LOCUS HO499666 901 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c55614_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO499666
VERSION HO499666.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 901)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..901
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 202 a 190 c 274 g 229 t
ORIGIN
1 cgtatggcgt gcccttgtca gtggcagcag cttctccgtc caagtgcagg cgattgcaca
61 ggtgcagtgt ctgaaacgca gggwmytcgg mmgggwggag gattgggaag atggcgtgaa
121 ggaggcggct cgatggcgcg gcaggtgtat gttggcaatc ggtggcgatg gcgggggatg
181 accatctgct gtctttctga tgtgcagaga gtgaacagaa gctgtggcag agggtctttg
241 gccgtggggt actcgccggg ttgtgtacat gggctgattg taataagtcg gaccgccaga
301 agctctcggg gtgctctgga gatggcggct caatgttggc gacgtcagct ccacgagaga
361 gagaggtgtg caccgcgcat ggcgcctgaa gaagagaaga tgacgaagcg ttcccctctc
421 gatttcccag ccgagtggga gaggccaggg cccgggcgaa ggcctgacat ttttccacaa
481 ttcactccaa tgaaaccacc cttgccgcag ccattgcctg gggatccccc agagaaagaa
541 gatgatgagg aggaggaggg cgacgatgac ccggaaccag aagaagaacc tgaaccagaa
601 gagtaattgg aaggaaggcg cattgctgtt ttcttcaatc atcttttcca agctttttgt
661 tcattggatt ctttggagac aaacctgtgt gatcaatttt catatcgaaa taactttttt
721 cttacctcat ttgcgtcaag agtgttgatg tgcatcgact ttatctattg ttagtgcgtg
781 cttctgtgat gaatgttatg tcactgtgat ccagggcctc tctttttgtt tgatgaaaac
841 cgtcaaacct tttgattctt tgcaaatatc agatttctca aaaggcgggg agttgtttct
901 a
//