LOCUS HO368481 257 bp mRNA linear EST 20-JAN-2012
DEFINITION chaetospheridium_74953.1_c41480_c Chaetosphaeridium globosum EST
library Chaetosphaeridium globosum cDNA 5', mRNA sequence.
ACCESSION HO368481
VERSION HO368481.1
DBLINK BioSample: SAMN00169694
KEYWORDS EST.
SOURCE Chaetosphaeridium globosum
ORGANISM Chaetosphaeridium globosum
Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE 1 (bases 1 to 257)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..257
/organism="Chaetosphaeridium globosum"
/mol_type="mRNA"
/strain="SAG 26.98"
/db_xref="taxon:96477"
/clone_lib="SAMN00169694 Chaetosphaeridium globosum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 67 a 42 c 73 g 68 t
ORIGIN
1 cgggacactt ccaagatcaa acgaggagga aggagatgta tttgggattc agagatacga
61 tgttaagaat tatcaatcca tagcattttt aggatcaaga ttgcgamwtc scrksmcttg
121 ccttgacttc atggctttcg tgtttggtca ggcgaaaagt gcgtggggta ggtagaagtg
181 gaaggggcgg ataggtagga atgagtagtc gactacctaa acctaaaact ttcggtttgg
241 ggtttcccgg tttccca
//