LOCUS HO401331 499 bp mRNA linear EST 20-JAN-2012
DEFINITION chaetospheridium_74953.1_c12194_c Chaetosphaeridium globosum EST
library Chaetosphaeridium globosum cDNA 5', mRNA sequence.
ACCESSION HO401331
VERSION HO401331.1
DBLINK BioSample: SAMN00169694
KEYWORDS EST.
SOURCE Chaetosphaeridium globosum
ORGANISM Chaetosphaeridium globosum
Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE 1 (bases 1 to 499)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..499
/organism="Chaetosphaeridium globosum"
/mol_type="mRNA"
/strain="SAG 26.98"
/db_xref="taxon:96477"
/clone_lib="SAMN00169694 Chaetosphaeridium globosum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 116 a 121 c 147 g 115 t
ORIGIN
1 cgggagccct tttgtggaga ttggacgggt ggccctgatc aactttggcc cagagtacgg
61 caaattggtc gtcatcgtgg atgttataga ccagaaccgg gcactcgttg actggcctga
121 tgcaatccgg cggccaatga acttcaagcg cttggcgctg acggacctga agatcgagac
181 ccggcgctgc cccccgaaga agtctctgat tgcagcaatc aaaactgctg acatcgaggg
241 gaactggaag aacagccctt ggggacgtaa attggttgtg cagaagaggc gggcgtctct
301 cactgatttt gaccggttca aggtcatgag ggcacggaca aagcgctcga ggcttctttc
361 aaagactgct taagctatct cgagcacgtt aagcaagtgg ggtctcacat ggggcagtgt
421 ggtggcgctg ctctaggaat gcataccaac ctaaagtcac ttcttttgtg ttttgtacac
481 aatccctgtt gtgccaaga
//