LOCUS HO408343 489 bp mRNA linear EST 19-JAN-2012
DEFINITION chlorokybus_71836.3_c10665_c Chlorokybus atmophyticus EST library
Chlorokybus atmophyticus cDNA 5', mRNA sequence.
ACCESSION HO408343
VERSION HO408343.1
DBLINK BioSample: SAMN00169690
KEYWORDS EST.
SOURCE Chlorokybus atmophyticus
ORGANISM Chlorokybus atmophyticus
Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae;
Chlorokybales; Chlorokybaceae; Chlorokybus.
REFERENCE 1 (bases 1 to 489)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..489
/organism="Chlorokybus atmophyticus"
/mol_type="mRNA"
/strain="UTEX 2591"
/db_xref="taxon:3144"
/clone_lib="SAMN00169690 Chlorokybus atmophyticus EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 111 a 134 c 141 g 103 t
ORIGIN
1 cgggattggc gttgtgcggt ctgtgtgcga attgctggaa ctcgtggtca tgcatagcgt
61 gtgaggtgga gggaacagcg ttggcttacg tgtgagcggc aggtgcctgc tgctgtgcct
121 gccaaggtaa gcacagacaa gctgcaccga gacacagctg gcacttcaca gccaggcagc
181 ttcatcgcaa gccatgttcc ttaacatcca tgagccttca taagccatca gcatggccga
241 gtcgttagcc gatgctttgc aacgacgaag cttcaacatg acggtttgac actccagcta
301 tgaggcgtgc acttgtctta gacaatggcg catgcacaat taaggcaggc tacaccggag
361 acaacgccac agcagagagt ttcactaccg ccctgccgaa agtgctttgc cccaatgctg
421 tcggacgcat gcgcggcgat aagaagtggc tcgctgccga cctcctggaa tagatgcctc
481 agatctcgc
//