LOCUS HO429352 555 bp mRNA linear EST 19-JAN-2012
DEFINITION chlorokybus_71836.3_c11765_c Chlorokybus atmophyticus EST library
Chlorokybus atmophyticus cDNA 5', mRNA sequence.
ACCESSION HO429352
VERSION HO429352.1
DBLINK BioSample: SAMN00169690
KEYWORDS EST.
SOURCE Chlorokybus atmophyticus
ORGANISM Chlorokybus atmophyticus
Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae;
Chlorokybales; Chlorokybaceae; Chlorokybus.
REFERENCE 1 (bases 1 to 555)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..555
/organism="Chlorokybus atmophyticus"
/mol_type="mRNA"
/strain="UTEX 2591"
/db_xref="taxon:3144"
/clone_lib="SAMN00169690 Chlorokybus atmophyticus EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 134 a 148 c 168 g 105 t
ORIGIN
1 taggcatgga taatgcccca gatgtcgtca tgcaagacgc atccgtagtt cagtcgccgg
61 tggctgtgac tgccgctgag ccttctacag ctgctgtgca agtgcctgtg gaatatgttg
121 ccacagggcc ttccgcaacc gttgtggaag gtgtcagctc caaggacgct gttatggaga
181 acaacactcc acagcccgct gtggtggaac cgcagccggt ggaagtacag ccagttgcac
241 aacagcaggt atgtgcaaga gaaaatgcat gacaaggtcg atcagctgca gcagcgcgtg
301 gctgacatca acatcgcacc tgaagtccct gcggaaagcg gggttgtggt gcctgatgcg
361 acagaggcac ggacccggtg ggtacaagtt actccgacca cgcagcagga cgagacgcct
421 gcacaggtgg agaacatgga tttcccctac acccagcagg aagaacagct gtgggccatt
481 ggggttcact gacatgaacc tcaaccgctt agtcttgcat gccacagaag gtgatgtcga
541 caagagtgtc gctcg
//