LOCUS HO487640 840 bp mRNA linear EST 19-JAN-2012
DEFINITION nitella_74953_c52822_c Nitella hyalina EST library Nitella hyalina
cDNA 5', mRNA sequence.
ACCESSION HO487640
VERSION HO487640.1
DBLINK BioSample: SAMN00169692
KEYWORDS EST.
SOURCE Nitella hyalina
ORGANISM Nitella hyalina
Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
Characeae; Nitella.
REFERENCE 1 (bases 1 to 840)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..840
/organism="Nitella hyalina"
/mol_type="mRNA"
/strain="KGK0190"
/db_xref="taxon:181804"
/clone_lib="SAMN00169692 Nitella hyalina EST library"
/dev_stage="all stages"
/note="Culture harvested from various time points during
the day and across the life cycle."
BASE COUNT 199 a 255 c 150 g 236 t
ORIGIN
1 ctgcacaagc taccaaccgt ggaatctggt gatggacgct catgcagccg catcgcccac
61 tattctagct cctttcaacg ggttgccaac ccatttcatc agtagggaca ctcctagacc
121 ataatcctac tcaaaacttc tattttgtac aaactaccaa ccatagagtc tggtaatgca
181 cgcttatgcc gtcgcatccc tcgcacttct aactacttcc taaggcacat ttgcctgtcg
241 ctcattactc tttggttgtt tgccaagctg tgaagtaaga tgatccgaaa aataatatgc
301 aactcgaaaa atccacaata tcactcgtag tggttcatgc tcgtgaatct ctaggaagta
361 gaaatatccg aaacaataat atgcaacttg aataatccat ctgcacatta taccaccaaa
421 tccatcctct ccgcctaatt ggtcctctcg ttttgttctc cccgtgccta tcattttgtt
481 ctgcccaatc gtgccagttg atggttgcgt gcctcccgtt ttcctctgcc caaccatgcc
541 cgtcgtttcc tcctgccctt atcacccctt gcgcctgtga tgcggcactg aatgtgccat
601 cttgcacgtc acctgtcctc ttaattacgg agtttcttgc agccgcgtgg cacacaggcc
661 tcaagcaatc gaggctagtt tgtcctcaca gcactacgag ggatatcacc accaccacca
721 ccactgcttc tgttggtatc ccgatggttg ttgcaggcca cttgcttatg gatgtcccaa
781 agcacaatct ctctgtcatt tgaactcgtc aaaaccaaca tcgatccatc ctgaatcccg
//