LOCUS HM570047 9184 bp DNA linear BCT 25-JUL-2016 DEFINITION Escherichia coli strain 09012 plasmid pHNE IscR1 (iscR1) gene, partial cds; putative transposase (tnpACP1) and 16S rRNA methylase (armA) genes, complete cds; insertion sequence IS26 transposase gene, complete cds; and Tn3-like transposase (tnpA) and Tn1721-like transposase (tnpA) genes, complete cds. ACCESSION HM570047 VERSION HM570047.1 KEYWORDS . SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 9184) AUTHORS Du,X.D., Liu,H.B., Wu,C.M., Li,X.S., Cao,X.Y., Cui,B.A., Zhang,S.M., Hu,G.Z. and Shen,J.Z. TITLE The genetic environment of armA on pHNE, an IncN plasmid, in one Escherichia coli isolate from a chicken JOURNAL J. Antimicrob. Chemother. 65 (12), 2694-2695 (2010) PUBMED 20947619 REFERENCE 2 (bases 1 to 9184) AUTHORS Du,X. and Liu,H. TITLE Direct Submission JOURNAL Submitted (19-JUN-2010) College of Veterinary Medicine and Animal Husbandry, Henan Agricultural University, No. 95 Wenhua Road, Zhengzhou, Henan 450002, P.R. China FEATURES Location/Qualifiers source 1..9184 /organism="Escherichia coli" /mol_type="genomic DNA" /strain="09012" /host="chicken" /db_xref="taxon:562" /plasmid="pHNE" gene <1..579 /gene="iscR1" CDS <1..579 /gene="iscR1" /codon_start=1 /transl_table=11 /product="IscR1" /protein_id="ADP55011.1" /translation="KLERLCRYISRPAVSEKRLALTANGQVRYELKTPYRNGTTHVIF EPLDFIAKLAALVPKPRVNLTRFHGVFAPNSKHRVQVTPAKRGKKPDKSEGLDTNWRD KSPAERHRAMTWMQRLKRVFNIDIEVCEHCGGHVKVIASIEDPKVIEQILKHLKQKTA KANAAKQRELPPERAPPLTPSLFDPSQSRLFD" gene 915..1652 /gene="tnpACP1" CDS 915..1652 /gene="tnpACP1" /note="TnpAcp1" /codon_start=1 /transl_table=11 /product="putative transposase" /protein_id="ADP55012.1" /translation="MLKGLFKLPLRALEGFINSLFQLMAVPLQSPDYSCISKRAKTVD IKYRLPSQGPVAHLVIDATGLKVYGEGEWKIRKHGKEKRRVWRKLHLAVDATTHAVIA AEVSLETVADNEVLPTLLNPLRRKIKQVSADGAYDTKACHALLKKKGAKATIPPRKNA APWEEGHPRNEAVTALKAGELKQWKKDSGYHQRSIAETAMYRFKQLIGPTLSLRNYNA QVGEILAGVKVMNKLIGLGMPVRQPVN" gene 1981..2754 /gene="armA" CDS 1981..2754 /gene="armA" /note="ARMA" /codon_start=1 /transl_table=11 /product="16S rRNA methylase" /protein_id="ADP55013.1" /translation="MDKNDVVKKILESKKYENLDSDIVEKVVSISEKKYKLKEVENYS KKKLHQIWGSYYSAYPNWDKLLKKYNQGQLSIEDLLKIHSSTNERVATLNDFYTYVFG NIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYR FLNKESDVYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEK GMEENYQLWFESFTKGWIKILDSKVIGNELVYITSGFQK" CDS 2819..3523 /codon_start=1 /transl_table=11 /product="transposase" /protein_id="ADP55014.1" /translation="MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDH STIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTV DFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDV EHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYY GDPLGEMRLVSRVFEM" mobile_element <2819..>3523 /mobile_element_type="insertion sequence:IS26" gene 3593..5446 /gene="tnpA" CDS 3593..5446 /gene="tnpA" /note="TnpA" /codon_start=1 /transl_table=11 /product="Tn3-like transposase" /protein_id="ADP55015.1" /translation="MVEQYGRVRRFLPHLLNTVKFSSAPAGVTTLNACDYLSREFSSR RQFFDDAPTEIISRSWKRLVINKEKHITRRGYTLCFLSKLQDSLRRRDVYVTGSNRWG DPRARLLQGADWQANRIKVYRSLGHPTDPQEAIKSLGHQLDSRYRQVAARLCENEAVE LDVSGPKPRLTISPLASLDEPDSLKRLSKMISDLLPPVDLTELLLEINAHTGFADEFF HASEASARVDDLPVSISAVLMAEACNIGLEPLIRSNVPALTRHRLNWTKANYLRAETI TSANARLVDFQATLPLAQIWGGGEVASADGMRFVTPVRTINAGPNRKYFGNNRGITWY NFVSDQYSGFHGIVIPGTLRDSIFVLEGLLEQETGLNPTEIMTDTAGASELVFGLFWL LGYQFSPRLADAGASVFWRMDHDADYGVLNDIARGQSDPRKIVLQWDEMIRTAGSLKL GKVQVSVLVRSLLKSERPSGLTQAIIEVGRINKTLYLLNYIDDEDYRRRILTQLNRGE SRHAVARAICHGQKGEIRKRYTDGQEDQLGTLGLVTNAVVLWNTIYMQAALDHLRAQG ETLNDEDIARLSPLCHGHINMLGHYSFTLAELVTKGHLRPLKEASEAENVA" gene 5522..6196 /gene="tnpA" CDS 5522..6196 /gene="tnpA" /note="TnpA-Tn1721-like" /codon_start=1 /transl_table=11 /product="Tn1721-like transposase" /protein_id="ADP55016.1" /translation="MHLLGFRFAPRIRDLGETKLYVPQGVQAYPTLRPLIGGTLNIKH VRAHWDDILRLASSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWL QSVELRRRVHAGLNKGEARNSLARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVL WNTVYLERATQGVVEAGKPVDGELLQFLSPLGWEHINLTGDYVWRQSRRLEDGKFRPL RMPGKP" BASE COUNT 2555 a 2103 c 2236 g 2290 t ORIGIN 1 aagcttgagc gcttgtgtcg ctacattagt cggccagcgg tttcagaaaa acgtctggca 61 ttaaccgcca atgggcaggt gcgttacgag ctcaaaactc cgtaccgcaa tggcaccacc 121 catgtgatct tcgagccgct ggacttcatc gccaaactcg ctgcgttggt acctaagccg 181 cgagtcaacc tcacacgctt ccacggcgtc tttgcaccga acagcaaaca ccgagttcaa 241 gtaacacccg ccaagcgggg caagaagccc gacaaatcgg aaggtctcga tactaactgg 301 cgtgacaaga gtcctgcaga gcgccaccgc gccatgacct ggatgcaacg cctcaagcga 361 gtcttcaata ttgatattga agtctgcgaa cactgcggcg gtcacgtcaa agtgattgcc 421 agcatcgaag atccgaaggt cattgagcag attctcaagc atctgaaaca gaaaacagcc 481 aaggcgaatg ccgccaagca gcgtgagctg ccaccagaac gagcgccgcc actgactccc 541 agcctgttcg atccatcaca gagtcgtctc tttgactgac gaccccaaat ccaacactgc 601 tcaacactgc caacttttaa acggggcggt ggggcagttt gtatctctcg agctatcagg 661 ctagagattt taccgccaaa tcgaacctta ttagagcggt ttaggctgga ccggcagtta 721 aaattggggc ttgagcggta aacgagtgag ggaatttcag gtaagatact tcggatgagg 781 agcaaaaagg tggtttatac ttcctatacc cctggatgga cgaacaagcc attaagcagt 841 ggcattgcct ggtccaccat ggccgccgag ggagaggttt ccactacagt gacaccgcca 901 ttgagacggc cctgatgcta aaaggcttgt tcaagttgcc gctgcgggcg ctagaaggct 961 tcattaactc gttgttccaa ctgatggcgg tgcctttgca gtcgccggac tatagctgta 1021 tcagcaagcg cgccaagacc gtcgacatca agtaccgcct ccccagccaa ggcccggtgg 1081 ctcacttggt cattgatgcc accggcctca aggtctatgg cgaaggcgaa tggaaaattc 1141 gcaaacacgg caaggagaag cgacgagtgt ggcgcaagct ccacttggcg gtggatgcca 1201 caacccatgc ggtcatcgct gccgaagtca gcctggagac ggtggcggat aacgaggtgt 1261 taccgacgtt gctcaacccc ttacgacgca agataaaaca ggtcagcgcc gatggtgcgt 1321 atgacaccaa ggcctgtcat gcgctactga agaaaaaggg ggcgaaagcc accataccgc 1381 cgagaaaaaa tgcggcaccg tgggaggaag gccatccccg caacgaggcg gtgacggcgc 1441 tcaaggccgg tgaactgaag caatggaaga aagactccgg ctatcaccag cgctcgatag 1501 ccgagaccgc catgtaccgg ttcaagcaac tcatcgggcc aacgctgagc ctgcggaact 1561 acaacgccca ggtgggcgaa atcctggctg gcgtgaaggt gatgaacaag ctgatagggc 1621 ttggtatgcc tgttcgccag ccagtgaatt gagtggtatc aacgggttgg ggaacggcca 1681 tccagcgacg gatttggtca acaacgccga taacacctcg aaatcggagt ttatatggct 1741 tcgtggggga gttatgtgtt tgagctttgt cgcattaacc gcgaatcacg gggttgacgg 1801 cagaaatgga ctggaattac acttcttaga gtcggcgttg cccggaaaat tctgattgga 1861 ttagttgttc ggggtgcgaa aacagtcgta gttcggggga aaaaccgaat tttgacccga 1921 aaccgcaaaa aacccgaaat gacagttcct atcaaatact taacttgtag gttctttcaa 1981 atggataaga atgatgttgt taagaagata cttgaatcaa aaaagtacga aaaccttgat 2041 tcagatattg ttgaaaaggt tgtttccatt tctgagaaga aatataaatt aaaggaagtt 2101 gagaattatt ctaaaaagaa attgcatcaa atatgggggt cttactattc tgcctatcct 2161 aattgggata aattattaaa aaagtacaat caggggcagt tatcaataga agatttacta 2221 aagattcatt cttcgacgaa tgaaagagtc gcaacattaa atgactttta cacttatgta 2281 tttggaaata tcaaacatgt ctcatctatt ttagattttg gttgtggctt caatccatta 2341 gctttatacc aatggaatga aaatgaaaaa ataatatatc atgcatacga tattgataga 2401 gctgagatag cttttttgag tagcattatt gggaagttaa agacgacgat aaagtatagg 2461 tttttgaata aagagagtga tgtctacaaa ggtacttatg atgtagtatt ccttttaaag 2521 atgcttcctg tgctaaaaca gcaagatgta aatatcttgg atttcctaca gctttttcat 2581 actcaaaact ttgtaatatc ttttccaata aagtctttat ctggaaagga gaagggaatg 2641 gaagagaatt accagctatg gtttgaatct tttacaaaag gttggataaa aatccttgat 2701 tcgaaggtta tagggaatga gttagtatat attactagtg gatttcagaa ataacggcac 2761 tgttgcaaat agtcggtggt gataaactta tcatcccctt ttgctgatgg agctgcacat 2821 gaacccattc aaaggccggc attttcagcg tgacatcatt ctgtgggccg tacgctggta 2881 ctgcaaatac ggcatcagtt accgtgagct gcaggagatg ctggctgaac gcggagtgaa 2941 tgtcgatcac tccacgattt accgctgggt tcagcgttat gcgcctgaaa tggaaaaacg 3001 gctgcgctgg tactggcgta acccttccga tctttgcccg tggcacatgg atgaaaccta 3061 cgtgaaggtc aatggccgct gggcgtatct gtaccgggcc gtcgacagcc ggggccgcac 3121 tgtcgatttt tatctctcct cccgtcgtaa cagcaaagct gcataccggt ttctgggtaa 3181 aatcctcaac aacgtgaaga agtggcagat cccgcgattc atcaacacgg ataaagcgcc 3241 cgcctatggt cgcgcgcttg ctctgctcaa acgcgaaggc cggtgcccgt ctgacgttga 3301 acaccgacag attaagtacc ggaacaacgt gattgaatgc gatcatggca aactgaaacg 3361 gataatcaac gccacgctgg gatttaaatc catgaagacg gcttacgcca ccatcaaagg 3421 tattgaggtg atgcgtgcac tacgcaaagg ccaggcctca gcattttatt atggtgatcc 3481 cctgggcgaa atgcgcctgg taagcagagt ttttgaaatg taaggccttt gaataagaca 3541 aaaggctgcc tcatcgctaa ctttgcaaca gtgccataat tttcatgaag aaatggtgga 3601 gcagtacggg cgcgttcgtc gtttcctgcc ccatctgctg aataccgtta aattttcatc 3661 cgcacctgcc ggggttacca ctctgaatgc ctgtgactac ctcagccggg agttcagctc 3721 acggcggcag ttttttgacg acgcaccaac ggaaattatc agtcggtcat ggaaacggct 3781 ggtgattaac aaggaaaaac atatcacccg caggggatac acgctctgct ttctcagtaa 3841 actgcaggat agtctgaggc ggagggatgt ctacgttacc ggcagtaacc ggtggggaga 3901 tcctcgtgca agattactac agggtgctga ctggcaggca aaccggatta aggtttatcg 3961 ttctttgggg cacccgacag acccgcagga agcaataaaa tctctgggtc atcagcttga 4021 tagtcgttac agacaggttg ctgcacgtct ttgcgaaaat gaggctgtcg aactcgatgt 4081 ttctggcccg aagccccggt tgacaatttc tcccctcgcc agtcttgatg agccggacag 4141 tctgaaacga ctgagcaaaa tgatcagtga tctactccct ccggtggatt taacggagtt 4201 gctgctcgaa attaacgccc ataccggatt tgctgatgag tttttccatg ctagtgaagc 4261 cagtgccaga gttgatgatc tgcccgtcag catcagcgcc gtgctgatgg ctgaagcctg 4321 caatatcggt ctggaaccac tgatcagatc aaatgttcct gcactgaccc gacaccggct 4381 gaactggaca aaagcgaact atctgcgggc tgaaactatc accagcgcta atgccagact 4441 ggttgatttt caggcaacgc tgccactggc acagatatgg ggtggaggag aagtggcatc 4501 tgcagatgga atgcgctttg ttacgccagt cagaacaatc aatgccggac cgaaccgcaa 4561 atactttggt aataacagag ggatcacctg gtacaacttt gtgtccgatc agtattccgg 4621 ctttcatggc atcgttatac cggggacgct gagggactct atctttgtgc tggaaggtct 4681 tctggaacag gagaccgggc tgaatccaac cgaaattatg accgatacag caggtgccag 4741 cgaacttgtc tttggccttt tctggctgct gggataccag ttttctccac gcctggctga 4801 tgccggtgct tcggttttct ggcgaatgga ccatgatgcc gactatggcg tgctgaatga 4861 tattgccaga gggcaatcag atccccgaaa aatagtcctt cagtgggacg aaatgatccg 4921 gaccgctggc tccctgaagc tgggcaaagt acaggtttca gtgctggtcc gttcattgct 4981 gaaaagtgaa cgtccttccg gactgactca ggcaatcatt gaagtggggc gcatcaacaa 5041 aacgctgtat ctgcttaatt atattgatga tgaagattac cgccggcgca ttctgaccca 5101 gcttaatcgg ggagaaagtc gccatgccgt tgccagagcc atctgtcacg gtcaaaaagg 5161 tgagataaga aaacgatata ccgacggtca ggaagatcaa ctgggcacac tggggctggt 5221 cactaacgcc gtcgtgttat ggaacactat ttatatgcag gcagccctgg atcatctccg 5281 ggcgcagggt gaaacactga atgatgaaga tatcgcacgc ctctccccgc tttgccacgg 5341 acatatcaat atgctcggcc attattcctt cacgctggca gaactggtga ccaaaggaca 5401 tctgagacca ttaaaagagg cgtcagaggc agaaaacgtt gcttaacgtg agttttcgtt 5461 ccactgagcg tcagacccct acaccgacac ggccggcttc accgatcacg tctttgccct 5521 gatgcacctg ctaggcttcc gcttcgcgcc gcgcatccgc gacctcggcg aaaccaagct 5581 gtacgtgccg cagggcgtgc aagcctaccc gacgttgcgc ccgctgatcg gcggcaccct 5641 gaacatcaag cacgtgcgtg cccactggga cgacatcctg cgcctggcca gctcgatcaa 5701 gcagggcacc gtcaccgcct cgctgatgct gcgcaagctc ggcagctacc cgcgccagaa 5761 cggactggcc gtggccctgc gcgagctggg ccggatcgag cgcacgctgt tcatcctgga 5821 ctggctgcaa agtgttgaac tgcgccgccg cgtgcatgcc ggcctgaaca aaggtgaggc 5881 gcgcaactcg ctggccaggg cggtgttctt caaccgcctt ggggaaatca gggatcggag 5941 cttcgagcag cagcgctacc gggccagcgg cctcaacctg gtgacggcgg ctatcgtgct 6001 gtggaacacg gtgtacctgg aacgcgccac ccagggggtg gtcgaggccg gcaagccggt 6061 ggacggcgag ctgctgcaat tcctgtcgcc gctgggctgg gagcacatca acctaaccgg 6121 cgattacgtc tggcggcaga gccgcagact ggaagacggg aagtttcggc ccttacggat 6181 gcccggaaaa ccttagcgta cgattttttc cgaattctgc gggctcccct ttaagatttt 6241 ggcaagcagt agcgtcctct ggttacccat gaacatggta atacgggaaa aaccatacca 6301 acttatggtc gctttgattg ctttatatac ggccatccct gttgttacaa tagtaatttt 6361 atctggtcag caatcgcata agttggaact aattgctgtg catttcatta catttatcac 6421 gatggtgttt gttttgcgtc gtaagatggg gaaacgttgg ctggatttat ttgaagaaaa 6481 attagccatt tataaaccta atgataaact cgcgcttagc gaattacacg aaagcatacg 6541 tgagaaaaat gggctagact tgcaggatct acaagattgg tactggaaag agaagatgac 6601 atatgcgtat cacaaagaac ataaaacaac cataagctat caaaaattca agtagcattt 6661 taaaatgtca ggggagggct attgtgattt attaagtcgg caaggttatt aggtaggggt 6721 gttcaatatg ataaattctt cgagtgtggt tatttcaaga gttgttctgg tcctttgaga 6781 tagctaatta tcattacaga ctttatcgaa aggtatgaat tatgaacatt accgacaaag 6841 aacttagctc aaatacagtg agtcagtatg gatggaactt aggagagttc aatcactcaa 6901 cgccttttac atctcatttt atttatatta ccgactatca taaagataat acatggatga 6961 tttcactttc gcaggaggat tttaatacga ccaaaatttc aacatcgtta agtctagatg 7021 cctgtgtgtc catgctcgga aagatactaa aaaaaatgtc taacaaaatc ggtatctcac 7081 aaacggaaga atctgaattc gcatttcttt taacaaacta tattaaacaa actttgactt 7141 ttagagaatg gcaacgcaat gctgaaggaa atcaacgact gcactttctt attaatatct 7201 acggtgcaaa agaagacggt ggcgaagtgg ttttaagacc atttattgta aatcctgatg 7261 aattaatgct tactccagcg gatgtcgttg aatttaattc gcaggttatc aaagttgatc 7321 ggcagcgtca tcctgagtgg ttccgttaac aggtcacaag ggttaagagc ctgaaaggct 7381 gcgatagggt atacgcagcc tattctgtat agccgtcgcg taataattgt tctaaatgac 7441 tatcgaccgt ttcctgatca ccaggaatat atcgaggcca tcctgttata tcgttggcga 7501 gtttcactat gtatggatga aacccaaact gttcggaagt gatgtcaata taatattgca 7561 cttcttcgaa attcaactca caccaataat ggccaaagcc accacactct ataaatatac 7621 cgccatcatc tgcaccgtta cccccacgga caacagcatc tagaccttta gtttttgcta 7681 aataacacac aagatagctt gcaaaaaggc aagtgcctgc cgtcttctct atgccgcact 7741 ccgttaaaat tgaaagtagc ttttcatgcg ccactcttgc aatgtctgat accaattccg 7801 gggacatgtt agctccagtg aaattgttag atcgacttaa acagataata actcaatatt 7861 ttcatgaagt acttgtgggt tcttaaacca atagccggaa ccacacatcc aaggttcacc 7921 tgggaaaaca aaaccttctt gaataaggta tttgcggaat aggggaggca gtacattttc 7981 aattttcaaa atgtaatttt gttcatctgc aatacatttc aattctgcaa gaagcgctct 8041 aaaaatgcct gtgccgggct ctttaactga gatagttgaa acaaccatga ccggatatcc 8101 caggaccgaa cacatgcctg ctcttgcccg gatgtagagc tcctcgaaat ggtgtaagcc 8161 gtgtacatga gaagacctta tgggtatctt accatctgat gcctgcgtta taaggtcggc 8221 gaaaaccttt ttgattttca gcaaatctgc ctgaaaattt tgatcgttca aaggaaaatc 8281 agattgagaa tttgtcatta catatcttat gttttaaaaa cttaactttg ataaagcaaa 8341 ggaatacgct gatcgtcatg tgatccaaat tgagcaatga attttaattc ggaacagcta 8401 aagacaaagc agtagggtgc aataattcag gatgtcgata ctataagaag aatagtggta 8461 tgaatgtagc aattacctca atatgagggg ggcaactgtt gatgctgtac atacatacag 8521 tatttaacat aatctttgtt atatgtactt ataaatcaat gacataaggt ttaaagatcg 8581 tatgatctac gcactaggtc atggcttgta atgagtgaaa aaaggttcaa gattttagag 8641 aaatgctccc aagatcaaca tggcggcata agttttccag cttgaccaat caatcgtgga 8701 accaagcaac agatagaatg ccaggcctac cagccccagc tttactacta tcccaattaa 8761 tatggtaaag atagactcat cgcgttcgcc tttaagtaat ttacaacgcg taattagatc 8821 gtcttttttc atgtagaatc ccttagagtt attaaagtcc tgcattagaa gttgttacct 8881 gccgaagtta cctcgtatga gttaactgtg gctccaaaca tacaaaatat aagctgtgcc 8941 aattgaaagg attagaaaag cacagttact aataaaatct actaatgctt gtagcttctt 9001 tagtctcact attgctggac cgtgttcagt agaggtacta ctcagccctt ttgttctggc 9061 actctctgct tttctgaaaa aattgtaatg caatcctgac cgcaagcaaa accatgccaa 9121 accagtcgtt attacgatat ttatgtagaa agcatattga atcatttgtt cagtttcgaa 9181 gctt //