LOCUS HO472807 760 bp mRNA linear EST 19-JAN-2012
DEFINITION klebsormidium_60434_c11704_c Klebsormidium flaccidum EST library
Klebsormidium flaccidum cDNA 5', mRNA sequence.
ACCESSION HO472807
VERSION HO472807.1
DBLINK BioSample: SAMN00169691
KEYWORDS EST.
SOURCE Klebsormidium flaccidum
ORGANISM Klebsormidium flaccidum
Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE 1 (bases 1 to 760)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..760
/organism="Klebsormidium flaccidum"
/mol_type="mRNA"
/strain="UTEX 321"
/db_xref="taxon:3175"
/clone_lib="SAMN00169691 Klebsormidium flaccidum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 161 a 214 c 188 g 197 t
ORIGIN
1 ttgcaggaga tccgggcagc ctaccacgct cgctagacgt ggcaagaatc agaaaaaaat
61 atatggaagc ggcatcaagc tcttggtcca ggtcagtgac gaacttttct attgcccccc
121 ggaattccag gtgcggagac tcttttggtg caggagatgc agcacctgac aacctgaggc
181 tgatgtacct acttattaag tcgtatagtc aacagttgca gctcatctca atcggaagat
241 ccctctccca agctttcaca actgcattga tatcgaatga gcacgactta gtcgtgggct
301 ttgttctggt gagctgcctg acactggaac catctgttgt ccttgagcat cctcgcctga
361 acaaaggatg gacacctcaa gctccgcaga ggcggcaaaa tccagggctc cagcgaagca
421 cgtcctccgg acttgtgccc ttttgagcat cctctcattc tcgttgctca ttgagggtac
481 cacccgggtc aactcggtcg cgagcactcc ctctggcaag tggttcagca actacaaaga
541 cttcattccg tttctggaga tcctcgcctg gttgatcctc ctgcttatgg gccttggcgg
601 cctggctata tcgctctcta ttctcctctt tgatgtcgga caccccaaag cgactcttgt
661 tctgttggtt gtccaaactc tgggttggta tactctcatc attgagctgt tctttgccga
721 cgagggctcc tacggccaga gccgagcagg cttgtcaggc
//