LOCUS HO362004 405 bp mRNA linear EST 20-JAN-2012
DEFINITION chaetospheridium_74953.1_c39893_c Chaetosphaeridium globosum EST
library Chaetosphaeridium globosum cDNA 5', mRNA sequence.
ACCESSION HO362004
VERSION HO362004.1
DBLINK BioSample: SAMN00169694
KEYWORDS EST.
SOURCE Chaetosphaeridium globosum
ORGANISM Chaetosphaeridium globosum
Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE 1 (bases 1 to 405)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..405
/organism="Chaetosphaeridium globosum"
/mol_type="mRNA"
/strain="SAG 26.98"
/db_xref="taxon:96477"
/clone_lib="SAMN00169694 Chaetosphaeridium globosum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 66 a 139 c 122 g 78 t
ORIGIN
1 cgggatggcc gccgccactg cttgcctcaa tggtgccatt gttggccagg tcgccctcaa
61 ggcgcctgtg gagctgaagg tgcaggatgt gtcccgggtg tccatgatgg cgacacgcag
121 ggcctcatca tcagacagca tctggtatgg tgctgaccgc cccaagtttc tgggccccct
181 gtctggcgag acccccagct acctcactgg cgagtacccc ggtgactatg gctgggacac
241 cgccggtctg tcctctgatc ccgagacctt cgcccgcaac cgcgagcttg aggtcctgca
301 cgcccgctgg gccatgctcg gaacactcgg ctgcctcgtg ccagagctcg accagagccc
361 agatgcccag ccagtatggt tcaaggctgg tgcccagatc ttcca
//