LOCUS HO439151 511 bp mRNA linear EST 19-JAN-2012
DEFINITION klebsormidium_60434_c45003_c Klebsormidium flaccidum EST library
Klebsormidium flaccidum cDNA 5', mRNA sequence.
ACCESSION HO439151
VERSION HO439151.1
DBLINK BioSample: SAMN00169691
KEYWORDS EST.
SOURCE Klebsormidium flaccidum
ORGANISM Klebsormidium flaccidum
Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE 1 (bases 1 to 511)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..511
/organism="Klebsormidium flaccidum"
/mol_type="mRNA"
/strain="UTEX 321"
/db_xref="taxon:3175"
/clone_lib="SAMN00169691 Klebsormidium flaccidum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 84 a 174 c 147 g 104 t
ORIGIN
1 cgggacaaca tggcgctgca ggggcgaaac tcaatggtgc ctcttctcct catgatcgtg
61 gcgaccttct tactggttcc cacagctgaa gcggcatccg ctggtcgccg cttgcttgcg
121 gaccaaggcg tgtgcggaag cggtccagcc cagtacttcc ccaaccgctg ctacttcaac
181 agtgaccctc agggggcgtt acgtctgctg cgacaaccag ggctgcgacg gcttcaaccc
241 gccgggcaac ttctttcccc actgcaagaa cgccgggttc gttccgtctg cttttggggt
301 cggcgcccct tcagcaatca cggtggttcc agcgttcgtc ccgtgccccg ccgtcaacgg
361 cgtcccgacc aacagctgct tcaaccagss ggcacgcagc acgtgtgctg cattaacccc
421 gactcgtgcg gcgccttggc tgcgaacggc aacccgacgt gcgcggctgg caattactac
481 gttttctgag tctgcggcgg cgcagtgtca a
//