LOCUS HO438388 505 bp mRNA linear EST 19-JAN-2012
DEFINITION klebsormidium_60434_c12218_c Klebsormidium flaccidum EST library
Klebsormidium flaccidum cDNA 5', mRNA sequence.
ACCESSION HO438388
VERSION HO438388.1
DBLINK BioSample: SAMN00169691
KEYWORDS EST.
SOURCE Klebsormidium flaccidum
ORGANISM Klebsormidium flaccidum
Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
Klebsormidiales; Klebsormidiaceae; Klebsormidium.
REFERENCE 1 (bases 1 to 505)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..505
/organism="Klebsormidium flaccidum"
/mol_type="mRNA"
/strain="UTEX 321"
/db_xref="taxon:3175"
/clone_lib="SAMN00169691 Klebsormidium flaccidum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 101 a 144 c 124 g 136 t
ORIGIN
1 ttttaacaac tagtagcgtc gtcgcgagtc tatgtacttt ccctcatgct atgcacttca
61 aaccctatgg aaagctagac aacgtaatag tatgatactg ctgaaattct actctccgtc
121 gattgccgca gcaagtatct gtccgtaccc atctcatctg acagctgctt ggaaccagca
181 cagatgctgg cggcttcgaa acaagtgcct aggccttttc ggcctttcaa gtttaagcac
241 gtaaaagctc tcctcacatc tccgccgtta accttctcga actttgtggg agccgcttct
301 ctttcaggac cagcgcctgc aggtcttgcg gcagagcgtc gaaaacgtcc tccaccacct
361 gggcgtaatc gtcgagctcg atcgccgcga aatcgggttc cgcttcttcg acaatgggtt
421 tcgctttgac ttggatggtt agcttgacct tgttgttgag gtcgtgaccc cggggctgcg
481 gccggggctg caggagcttt cgctc
//