LOCUS HO479317 370 bp mRNA linear EST 19-JAN-2012
DEFINITION klebsormidium_60434_c30454_c Klebsormidium flaccidum EST library
Klebsormidium flaccidum cDNA 5', mRNA sequence.
ACCESSION HO479317
VERSION HO479317.1
DBLINK BioSample: SAMN00169691
KEYWORDS EST.
SOURCE Klebsormidium flaccidum
ORGANISM Klebsormidium flaccidum
Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE 1 (bases 1 to 370)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..370
/organism="Klebsormidium flaccidum"
/mol_type="mRNA"
/strain="UTEX 321"
/db_xref="taxon:3175"
/clone_lib="SAMN00169691 Klebsormidium flaccidum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 106 a 89 c 96 g 79 t
ORIGIN
1 ctccaacttc gagcggggtc ttgttaacta cgagaagccc aaccacagcg ttaaagccgt
61 cccccacgtc aacagctccg gtcaattgtg tggggcattc ttcaaggtcg acagccaagc
121 acagatggag aacgccataa agagcggtat gcatcaagta ggaagcgaaa tggagattaa
181 cccgtggcag tattagctgt atatagtggc ccgcactaac catgctggaa ccaggtttcg
241 gaatcgattt ggcgacagtt gtataggtcg ccgttgtaga aagagaggag tcccggccag
301 tcaaatacat tcaacagatc aagatgcccc gacgtcagag tcgtagaaag atgcttattg
361 ttttcaaacc
//