LOCUS HO367766 741 bp mRNA linear EST 20-JAN-2012
DEFINITION chaetospheridium_74953.1_c11387_c Chaetosphaeridium globosum EST
library Chaetosphaeridium globosum cDNA 5', mRNA sequence.
ACCESSION HO367766
VERSION HO367766.1
DBLINK BioSample: SAMN00169694
KEYWORDS EST.
SOURCE Chaetosphaeridium globosum
ORGANISM Chaetosphaeridium globosum
Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE 1 (bases 1 to 741)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..741
/organism="Chaetosphaeridium globosum"
/mol_type="mRNA"
/strain="SAG 26.98"
/db_xref="taxon:96477"
/clone_lib="SAMN00169694 Chaetosphaeridium globosum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 206 a 227 c 126 g 167 t
ORIGIN
1 gcacatcaca acacgtaggg gccgagggac atactcctta tttgcccatg tggcaattca
61 acaccgcaaa aatgtggaag cgcaatggtt caattttctc aagcactccc atgagtacct
121 gatacccaac cggcaagtca cgcagtgagt ctcgaaatga atcactacaa acttcgggcc
181 ctcattttac gtccatcgag ccccaaccac atcatggtcc tctactatgc actttgaaac
241 aactctaccc aaccaaaccc gttatgtcga atcgccctcc accgccacca aagaaaaagt
301 tgcccgaacc ctccaaccct tagcttcttg gacaaccctt ggctcattca ttgctattga
361 gatatggaag atcactcagt acttgccatg gtagctcctg cagtgatttg gggacaaaag
421 gcacggcttt ctaagactgc ccataaccca tcaaacatct gcaggataaa aaagaccgct
481 acatatttca cacgaccaac aatcgagtta ttccgaagac tcccctttga cctcccaact
541 ccgaaggacc tggaaattgc accatgtttc ttatgcctcg tgatcaagtt tctaaacgct
601 tcatcacttc ccaacaatgt acaactcggc agctcagcta cacccgcagg gatttagaga
661 tttctatgcc cccccccacc attctaacta ggtcgascta ctrgtcacct aacgdgyacy
721 traacmamwc kksrwcggwc c
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