LOCUS HF935395 79977 bp DNA linear CON 17-SEP-2015 DEFINITION Pyronema omphalodes CBS100304 genomic scaffold, Pcon_v1_scaffold344. ACCESSION HF935395 CATG01000000 VERSION HF935395.1 DBLINK BioProject:PRJNA65573 BioSample:SAMEA3146335 KEYWORDS . SOURCE Pyronema omphalodes CBS 100304 ORGANISM Pyronema omphalodes CBS 100304 Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Pezizomycetes; Pezizales; Pyronemataceae; Pyronema. REFERENCE 1 (bases 1 to 79977) AUTHORS Nowrousian M. JOURNAL Submitted (05-APR-2013) to the INSDC. Nowrousian M., Dept. of General and Molecular Botany, Ruhr-Universitaet Bochum, Universitaetsstr. 150, D-44801 Bochum, GERMANY. REFERENCE 2 AUTHORS Traeger S., Altegoer F., Freitag M., Gabaldon T., Kempken F., Kumar A., Marcet-Houben M., Poggeler S., Stajich J.E., Nowrousian M. TITLE The genome and development-dependent transcriptomes of Pyronema confluens: a window into fungal evolution JOURNAL PloS Genet. 9(9), e1003820-e1003820(2013). PUBMED 24068976 FEATURES Location/Qualifiers source 1..79977 /organism="Pyronema omphalodes CBS 100304" /strain="CBS100304" /mol_type="genomic DNA" /tissue_type="vegetative mycelium" /note="Pcon_v1_scaffold344" /db_xref="taxon:1076935" gene complement(20..1620) /locus_tag="PCON_07783" /product="Similar to hypothetical protein [Tuber melanosporum Mel28]; acc. no. XP_002837860" mRNA complement(join(20..1388,1436..1620)) /locus_tag="PCON_07783" /product="Similar to hypothetical protein [Tuber melanosporum Mel28]; acc. no. XP_002837860" CDS complement(20..1345) /locus_tag="PCON_07783" /product="Similar to hypothetical protein [Tuber melanosporum Mel28]; acc. no. XP_002837860" /db_xref="EnsemblGenomes-Gn:PCON_07783" /db_xref="EnsemblGenomes-Tr:CCX29964" /db_xref="GOA:U4LCY5" /db_xref="UniProtKB/TrEMBL:U4LCY5" /protein_id="CCX29964.1" /translation="MTIPSGTPTGGHSSSYDTYDPESGLTESTLRPVLLRSHSRRSAA SVNSHHSSFPFPSPTSLFPPTPFHPTPFPPTPFPPPPPPPPSLRYDSHTRDSTPVSGD GSNNGLPRSHSTHSHTSHTSAASHESAPSAPSAVVVPGASATAASAKSSSSETTIKPQ PSITSHAYSLATSDFDRPLFDYRILAASMHAYRHLSIFRRFGRLSMANLLSYQDELTE LEASLRVLNNPDTGARAGAAESDPAETRRQLMRKLRGLLKDYYETLLLQEQIFTLDPP RDSDVAVLGDLAPAYPSGGGVVEVDQHIDDLVSLGLGERDSLEKLVGRYIPSLFPGRV ASVEDLRQRNRSARDVAGLFNPFTRRVTRLVIALGTAAMMLAPMVVLSVVKEERWKLG VVAGCTMLLAVAVALGTRGRGGEIVMVISAYAAVLVVFVQGDCGGRAGG" gene complement(1794..5323) /locus_tag="PCON_07784" /product="Similar to Putative endo-1,3(4)-beta-glucanase 2; acc. no. Q09850" mRNA complement(join(1794..2070,2123..2370,2423..2912, 2974..3249,3300..3561,3611..4778,4832..5323)) /locus_tag="PCON_07784" /product="Similar to Putative endo-1,3(4)-beta-glucanase 2; acc. no. Q09850" CDS complement(join(2048..2070,2123..2370,2423..2912, 2974..3249,3300..3561,3611..4778,4832..5184)) /locus_tag="PCON_07784" /product="Similar to Putative endo-1,3(4)-beta-glucanase 2; acc. no. Q09850" /db_xref="EnsemblGenomes-Gn:PCON_07784" /db_xref="EnsemblGenomes-Tr:CCX29965" /db_xref="GOA:U4LKS7" /db_xref="InterPro:IPR005200" /db_xref="InterPro:IPR040451" /db_xref="InterPro:IPR040720" /db_xref="UniProtKB/TrEMBL:U4LKS7" /protein_id="CCX29965.1" /translation="MWASKLIPLLLSVSLLCPNVASFPAPQAPSNNVNIEQISAAPAN ANPAPVIAPTPISGAIITSESQKQPSDSNSDSGSVSAEVVQLAPGPTATIEEPPHSTD HISVQTITRSDKIIQIPEKPTETPNPRTLGFINSELDTRGNPSVIPFATADPRKEGSL DTAFTKTIHSTSYRSTATVAATIAPAMAHARRYAQPEAEHMNFHPIRQNVDDIMKPIA TSAPSSLFPRRDTHPVAKPPMPDSETGKPVHTNKFYANMMIGSRNNPVFTFPYEVWWS NQENVTWGLAFDHREPELRAYGPPEQPSGAIKWYVNPIYIRSLQIGAAEFTRGQSTME MSNFAGQSVDTVFYADPAKSKTTGKMEVTLAQGMGFISARYTELTPVLDTSVFVRSMT QVNNFVGAVLGATKYRITLENGAIWVLYAFADLGSQPLKLDVINNGRIGTDKLFSGLI QVAKLSKTTAGDPAVEAILDSAAGAWVKSVSVSASVAGDVGKYQFNYERKGVGYAELL MFALPHHLESFDSATAGKVKSAYTLISPTKGTQVAVVANQWTMIERGLPTSIGWLPVK EGAPATFSPAALNRISAVAKYEMQQDFSALSDLDNMYFSGKALAKFGLMCLSTSLVLN DVDLTRTCQVKLKAAFQRFAENKQQNGLVYETSWRGVLSDAVYKTGDPNSDFGSGFYN DHHFHYGYFIQTAAIIGFLEKRHFSTTGSWLKANQEWVNTLVRDTANPSAADPYFPVS RSFDWYHGHSWAKGLFESFDGKDEESSSEDYNFAYAMKLWGNVIGDAAMEARGNLMLG IMKRSMNSYMLLSTGNRNHPEGFVPGKITGILFENKVDRTTYFGNVVQYIHGIHMLPL TPISPYVRLNSFVREEWDLYFKGNTGNIDDGWKGVLYANYAMLDPKGAFNFFNAATFQ NKWLDGGASRTWYLVFAGGLGGATI" gene complement(8020..8327) /locus_tag="PCON_07785" /product="Protein of unknown function" mRNA complement(join(8020..8186,8237..8327)) /locus_tag="PCON_07785" /product="Protein of unknown function" CDS complement(join(8148..8186,8237..8245)) /locus_tag="PCON_07785" /product="Protein of unknown function" /db_xref="EnsemblGenomes-Gn:PCON_07785" /db_xref="EnsemblGenomes-Tr:CCX29966" /db_xref="UniProtKB/TrEMBL:U4LRP7" /protein_id="CCX29966.1" /translation="MTSRAQTRLRYDKHN" gene complement(9300..10169) /locus_tag="PCON_07786" /product="Similar to Aminopeptidase N; acc. no. O57579" mRNA complement(join(9300..9608,9669..9742,9796..10169)) /locus_tag="PCON_07786" /product="Similar to Aminopeptidase N; acc. no. O57579" CDS complement(join(9489..9608,9669..9742,9796..9892)) /locus_tag="PCON_07786" /product="Similar to Aminopeptidase N; acc. no. O57579" /db_xref="EnsemblGenomes-Gn:PCON_07786" /db_xref="EnsemblGenomes-Tr:CCX29967" /db_xref="GOA:U4LEI9" /db_xref="UniProtKB/TrEMBL:U4LEI9" /protein_id="CCX29967.1" /translation="MEGWNWRMGIRRAMVYCVCVGAGGETIWSLFWNRFNRINFHAEH TSSTRTTDICGIMVLQQYAQLEIAVTFIVKELQVHPNELYRRLQNISLTVDP" gene complement(10363..14155) /locus_tag="PCON_07787" /product="Protein of unknown function" mRNA complement(join(10363..13490,13544..13642,13701..13775, 14145..14155)) /locus_tag="PCON_07787" /product="Protein of unknown function" CDS complement(join(13312..13490,13544..13592)) /locus_tag="PCON_07787" /product="Protein of unknown function" /db_xref="EnsemblGenomes-Gn:PCON_07787" /db_xref="EnsemblGenomes-Tr:CCX29968" /db_xref="UniProtKB/TrEMBL:U4LDN4" /protein_id="CCX29968.1" /translation="MSPKKSYWTWRIMHVRHLFVQHRQPTFKGFRLYFELIQSHKTAS QTAARYGKQVVQQQQHQLSSSRSTLETQVPK" gene complement(14594..15481) /locus_tag="PCON_07788" /product="Protein of unknown function" mRNA complement(join(14594..15157,15209..15481)) /locus_tag="PCON_07788" /product="Protein of unknown function" CDS complement(join(14804..15157,15209..15346)) /locus_tag="PCON_07788" /product="Protein of unknown function" /db_xref="EnsemblGenomes-Gn:PCON_07788" /db_xref="EnsemblGenomes-Tr:CCX29969" /db_xref="GOA:U4LCY7" /db_xref="UniProtKB/TrEMBL:U4LCY7" /protein_id="CCX29969.1" /translation="MWADDELTLIVVLANLLSAIWTYFVIVFSFDQQSAGYKFIHREL AWYALWYSCQTYAFLVSTTNLSIAVYISLRVRDGLKERFKTTGTTRRIAWALIILLLA AAVMVACFIPWRMTLWDVELGDGESVERMEKIVGKAMETLGGRVDCQWDPRGRCRWVE GLK" repeat_region complement(16686..16939) /note="repeat family Unknown" gene complement(17015..18361) /locus_tag="PCON_07789" /product="Protein of unknown function" mRNA complement(17015..18361) /locus_tag="PCON_07789" /product="Protein of unknown function" CDS complement(17015..18361) /locus_tag="PCON_07789" /product="Protein of unknown function" /db_xref="EnsemblGenomes-Gn:PCON_07789" /db_xref="EnsemblGenomes-Tr:CCX29970" /db_xref="UniProtKB/TrEMBL:U4LKT2" /protein_id="CCX29970.1" /translation="MLRSPSPTNHDLTSNSFLEQPVEDLVLLHSVNSLLALVSLPTLH NILDATPYLLILLYEALSPPKRVPFVKRKHSNADFGTRLRNLKLLVGTIAHDEDLHLS RNASRRLAELDLAGFCEKDTDATRSLLTLMVEVLDSLRPQQTKLLEQSVRGGLNQVLR ETRPEGVPEELLDEISAGIADLLPQSGPKLAAPGEDSDEDSADDNGSESSWAAPQYRH MQLPIPPTLLPLPPSRTASPASHAVQDEVDESDISLLPLPPSPPSKSQYLSMKGSSFL SRRSESIPTSGTTLRPPRSIPGSSPGSRRHSLMSRSPKPTKKLLGTSTAGSGDETDRT SQMSVSPASWGADSDYTAQLRRKRDEALERLRLAEERFQRQVDKKATAAPVNDYDDSH KSEHTWRSSRSGSIIGYGDVEEELDAVQQDGTVQVEKLEELVKTLLVRRGYRVSRQ" gene complement(21638..24974) /locus_tag="PCON_07790" /product="Similar to hypothetical protein [Tuber melanosporum Mel28]; acc. no. XP_002837845" mRNA complement(join(21638..22854,22880..23495,23562..24006, 24056..24974)) /locus_tag="PCON_07790" /product="Similar to hypothetical protein [Tuber melanosporum Mel28]; acc. no. XP_002837845" CDS complement(join(22548..22854,22880..23495,23562..24006, 24056..24796)) /locus_tag="PCON_07790" /product="Similar to hypothetical protein [Tuber melanosporum Mel28]; acc. no. XP_002837845" /db_xref="EnsemblGenomes-Gn:PCON_07790" /db_xref="EnsemblGenomes-Tr:CCX29971" /db_xref="UniProtKB/TrEMBL:U4LRQ2" /protein_id="CCX29971.1" /translation="MDLNMIITKETDPRPSLRGTTYYTTSGTTAVTPHRPTGAMTPKS ISSTGDIKRVYFQLRDSNFYSKSVQFRPSDNTQSIYDTLRNLFGMGTCSDPLYGISFE YEDGVSFVPSYDNFTDRMIVYVRIERNVFKGARSYDSMESYPGPPAHPSRSVTPTVPP EDHRPRSASETTLPHELSNSRKRSERYDDGAIEDQQSWYTLRHHSPGSMHPEDDDSRY KAASVSSADISLENIVEGNRRKRLKFSSDDIPLYPPPGPQYRDGTSLSPTRQIPQLAT PYSIRNVNVSHTTPPYYSAYSHQQGCHYGPPAHPTPAPTIGSTMSDEDVALQLMNLGG YKTASTDINSARDDSILSDGGEYVDDGRSDTTELPEPLPPTISIPIQRGLPDSPILYP RNNNASYYNYAPRPVQEGEELELDEEVVSDASTARKDESDNEDADYEEDELDDLPIKY RKELHNHNQPVAPAPPVRKASLPAQPKAKPAASTLPKGIAKAAKRPSPISKPKKKASI SSASSKSPIKQQQEYPITPTSLPDSRKPSVASSASSSAGNTASKILSLPISNFPAMTT SVAPATESTLPPPLRRGRHQGQASLPALSQVQEGICHDAGIPDHECVSEDEVGTRRGR TAAAQAAKKTQGKSKKESSASVSASASVSSQQSQSQASTPAAATSFLPGSAAAVFAAA RALDQRQQPAKGKGKKKIVA" gene 26390..26971 /locus_tag="PCON_07791" /product="Protein of unknown function" mRNA join(26390..26644,26709..26971) /locus_tag="PCON_07791" /product="Protein of unknown function" CDS 26752..26856 /locus_tag="PCON_07791" /product="Protein of unknown function" /db_xref="EnsemblGenomes-Gn:PCON_07791" /db_xref="EnsemblGenomes-Tr:CCX29972" /db_xref="UniProtKB/TrEMBL:U4LEJ4" /protein_id="CCX29972.1" /translation="MHNGRWDENDGIKLGTGLGNAMDGVECYVSNYCC" gene complement(27420..27698) /locus_tag="PCON_07792" /product="Protein of unknown function" mRNA complement(join(27420..27481,27543..27698)) /locus_tag="PCON_07792" /product="Protein of unknown function" CDS complement(27560..27664) /locus_tag="PCON_07792" /product="Protein of unknown function" /db_xref="EnsemblGenomes-Gn:PCON_07792" /db_xref="EnsemblGenomes-Tr:CCX29973" /db_xref="UniProtKB/TrEMBL:U4LDN9" /protein_id="CCX29973.1" /translation="MRGVDGGRGVSLFRALISTLVVVTATRQQGCIRD" gene 27674..30496 /locus_tag="PCON_07793" /product="Similar to G2/mitotic-specific cyclin-4; acc. no. P24871" mRNA join(27674..27978,28128..29087,29146..29685,29756..30496) /locus_tag="PCON_07793" /product="Similar to G2/mitotic-specific cyclin-4; acc. no. P24871" CDS join(27967..27978,28128..29087,29146..29685,29756..29953) /locus_tag="PCON_07793" /product="Similar to G2/mitotic-specific cyclin-4; acc. no. P24871" /db_xref="EnsemblGenomes-Gn:PCON_07793" /db_xref="EnsemblGenomes-Tr:CCX29974" /db_xref="GOA:U4LCZ0" /db_xref="InterPro:IPR004367" /db_xref="InterPro:IPR006671" /db_xref="InterPro:IPR013763" /db_xref="InterPro:IPR036915" /db_xref="InterPro:IPR039361" /db_xref="UniProtKB/TrEMBL:U4LCZ0" /protein_id="CCX29974.1" /translation="MEAKTRPTRSTRVRHDENHVALKTKNSNITVKGDKAVGGLKVAP ARRQAFADVSNKVGPAKAINKESGKNIVVQEKETRGLGLKQPAQRISIPKNAVAKPAV NKSAISNQTAHTQAAAARRVTRRTTVYEDNKPAVAPVKRADPKKAVPGPKVSRDAVTK REVPRPTAVRNQAPIRPIARVKQQKIKEDEPVYSDQQPHLFDNDYPAYEEDNAVEDDD DEEASEDEQDPIIEAKARFNNDVEPVSEDEAHSDDDETNYTAVRRAGDNTTGVVPVLV PRWTTKSKKEIQKLNEEFGGLHDEDEEADISMVAEYGDEIFEYMRELEKKLLPNAHYM DFQSEIQWSMRAILMDWLVQVHTRFNLLPETMFLCQNYIDRFLSAKVVSFGKLQLVGA TALFVAAKYEEINCPSVHEIVYMVDNGYTAEEILKAERFMLSMLNFELGWPGPMSFLR RVSKADDYDLETRTLAKYFLEITIMDERFVGSPPSFLAAGAHCLARHMLQKGEWTPAH TFYSGYTASQLEPLVHTLVECCENPKVHHHAVFQKFADKRYKRASLYVANWMAKDNVT AEA" gene 34517..39818 /locus_tag="PCON_07794" /product="Similar to Transcription elongation factor spt6; acc. no. Q4WWH6" mRNA join(34517..35032,35089..35283,35346..37073,37129..39141, 39313..39384,39444..39818) /locus_tag="PCON_07794" /product="Similar to Transcription elongation factor spt6; acc. no. Q4WWH6" CDS join(34862..35032,35089..35283,35346..37073,37129..39141, 39313..39384,39444..39512) /locus_tag="PCON_07794" /product="Similar to Transcription elongation factor spt6; acc. no. Q4WWH6" /db_xref="EnsemblGenomes-Gn:PCON_07794" /db_xref="EnsemblGenomes-Tr:CCX29975" /db_xref="GOA:U4LKT6" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR003029" /db_xref="InterPro:IPR010994" /db_xref="InterPro:IPR012337" /db_xref="InterPro:IPR012340" /db_xref="InterPro:IPR017072" /db_xref="InterPro:IPR022967" /db_xref="InterPro:IPR023319" /db_xref="InterPro:IPR023323" /db_xref="InterPro:IPR028083" /db_xref="InterPro:IPR028088" /db_xref="InterPro:IPR028231" /db_xref="InterPro:IPR032706" /db_xref="InterPro:IPR035018" /db_xref="InterPro:IPR035019" /db_xref="InterPro:IPR035420" /db_xref="InterPro:IPR036860" /db_xref="InterPro:IPR037027" /db_xref="InterPro:IPR042066" /db_xref="UniProtKB/TrEMBL:U4LKT6" /protein_id="CCX29975.1" /translation="MDYIEREASLDPEEDEEEFDEEAGENADAANGKKKRAEDFDSSE EEDDEDDEEEALRVREGFIVDDEDEDDDEDGEDGATVKVKRRKKRRRSHREEEEEDVL DEEDLDLVMENTGEGGRDNKSKFKRLKRGREEQRGRQESRGLNDIFSDDELDAPGDLD DDEREMYGGNNRRGDEFDDFIENDSSDDEDRRMGSGDERISRRRGAGRQVDPETLGLR AGAMNDMEDIFGLADYEDALVMADEAQEMEERTHDLQLKDVFEPSELQERLLTDEDNI IRNKDIPERFQLIRKPFENLEVSAEELHEEGTWIAHSLISKKRIDPDLEEPFIEAVRN VLRFLVVDNYEVPFISHQRKDYMIHAVKAPNRNFREGEPEYTLLSQRLIWEKDCWGIL DLDLKFRAFLEKRNSFKKTYNALRNKMGIPQDPMVEERLKQSTMPDQIQDLTDYLHFQ YHTQLKDLQASDSASRGHRRPGAGKTKFERIRLGRVYGLVRAFGITAEQFARNVEDSK KREFAEDPNRLPDVCADDYLDNDFPTSQNALLAAKQMLAEEIVTNPRMRNSLRVQWFT QAVIHVNVTEKGVKQIDEQHQYYEFKYLKEQGLPAIAGNPARYLKMLKAESDGLVELV FELQETNRLTRDLYEYITSENYSEIAEAWNRERKDVVDIALKKFAQIFTKSLRDELRT ACEDEIANAINEAYGKRLDQAPYKSKHMEEGETPRVFAFSNGHGEFGRDAIVGVFTDE YGKAVYTLKVDDLRNDENRQKVSEAIRARNADVIGVSGFSVQTNRLYEDLIKLVEEHD LTLPDINNERQPIDVVFVNDEVARLYQHSDRAKTDHPDLAPLLRYCAALGRYMQSPMH EYAALGKDIVSIAFHPAQNLLSDERIMKSLESAMVDTVNLCGVNVNDAVRDPYKANLL PYVSGLGPRKKDQLIKSISATGGRLVTRDQLMGDFDKGLPQIFGPKVFENCASFLIIS YDNPRDQEYLDSTRVHPEAYDLGRKMAADALDFDEEDVIHLTQTAGKGAVINKLINGN AYKLNELILEEYAEELERNFNQRKRATLETIRAELRESYEELRARYRLMSVDEIFTML TGETKDTLDEGMVVAVKIRRVTDRYVSARLDCGIEGNVSAEEMPMEALNIKPSHYYHV GQTVQARIESLSRKTFYAELSLREEKIRQPRRAHLDALPHEWDDEREEKDKARLAITN QEQTRTARVIKHPLFKPFNSRQAEEFLAGRSRGDAVIRPSSNGPDHIAVTWKVGDGIY QHIDVLELDKANEFTVGKTLRVAGKYSYSDLDELIVNHVKNMARKIDELCNNGKFQAG SKEDVEKWLEKYCEANPKRSAYAFALDAKRPGYFLLLFKANLKSNLGCWHVKVVPNAY QLRDTSYPEVVTLCNGFKTMYMHLEARQKAGRSGGMR" assembly_gap 39189..39274 /estimated_length=86 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 40893..42517 /locus_tag="PCON_07795" /product="Similar to hypothetical protein [Tuber melanosporum Mel28]; acc. no. XP_002839633" mRNA 40893..42517 /locus_tag="PCON_07795" /product="Similar to hypothetical protein [Tuber melanosporum Mel28]; acc. no. XP_002839633" CDS 40893..42386 /locus_tag="PCON_07795" /product="Similar to hypothetical protein [Tuber melanosporum Mel28]; acc. no. XP_002839633" /db_xref="EnsemblGenomes-Gn:PCON_07795" /db_xref="EnsemblGenomes-Tr:CCX29976" /db_xref="UniProtKB/TrEMBL:U4LRQ7" /protein_id="CCX29976.1" /translation="MSESYRPSYAKRTRSSSPPPRKRSPSSSRSRSRSRPIRRRRDPS LDRRDRDRDRDRSRDRSRSRDRDRYAPPRRRDWRDRSRSRSPVRRDRDRSRSRNRRRS RSRERLHVGYDSYRGSAGRKRSVTPLRRRSRRRSVTPPPRRRSRRRDSRDRRDRSESR VVDRSSPRGEKSSPVVRRKSLDVRTKDEEKEKAVKEKEKEKSEVEREKEKKDREAERE KEKKEREADWEMREKERKERERKERDEEREREREREREEAARREHDLREAKREKDAAI QRELEQQAELARKREEEQMRSKKESGEDIKQKELQKTKEQIETIQKDFKKRGHFDTIK KQVYAHFCGSDAVEELQKRLTEHTDSELNRDPSLRVRDRGKAAVLIERSAIQKGVYQI VEDKFKELLESRRTEIEAYMKELMVAQGILDPSDDLPSFDDDGRDEKEEGDEDVDMEN GSAEEKVNGNEIPEKKEAVGTKREEIKVKREEPADIEMTDRALVESH" gene 43302..52427 /locus_tag="PCON_07796" /product="Similar to Serine/threonine-protein kinase tel1; acc. no. Q4WVM7" mRNA join(43302..44693,44757..49736,49800..51819,51873..52427) /locus_tag="PCON_07796" /product="Similar to Serine/threonine-protein kinase tel1; acc. no. Q4WVM7" CDS join(43462..44693,44757..49736,49800..51819,51873..52316) /locus_tag="PCON_07796" /product="Similar to Serine/threonine-protein kinase tel1; acc. no. Q4WVM7" /db_xref="EnsemblGenomes-Gn:PCON_07796" /db_xref="EnsemblGenomes-Tr:CCX29977" /db_xref="GOA:U4LEJ8" /db_xref="InterPro:IPR000403" /db_xref="InterPro:IPR003152" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR014009" /db_xref="InterPro:IPR015519" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR018936" /db_xref="InterPro:IPR021668" /db_xref="InterPro:IPR036940" /db_xref="UniProtKB/TrEMBL:U4LEJ8" /protein_id="CCX29977.1" /translation="MVGSVLRLAVQCGVATIKAKTVPTIWKHILETLPSGDTLCEPIK VDYIKALKVLFQHMPHTEHLRRKEWEKIATFCLENVQSQLGAAGEGSQREPSSTPAGS RGRATARKQTTRIAKETREFLLCLRYLLAAPNAPILENRVQLCETLMQFLRTQQKIDQ AHQHVFYSLNCVLNVIAGNDLTLTYKVCDELVPIITRLWDTNTAGTKDQMIISLIHCR LHIKAQLRSHDSQRLRDNVGYLYEMLYNEYNTRATLTRDDREILQMDDVIFPSPTEKP DPEIPFRLKAIALRPGSVNDHKEEIWMVPQLIAMFVELLDASGNSDRIPHKKSTGGGD SPTRKRPRMYSRFGETMRYIRSIDVSRKLCALQVFTFLADLKAVDEDDFPSLVQDLIE ASKHENPTITGWALAAIGSCAFLTCASEPVHSGLWHQVWQLCARYASNQHVCRIASHI MRIIATKDLVAYSTISSSVESMVRNDDGNGPSIVTDSSLALWSYLLRKRNTMPQSVTF NANEQIFAWFNTHWHPEREGLSSNNVKAQSYSQKILPGDVIDFLAVCCGVKPSAIERR TPRICGPIGQACIRASRCRSLYVTLLNEDDDESDKTDSKYMDSSLSSGTENINAELQE LIVNMFEMRTKSVKDAWAAISSQHGGVTVAVLQNLVGYLLIAGTTLSMISGPGLIKAR QVDVKLREGLLQDFFTYVESKNCSLGQVTGIYLAIEGILPKNISEILDQNSVFHDFLR GTAGQFLAGISRVSGDKVTSQSLTREPERDDDGMDLDFPEDSKEEEKVESTTKNREQL EVFCSKEASWLTTSLLITLCSLAQGDTTREDICAVFVDSCLLKLTSDKTPLVGPLIRD FIITAGEDLPMDLTIDLFMQAAEDLIGKYNVEASEIGMTTGLDILTALAPRWVPANSD PDLRENCEIFFHTIIPLVKQGDDISYSVRVALGRLCEQILLIDPVYGKPTAPENEASQ PPSSRPPASSARNRRTQEEEPKKQDWWPRTLLIDLIEDPDLRVAYSAAHRMHVIFEVF GESQHLALTDMISQKLNSDPDWLEGLIIRVHAFGLMSHMSPTMVSRAIYRIFETGKIE EMGEYCARVLKTVARSAGLQNQRGLFRLFKDNLIYLFLKHYSSLNEVPYYVFGYKNFE DMCKDIPGDLVAHCFAHRKREDAEAVAQINGIPLQTLISDNFANVAAYALVWDAAVPA PRVQEGEAPQATLYSQLRKMFKDEKFAELIQTNFPQIIAIMFEMTQHEGTEAKFFDKE PDFGEARMHMEDIKAHGHLKHKVRITEPPVFPVKGIFGAIKFASNQITVDYREIWNPA MVVIVARRCFDSLHPARGPVHTLSVIRHIRLLISLAGRKVYEGYPLEMLIHGLKDYIT DTMCAEDTIGILQYLLENGKEYLCKKPPFLIGVFLSLLAAIRKSRQIPSTQMQSQEPQ LIDANSAIHMFSGWLKDHLAKCVFPRNQNEILHSIVRTALEFKQQGNAVHNSKESKLL KLLIDEDMKGSRSLLDPASRKLAFNLICSDFERPESYRDDIFGADKNSFTRANSLLRI SRNSNVNDGFLLWSARVLGRAYASTGQLHIDWTKEMEFHFPKRDPVLTAQIDKAPKVE IMKRLKELLLSDDKKVVSLAEKALSWIIDGEAQIQEENSMSVLTDEESKALYWGERPV EKPPTKQSITHAGELKGSFITWVNDLAIAMCTNVPGVPVLNCIRDVLKNVDGVAEELF PYITHILLAMDINQNPIAPPGLRDELSALFQHCFNNCEEKTVPHNTVLIKTVLYLRSQ QVVEGEASKAERDNWLALDYLDAAKAAATCKMFKTALLFAEIYSYEEKPAEIVNTSQR SRRESFQTKASEIIRLEVPTDLQLAIFENIDDPDAFYGIKQTFDLQTMMRNFEYEGDG LNMLWMQSASQQSKVSLGAPSSGSGLGLINAFNTLGMNDVSHSLLQTGASGSSSSPES ADNAYLSAWKLEQWDLPCPEVFDTRSAQIYRALQSVNKTVGSRSVALRMDPHILSVMK QIKDGTRTGHALGDRMKTLAMLTEMEEVFISQSHEQLEEVCENMKRRTAWMETGTYSD VEEMLALRQVAFGSLSKRDHLRIHANLEPKQARLFEAEALVSSCKMARKHIALHHALS AAVKLSDIVQPCKEIGLDISGVATLQAANVFWEKGQLVPSIRMLASLENDKASASQTM AVGRAKLLAKLGNRISEARLEQPDTIMSTYLERAIRALRGNEHGSEPGRVFHEFAKFC DQQLNDRSNTEDLERRTKLLDESRGDVDELMSLNSKVPSTARTPKTNQALQRELFKAK AWLALGEQEYVRLKAARDAFVEKSIFNYLKCLIACDDYDEDAVRFCSLWFEYYLMDRA NDAASILDQVPSRKLAPLINQLSSRLLKEESKFQELLRKLMVRVCADHPFHAVYQLVA IAKTKAQDDAAVSRSKAAKLVLHTLKENNKGKMVSTVIVPAILTTASEYEILAHARTD KKKDGSRVSLAKLLSTQKRDSKMWETGIPDLGIPPPTMDIPIRADCDYSLVPRIRRFD QYATIADGLSAPKIIKCEADNGMVYKQLVKGGNDDLRQDAIMEQVFEQVSSVLQKGRT SRQRDLKIRRYKVIPLSATSGIIEFVANTIPLHDWLAPAHRKYHPNDLEFMTCRKIIS DAAKKTRRDREKAFETVMRGFNPVMHYFFMHEFSGPDAWYTSRLAYTRSTAAISMLGH VLGLGDRHLNNILLDKGTGEVVHIDLGIAFEQARILPVPEVIPFRLSRDIVDGMGING TEGTFRRCCEFTLEVLRNESYRVTTILDVLRYDPLYNWTVSPHRMKRIQESHLERSDV SRKGEQGSKSDGEGELEAKRALAVVADKLSKTLSVEATVNGLIQTAMDPRNLAVLYCG WSAYC" gene complement(52437..52735) /locus_tag="PCON_07797" /product="Protein of unknown function" mRNA complement(join(52437..52555,52618..52735)) /locus_tag="PCON_07797" /product="Protein of unknown function" CDS complement(join(52542..52555,52618..52660)) /locus_tag="PCON_07797" /product="Protein of unknown function" /db_xref="EnsemblGenomes-Gn:PCON_07797" /db_xref="EnsemblGenomes-Tr:CCX29978" /db_xref="UniProtKB/TrEMBL:U4LDP4" /protein_id="CCX29978.1" /translation="MALFAFTHNGGLMKLVIT" gene 53350..55290 /locus_tag="PCON_07798" /product="Protein of unknown function" mRNA join(53350..53759,53822..55290) /locus_tag="PCON_07798" /product="Protein of unknown function" CDS join(53350..53759,53822..55229) /locus_tag="PCON_07798" /product="Protein of unknown function" /db_xref="EnsemblGenomes-Gn:PCON_07798" /db_xref="EnsemblGenomes-Tr:CCX29979" /db_xref="UniProtKB/TrEMBL:U4LCZ6" /protein_id="CCX29979.1" /translation="MAAIPFGFGVGDFFAVGSIALKLYYAYKEIPSNFKSLCDELFKV SVTLNELEKDSKDPNSLFRHFRDSRKKSLKKTISHIQKELLKLKEFREKNIGIATGDR LKRIKQMLKGDFSEKKKVLQDCMEKIKLYKAEAATASILSFDSSLLGLEKGQERLRQE IAKAQEQQTRDMNQKFAMMSQVMEQITRSNTDQFLKPPNSAMILSPKRHRSARETEEQ VDGIINAIGNNTRNGIRKEELEENREFIRALVKFKDESANPLHLDTSSCKATRSASPT TPVTPLTPLSDTSLMDYIEEKQDQERRSRSCSTTPLPEFRIHDPMLEDEDEEELRPRA ITPALSDVSLMDYIREKQEEERTKPSPQIASKQKQEEEEPKQTPQAKSEQKQGLAYIH GRREQERAKGKDWMTEEPRQGVKRKRTWELMEEKAAAVEEPSDGYSKRRRDTINMTFR PKPPQRKNSMADCAKNQKKEEDMLKKREQETRMKRQEDTHKKSEDNTRKTRVEYVSKK REEDTRKKKAWEEEPKIGVTRKRTLDVAEVESDKVMHVEPGQRKKASAKSRKHKVHDE VIEVQVGFKFVGKILIGKSVNDIVDGEIEKVERNRRRWA" repeat_region 55785..56013 /note="repeat family Unknown" gene complement(56084..56343) /locus_tag="PCON_07799" /product="Protein of unknown function" mRNA complement(join(56084..56197,56251..56343)) /locus_tag="PCON_07799" /product="Protein of unknown function" CDS complement(join(56103..56197,56251..56266)) /locus_tag="PCON_07799" /product="Protein of unknown function" /db_xref="EnsemblGenomes-Gn:PCON_07799" /db_xref="EnsemblGenomes-Tr:CCX29980" /db_xref="GOA:U4LKU0" /db_xref="UniProtKB/TrEMBL:U4LKU0" /protein_id="CCX29980.1" /translation="MLLTTAIARWIGMVITLLGRNAILLEEILRWLMYVG" gene complement(60168..61410) /locus_tag="PCON_07800" /product="Similar to Pseudouridine-metabolizing bifunctional protein C1861.05; acc. no. Q9USY1" mRNA complement(join(60168..60829,60921..61410)) /locus_tag="PCON_07800" /product="Similar to Pseudouridine-metabolizing bifunctional protein C1861.05; acc. no. Q9USY1" CDS complement(join(60168..60829,60921..61176)) /locus_tag="PCON_07800" /product="Similar to Pseudouridine-metabolizing bifunctional protein C1861.05; acc. no. Q9USY1" /db_xref="EnsemblGenomes-Gn:PCON_07800" /db_xref="EnsemblGenomes-Tr:CCX29981" /db_xref="InterPro:IPR011611" /db_xref="InterPro:IPR029056" /db_xref="UniProtKB/TrEMBL:U4LRR0" /protein_id="CCX29981.1" /translation="MDVGGVKVVDSGTGLGTPRYVAINDSNGGLYVAAADMRAVEQGL DTEVVRGEVGGGLAEWIVIDGNLSEATITAVLKEAGRKGKKVIFEPTSTPKSTRLFPA STIHNPPPVYPLTPLYAATPNLLELTSLYTACMSRDLFSTTLPWWPCLDSFLISSEFT DAITQLSHRCSLDLQSDGLVTKAIQLLPYIPRLFIKLGSKGCLVVRILENWEQKEEGE GRKGGYVNAGLRVRWNGKIEVRHFPAEEVKGDVVGVNGAGDTFLGVLAAGLVRGDKVE DAVERAQRAAVLTLGTREAVSDMVRGLAW" gene complement(61592..63443) /locus_tag="PCON_07801" /product="Similar to Pseudouridine-5' acc. no. Q01RY8" mRNA complement(join(61592..62019,62165..62528,62670..62878, 63201..63443)) /locus_tag="PCON_07801" /product="Similar to Pseudouridine-5' acc. no. Q01RY8" CDS complement(join(61718..62019,62165..62528,62670..62878, 63201..63381)) /locus_tag="PCON_07801" /product="Similar to Pseudouridine-5' acc. no. Q01RY8" /db_xref="EnsemblGenomes-Gn:PCON_07801" /db_xref="EnsemblGenomes-Tr:CCX29982" /db_xref="GOA:U4LEK2" /db_xref="InterPro:IPR007342" /db_xref="InterPro:IPR022830" /db_xref="UniProtKB/TrEMBL:U4LEK2" /protein_id="CCX29982.1" /translation="MRLPSTLRRLPNLSTRSRGLATLRPRPAGFAQFLKISDEVKSAL NAGQPVVALESAIYTHGFPHPQNLELAQDIEAVIRAHGAVPATICMLNGKAVVGLSSK EMEQMTDSANHKEKMKVSRRDLAFALGTAMNDPTRSLVGGTTIAGTSVIAHLAGIKVF ATGGLGGVHRGVEKTMDVSADLTELGRTPVAVVCAGSKAFLDLERTLEYLETEGVYVG TFGSDMYPAFYSREAGIKSPSVVRDAKEAASIIYASHALGLTSGQLFANPIPSEFEIP NSEIQSIIKSAVSAAESAGASGKDNTPFILADILRRTEGRSIKANRGLILNNAKMGAQ VAVELSKLEGSDRSYGF" gene complement(63671..65748) /locus_tag="PCON_07802" /product="Similar to Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; acc. no. Q10176" mRNA complement(join(63671..64163,64365..65225,65279..65748)) /locus_tag="PCON_07802" /product="Similar to Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; acc. no. Q10176" CDS complement(join(63875..64163,64365..65225,65279..65616)) /locus_tag="PCON_07802" /product="Similar to Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; acc. no. Q10176" /db_xref="EnsemblGenomes-Gn:PCON_07802" /db_xref="EnsemblGenomes-Tr:CCX29983" /db_xref="GOA:U4LDP9" /db_xref="InterPro:IPR007676" /db_xref="UniProtKB/TrEMBL:U4LDP9" /protein_id="CCX29983.1" /translation="MRSFLARGAVLLTSLFVAIAQATPETAPQLNLPEKFAPPPVFKN TNLLRNIDLTKPYQREVIAVVVENISKDPQTDYYIPFDKEVAERISYIEARDKAGVLG FLDVAKAQSPGPTQWYRVFISEPVKAGEQITLHIAIGLTGVVEPVPAEINQVDRQYLK WTGTQYSRSAYVTGKQKTKIKLINNEVPDYTQLEPKSDGSSDPAKLGSTITYGPYEEV TSAQLGGDVISLRYEYTLPVITADTFSREIEVSHWGGNLAIEEKYALTNTGAKLKDNF NRVKWTATNYLNPPTAAIKSLTYGLTNFPLNPYYTDEIGNVSTSRFRQEQKPGEAHLE LKPRYPLFGGWNYSYTLGWNHDLRNFVRQRGSSGNYVLRVPFMEGPKEPMVYKDVSVT VILPEGATDVAWYSPLPILSEERFFHKTFMDTLGRTAIKLRMSNVVDELQGRELRVSY NLSPVEFYRKPYVIFSALSALFLVSWVVAGIDVRIGPKKEGEEGK" gene 66600..70992 /locus_tag="PCON_07803" /product="Similar to Uncharacterized protein YML020W; acc. no. Q03722" mRNA join(66600..67396,67462..69833,69892..70992) /locus_tag="PCON_07803" /product="Similar to Uncharacterized protein YML020W; acc. no. Q03722" CDS join(67148..67396,67462..69833,69892..70150) /locus_tag="PCON_07803" /product="Similar to Uncharacterized protein YML020W; acc. no. Q03722" /db_xref="EnsemblGenomes-Gn:PCON_07803" /db_xref="EnsemblGenomes-Tr:CCX29984" /db_xref="UniProtKB/TrEMBL:U4LD01" /protein_id="CCX29984.1" /translation="MPGTKRHSNMPRSAVAATPPQTAVPIPAVSTVCAAGESTFSHDS RPSTPVRKPSTTSLATFATRSTASLRGTVERSTTSHENDDSSRRSSWFKKGTWPLSGH KSTAVAHVAHDNHHDLDHSDTELPNNPYIHVPNHDHGPAYQKSSTRLHEDYGIGARTP TGTLSKKPSLMMPPPPTVAPPQETCPPPSSRPETPAPAPAPAPVIPEPEPEPEPEPTP APVEAPEPEPAPEEPAMNNTAEAAEINTTAAQGGGLSSWVPLVGWWYGSQPAPTPEPT PVATPAPKPEDKEPSPEPIKVIEEEPEIEEEPVVEPVKEPEPEVKQVQPMSDDIIKAN RMRAESSAGGSTASIRSVPARPRSWFGLWGAGYEAVPESAPDTKPDVGEVPDVPTVQA PTRAPSIAEPVAEEEAPPTASANVSMQSGTAPSTSAPANRGYGWFWSSARNADTNSIR SSDGEVAVAGAPSEANPQKAKVKQPDMPASSVTKSASQLSLLQQDNCRVITPKPSNSK LAAAATPKSDAVNAAAPGLQPSSASVVAAAETNAAMLAASEARNAKQKLQKMMQQQNH LLPAFESCYRLPEQPSVLQRVTGLFRHTPVDSNHLYLSKQPPRIRKAVAIGVHGFFPM KLVRSVLGEPTGTSIRFANHAASSIKRWAEKNGIEVEVEKIALEGEGKVGDRVEMLWK LLQNWMDHVRSADFVLMAAHSQGVVVGMQLLARLIEEGCVDNARIGFTAMAGINLGPF YHLPTSILTGSAKELFEFQRHDSPASKKYVQAIRTVLAQNVRICYVGSIDDQLVPLES SVMTNISHPHIYRAVFIDGRIHAPDFLSHLVGFALKLRNLGVTDHGLIRELSTPLAGS LYGGEGHSRIYNDGAVYDLGVRHALETTECPGIPLRVLPFELPTNVNPYFLPWSLRGL LEETIVRTQLSGECTELLEQFEAWKPTSKVLKDVKFRLEGIRSKL" repeat_region complement(70990..71266) /note="repeat family Unknown" gene 72216..74078 /locus_tag="PCON_07804" /product="Protein of unknown function" mRNA join(72216..72250,72956..74078) /locus_tag="PCON_07804" /product="Protein of unknown function" CDS 72999..73283 /locus_tag="PCON_07804" /product="Protein of unknown function" /db_xref="EnsemblGenomes-Gn:PCON_07804" /db_xref="EnsemblGenomes-Tr:CCX29985" /db_xref="UniProtKB/TrEMBL:U4LKU5" /protein_id="CCX29985.1" /translation="MHPLWILNSNFEPKRVMPESNGFHIIPKDPKLKLRTPRSYEHRY YCRPRRMSTSNVHDEFAFRRQRYPRTGAHKLSLSTRKLVTVLSIQHPVQY" repeat_region 74042..75884 /note="repeat family Unknown" repeat_region complement(75924..77548) /note="repeat family LTR/Gypsy" repeat_region complement(78064..78350) /note="repeat family Unknown" CONTIG join(CATG01001149.1:1..39188,gap(86),CATG01001150.1:1..40703) //