LOCUS HO377751 1147 bp mRNA linear EST 20-JAN-2012
DEFINITION chaetospheridium_74953.1_c10755_c Chaetosphaeridium globosum EST
library Chaetosphaeridium globosum cDNA 5', mRNA sequence.
ACCESSION HO377751
VERSION HO377751.1
DBLINK BioSample: SAMN00169694
KEYWORDS EST.
SOURCE Chaetosphaeridium globosum
ORGANISM Chaetosphaeridium globosum
Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE 1 (bases 1 to 1147)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..1147
/organism="Chaetosphaeridium globosum"
/mol_type="mRNA"
/strain="SAG 26.98"
/db_xref="taxon:96477"
/clone_lib="SAMN00169694 Chaetosphaeridium globosum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 283 a 248 c 341 g 275 t
ORIGIN
1 gggatccgta cattgccgcg tccttctttc gggtattgct gccggagatc gtctttgcac
61 tctactgtgg ccagctcctg cgctccctgg cggactcgga gatgcagccg cgcagccgcc
121 acctggacgg cgtccaggtg gcgtacagcc tggcggggct ggcggtgtcg gcggcgctgg
181 ttgtggcgac catggtgtac ggggggcgcc gcttgaggga gctggaggcg gcggaggggc
241 agggcatgcc agagggtgaa tgtgaaagag gcttccaaac taccattccc gggatgcagt
301 ttggagaaga agaagcgggg gccgtggtca ggggaggttg gaaccctgga cgccgacttt
361 gagccgttac cgctgcaacc ttggggacct caggcgatgg tccatgaaag tttatctgtg
421 gaggatgaga atgggcaatt ggtgcccgcc cctagtggtg ttgtgtcctc atcgtaacgc
481 cacacattac catgtacaat gcttgaagcc taatggcgtg ggagcctttg tcatattgtc
541 acacactacc atgtaacaca cttcaatgtg cccaggtgac ccttccaaag cggattgacc
601 attgtaaaga gattgtcaaa ggagcaagaa gggacgggca ataagcattg ccgccttcca
661 ccgattcttt tttggtagga gaggtaaaga aattgtcaaa tgagcaagaa gggacgggca
721 ataagcattg ccgccttcca ccgattcttt tttggtagga gaggtatgca aatgatctag
781 cccttgataa gtagcttgac cccatcggcc taaaggatga agggggcaaa tacaagggga
841 ggggcaataa agacaagcgc actcattcat tcgtgctaat ttgttggagc aaattggtga
901 ggttgtatgt actatatttc ccaatttgga ccaagacaat tcttggtcaa gggtactttc
961 aagtagaaca atcgatgtga ccggaatccc aattgttgct aagcagcatg aaagaaattt
1021 ggtcggttca acatgttatg tatcggagct tgaagatgca taatgcaagt ctatagagtt
1081 tagctaacta gccatcatga gatgttgttt gacaagagtg aattaattaa attaagcaag
1141 tgtcctt
//