LOCUS HO357474 850 bp mRNA linear EST 20-JAN-2012
DEFINITION chaetospheridium_74953.1_c13371_c Chaetosphaeridium globosum EST
library Chaetosphaeridium globosum cDNA 5', mRNA sequence.
ACCESSION HO357474
VERSION HO357474.1
DBLINK BioSample: SAMN00169694
KEYWORDS EST.
SOURCE Chaetosphaeridium globosum
ORGANISM Chaetosphaeridium globosum
Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae;
Coleochaetales; Chaetosphaeridiaceae; Chaetosphaeridium.
REFERENCE 1 (bases 1 to 850)
AUTHORS Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
TITLE Broad phylogenomic sampling and the sister lineage of land plants
JOURNAL PLoS ONE 7 (1), e29696 (2012)
COMMENT Contact: Delwiche CF
Department of Cell Biology and Molecular Genetics
University of Maryland - College Park
2108 Bioscience Research Building, College Park, MD 20742, USA
Tel: 301 405 8286
Email: delwiche@umd.edu
ESTs cleaned with Lucy, seqclean, and repeatmasker.
FEATURES Location/Qualifiers
source 1..850
/organism="Chaetosphaeridium globosum"
/mol_type="mRNA"
/strain="SAG 26.98"
/db_xref="taxon:96477"
/clone_lib="SAMN00169694 Chaetosphaeridium globosum EST
library"
/dev_stage="all except for sexual stages"
/note="Culture harvested from various time points during
the day and across the life cycle. No sexual stage was
seen for this strain."
BASE COUNT 182 a 233 c 275 g 159 t
ORIGIN
1 cccgggatac gcctcatcca tggaggcgct gaagcagccg accatcagag tcgtggcaat
61 cattgcggag ggcgtgccgg aacaggatgc caagaagctc attgcgtatg cacgtgccaa
121 tcacaaggtt atcattggac cggccacagt tggaggggtg caggccggcg ccttcaagat
181 tggggacact gctgggacgc tcgacaacat cattcagtgc aagctctacc ggccaggctc
241 tgtgggcttt gtctccaagt cggggggtat gtccaatgag ctgtacaacg tgctggcccg
301 gacaacagat ggtctttatg aaggcattgc aattggaggg gatgttttcc ccggttccac
361 cctgtcagat cacgtgctgc ggttcaacag cattcccaag atcaagatga ttgtggtact
421 tggagagctt ggaggccagg acgagtactc cctggttgag gcactcaagg agggcaaggt
481 tcrgaagccc gttgtagcat gggtgtccgg cacttgcgcc aagctcttca agtccgaagt
541 ccagtttggc catgcggggg ccaagagcgg cggcgacgag gagtctgcgc aggccaagaa
601 ccaggcgctc aaggacgcag gggcgcaggt gcccgaatcc ttcgaggggc tggagcccct
661 catcgccgag gtctaccaga agctggttgc tgatgggacc attgtcccca ccgaagaggt
721 gaagccaccg acagtcccag aggacctgag cttggctatc aaggcgggga aagtgcgcgc
781 ccctacacac attgtgtcca ccatctgcga cgaccgcggg gaggagccga cgtatgccgg
841 tgtccccatg
//