LOCUS HO390941 416 bp mRNA linear EST 20-JAN-2012
DEFINITION chaetospheridium_74953.1_c36568_c Chaetosphaeridium globosum EST
library Chaetosphaeridium globosum cDNA 5', mRNA sequence.
ACCESSION HO390941
VERSION HO390941.1
DBLINK BioSample: SAMN00169694
KEYWORDS EST.
SOURCE Chaetosphaeridium globosum
ORGANISM Chaetosphaeridium globosum
Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE 1 (bases 1 to 416)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..416
/organism="Chaetosphaeridium globosum"
/mol_type="mRNA"
/strain="SAG 26.98"
/db_xref="taxon:96477"
/clone_lib="SAMN00169694 Chaetosphaeridium globosum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 86 a 101 c 119 g 109 t
ORIGIN
1 cgggatcact ggtgctgcta aggctgtcgc ccttgtcttg ccaaacctga agggcaagct
61 caatggcatt gccctgcgtg ttcctacccc camtgtttct tgttgttgat ctcgtcatca
121 atgttgcaaa gaagagggtg attgctgagg agatcaatga ggccttcagg aaagctgctg
181 ctggcccact caagggaatc ctagcagttt gcgatctccc cctggtgtcc attgacttca
241 ggtgcagcga tgtgtcctca actattgact catccctaac catggtcatg ggtgatgaca
301 tggtgaaggt tgtggcctgg tatgacaacg agtggggtta cagccaacgg gttgtcgact
361 tgggcccacc ttgtggctga gaagtggccc gcaaacagta gagccttgta gtttga
//