LOCUS       HG524481                 363 bp    DNA     linear   BCT 02-JUN-2016
DEFINITION  TPA: Escherichia coli str. K-12 substr. W3110 tmRNA gene
            Esche_coli_K12.
ACCESSION   HG524481
VERSION     HG524481.1
DBLINK      BioProject:PRJEB4570
KEYWORDS    RNAcentral; Third Party Data; TPA; TPA:specialist_db.
SOURCE      Escherichia coli str. K-12 substr. W3110
  ORGANISM  Escherichia coli str. K-12 substr. W3110
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 363)
  AUTHORS   
  CONSRTM   The tmRNA Website and RNAcentral
  JOURNAL   Submitted (13-SEP-2013) to the INSDC.
REFERENCE   3
  AUTHORS   Gueneau de Novoa P., Williams K.P.
  TITLE     The tmRNA website: reductive evolution of tmRNA in plastids and
            other endosymbionts
  JOURNAL   Nucleic Acids Res. 32(Database issue), D104-D108(2004).
   PUBMED   14681369
COMMENT     Specialist DB   : The tmRNA Website
            URL             : http://bioinformatics.sandia.gov/tmrna
PRIMARY     TPA_SPAN            PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-363               AP009048.1         2754249-2754611     
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Escherichia coli str. K-12 substr. W3110"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:316407"
     tmRNA           1..363
                     /gene="tmRNA Esche_coli_K12"
                     /product="transfer-messenger mRNA Esche_coli_K12"
                     /note="Tag:(A)ANDENYALAA**"
                     /note="ECO:0000305"
                     /note="SO:0000584"
                     /note="GO:0070929"
                     /tag_peptide=90..122
     CDS             <90..122
                     /transl_table=11
                     /gene="tmRNA Esche_coli_K12"
                     /product="proteolysis tag peptide encoded by tmRNA
                     Esche_coli_K12"
                     /note="first codon is 'resume', not start"
                     /db_xref="UniProtKB/TrEMBL:V6C7F2"
                     /protein_id="CDI35886.1"
                     /translation="ANDENYALAA"
     misc_feature    361..363
                     /note="CCA tail position"
BASE COUNT           96 a           90 c          102 g           75 t
ORIGIN      
        1 ggggctgatt ctggattcga cgggatttgc gaaacccaag gtgcatgccg aggggcggtt
       61 ggcctcgtaa aaagccgcaa aaaatagtcg caaacgacga aaactacgct ttagcagctt
      121 aataacctgc ttagagccct ctctccctag cctccgctct taggacgggg atcaagagag
      181 gtcaaaccca aaagagatcg cgtggaagcc ctgcctgggg ttgaagcgtt aaaacttaat
      241 caggctagtt tgttagtggc gtgtccgtcc gcagctggca agcgaatgta aagactgact
      301 aagcatgtag taccgaggat gtaggaattt cggacgcggg ttcaactccc gccagctcca
      361 cca
//