LOCUS HO442269 477 bp mRNA linear EST 19-JAN-2012
DEFINITION klebsormidium_60434_c12078_c Klebsormidium flaccidum EST library
Klebsormidium flaccidum cDNA 5', mRNA sequence.
ACCESSION HO442269
VERSION HO442269.1
DBLINK BioSample: SAMN00169691
KEYWORDS EST.
SOURCE Klebsormidium flaccidum
ORGANISM Klebsormidium flaccidum
Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE 1 (bases 1 to 477)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..477
/organism="Klebsormidium flaccidum"
/mol_type="mRNA"
/strain="UTEX 321"
/db_xref="taxon:3175"
/clone_lib="SAMN00169691 Klebsormidium flaccidum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 111 a 107 c 147 g 112 t
ORIGIN
1 tgaaggtctt gggagcaaat ggcggctggc gctagattgg cggctcatct gtcgcggtcg
61 gttgctctaa gcacgaccgc atgcagcacg tcgtccaggt gcagtagtgg gcaactcctc
121 ccccttccag tgtgcaggca agcgccttca cgcgcatggg gatgcgttct gaagcaagcg
181 tgcactcttt taggcgtgaa gacagactgg aggcagacgt catttgctgc agaactgacc
241 gggattaagg ctaataggaa tgggcgaaga tccaagaggg gaatgattgt agctgatctt
301 ggtggggagt attcagagaa ttttgatgat gttgagaagc acttggtgga ctactttaca
361 tacaaggccg tcaagactgt tcttgctcag ctgctagaga tgaacccgtc ccagtaccgg
421 tggctctaca gcttcgtggt ggaaaatcaa ccacaagata gcgtggtctt tatcagg
//