacagta aaaacccctt
241 caaaccttga ctgcgctgaa acttgcacct tgtaaacagc agcagcatac aactctgatc
301 ttactgcttc tgcaagagaa aaagtgaacc tagtcaccta caccgactaa aatcactccc
361 tccatgatgg gaggaaaaga aagaccaata catacaccac cttctctcgc ccatcacggt
421 tgttatgcta cataaggcag taatcagaca ttttgcaacc ttctcccctc aaaggccgag
481 cctccttatt gttcccttac tctatcttcc cgcgactaat ttgacactcg cacaacgaag
541 cccagaccct agttggcata cagtgcccgg tgaccaatag ccgattgtcg accaccaatt
601 gctgcacacc tttaaggtca acagaagacg gccgcggtca aactgaagca tttccaacaa
661 gtacgcagag atcccttgac caccaacacc gacattcaca gccaatctca acaatcagga
721 acccccatca accaactcgc agtcaatagg caaagctgcg cgtaacacca ccctctcctc
781 caaagatgct tgttgatctt aaccgcccct ccgaagatgc tagctgatcc tgaggtgtgt
841 gaaggagcgt gaggagaccg ttggatgctt tttccgaaga cgcacactct cccttcactt
901 cttcaccttc ttgccgaatt cgatccttca ctccatgtgg aaatttttta tcataaaata
961 gtacagggtt ctgagccaaa cgcttctctt cctgggaaac aacaactgag gtgatccatt
1021 tcttagttcc a
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