LOCUS HO358075 468 bp mRNA linear EST 20-JAN-2012
DEFINITION chaetospheridium_74953.1_c12731_c Chaetosphaeridium globosum EST
library Chaetosphaeridium globosum cDNA 5', mRNA sequence.
ACCESSION HO358075
VERSION HO358075.1
DBLINK BioSample: SAMN00169694
KEYWORDS EST.
SOURCE Chaetosphaeridium globosum
ORGANISM Chaetosphaeridium globosum
Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE 1 (bases 1 to 468)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..468
/organism="Chaetosphaeridium globosum"
/mol_type="mRNA"
/strain="SAG 26.98"
/db_xref="taxon:96477"
/clone_lib="SAMN00169694 Chaetosphaeridium globosum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 94 a 125 c 133 g 116 t
ORIGIN
1 gccgggatgg ccggtgggct atgctgggag tagctggtgt cattgcaccc gagcttctta
61 ccaagattgg tgtgtgggac gcaccagtct ggtatgatgc tggttcagtc gagtactttg
121 cacccaagtc tgcccttacc tgggtagagt tccttctctt ccacttcgtt gaggtccgga
181 gataccagga tatcaggtac ccagggagcg ttaaccagga ccccatcttc acgaacaaca
241 agctgccagc aggggaggtt ggttacccag gtggcatctt caacttcctc ggttatgctg
301 ctaacatgca gtcgaaggag aaggagattg ccaacggacg cttggccatg cttgccttcc
361 tcggcttcat cgtgcaatca aaggtcactg gagctggccc ggttgagaac ttgttcgctc
421 acttgtctga cccatggcac gtcaccattg tccagagctt ggccaagt
//