LOCUS HO491966 821 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c10880_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO491966
VERSION HO491966.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 821)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..821
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 221 a 151 c 242 g 207 t
ORIGIN
1 gtcctcacga acttttgggg aatggattta accactgaca agctgaggtc tctcgtgagg
61 aaatggcaga ctctcatcga ggcatacgtg gatgtgaaaa ctaccgacgg ctatctcctc
121 cgcatgttct gtattggttt caccaagaag cgcatgaatc aaatcaagaa gacgtgctac
181 gcccagtctt ctcagatcag ggcaattcgg aaaaagatga gggagatcat ggatagggaa
241 gcgcggagtt gcgatctgaa ggagctcgtc cagaggttta ttcccgaatc cattggaaaa
301 gatattgaga aagcctgtac cggaatctac cctcttcaga acactattat tcgcaaggtg
361 aagattctca aggctcctaa atttgacctg gggaagctga tggatgttca tggcgattac
421 acggaagaga caggtacgaa gatcgagcgg cctgttggtg acgaggtcga agctgaggcg
481 gaggcgacgg agccagttgg ggcctagagg actagaatga ttttaatctt gaagaaaggg
541 ccggccgcaa tcagtgattc tattggttaa ttgtaggtga agcgagtgtt tgcggggtca
601 cgagtgtttt agggttttgc gtgtcgaaca cggcggattt gcatagagag aaatttcagg
661 gtttgttcgt ggccgtaatc tggaaacgga ctgcaagcag gtgtgagtcg aaacggaatt
721 accttggtgt tgacagatct cttaattgcc gggtcagaat tgaggaagct gtttggaaaa
781 catggttttt tcagtcaagg ataagacttg ttaattgcga t
//