LOCUS HO427238 533 bp mRNA linear EST 19-JAN-2012
DEFINITION chlorokybus_71836.3_c12295_c Chlorokybus atmophyticus EST library
Chlorokybus atmophyticus cDNA 5', mRNA sequence.
ACCESSION HO427238
VERSION HO427238.1
DBLINK BioSample: SAMN00169690
KEYWORDS EST.
SOURCE Chlorokybus atmophyticus
ORGANISM Chlorokybus atmophyticus
Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae;
Chlorokybales; Chlorokybaceae; Chlorokybus.
REFERENCE 1 (bases 1 to 533)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..533
/organism="Chlorokybus atmophyticus"
/mol_type="mRNA"
/strain="UTEX 2591"
/db_xref="taxon:3144"
/clone_lib="SAMN00169690 Chlorokybus atmophyticus EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 156 a 125 c 136 g 116 t
ORIGIN
1 tgcgtgcacc gcacgtttct gaaaagcgtc tactgcgatg gaaaatccaa caccatcgta
61 ctcaaagttg ctaaagacgc gaccaaagca gaaatcaaag ctgctgtgca gaaactgttt
121 gaagtcgaag tcgaagtcgt taacaccctg gtagttaaag ggaaagttaa acgtcacgga
181 cagcgtatcg gtcgtcgtag cgactggaaa aagcttacgt caccctgaaa gaaggccaga
241 atctggactt cgttggcggc gctgagtaag tcggaggagt aatacaatgg cagttgttaa
301 atgtaaaccg acatctccgg gtcgtcgcca cgtagttaaa gtggttaacc ctgagctgca
361 caagggcaaa ccttttgctc cgttgctgga aaaaaacagc aaatccggtg gtcgtaacaa
421 caatggccgt atcaccactc gtcatatcgg tggtggccac aagcaggctt accgtattgt
481 tgacttcaaa cgcaaccaaa gacggtatcc ccggcagttg ttgaacgtct tga
//