LOCUS HO466681 821 bp mRNA linear EST 19-JAN-2012
DEFINITION klebsormidium_60434_c33255_c Klebsormidium flaccidum EST library
Klebsormidium flaccidum cDNA 5', mRNA sequence.
ACCESSION HO466681
VERSION HO466681.1
DBLINK BioSample: SAMN00169691
KEYWORDS EST.
SOURCE Klebsormidium flaccidum
ORGANISM Klebsormidium flaccidum
Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE 1 (bases 1 to 821)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..821
/organism="Klebsormidium flaccidum"
/mol_type="mRNA"
/strain="UTEX 321"
/db_xref="taxon:3175"
/clone_lib="SAMN00169691 Klebsormidium flaccidum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 181 a 236 c 207 g 197 t
ORIGIN
1 agctgaacag catgtcgttc ccgaaaggtg aacaaggttt acccttcgca ttccagttaa
61 acgctttgat cttgttcgac tcagcctgcg cttgacgacg tagcttagtc gctgtacact
121 agggtcgaca gcggaaccaa tggttgagag atgaacgctg tcgctacttt atgggtgcac
181 cctactgcag tgcatgcaca cactccgtgt tccttttgcc cgttgtgcct gccacctagg
241 cggtttgaat tgagagtaga agccggtgct atagtatttt gcgtgcatcc tatgttatga
301 gtgattgagg tcctctttct cgcacgattt tgaattgagc aactggtttt gacccttact
361 tcaaaaacac cgatgcgcga gagaggtttc ctaccgcagc caactgcgcc caaccacacg
421 atcctccgga agaaaacccc agacgtgcga atcggcgctt cgatttcggt tgtcgcccaa
481 gacaaagaga gttccatcag gaacacgaag ctgggggaac actgtacttc gccgagcgga
541 tccccctcgc ttcttctgaa cggggtcgtc cattcaccaa gacaactcct ctttccacct
601 gcacagtgtc gccccctact gctaccactc gtttttacat actgtgcgcc aggcgcgtcg
661 gtcatggccg agtcaagagg gctgccctcg tccagatcgc cttcttctcg catggtagcg
721 gagttgaagg aggagggcgc cgaaacacta caatgtcacc tcgagctggt ctccgaagga
781 accggtacgt gccaatctcg acaaagacgc agtctcctgg c
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