LOCUS HE601459 1613849 bp DNA linear CON 17-SEP-2015 DEFINITION Caenorhabditis briggsae AF16 supercontig from assembly CB4, cb25.fpc2234. ACCESSION HE601459 CAAC02000489 VERSION HE601459.1 DBLINK BioProject:PRJNA10731 BioSample:SAMEA3138181 KEYWORDS . SOURCE Caenorhabditis briggsae ORGANISM Caenorhabditis briggsae Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 1613849) AUTHORS Howe K.L. CONSRTM WormBase Consortium JOURNAL Submitted (03-OCT-2011) to the INSDC. WormBase group, European Bioinformatics Institute, Cambridge, CB10 1SA, UNITED KINGDOM. REFERENCE 2 (bases 1 to 1613849) AUTHORS Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R., Waterston R.H. TITLE The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics JOURNAL PLoS Biol. 1(2), E45-E45(2003). PUBMED 14624247 REFERENCE 3 (bases 1 to 1613849) AUTHORS Ross J.A., Koboldt D.C., Staisch J.E., Chamberlin H.M., Gupta B.P., Miller R.D., Baird S.E., Haag E.S. TITLE Caenorhabditis briggsae recombinant inbred line genotypes reveal inter-strain incompatibility and the evolution of recombination JOURNAL PloS Genet. 7(7), E1002174-E1002174(2011). COMMENT Details of C.briggsae assembly version CB4: To improve upon the C. briggsae nuclear genome assembly CB3, 167 AF16/HK104 advanced-intercross recombinant inbred lines were successfully genotyped at 1,032 single nucleotide polymorphism (SNP) markers. The resulting data were used to estimate high-density genetic maps. Sequences were assembled by combining the physical and genetic positions of the SNPs to inform the process of ordering and orienting the cb25 supercontigs into chromosome assemblies. 37 of the cb25 fingerprint contigs were split into 100 supercontigs to resolve discrepancies between the physical and genetic orders of SNPs. 638 sequence supercontigs comprise the CB4 assembly. The total nuclear genome content decreased from cb25 to cb4 because of the removal of three supercontigs containing mitochondrial genome sequence (totaling 20.1 kbp). Assembly_name: CB4 Assembly_program: Phusion Seq_technoloy: capillary (whole-genome-shotgun) Seq_coverage: 10x Annotation details: Coding seqences below are the result of integration and manual review of the following data : computer analysis using the programs Genefinder (version 980506; P. Green, unpublished data), FGENESH (Salamov and Solovyev 2000), TWINSCAN (Korf et al. 2001), and the Ensembl annotation pipeline (Clamp et al. 2003); similarity to other proteins from BlastX analyses (http://blast.wustl.edu); sequence conservation with C. elegans using Jim Kent's WABA alignment program (Genome Research 10:1115-1125, 2000); individual C. briggsae GenBank submissions; and personal communications with C. briggsae researchers. tRNAs are predicted using the program tRNAscan-SE (Lowe, T.M. and Eddy, S.R., 1997, Nucl. Acids. Res., 25, 955-964). FEATURES Location/Qualifiers source 1..1613849 /organism="Caenorhabditis briggsae" /strain="AF16" /mol_type="genomic DNA" /note="supercontig cb25.fpc2234" /db_xref="taxon:6238" CDS complement(474..671) /gene="CBG09744" /locus_tag="CBG_09744" /standard_name="CBG09744" /product="Protein CBG09744" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XAJ0" /protein_id="CAP29310.1" /translation="MPQIAKPMSQIAKPMPQKAKPMSQIAKPMPQIAKPMPQIAKRMP QIAKPMSQIAKPMPQKAKPMP" CDS join(12451..12674,12720..12815,13084..13220,13593..13751, 13801..13942,13991..14116,14182..14293) /gene="Cbr-npr-15" /locus_tag="CBG_09746" /standard_name="CBG09746" /product="Protein CBR-NPR-15" /note="C. briggsae CBR-NPR-15 protein; contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10328 (Serpentine type 7TM GPCR chemoreceptor Srx) contains similarity to Interpro domains IPR019430 (7TM GPCR, serpentine receptor class x (Srx)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8XAJ1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8XAJ1" /protein_id="CAP29311.2" /translation="MTVVAPIPFAVLFSILTVVGIIGNVFVIYAIAGDRNMRKSVMNI LLLNLAVADLANLIFTIPEWISPVFFDTYGWLLPSFMCPVCRYLECVFLFASISTQTI VCIERYIAICLPIHARHLCSRRNALITVAVSWIIVCCFAAPYAVYHTVKTTTCSNTAG KSMWWQAYKWSEFLSFYLSPCFIIIVVYTKVSRCLWCKDPTLQNETRSCLENKMSIRG AEALRTRRNVVKMLIACVAVYFLCYSPIQFMFLSKAILNVSIHPAYEYILILNALAMT CSASNPLLYTLFSTKFRRRLRDVFSCNKPDVENETKKTYLSINNTSITGPRASFN" CDS join(25057..25095,25607..25715,26336..26500,27194..27246) /gene="CBG09750" /locus_tag="CBG_09750" /standard_name="CBG09750" /product="Protein CBG09750" /note="contains similarity to Interpro domain IPR017000 (Membrane-anchored ubiquitin-fold protein, HCG-1)" /note="Predicted" /db_xref="GOA:A8XAJ2" /db_xref="InterPro:IPR017000" /db_xref="InterPro:IPR029071" /db_xref="InterPro:IPR039540" /db_xref="InterPro:IPR040015" /db_xref="UniProtKB/TrEMBL:A8XAJ2" /protein_id="CAP29312.1" /translation="MSAKQSIDSQAEPVVLRLILVSGKTHEFEFSPLTSAHDVTQMVF DQWPDEWYEDKVQSAQMLKLIYHGRFLHGSVTLHALQLMPGKTTVMHLVTRENLPEPN SSETLTKRKSAGCCRCVLS" CDS complement(join(28232..28301,28350..28443,28489..29209, 29736..30054,30101..30254,30313..30409,30580..30789, 30863..31256,31303..31426,31476..31722,31819..32309, 32553..32685,34290..34367)) /gene="Cbr-pitp-1" /locus_tag="CBG_09751" /standard_name="CBG09751" /product="Protein CBR-PITP-1" /note="C. briggsae CBR-PITP-1 protein; contains similarity to Pfam domains PF08235 (LNS2 (Lipin/Ned1/Smp2)) , PF02862 (DDHD domain) (2)contains similarity to Interpro domains IPR013209 (LNS2, Lipin/Ned1/Smp2), IPR004177 (DDHD), IPR001666 (Phosphatidylinositol transfer protein)" /note="Predicted" /db_xref="GOA:A8X9J8" /db_xref="InterPro:IPR001666" /db_xref="InterPro:IPR004177" /db_xref="InterPro:IPR023214" /db_xref="InterPro:IPR023393" /db_xref="InterPro:IPR031315" /db_xref="InterPro:IPR036412" /db_xref="UniProtKB/TrEMBL:A8X9J8" /protein_id="CAP29313.2" /translation="MLIKEYRILLPMTVQEYRIAQLYMIQKKSRLDSHGKDSGVEIIS NKPYTDGPGGSGQYTFKIYHIGSRIPAWIRTVLPTNALEAHEEAWNAYPVTRTRYSTP MMDRFSLEVDTLYFDDHGEQENVFGLSDKDKATRIIDYMDFVKDPISSHDYCAEEDPK IYHSEKTGRGPLNDDWVTDHRKKGLSVMCAYKLCKVEFRYWGMQTRAERWIHDLALRN TMMRAHRQAWAWQDEWTGLTMNDIRKLEAEAALHLSKVMAVKENEDGKNEENESDDDD GDAVSDDLYFDCCDTSPIPTQKPSIIRWSSELELEIGQDDNSPPLTPHNGSTDTALLI MVFHGDFSPDNPADSKTTDTNTFGSTIETCVQRHYPQLRNRLHIVNVSCGCEMTQVVS KLTNVSSSFGLLHPSLSLMLPSANHLYNEAVEGTIRRANETYNEFIASQPLFNGEVFV VGDCVGGIFLYEAMTRKCDSMAFLKRLSSNVSSRIIKEDQSPHQSMTDITVTDTSSIS SCPQSHNQSVRDHSSLQNGHSSRRSARNYSAPPSASYVRKKISLVSVDSVSFGASRLN FQPSTIFLLGCPLGLTLMQRKLEGSEIDSLDSCQLFNLYYPLDPCGARIEPVLDSQLA CVPPYNVPKLVDISFESGRYQRYPLGDGKSQKFEPSIDTSQMWGSKRIDNLLYCPNSM VALPSSALPNILHASYWESCDVASFLLRQFVRGEECVMPTLSSSMNNIPLNIDLPTMH WKRRRTRFKIANLSANHRANDILVTAGMDLTVTAKFCYGPMDLVALSREAVSVFVCPQ RGDWYLHGVFDTDSHGRLTIQLAKTLPCGIHSVKIVVHGDRSYLDAFVAIVPHGTKCA VFSVDGSLTASVSVTGKDPRVRPGAVDVVRYWQEQGYLIIYLTARPDMQQRVVSAWLA QHNFPHALLFFNNSFSTEPLKQKSLHLRHIVDMGVHIHVAYGSSKDVSVYTSAGVDPE HVISVAGSRRRNVFRLVESYSSHLSALNSGQCALGQRIEDDGLTLSLHRNVQRTPSFT PRGGKFENEKDRR" assembly_gap 29360..29520 /estimated_length=161 /gap_type="within scaffold" /linkage_evidence="unspecified" tRNA complement(37762..37845) /gene="CBG28362" /locus_tag="CBG_28362" /standard_name="CBG28362" /product="RNA transcript CBG28362" /note="C. briggsae predicted tRNA" CDS complement(join(38062..38208,38253..38372,38418..38678, 38824..38907)) /gene="CBG09753" /locus_tag="CBG_09753" /standard_name="CBG09753" /product="Protein CBG09753" /note="contains similarity to Interpro domain IPR007714 (Protein of unknown function DUF667)" /note="Predicted" /db_xref="GOA:Q61JK7" /db_xref="InterPro:IPR007714" /db_xref="InterPro:IPR040441" /db_xref="UniProtKB/Swiss-Prot:Q61JK7" /protein_id="CAP29314.1" /translation="MFHNTFQSGLLSVLYSIGSKPLQIWDTQIKNGHVKRITDEEIQS LVLEIMGNNISTAFISCPVDPEKTLGIKLPFFVMVVKNMNKYFSFEVQIIDDKKIKRR FRASNYQSATRVKPFICTMPMRMDEGWNQIQFNLSDFVKRAYGTNYVETLRIQIHANC RIRRVYFADRLYTEDELPAEFKLYLPIRGQLSTQSPAFAMTSE" CDS complement(join(39261..39436,40038..40511,41689..41854)) /gene="Cbr-ben-1" /locus_tag="CBG_09754" /standard_name="CBG09754" /product="Protein CBR-BEN-1" /note="C. briggsae CBR-BEN-1 protein; contains similarity to Pfam domains PF00091 (Tubulin/FtsZ family, GTPase domain) , PF03953 (Tubulin C-terminal domain) contains similarity to Interpro domains IPR002453 (Beta tubulin), IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase domain), IPR004057 (Epsilon tubulin), IPR018316 (Tubulin/FtsZ, 2-layer sandwich domain), IPR013838 (Beta tubulin, autoregulation binding site)" /note="Predicted" /db_xref="GOA:A8X9K0" /db_xref="InterPro:IPR000217" /db_xref="InterPro:IPR002453" /db_xref="InterPro:IPR003008" /db_xref="InterPro:IPR008280" /db_xref="InterPro:IPR013838" /db_xref="InterPro:IPR018316" /db_xref="InterPro:IPR023123" /db_xref="InterPro:IPR036525" /db_xref="InterPro:IPR037103" /db_xref="UniProtKB/TrEMBL:A8X9K0" /protein_id="CAP29315.2" /translation="MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYNGESDLQL ERINVYYNEANVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSA KGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNV QNKNSAYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDGELDGTDGDAE" CDS complement(join(43969..44025,45402..45653)) /gene="CBG25874" /locus_tag="CBG_25874" /standard_name="CBG25874" /product="Protein CBG25874" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHM9" /protein_id="CAR99385.1" /translation="MNLFHRVWNTIRQCIGGEARDNGQEYQPVDRPNLPPTRSASPNS VTDSVSINFGSSGSECSVGTWKDLEELRKGCHRPYVRNDSIENPSIASGESGYESAAI " CDS complement(join(51283..51339,51394..51555)) /gene="CBG09756" /locus_tag="CBG_09756" /standard_name="CBG09756" /product="Protein CBG09756" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9K1" /protein_id="CAP29316.1" /translation="MNCFFLVLLIVLATSSESEASFPSEVQNSLFKPSSFVFRAKCKM MCSQMCSPVLGVCDRYNKCVCLNNYRIL" CDS join(57577..57792,57860..57949,57997..58106,58580..58727, 58775..58864,59133..59267) /gene="CBG09758" /locus_tag="CBG_09758" /standard_name="CBG09758" /product="Protein CBG09758" /note="contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (7TM GPCR, serpentine receptor class e (Sre))" /note="Predicted" /db_xref="GOA:A8X9K2" /db_xref="InterPro:IPR004151" /db_xref="UniProtKB/TrEMBL:A8X9K2" /protein_id="CAP29317.2" /translation="MIFTRSVAIFIRACGYFLVLFREEGVPSELLDVLWIAKFAAQAA ALCCILERSYATFFANNYENFKRCNFIVTACSGLSYIDASSDLGRKIHSFGYGIFFVV TTTMLIKINRRLVKKSSAGKCRLSERYQLAENIKALRLLVPFVLSITGNAIMLSIGII FFNVDTVFSLPECRLVPSYLPVFYLVLITTTILNLAAPLYVLYHNRKTLQNRKIGVSE LGQTQRSTAQMTWVLDQNDWKQVVGGRTDQYTHKLGRAEWKNEC" CDS join(74921..74971,75091..75159,75210..75312,75358..75440, 77438..77599,77764..77954,78152..78355,78408..78697, 78749..78906,78962..79322,79368..79489,79822..80031) /gene="Cbr-nhr-6" /locus_tag="CBG_09761" /standard_name="CBG09761" /product="Protein CBR-NHR-6" /note="C. briggsae CBR-NHR-6 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /note="Predicted" /db_xref="GOA:A8X9K3" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR013088" /db_xref="InterPro:IPR035500" /db_xref="UniProtKB/TrEMBL:A8X9K3" /protein_id="CAP29318.2" /translation="MEHLTIQTDEFQEFQDKYKYCSSPASVDSSYSSCSSVEDEIDIY TRLVRNEEPLRRDFFREMSKNSSANSSFDHGDLGPSSSSRKGSKVTDADLDSLFRSLV KPSTLAALEEQLRASGVIINTEFASLQDTSDQANVVPKPEVKVKVETIPEEFEQPSSS APSSSNQRALPSQSQLQPSVAPNPEMNASIAHIKSELDPMQAFQMPPNDLIFGAPHYP FSLTHDFMGAPNALMPPFTSPFYPQHFPVPAEARRNSQGNTSSSNNTGGTPSPHSNSL PTSPPQLHGFLRSFLNHDNLQTPPTPFGIQDEVLDADKMCAVCNDRAVCLHYGARTCE GCKGFFKRTVQKNSKYTCAGNKNCPIDKRYRSRCQYCRFQKCLEVGMVKEIVRGGSLS GRRGRLSSKTKLARSVDQPSPPLPLLALMGKAIEDNTNMTVTRHFLAPFGEDSAVSIL HCEYIATRKLLMAMPQICEIPEPDFRILLARSFFPIMAIRCANRCANNTESIMFESGE LFMLNAFPICFQQILRFMINKAQNFSSLVEWEPQAFASFIALQFLSGNTEQNLLGLSN KVLVDTVQSTIINALKDHCSGSQNKLAKIVRLTDEFDVFHTMGIQVLDSMYPSTRFPE EFQHLISLTRAPLRTADTQPACGSPVVPSTSALFAFQMGSTAF" CDS complement(join(80567..80709,81455..81592,82577..82657, 82704..82836)) /gene="CBG09762" /locus_tag="CBG_09762" /standard_name="CBG09762" /product="Protein CBG09762" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9K4" /protein_id="CAP29319.1" /translation="MLLRFLILSFLCSNCCILAAKETPWYYPIIEILQAKLVDFTCSQ ECTTTMDCDTGLSCFHASTYSKGCCLMALKPNETGCMIEDQCKQACESTICDRSQFPS RCLCEKGRHFLFNKCWKKCPDFAYPEPIIDDRGFSRCELKTDLNTAVQYMRRNKRQMR NNFC" CDS join(91004..91141,91229..91345,91390..91606,92089..92215, 92270..92516,92564..92790,93233..93346,93426..93578, 102566..102668,105021..105201,107588..107772, 107823..108123,108788..109016,109074..109161, 109209..109484,109541..109825,113787..113873) /gene="Cbr-ptp-1" /locus_tag="CBG_09764" /standard_name="CBG09764" /product="Protein CBR-PTP-1" /note="C. briggsae CBR-PTP-1 protein; contains similarity to Pfam domains PF00373 (FERM central domain) , PF09380 (FERM C-terminal PH-like domain) , PF09379 (FERM N-terminal domain) , PF00595 (PDZ domain (Also known as DHR or GLGF)) , PF08736 (FERM adjacent (FA)) , PF00102 (Protein-tyrosine phosphatase) contains similarity to Interpro domains IPR019748 (FERM central domain), IPR012151 (Protein-tyrosine phosphatase, non-receptor type-3, -4), IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR019750 (Band 4.1 family), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR019747 (FERM conserved site), IPR014847 (FERM adjacent (FA)), IPR018980 (FERM, C-terminal PH-like domain), IPR001478 (PDZ/DHR/GLGF), IPR019749 (Band 4.1 domain), IPR018979 (FERM, N-terminal)" /note="Predicted" /db_xref="GOA:A8X9K5" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000299" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR011993" /db_xref="InterPro:IPR012151" /db_xref="InterPro:IPR014352" /db_xref="InterPro:IPR014847" /db_xref="InterPro:IPR016130" /db_xref="InterPro:IPR018979" /db_xref="InterPro:IPR018980" /db_xref="InterPro:IPR019747" /db_xref="InterPro:IPR019748" /db_xref="InterPro:IPR019749" /db_xref="InterPro:IPR029021" /db_xref="InterPro:IPR029071" /db_xref="InterPro:IPR035963" /db_xref="InterPro:IPR036034" /db_xref="UniProtKB/TrEMBL:A8X9K5" /protein_id="CAP29320.1" /translation="MRLGSNSYDVQRTEAIGQAPVKSPPPNQIRCTVTFLDSTSFHFE IEKNSLGIVLLEKVFNYLEIIERDYFGLVFIAVDSSSTQQKKWLDPSKNLRKQMVCPP YHLFFRVKFFVRDPNRLRDEFTRFQFYQQVRQNLEEGKLPCNEGSLALLASYVVQVEV GDFEEKTHGMSRACLCYKIQFATLPDDFSDRVAELHQLHIGQTPDIAEQNFLDHARRL EMYGMDVYDGRDANNLLIEIGVGAVGIKVFHDGIKMDEYAWARIRKLSFKKKQFQVLV ANEEGISETNIVFNIMSAKTCKLLWKCCIEQHTFFRLKAPPKTPQRKVFNFGSKFRYS GRTEYQTLEENEHRKSAGHRNFHRSLSKSSFLRSTFSGNTQSIDSSRYTNTTTTDSPE LPSSGQLLARRLLSSARHDTDSSDALGYASDGAVVCAPLITPLSPRRTRDYATDSESS APSLRQQRLSKEAIYYGTQESCDEKSWTPSMACTSTSPGIHATASIRPSTTGTPNGAS RKATSGYSAYGYANSTQTQQPTSTTNTNYSPYMNGTISRSSGIAVAKSARGGLPPTNQ SYNTSSPRNSVASYSSFASAGIGGSPPRSRKSPQSNKSSSPVGEDQVVTIKMRPDRHG RFGFNVKGGADQNYPVIVSRVAPNSSADKCQPRLNEGDQVLFIDGRDVSTMSHDHVVQ FIRSARAGANGGELHLTIRPNVYRLGEEIDEPDSQMVPEPARVADSVPRSDKLSQSLQ LLSDALTTGKVVDQFEMLYRKKPGLTMNICRLNANASKNRYRDVCPYDDTRVILQTSG SGDYINANFVNMEIPSSGIINRYIACQGPLLHTSGDFWLMVWEQLCTTIVMLTTITER GRVKCHQYWPRLNETQEYGRLMIRCIRDKQTPNCCYREFSVRDRSTNEERRVTQMQYI AWPDHGVPDDTKHFIQFVDEVRKARQGSVDPIVVHCSAGIGRTGVLILMETAACLVES NEPVYPLDIVRTMRDQRAMLIQTPGQYTFVCDSILRAYNEGTIKPLAEYQKR" CDS join(97094..97227,98046..98097) /gene="CBG09765" /locus_tag="CBG_09765" /standard_name="CBG09765" /product="Protein CBG09765" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9K6" /protein_id="CAP29321.1" /translation="MEVPSFVGKACLKLKGLCVNVWTATLATCQEREDFDEKVPPRAF RRRWYSISFVSIPKKAT" CDS complement(join(105865..105976,106268..106363, 106412..106486,106923..106978)) /gene="CBG09767" /locus_tag="CBG_09767" /standard_name="CBG09767" /product="Protein CBG09767" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9K7" /protein_id="CAP29322.1" /translation="MIGKLIQLLDFRLGIPLNLPTDGFQRLACLPKAKNQKFSADSYR SGAQNSVTTKPFTVSTGHTTSERNSTDRITKRKKTTKSNFSIGLSSNGYKEGEMRRKY RVQGARRQKC" assembly_gap 110633..113572 /estimated_length=2940 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(115351..115540,115636..116015, 116501..117053,117132..117238)) /gene="Cbr-sel-8" /locus_tag="CBG_09768" /standard_name="CBG09768" /product="Protein CBR-SEL-8" /note="C. briggsae CBR-SEL-8 protein ;" /note="Predicted" /db_xref="GOA:A8X9K8" /db_xref="InterPro:IPR021587" /db_xref="UniProtKB/TrEMBL:A8X9K8" /protein_id="CAP29323.1" /translation="MKPSTSKAGSSAQSPPPEEPNSAYVNNELPDPDDEPLVSEMTVY NKGQEEARLRSQEAYEKFQKTRQESISSQRAVTAQLYHRFTEDEERKRMEHQKNKEAM NASVASASRNGHIDNRKRRNDVGSLSAEEEWRRAQQQQHWMGQAAPMHPSYQMQQQYH QQQVAAQHHQFMAPHSVPTPGSIHRPSPSGMQSVCLPTSDENSLDVPNGEWFDKLAVM VAEKYDATTILGPDTYDVYLNELDAMEPVGETVKTPSEAGQSASQPMNPQQQQMAQQQ NKMRMLQQQEMMEQQRQQQMMHQHQQQHRQQQMLLQQQQMHQLQQQNQMNGGQFTQAQ QHAVYLQRMQHMRLQQQQQQQQQQAQHHQQAQQHQQPHQNGVMGYSVPNGYAHPNGYA PYGHHMPHHTPFANING" CDS complement(join(123764..124127,124179..124613, 124671..124832,124965..125065,125118..125213)) /gene="Cbr-mrps-31" /locus_tag="CBG_09769" /standard_name="CBG09769" /product="Protein CBR-MRPS-31" /note="C. briggsae CBR-MRPS-31 protein ;" /note="Predicted" /db_xref="GOA:A8X9K9" /db_xref="InterPro:IPR026299" /db_xref="UniProtKB/TrEMBL:A8X9K9" /protein_id="CAP29324.1" /translation="MLRNLCSVAVRLGSKRQQQLLSSTTSGGDDEGKRPKPKDVIDED LLKAIDGVADNIHPQNGTEKKSLKNTLINRLVASEKASFDAASASASSEILDDQALIG LLADVAGDAKVERKIPPKSAQLRQEKRGLVLLRKEIFYQAVQSGFTTEEARVKSETIV NDAQQKLIEQRKALLNNLREKAEQEETEQTERSEKEQKLFAIALEFMEKIYKDDVINS DARKPVLVDNDAVKLFQQRPLGVWKKNENYEDFSLGFWKKWDQRAALIANGSFGPTNA FEEQIEWTSKGKQWEYPIDNEFKMGEEANVSFIDHVFLERHLPSLGIPKTGPIAHFMH LVCVGLSKNPYMTAAKKREHLKWFADYFNTEKQKLVHKLHEQEQIAAQNAL" CDS join(130496..130675,131770..131868,131917..132205, 132943..133058,133108..133487,133545..133676, 133730..133838) /gene="Cbr-rilp-1" /locus_tag="CBG_09770" /standard_name="CBG09770" /product="Protein CBR-RILP-1" /note="C. briggsae CBR-RILP-1 protein; contains similarity to Pfam domains PF11461 (Rab interacting lysosomal protein) , PF09744 (JNK_SAPK-associated protein-1) contains similarity to Interpro domains IPR019143 (JNK/Rab-associated protein-1, N-terminal), IPR021563 (Rab interacting lysosomal protein)" /note="Predicted" /db_xref="GOA:A8X9L0" /db_xref="InterPro:IPR019143" /db_xref="InterPro:IPR021563" /db_xref="InterPro:IPR034743" /db_xref="InterPro:IPR034744" /db_xref="UniProtKB/TrEMBL:A8X9L0" /protein_id="CAP29325.1" /translation="MASDMLFNRRFDEFILECRSSDRPTSAAVLHRPRKKISAFVNAM ASARSSSPQSPSKHITVVDVYDLAASIGNDFEKLIDNYGNECVRGIMPKVISALETLE AMAAGNDRENEEIMRLSKAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQM VKNLVNENRNLSTTVSSLPTNNDSPVSSSMREADLRMLLELKEMSAQQKDEIKALQKD VDTYQCQVENLQNSIEKLIRQNEELLRKNSSLQKQGRVIVEEKMEVLKRLEKTEESNI ELKKLVKETDRACKDMQVANQDNNEPRFTLGELREVIKEKNILKGRVMELEEELEQFK PGAKKEIMRLDDDDDSDQLAPNSDDANRTGDDEEDLPVYGPLPKEPDEKLHPWKYERK DSGVRKFFRFFKDFGATASPRRGSSANASPRLPARAIPPSLN" CDS join(135254..135346,135759..135908,135953..136047, 136097..136183,136227..136430,136474..136570, 136616..136725,136770..136904,136953..137093, 137518..137609,137651..137738,137785..137923, 138139..138406,138454..138653,138742..138867) /gene="Cbr-unc-93" /locus_tag="CBG_09771" /standard_name="CBG09771" /product="Protein CBR-UNC-93" /note="C. briggsae CBR-UNC-93 protein; contains similarity to Pfam domain PF05978 Ion channel regulatory protein UNC-93 contains similarity to Interpro domain IPR010291 (Ion channel regulatory protein, UNC-93)" /note="Predicted" /db_xref="GOA:A8X9L1" /db_xref="InterPro:IPR010291" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8X9L1" /protein_id="CAP29326.2" /translation="MGDSNTWDLVGEQQQRKKSRSPSRASRVDSELLVGVENAAELEA LGLGKEQLEEEARRHKKQRSKSPALENIRKTSIHILQKFGAIPKKKDDSVLLFRHQDI PDISLESLCIRPKEFFEEPKVFSFRDMGREQQKAEVNEKCSYLFRGASFDQDDHFELP TETGRIPEYDHFCPIHGSRRRLPRNKLVTMQSLMHSVDGEDNEDLSYIYGHDFLAKLV RKKKREMLSGAEKERATKIKRKIMSNLWILSVALLFLFTAFNGLQNLQTSVNGDLGSD SLVALYLSLAISSLFVPSFMINRLGCKMTFLVAIFVYFLYIVINLRPTYSSMIPASIF CGIAASCIWGAKCAYITEMGIRYASLNFESQTTVIVSCGYQFPKNLSYLSELAESNLA RPPQKVYVAVCLAYLACIIISGMIMSMFLNALVKDTRNRKMAQRFNSEIITLMVKHLI NIKFLLLVPLTIFNGLEQAFLVGVYTKAFVGCGLGIWQIGFVMACFGISDAICSLVFG PLIKLFGRMPLFVFGAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQIN GFWVALVGRQSLQFAFTKYRFWESLGIAIGFALIRHVTVEMYLLITFFVLLLGMCGFV AIENFDHIMCFWKILKENSQMEKKAACVEQQRSDSVRNNSKVESEHKTMY" CDS complement(join(139028..139148,139192..139347, 139392..139584,139630..139757,139804..139931, 139979..140071,140336..140457,140500..140539)) /gene="Cbr-madf-8" /locus_tag="CBG_09772" /standard_name="CBG09772" /product="Protein CBR-MADF-8" /note="C. briggsae CBR-MADF-8 protein; contains similarity to Pfam domain PF10545 Alcohol dehydrogenase transcription factor Myb/SANT-like contains similarity to Interpro domain IPR006578 (MADF domain)" /note="Predicted" /db_xref="GOA:A8X9L2" /db_xref="InterPro:IPR006578" /db_xref="InterPro:IPR039353" /db_xref="UniProtKB/TrEMBL:A8X9L2" /protein_id="CAP29327.2" /translation="MVTTETSTALESEEHSTQQSRNSLLGKCKSDQETIEDGLVVSSI KQLVGRKWKKTRYRPIKNIRRFQGSSTNNKQKKTRKIEQISPKREELDEKTVDGFIPD NVFYRPTSNSMYIPTITADMIQDEGSHLTVQTYSEEYFKYARIRQTTKNDHADPAKVV QIISAVRKRPVIWDQRLTSHQNLALIRRAWIQLDNELGIDEEYPLARRKQIWKSKKDY YSYAINTDSLGRWTFAHVMEFYEPMVNFRAKVCLRPTVLGEPPVELQDKLILAGKCIQ CTPFDKSNVLTFVLKSLYDVGMADAVMMEKHGKAILDIFERGQAAVKILD" CDS join(141161..141408,141461..141718,141767..142640) /gene="Cbr-gsr-1" /locus_tag="CBG_09773" /standard_name="CBG09773" /product="Protein CBR-GSR-1" /note="C. briggsae CBR-GSR-1 protein; contains similarity to Pfam domains PF02852 (Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain) , PF07992 (Pyridine nucleotide-disulphide oxidoreductase) , PF00070 (Pyridine nucleotide-disulphide oxidoreductase) contains similarity to Interpro domains IPR013027 (FAD-dependent pyridine nucleotide-disulphide oxidoreductase), IPR006322 (Glutathione reductase, eukaryote/bacterial), IPR000103 (Pyridine nucleotide-disulphide oxidoreductase, class-II), IPR012999 (Pyridine nucleotide-disulphide oxidoreductase, class I, active site), IPR004099 (Pyridine nucleotide-disulphide oxidoreductase, dimerisation), IPR001327 (Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain), IPR000815 (Mercuric reductase), IPR023753 (Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain)" /note="Predicted" /db_xref="GOA:A8X9L3" /db_xref="InterPro:IPR001100" /db_xref="InterPro:IPR004099" /db_xref="InterPro:IPR006322" /db_xref="InterPro:IPR012999" /db_xref="InterPro:IPR016156" /db_xref="InterPro:IPR023753" /db_xref="InterPro:IPR036188" /db_xref="UniProtKB/TrEMBL:A8X9L3" /protein_id="CAP29328.2" /translation="MSGVKEFDYLVIGGGSGGIASARRAREFGVSVGLIESGRLGGTC VNVGCVPKKVMYNCSLHAEFIRDHADYGFDVTVNKFDWKVIKKSRDEYIKRLNGLYEG GLNGSSVELIRGRASFAEDGTVEVNGAKYRGKHTLIAVGGKPTIPNIKGAEYGIDSDG FFDLEDLPSRTVVVGAGYIAVEIAGVLANLGSDTHLLIRYDKVLRTFDKMLSNELTAD MDEETNPLHLHKNTQVTEVIKGEDGLLTVKTTTGVIEKVQTLIWAIGRYPLTKELNLE RVGVKTDAGGHIIVDEYQNTSAPGILSVGDDTGKFLLTPVAIAAGRRLSHRLFNGETE NKLAYENIATVVFSHPLIGTVGLTEDEAVRDYGKDNVTLYKSRFNPMMFSVTKHKEKS AMKLVCVGKEERVVGVHIFGVGSDEMLQGFAVAVTMGATKKQFDQTVAIHPTSAEELV TMRGGVKPE" CDS complement(join(142941..143018,143059..143150, 143200..143325,143371..143491,143533..143850, 144053..144412,144466..144569,144617..144704, 144747..144900,144951..145066)) /gene="CBG09774" /locus_tag="CBG_09774" /standard_name="CBG09774" /product="Protein CBG09774" /note="Predicted" /db_xref="GOA:A8X9L4" /db_xref="UniProtKB/TrEMBL:A8X9L4" /protein_id="CAP29329.2" /translation="MMERIRETGRRLHRVYRETIEWRNPLTGLYLMAVNSAFWIGVIY CDPRIQEALLATASAGIFAWDILLSSSNDRSIITHLLMWPFQSIFRTLSVGGSVYSIH LLRAEEVRLACYSAYATLACLLINPVWEHNEVNAKIGSAVQKTASWFGNWIQYLIITP IVTVYEYTKYIVLFRWVPRKHLNLEILLLKNFSINCTYKTFRLQFPRSLWRTSHWNQE LVWFSFDLSIELKRFFRFHVTVIERTERVAERIRKFLRYWFCAEWWPSLKEWLKINVG VPLRYLFDQLCFVFVYIFCAHWFPPLWRFTVKQLKVLGALAHKHLWVPVKGFLFCQFE RLRCWLRDTLHSIAIAVRDSIIWPICVLMVEVGKQCSIFVYHLLLEPVVNYLYGRYKI IETSALIYILGPVCETVIDHIPEKNPFCEDSDVEFDGFLPEVNDDTDLDENMVDNEDD EMQSQLSSSPIPEEEFEFERGLKFSAVNGSESSDAEFDLEAPKRTVRRRRREPRKSDM AVDDEYELLE" CDS complement(join(145362..145571,145623..145695, 145744..146380,146427..146666,146715..146814, 146860..147352,147384..147563,147612..147860, 147916..147989,148048..148175,148221..148299)) /gene="CBG09775" /locus_tag="CBG_09775" /standard_name="CBG09775" /product="Protein CBG09775" /note="contains similarity to Pfam domains PF00270 (DEAD/DEAH box helicase) , PF00271 (Helicase conserved C-terminal domain) contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR000629 (RNA helicase, ATP-dependent, DEAD-box, conserved site), IPR014001 (DEAD-like helicase), IPR001650 (Helicase, C-terminal)" /note="Predicted" /db_xref="GOA:A8X9L5" /db_xref="InterPro:IPR000629" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014014" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8X9L5" /protein_id="CAP29330.2" /translation="MWRGKYTGNYHNRFVSAKSSGTSSLSDGQSMNNVPPPAALTVGN APVPPPNRNVFMSSRKEQEMKKEQEYANLMAYGSTSEKQADENGSTMMSIYLEGGSDD EKPSKSSSSIPDDDEEEDELDAFMAGIEKQATKDKKVSEQKEKDRKEGKDTEDPSKKG LGRADIDEEDMQESLFKFMEEYKEKHENDEEQYEYDEDGNIIWTWKKVIDPLPDIDHT QIQYPKFNKNFYEEHDDIKLCFRRLQYLDIIRLQNTMNLRVGGLKPPRPVCSFAHFSF DKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHTMDQ PDLKEGEGPVAVIVVPTRELAIQVYQEAKRFCKVYNINVICAYGGGSKWEQSNELQNE GAEMVVCTPGRIIDLVKMEATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQ CLMFSATFKQKVERLARDALVDPVRIVQGEVGEANADIEQKVYVMQNQDVKFHWLIRN LVEFASLGKVLIFVTKKLDSEDLAKKLKLKDFDIVLLHGDMLQAERNENLLKFRKKSQ ILVATDVAARGLDISEIRTVVNFDMARDIDTHVHRIGRTGRAGHRGTAYTLVTEKDIE TVGHLVKNLESVSQEVPKPLMDLAMKCAWFRSQRAGHGGPSTGTQARGRTGLGYTPKV RTGGPGAQGGQQYDPLKDQRNSKGGSGYGGSTNQTVDGMVQSAQRLATSSGGVPASGA NRAQMLKSAFQKSFQSTFQRPTNESSNLPTQVASDPRPEWKKKVDELNARIAQQHQQN QSSSSSSSSAPSSSSSKRSRWE" CDS join(152196..152213,153108..153201,154255..154548, 154594..154753,154803..155135,155183..155262, 155306..155442,155828..155984,156030..156209, 156694..156800,156832..157098) /gene="Cbr-hmit-1.3" /locus_tag="CBG_09776" /standard_name="CBG09776" /product="Protein CBR-HMIT-1.3" /note="C. briggsae CBR-HMIT-1.3 protein; contains similarity to Pfam domains PF07690 (Major Facilitator Superfamily) , PF00083 (Sugar (and other) transporter) (2)contains similarity to Interpro domains IPR011701 (Major facilitator superfamily), IPR005829 (Sugar transporter, conserved site), IPR005828 (General substrate transporter), IPR003663 (Sugar/inositol transporter)" /note="Predicted" /db_xref="GOA:A8X9L6" /db_xref="InterPro:IPR003663" /db_xref="InterPro:IPR005828" /db_xref="InterPro:IPR005829" /db_xref="InterPro:IPR020846" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8X9L6" /protein_id="CAP29331.2" /translation="MVQVAPVGVGGGSGQSRPASDPRIGWFVYMLAFSAVIGGFLFGY DTGIVSAAMLYVPDAAGIKPLDSVWQEIIVSVTPGVAAIGSLCSGPGSDFLGRKKIII GASVTFAVGAVICAAAWTKIVLLIGRILLGAAIGFASMIVPIYVSEASPSHIRGKLVT GFQLMITVGLVIANIVGGAFSYVDPFGWRLMFAFAAVPAIIQFVCFLFLPESPRWLYE HGRTVEAREVLTRIYNGHTEWVDYEINEISFSYEEELRAKAEHAGNGPTIIRILKTPH VRKALIIGSLLQMFQQLSGINTVMYYTGNIIRSAGVKNKHTTIWISVGTSAINFIGTF IPIALVERLGRRVLLLVSMIGVILFLIAMGVSFLLINNDSSLTYPQNEYAATPNFNPS VKDAIKCMKYSNCDFCVTDEKCGFCENKASKTGYCLPFPDSDSADFSATGICQFSNLT GNGKTYEWEDSYCHTKFTVLPIIIMVFYLLSFSAGYAPLPWVLNAEFYPLWARSTAVS ISTAFNWIFNLILLPNMVSFNTQLNFMKIFTGTFFIYCGCTIVALIFVFFFVPETKGY SIDEVEMLFMTKEEREKTQKVLDESKEGKHRNSVALSYDTKF" CDS complement(join(157637..157837,157923..158040, 158120..158277)) /gene="Cbr-mrpl-35" /locus_tag="CBG_09777" /standard_name="CBG09777" /product="Protein CBR-MRPL-35" /note="C. briggsae CBR-MRPL-35 protein; contains similarity to Pfam domain PF01632 Ribosomal protein L35 contains similarity to Interpro domains IPR021137 (Ribosomal protein L35), IPR019338 (Ribosomal protein L35, mitochondrial)" /note="Predicted" /db_xref="GOA:Q61JI9" /db_xref="InterPro:IPR019338" /db_xref="UniProtKB/Swiss-Prot:Q61JI9" /protein_id="CAP29332.1" /translation="MFTKAAFSSLCASRHAPISVAVRGIANIPAHEYHIRFDQRVGRK RPAQDVLDRFKRLNNGMWIHAHPGRHKLRYMKDETWQKTSLYYETCTKEQCEILDKLM TPYWLRPKHYPNDPYSAYHVRHNIDSPRVDDRGNFVRERKKVLMDDSTSQRFFKDC" CDS join(158697..158807,158857..158989,159022..159145, 159192..159443,159493..159722,159777..160360, 160420..160576,160626..160867,160914..161023, 161056..161219,161272..161684) /gene="CBG09778" /locus_tag="CBG_09778" /standard_name="CBG09778" /product="Protein CBG09778" /note="contains similarity to Interpro domain IPR002549 (Uncharacterised protein family UPF0118)" /note="Predicted" /db_xref="GOA:A8X9L8" /db_xref="InterPro:IPR002549" /db_xref="UniProtKB/TrEMBL:A8X9L8" /protein_id="CAP29333.2" /translation="MSSEGGTAVIQRYFGGGDSEQRTALQFAFYNVLLFVLLGVALCG LFALYNMMYMFLSPMLWAVLVGTVLFPFKKKVTDIVQNLLLDWLRHLQDTNQTLAKAV ITLPFTGFKKVSDTIYKTFASPNGAIIALAYAALKVLSYERTFMYVISWIGRLYGYLD SFIVFFARPWVLPLIVVYFCCYAAWIYVQDPKQINKKLARSFSLPIWIYVISYASLYF GPLRACVFGVSAAVLGLLSAGVIGSQRSSEAEEKPKEETSSVNQDESSSLLPPNVEKI LESAKEKLDATEKSLLENSMLSTSTVDEAITGDWLIRCVFGLCALLWVVRHDGALILI AIPFVLAVLSRVAEQLGITAAVNNFLDNSWQKIAPSVMKVVEITVAGPLRQFVKMLFS SDKYIVESLYDKMDVLSSVIVMALLAFSAILAVFFVGFQLHGETVHLVRLTSNVVNSR PDWLAAAMDYTEDQLEENNIDIDDYVQQAYEQGRTWLASNVRSLANAKDTKRADMLEE QVKQVVDKLYHLWEDRNNNMTVAVNQTSRGDVWQQLKGVTDLAALKDELTLIVKENLD TLMGVAQSVGSILAVNVSIFSSLLVSFAGIILSFGMELLNTFIELIVFLTMVYYLLSA SRTRWLPLQWASDLSAVTANDETINRTRHFVSFRSYPFTFIFFSSGVFILSAKMAVFY GLYTYFVHSLFDLNIVFVPSMAATLFAAIPIMPPYIVAIFGIVELWLVRGEGAAALVF TLASFAPVMFADATFYKEVKGSHPYVTGLAIIGGMYWLGLQVYYARKSKKATLNFQGA IIGPIILCLCLVLVNVYLQHVKPSALYTPAPTPRNIKLSST" CDS join(162601..162703,162753..162850,162900..163201, 163246..163481,163528..163850,163934..164051, 164063..164302,164350..164502,164551..>164730) /gene="Cbr-rpl-16" /locus_tag="CBG_09780" /standard_name="CBG09780" /product="Protein CBR-RPL-16" /note="C. briggsae CBR-RPL-16 protein; contains similarity to Pfam domains PF04055 (Radical SAM superfamily) , PF00572 (Ribosomal protein L13) contains similarity to Interpro domains IPR023563 (Ribosomal protein L13, conserved site), IPR003698 (Lipoate synthase), IPR005822 (Ribosomal protein L13), IPR007197 (Radical SAM), IPR005755 (Ribosomal protein L13, eukaryotic/archaeal), IPR006638 (Elongator protein 3/MiaB/NifB)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X9M0" /db_xref="InterPro:IPR003698" /db_xref="InterPro:IPR005755" /db_xref="InterPro:IPR005822" /db_xref="InterPro:IPR006638" /db_xref="InterPro:IPR007197" /db_xref="InterPro:IPR013785" /db_xref="InterPro:IPR023563" /db_xref="InterPro:IPR031691" /db_xref="InterPro:IPR036899" /db_xref="UniProtKB/TrEMBL:A8X9M0" /protein_id="CAP29335.3" /translation="MLTRVWARGFADASKKKTQLVIKDGPSLQDFISSASVAEAVEKY EGKLKLEKGDRRLRLPPWLKKEKILPSENENVSRLKKQLKTLKLATVCQEARCPNLGE CWGGSEDSLATATIMLMGDTCTRGCKFCSVKTARAPPPLDPMEPENTSTAVASWGVEY IVLTSVDRDDLPDGGADHLRQTVQLMKLKKPELLIECLLPDFAGDKISVEKLATSGLD VYAHNIETVERLTPWVRDPRAKYRQSLNVLKYAKEVSPRLITKTSIMLGLGEEDDEIK RCLANLRSSNVDVVTFGQYMQPTKRHLLVKEWVTPEKFDEWAEYSKKLGFLYVASGPL VRSSYKAGEFYLKNVLRNRQFFLRVTSLFIIFEFSSSSSSLVFSFFQLLYNTLQGKRW VSIIIDGKNHLLGRLASIVAKKLLQGEKVVVVRAEEITISGNFHRSKLKYMSFLRKRC NINPARGAFHYRAPGKIFWRTVRGMLPHKTIRGNEALKNLRAYEGVPAKYQKTKTLHA PSASRFRLQPRRKFCLVGRLSHEVGWQYQDVVAKLEAKRKVKGAAYYEQKKKLDKLAV QAKVNAAPKIAQYQKIIE" CDS join(164907..165068,165115..165309,165353..165547, 165598..165949,165996..166123) /gene="CBG09781" /locus_tag="CBG_09781" /standard_name="CBG09781" /product="Protein CBG09781" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9M1" /protein_id="CAP29336.1" /translation="MATVLNEQGSVVAVSHDMIMVRYNGKGVLFKKDMMNRTYKHDDI VQFSAKRATTVDIEVGDKLSQMANYEIGWLGTDIKYIKPGRLIMAEGVVINIPDERAQ FMFVDWKYTKNPPGLPKIPGYNKPLNTNVFITKATVRPEIEKLSEMFKPGQRVKYVAR EQAPNERGVCWRAAIATDEYHDIVVDTTYQGRQTYRAVPKTGVTRPAPQPVKTQAKPT PTPTAIVNNPHSGQRPLVKPIPKPAETPKPASSSVLTSAPASTIPSTSSSTRTSFDVG KPPPTNGFDYFDTTEEACNARFNAFAAKYRKENPTCIFSQKCFEGCLKVKYLNTITEQ LSAIKVAQN" CDS join(166346..166496,166542..166711,166755..166970, 167019..167261,167305..167497,167562..167677) /gene="CBG09782" /locus_tag="CBG_09782" /standard_name="CBG09782" /product="Protein CBG09782" /note="contains similarity to Pfam domain PF08737 Rgp1 contains similarity to Interpro domain IPR014848 (Reduced growth phenotype protein 1)" /note="Predicted" /db_xref="GOA:A8X9M2" /db_xref="InterPro:IPR014848" /db_xref="UniProtKB/TrEMBL:A8X9M2" /protein_id="CAP29337.2" /translation="MLEVTATLDREVAIYLAGETVRVTVTVCNLSRGKQGVSEQLAWG SLQLICERTIGASSSSSTSTASSRPRPTTSVTKSAATVYSSPPNILFCELQLAPGQSK QFTCDIPLSRNGIPPTFRGHLVKYSNRVTVAVSHVQEHIKSAHLPIRIIPSVGLETKL SIHTNPFLASALTRPSVVETVMSTVDDLTQARKSLAFALTHNSSTSRVALLTLPKKAY KLGDDVCGFLDFNGATTPCVQYSATIETEEHLIDADVEEGKKKMVKVHCQTAPICTFS PDSTFRLSIPLTATPTFSTDSVQLKWKIRFVFVVTEQAYDVHLNGDVANVPVESFSWS TDLLVLPCKPQNAALIDNTFPNRISMTV" CDS join(169880..169976,170024..170175,170531..170586, 170636..171050,171094..171173,171217..171366, 171415..171505,171555..171664,171717..171786, 171833..171937) /gene="Cbr-gly-14" /locus_tag="CBG_09783" /standard_name="CBG09783" /product="Protein CBR-GLY-14" /note="C. briggsae CBR-GLY-14 protein; contains similarity to Interpro domain IPR004139 (Glycosyl transferase, family 13)" /note="Predicted" /db_xref="GOA:A8X9M3" /db_xref="InterPro:IPR004139" /db_xref="InterPro:IPR029044" /db_xref="UniProtKB/TrEMBL:A8X9M3" /protein_id="CAP29338.2" /translation="MQDSTLITIIFIFFYFSWNFYLHSRLVYVNSNDFESEEILNNFE EAEKRLNAILHGDHERLNDMWEIVRESIPKRWTEPIPVLVFACNRPAAIRDHLEKLIR LRPSKESFPITVSQDCDSSKVADEVKKFGDQVEYIKHTPGINANIKVPPRFKKKKSYF YISRHYKLALTHMFSKNPYSTVLITEGRIMNSNFNLIIYPNLSDDLDIAPDFFSYFSS TRHLLEKDPNLYCVSAWNDNGKLEHIDWNANATLYRSDFFGGLGWMMARRQWEEFEPT WPAVFWDDWMRDPAQRKGRQCIRPEISRTGMMIHGKKGVSNGQFYADHLSKIKMSNFS INFEELNLNYLLPNNFKNKMDKDLADAVLVELENITSSSWKPEVKNLKVKIVYTGKAH FVNITKELGIMNEFRSGIPRTAYNGIVTCFFKKTRLFLVPDRSKVPIYD" CDS join(173478..173681,175656..175769,175814..175910, 175951..176303,176361..176537) /gene="CBG09784" /locus_tag="CBG_09784" /standard_name="CBG09784" /product="Protein CBG09784" /note="contains similarity to Pfam domain PF00024 PAN domain contains similarity to Interpro domain IPR003014 (PAN-1 domain)" /note="Predicted" /db_xref="InterPro:IPR003609" /db_xref="UniProtKB/TrEMBL:A8X9M4" /protein_id="CAP29339.2" /translation="MLHTINSFLLPLLLILSSFESVESSASTDTKNVKNGGAKPPNLK LLECFEFKKNYWIVGHAFHTSSVQFKDECLRMCLTSSIRKAKCLSAMHVPNDDECVIS DQNQVTKPDLFIENDTPGSFTVNFFRNICVDPPDSEGANRFEARLQGYKGGEGIIELA QTSGRNTQVMVVISGLKENSVRLDSSAQTLKNTNQLYEVALLPGRSDEKGGKCHKKAR VDGEEKTIMTLETDHTGMAVEPWRNMDLDIFEENVIGLTAIVVENSSRTIVDCGPIRL ASSSSSNSSSTQVSSSEKSEILFFSTGLSLILSVFLFM" CDS complement(join(176686..176847,177268..177518, 177568..177749,177801..177862,177910..178455)) /gene="CBG09785" /locus_tag="CBG_09785" /standard_name="CBG09785" /product="Protein CBG09785" /note="contains similarity to Pfam domain PF00650 CRAL/TRIO domain contains similarity to Interpro domain IPR001251 (CRAL-TRIO domain)" /note="Predicted" /db_xref="InterPro:IPR001251" /db_xref="InterPro:IPR036865" /db_xref="UniProtKB/TrEMBL:A8X9M5" /protein_id="CAP29340.1" /translation="MGVKTEFRSSEPISDLEKSQINSVRAMLQEKLPNGIPDDVNTDL NLCRWLRGYHGDMEKIVKNFATYLASRKAAGFVGDDFAEKFFELPDIEPFLQYIASSR LQDRQWSDEHNAFLFVERAWSQPKEFIKTFKTSDYLLHCFGYSEMLQQLILRREKKQS ADKGPVQFIVIFDLNTVNITDYVNPMSGYMKLWQIRSELWQDWYPEMVQRIYLTNPPR LLGLLWKVARVFLSEENLKRIEIISHTPDLAGKFLPAWLVPKEYGGEFVNTVPPGDET GVSIRRKITSADYYKPYLHYKSHGIERPKPSHKDVSPSDKFIFKIQVPKDKKLLWDFT ASGEVQFAIYRGNNRNDLVFPSLHLITNKLNEEGTLNDVSDSEVSFEFQNLSGYFTLK LEYTVAIV" CDS join(182362..182441,182471..182687) /gene="CBG09786" /locus_tag="CBG_09786" /standard_name="CBG09786" /product="Protein CBG09786" /note="Predicted" /db_xref="GOA:A8X9M6" /db_xref="InterPro:IPR031770" /db_xref="InterPro:IPR038204" /db_xref="UniProtKB/TrEMBL:A8X9M6" /protein_id="CAP29341.2" /translation="MSTLRLLYLFAFFFISISQITGQDLHSCQSSLYHKLCRSGIRRF SKNVQNLKSRFQHCATGYCEKRGNRPTCVCSRCDKGGNIPFGSILDAAGKFIQG" CDS 190859..191053 /gene="CBG25875" /locus_tag="CBG_25875" /standard_name="CBG25875" /product="Protein CBG25875" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHN0" /protein_id="CAR99386.1" /translation="MFVIHRKHFEIFFPGKNSEISAAELKKSSKKFKPMACQILPFPP RRYTTLRWISSPNAYKKEGR" CDS 193744..194199 /gene="CBG25876" /locus_tag="CBG_25876" /standard_name="CBG25876" /product="Protein CBG25876" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHN1" /protein_id="CAR99387.1" /translation="MPNSPDIQRRCLRVRRQSESSLNTTRVSNSNIQQKRRESTSGAV NAKKKRKRNSYQHKTTQYIKPCDKIFHWSIREVDESSYLEEKGLRFSGAEIKLEEKRV ELAVKTVLKEKADFVEKEFATLFLDDDSDDIDCSYHLSEDEDVADKAHW" CDS join(194295..194426,194470..195110,195152..195584, 195638..195677,195731..196035) /gene="CBG09790" /locus_tag="CBG_09790" /standard_name="CBG09790" /product="Protein CBG09790" /note="contains similarity to Pfam domain PF00856 SET domain contains similarity to Interpro domain IPR001214 (SET domain)" /note="Predicted" /db_xref="InterPro:IPR001214" /db_xref="InterPro:IPR026489" /db_xref="UniProtKB/TrEMBL:A8X9M7" /protein_id="CAP29342.2" /translation="MKFVEPLTENIYCDDELQLSHFPQFGEFPDEDIDYEAINAFLHR TFPKGVHGNWRNKSETSEEMFYKTLIALLPGTKNIDLLHHALYETFPSYGGLKDIHET FDRLHKKYSNGKDNLEILKVLDSLKDSMKTELLPYSKKFPFDVKYPDTRKNYIVRYIK IGEKECSENCYLNDYEVITRMEEFLEETDSKELKLYILKSTKRQFSDFLNMLLMRDDK GVVKNFCQTAKLFPNVSCSSWFKSLLDSASYADAMGFQQKSYANRMENFRHAQKEDKK KRREKNKGKDKKYEDYTTLCDHLGPCGPGVRNCPCKRFCTVFCNCDFNCNRKFPGCEC PPGMCQTQQCPCFEIDFECSELTCRQCVEDDTLELSSCDNYEMTKGGLKKILVGKSKI AGNGAFLQEDEGERRGIFHLLNISLAECGDVDAMRAGNVLRFLNNSDEPNCYIKYKYV KGDLRIGFYTLKAMKTGQELFINYRYRPEAAAMFFGVPPFDRLPRIKKYIPTKEEKKE NQTQKPKK" CDS join(201798..201926,202112..202201,202255..202500) /gene="CBG09791" /locus_tag="CBG_09791" /standard_name="CBG09791" /product="Protein CBG09791" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9M8" /protein_id="CAP29343.1" /translation="MQNESSEEAPPLLPPKVPPRTHPIHVRNLLKLQYIEQSLSPNME PHADDVASCHSRKASSVGFVEIDDLMKFQEEYKTRSSTGFYSSLRNIFSTGNTASATT SSSIPESHINPMFPVHKCSFSRSFTVLPYPPKKKRKSHLRRVFSCFSIFKHH" CDS complement(join(202844..203002,204586..204854, 204909..205199,205521..205608)) /gene="Cbr-rsu-1" /locus_tag="CBG_09792" /standard_name="CBG09792" /product="Protein CBR-RSU-1" /note="C. briggsae CBR-RSU-1 protein; contains similarity to Pfam domains PF00560 (Leucine Rich Repeat) (4), PF12799 (Leucine Rich repeats (2 copies)) (3)contains similarity to Interpro domains IPR001611 (Leucine-rich repeat), IPR003591 (Leucine-rich repeat, typical subtype)" /note="Predicted" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR003591" /db_xref="InterPro:IPR032675" /db_xref="UniProtKB/TrEMBL:A8X9M9" /protein_id="CAP29344.1" /translation="MPKDKKKEEVTEVEHVDRNITLFSQVSHMIEAETITRLTLSHNK LTALPANIADLISLTSLNLWNNQIEELPSSISSLPKLKILNIGMNKLTILPRGFGSFP VLEILDLTYNNLSERSLPGNFFFMKTLRALYLGDNDFEMLPGDVENLENLQVLVLREN DLLTLPRELGKLTRLRELHIQGNRLAMIPPELGNLELIGSKLVLRLEHNPFIPRLQEQ FDANGAAGVWSHIRTDDYRYFFGRQEPSSTPVPPKRNKEKKVSRKGIQQA" assembly_gap 208353..208377 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(209052..209114,209220..209423,209612..209650) /gene="CBG09793" /locus_tag="CBG_09793" /standard_name="CBG09793" /product="Protein CBG09793" /note="contains similarity to Interpro domain IPR020309 (Uncharacterised protein family, CD034/YQF4)" /note="Predicted" /db_xref="GOA:A8X9N0" /db_xref="InterPro:IPR020309" /db_xref="UniProtKB/TrEMBL:A8X9N0" /protein_id="CAP29345.1" /translation="MSDPCECFFDHESAMQRLLAMLRNSQADCTDTGCDNDGLSGGGG NTMFMWTLLWTFMAMALYVMRPNSMRSGTRPEDAVEKPTGSAGNNDNNPPPPPPSVM" CDS complement(join(210588..210730,210801..211011, 211071..211190,211237..211363,211434..211536, 211597..211709,211755..211844,211889..211974)) /gene="Cbr-pph-6" /locus_tag="CBG_09794" /standard_name="CBG09794" /product="Protein CBR-PPH-6" /note="C. briggsae CBR-PPH-6 protein; contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase domain), IPR006186 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase)" /note="Predicted" /db_xref="GOA:A8X9N1" /db_xref="InterPro:IPR004843" /db_xref="InterPro:IPR006186" /db_xref="InterPro:IPR029052" /db_xref="UniProtKB/TrEMBL:A8X9N1" /protein_id="CAP29346.2" /translation="MIDRVAENILRVSVCDEGELEKSTSHLIGSRKIEPEQWITWASE CKYLPESDAVALCATLIDRLSMEANVVPVSSPVTICGDIHGQFYDLLELFKTGGTVPN TKYVFMGDYVDRGHYSLETVTLLFCLLLKYPNHITLLRGNHESRRISNVYGFYDECQN KYGHGNVHKWFCKVFDVLPIGALIDDSVLCVHGGLSPDIRTIDSLMLLDRAQEGPLCD IMWSDPDDEVEDWVISQRGAGFVFGARVTEEFLVNNNLSLLCRSHQLVDEGFKYMFGE KLATVWSAPNYCYRCGNAAAVFEIDGNKRSTKYFNAVPDGNREKPDRVVAPYFL" CDS complement(join(212298..212399,212448..212777, 212825..212952,213002..213105,213154..213203)) /gene="CBG09795" /locus_tag="CBG_09795" /standard_name="CBG09795" /product="Protein CBG09795" /note="contains similarity to Pfam domain PF01025 GrpE contains similarity to Interpro domain IPR000740 (GrpE nucleotide exchange factor)" /note="Predicted" /db_xref="GOA:A8X9N2" /db_xref="InterPro:IPR000740" /db_xref="InterPro:IPR009012" /db_xref="InterPro:IPR013805" /db_xref="UniProtKB/TrEMBL:A8X9N2" /protein_id="CAP29347.1" /translation="MLRKGVAFVGQAVRQTLKAQNQLQVQRFSASAAQSSEEVNYEIK KNGKRLSGVDYEEVVLTSISSEDKTLIPKAAFDVLLKEYDEVQTESKDFKDKYQRSLA ETENVRRRGIKQTDDAKVFAIQSFCKDLLEVSDILDIAVKSVKPEELESGGKALKDLF EGVSMTRTVLAKTFAKHGLVTVDPTNQKFDPNLHEAVFQIPSANAKQPVGHIEVCTKI GYSLKERPIRPAQVGVVSQ" CDS join(213521..213540,213584..213680,213725..213886, 213932..214025,214073..214204,214250..214533, 214580..214709,214752..214976,215020..215143, 215188..215296,215560..215673,215726..215895, 215945..216299,216343..216408,216458..216538, 216585..216845) /gene="Cbr-spe-41" /locus_tag="CBG_09796" /standard_name="CBG09796" /product="Protein CBR-SPE-41" /note="C. briggsae CBR-SPE-41 protein; contains similarity to Pfam domains PF08344 (Transient receptor ion channel II) , PF00520 (Ion transport protein) contains similarity to Interpro domains IPR005821 (Ion transport), IPR020785 (Ribosomal protein L11, conserved site), IPR013555 (Transient receptor potential II)" /note="Predicted" /db_xref="GOA:A8X9N3" /db_xref="InterPro:IPR002153" /db_xref="UniProtKB/TrEMBL:A8X9N3" /protein_id="CAP29348.2" /translation="MPKSRLLVVKENLSKYRTIDGEREEGFDGHQEWNDEDPLLLDAI SYFYKAVKNKFYSEVRSFLSYLLPLGSEDGRLQAIQSLLLNTSSEESLKEALLLSVAT GSRPLVEFVLALFIDCPFLERSGCANSAHFPPHMTPLMLACILNNFSIVQCLLLRGHT IQIPHFLTCECRLCKRQTVTNRSPALLVDVMRAISSESYLWLATSDVFASACSIAHDL QHLIKDDCLEHVEIYRHLEANVQRFLTRVSDQAWRSEEFNLLVANKSYCDKRMSDISS PRLQMAMDSEMRQFTCSTNSQTAFKSVFRADWLNFGNKPKRDLWRSLRATIFMPVIIM MHMISLEKGTTMAVPLARFIAHITTYIIFLILAIARVTIPFYIDGFDGIVVTQTIEYL IYAYMLGLFLERGLLFYRVGSAAFFAFWWRWFDVVLISSFLISFVFFIGTLSERELFD PSEIDRMHWPSGEFKLIHEIFLSISCVLGVSKCFYYIQTIKGIGGSVISIGKCVGKTY TYLLIMATIIISFSVGLNILVSPYLSRKSIHKENTPEAITTQSYDSIGTSSKNLFWSI FGYLGPSTYVTVVGNTGSNMDPVSHQLNSATLEILGALYHGIIIITVLNLMTSLLVKK ADEVLDNEEMEFKYTRAAMYAEFVSWEMAAPPPFNLFCVIAHSLHRNLNRSLEQKPAK NQDEVEIEVQYLSLLITMFNRFCAAKECKYKTIWRSEFDKEEKPPNHVSFMSSGLHAY SMDNTYEGWRKRETRRMFVPEYEEYGNESNKEAPRPEAPKASTDTSKTMPTADSNRMA AKGITFLPV" CDS join(223540..223650,223705..223812,225335..225600, 225686..225826,226198..226332,226380..226496, 226580..227264,227320..227457) /gene="Cbr-nac-3" /locus_tag="CBG_09797" /standard_name="CBG09797" /product="Protein CBR-NAC-3" /note="C. briggsae CBR-NAC-3 protein; contains similarity to Pfam domains PF03600 (Citrate transporter) , PF00939 (Sodium:sulfate symporter transmembrane region) contains similarity to Interpro domains IPR004680 (Divalent ion symporter), IPR001898 (Sodium/sulphate symporter)" /note="Predicted" /db_xref="GOA:A8X9N4" /db_xref="InterPro:IPR001898" /db_xref="InterPro:IPR031312" /db_xref="UniProtKB/TrEMBL:A8X9N4" /protein_id="CAP29349.1" /translation="MSLSLHLSGWPENSESRQRMLESSSSTNFVQHFVSREVSNKERL LCLLRRMKNGLVLVLTPLLFGQMLWWEGPEWRCAYCVCIIAIYWMSEVMPLAVTAMLP VVLFPLVGVLDANTTAKEYMNDTNFLFIGGLIMAAAVEKCDLHERVALSVLRLVGSEP KWIMLGFMTVTALLSSFISNTATTAMMVPIGQSVVQQLISSFQHHPTNGERGRQGCKK MATGLVLSICFAANIGGTGTATGTPSNLVMLGQLNALFPKVDGSLNYVTWIFFAYPLM LLCLGVAWATLVWFFLRDAPEKDEAVTEMLNTRYRELPRMTYAEKSVFVCFCILLSLW IFRNPGIVPGFSVFFKKGAYTDATSAMIVSFLLFVLPSEKPDIASYIKKEDLKKRGCL MDWKTMQETFPWSVVLLLGGGFALAAGVKESGLSLLIGTSLSSIEHLPLWILQLLTML IAMVITNICSNTVTASIFVPIVATLAQRAGHHPFTLMLPTTLASSFAFIFPVGTPPNA IVFGSGMVKVSDMAFVGGIISIELLILTVMYMNSIAYLTLPLLEFPTWAVIVNSTVTP " CDS join(229415..229613,233924..234130,235044..235271, 235401..235516,235564..235809,235860..236049, 236106..236195,236402..236554,236747..236831, 236887..237036,237088..237152,237965..238096, 240730..240882,241614..241701,242272..242333, 242858..243148,243196..243511,243563..243920, 243971..244073,244117..244263,244315..244384, 244433..245532,245578..245871,245920..246100, 247414..247679,247727..248041,248086..248388, 248939..249979,250026..250466,250517..251293, 251340..254026,254074..254244,254247..254269, 254520..254784) /gene="Cbr-mua-3" /locus_tag="CBG_09798" /standard_name="CBG09798" /product="Protein CBR-MUA-3" /note="C. briggsae CBR-MUA-3 protein; contains similarity to Pfam domains PF00008 (EGF-like domain) , PF01390 (SEA domain) (2), PF00092 (von Willebrand factor type A domain) , PF07645 (Calcium-binding EGF domain) (15), PF00057 (Low-density lipoprotein receptor domain class A) contains similarity to Interpro domains IPR018097 (EGF-like calcium-binding, conserved site), IPR006209 (EGF), IPR000152 (EGF-type aspartate/asparagine hydroxylation site), IPR006210 (Epidermal growth factor-like), IPR002172 (Low-density lipoprotein (LDL) receptor class A repeat), IPR001881 (EGF-like calcium-binding), IPR000082 (SEA), IPR013032 (EGF-like region, conserved site), IPR002035 (von Willebrand factor, type A)" /note="Predicted" /db_xref="GOA:A8X9N5" /db_xref="InterPro:IPR000082" /db_xref="InterPro:IPR000152" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR002035" /db_xref="InterPro:IPR002172" /db_xref="InterPro:IPR009030" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR018097" /db_xref="InterPro:IPR036055" /db_xref="InterPro:IPR036465" /db_xref="UniProtKB/TrEMBL:A8X9N5" /protein_id="CAP29350.1" /translation="MQAGTMLFLKLFIPITIFYPSIYCSNSTTTQICVARQEFQCKID RSCISMKKWQDGVDDCYDGSDEVCLPWQFDCQFGSPRCISKNKLNDRKIDCYSGFDEG CPAHYFVCRDRSACIEPAKYLNGVADCIDKSDEPCAQNQFQCADGTKCISKSQFQNGK EDCDDGSDEECTTSQFACQCGRVRCVAESFIMDGNWDCEDGSDEFINKTIAANCTRNN KVNIATSYLSLGKLKFCSGKNPCKPELGQACVVIGGTWRCVCKLGTFRPLGSEKCIPI ELLTRYRNAPSSNCSITIEEQFGLLNGFRKNDISKTQLERWSNIRRAPTRTLSGTTPG NSGSDGFLESGTERIPFMFQEEEKNYVSVIPDEIIDSYGTIMTPPELKFNRDDIQCGN KTCGLHERCQRNKEGKYECECAEGFTMFGGTCQELIDECRQAKHDCHPEARCVDALIG YECLCREGFLDTSVEPKTRPGRKCRKLVNECTNASQNDCHQNARCLDKPIGYTCRCQD DYVDVSSQGARKPGRNCTKAINECALNLHNCDPHAICQDQPIGYSCRCPFGFIDASTT AMEPGRKCVTADESINSTKTSQCFKNSSGDTVCQCLPGYTNFGSKTHLDCQPEKRANP CQDYSLHDCDPVAECFSEQPGYFQCQCPKGFTDASTDKRFPGRKCVRAVDECALGRHT CDPHADCIDTHQGYTCKCRSGWSDTSLDPLRNPGRNCRKADMCSNIDCAAEAECRETP IGPMCQCVSGYVDVSRQHGRPTGRVCRAVVNECAEGRHDCSSHATCIDTADGFTCRCK DSYRDESADTVKHPGKVCVRTVIPDPPECDVSDPMSCDPGKREVCIFVENTYKCRCAN GYSRLPDGRCVVINECAEPRLNSCGKNAECIDLAEGYTCQCRSGYADISPASQPGRIC RARVNECSNKEKYNVDCSENAICVDTEHSYTCRCRPGFADVSASFNKLPGRRCIEAIN ECASPSLNDCSKNAFCEDAKEGYICSCRPGYVDNSPNAARHPGRICTKPVEQIKTDLK DTSFSTDDGCDPKHPKCGANEACISRHGQHTCECIETAFRYTDGSCRVYSACSKINSC DKNAICLNRFDSYTCQCRPGFIDLSADLANAPGRICKELINECASSDNECSPYARCID ATNGYACQCLDGFIDVSSRYNKPPGRHCTNSNNECSEKSLNTCDENADCVDTPDGYTC QCYGGFVDVSSNANLPPGRVCTVQTTCPKQKTDLVFLIDGSGSIGSYVFKNEVLRFVR EFVELFEIGRGKTRVGLIQYSDQIRHEFDLDQYGDRSSLLKGISETQYLTGLTRTGAA IQHMVQEGFSERRGARPQQNDIARVAIILTDGRSQDNVTGPADAARKLSINTFAIGVT DHVLASELESIAGSPNRWFYVDKFKDLDTRLRSMIQKAACPSPTKQETPIDDVCNPRT QTGCDRSLNEHCAVDGGRPRCVCPEGFTRHPLTRVCGGDLCNPQLITSCIFPEECQIT PYKNFRCACPDGYNRDYRSGFCVSVKEVHISPQHDANCHNGGLRCSENERCTNDGSDW FCECLPGFERIRNGQCAYPGSCNPNDPMSCDVRKRQQCLPHGNIYTCQCGRNERRHPI TDICLKNECLTGEHDCDRSARCIDTDESYICACLNGFIDHSPNPAERPGRVCVALQNE CLDGSNRCSPNALCTDTEEGYVCRCKSGFVDYSPNPQTFPGMVCKELVNECANPRLNQ CDRNAHCIDTIEGYSCICKPGFVDMDEFGNPGRRCEKIKTNDKCSAGKNDCDRNARCI QVGDDDYSCACPPGFKDKSPSPSRLGRLCIPVIPECDNPTLNDCDSPDRAICTDTDDG YMCRCRQGFLDISPSILVKPGRLCKPLQNECALGADDCARDGGICEDTPDSFTCRCAM NYLDVSFDRVTRPGRKCKRLINECQTGQNDCSEEATCTDTEDSYICACPQSHIDLSPD TINRPGRRCLLRINECTSNRHDCSPNADCIDTPESYKCRCRDDFVDESPDTSRRPGRI CRPALLDECRAQKHDCHVNAICQDLPQGYTCQCSQDFLDVSPHRSTHPGRLCQPRPTP PPPECRLDGPNQCKVHLNEVCRIIGGEPKCSCPVNYQRDSSGSCSVINECLFAQLNDC HTAADCIDQVQGYICQCKNGFKDIGDRKRPGRMCKPMVNECQYPHLNDCHQHASCIDL DEGYECKCNQGFMDHSHGRPGRICKQLINECSRPSLNSCDRNARCIDKEEGYDCECRD GFIDVSPSPTLKGRACRELVNECANPRLNDCDKNARCKDIMDSYECDCPVNSKDISPS PSFPGRVCLMFINECETGVHDCDPSATCRDNEQSFTCECPNGFVDRSPNKLARPGRVC VKLVDECREGRHTCSNHADCRDLEEGYTCECRDGYVDRSPNLASQPGRVCSAPEVCPP DHDCSSAAVCEPLGGMKYQCVCIQGYVDQSPGSQKGRVCVRNNACHDPRLNTCSRNAI CYDEPRGYRCECKRGFIDRSPDSSQRGRVCEPPPPPSPPPRHPCQDPERNDCHPAGTC RDTGAQSYTCECLAGYADRSPSPLAKPGRLCVLTEPICLDPEQNDCHAAAICSEVNDP EKYTCKCRDGYTDESPDPLRRPGRICKGMVNECLDRSLNDCHSLAVCKDLPNGYTCQC PINAKDQSPDPRKPGRICSLSVNECANPSLNSCSAFADCIDQENGYKCRCRHGYHDDD PSHPGHRCSFMINECDSSNLNDCDRNANCIDTAGGYECTCKAPYRDEGPPQSPGRICR LNECLDSNRNTCDRNADCRDLDYGYTCTCRHGFYDQSPNPQEPGRICIEFQQEEHIER VKVTTVQSEPRREFPCGRDDCIKARGEVCISGEYCGCKPGEGRSASTGKCQPVQENPF ELRVVTRDQRPLMYSTEFGSQKSPAYVEIVELFEKNMARTFGGTSLAPRYVNTKVDYI THPKTKNSSWDQGLLFKYEVQTTKSQNQPIDECELWKQMQASLDRTNGAIGGGSLRVA SDTDLLNPCKQQEEWGNCGGMSCREHLKEICIAGHICGCPNGMKRRDANSECRVVESW NVPLWVVRDKEKPIVFSESFDNPQTPVYKDYSKRLEKGIEGCYPHTELRNAFVTAEVN DIVNPVLLNASYDTGLMFNTTVHFRKGMVHVPSDAYYQLVKYITKENNNEVGDSELYL NPTQPNPFNPCFKNDCDPHGKCIETSKYTYKCECGVGYRDINPQTPGKKCLPVHGFNE CERKEDNECSENARCIDLEHLYKCECLPSYYDNSPVGSVPGSLCVLDYCSDVNFCPTN TTCKNMEQQAECKCDPGFMDIRKSEKRTALMLGDDTLCMHVRDVDECALGLNNCSGVA HCIDKAVGYTCKCPEGYIDGNPDEPGRVCGALLCDLCNAHGDCVHNTATNNITCVCTD GWTGPQCQVAPSNASLVLLILLALLFLLLTLCCLLYFCTKCHCFKGRPFAGAGANGFG YRRGGAWPWSTLEGSSSSESGAMSAAGNEYYPDMMGIPRAKLKSGGMMASGAANESRS MEVARLDQYLDENAVRIPRAHLVDGHGEHSFDSMSEASSEYTIKEEIERKVITDVTTK EIKTTTTTDEQGNTTVTTTEAVHPRDTTVIHGGGYMQNESSSSSFSGGERIYQSQSSQ QQQQQQSMAQSMAQRATSAGYSSSGMESSAHNSGYSIRNTGERERGDSVEEFSIGRAR GMTAARGYEHTSSENREVEEYCSEEEDVEHSVGDRRTIVNKSHSFEPFVNGESERYKT EVVTSQTSTSVTKK" CDS complement(join(246175..247026,247078..247092)) /gene="CBG09799" /locus_tag="CBG_09799" /standard_name="CBG09799" /product="Protein CBG09799" /note="Predicted" /db_xref="InterPro:IPR006149" /db_xref="InterPro:IPR006150" /db_xref="UniProtKB/TrEMBL:A8X9N6" /protein_id="CAP29351.1" /translation="MNKIWIVSLCLIAVAASQEFGSYSGGQRTFIGYIGGGKAKKCST GADCGSTQVCADGICVVDNGYGGRCSADAYCPNGFICVDGKCQESRRFAKTCPFVCPR GTVCTNGSDRCVAVPSNFVGAGPCPIRCPDGQVCKNGACVPFFSSFVGALSCPIRCPD GQACRNGVCLPILTNFVGAGPCPIRCPDGQACKNGVCLPFRSFADKPCSTGADCEASQ FCVDGKCVVDNGYGGRCSADAFCPNGFICINGKCAKSKRHFTLPCTAPCPPGQKCING ACVGIDMFNIFY" CDS complement(join(255468..255570,255618..255696, 255739..256265,256309..256462,256508..256969, 257052..257181)) /gene="Cbr-unc-47" /locus_tag="CBG_09800" /standard_name="CBG09800" /product="Protein CBR-UNC-47" /note="C. briggsae CBR-UNC-47 protein; contains similarity to Pfam domain PF01490 Transmembrane amino acid transporter protein contains similarity to Interpro domain IPR013057 (Amino acid transporter, transmembrane)" /note="Predicted" /db_xref="GOA:A8X9N7" /db_xref="InterPro:IPR013057" /db_xref="UniProtKB/TrEMBL:A8X9N7" /protein_id="CAP29352.1" /translation="MSSNRFQNLQNWTNKHVFSNSLDYWNQEMHDVPSYQNQQTSGEG SNQRPDHLEIIQEIAISEQPLPDDVPKQQEPVDDGHGASSEPISALQAAWNVTNAIQG MFIVGLPIAVKVGGWWSIGAMIGVAYVCYWTGVLLIECLYEDGVKKRKTYREIADFYK PGFGKWVLAAQLTELLSTCIIYLVLAADLLQSCFPSVDKPGWMMIVSASFLTCSFLDD LQIVSRLSFFNAISHLVVNLIMMIYCLSFVSQWSFSSITFALNINTLPTIVGMVVFGY TSHIFLPNLERNMKNPSEFNMMLKWSHIAAAIFKVVFGMLGFLTFGELTQQEISNSLP NQSFKILVNLILVVKALLSYPLPFYAAVQLLKNNLFMGYPQTPFTSCYSPDKSLREWA VTLRIILVLFTLFVALSVPYLVELMGLVGNITGTMLSFIWPALFHLHIRQKALNNFDK RFDQGIIIMGCSVCLSGVYFSSMELLRAINSADS" CDS join(258708..259069,259131..259209) /gene="CBG25877" /locus_tag="CBG_25877" /standard_name="CBG25877" /product="Protein CBG25877" /note="Predicted" /db_xref="GOA:B6IHN2" /db_xref="UniProtKB/TrEMBL:B6IHN2" /protein_id="CAR99388.1" /translation="MIHYLFRTTQNCPHSSSAPPIWRTKGEPKNDTGIVLCRSIIVKC INFFPSISPSVLSESTPPERKRRHPFVCVARALFFFLLFYVFFFSSTRLLLSRVDPHP FASQEKSVYRSKKKKKTTEERESSADRSFIFCFALLPICLFGLP" CDS join(259553..259676,259730..259998,260372..261144, 261190..261546,261590..261807,262201..262304, 262357..263379,263432..263635,263681..263788, 263841..263912,264527..264580) /gene="Cbr-epac-1" /locus_tag="CBG_09801" /standard_name="CBG09801" /product="Protein CBR-EPAC-1" /note="C. briggsae CBR-EPAC-1 protein; contains similarity to Pfam domains PF00610 (Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)) , PF00027 (Cyclic nucleotide-binding domain) (2), PF00617 (RasGEF domain) , PF00618 (RasGEF N-terminal motif) contains similarity to Interpro domains IPR008937 (Ras guanine nucleotide exchange factor), IPR001895 (Guanine-nucleotide dissociation stimulator CDC25), IPR000595 (Cyclic nucleotide-binding domain), IPR019804 (Ras guanine-nucleotide exchange factor, conserved site), IPR000651 (Ras-like guanine nucleotide exchange factor, N-terminal), IPR000591 (DEP domain)" /note="Predicted" /db_xref="GOA:A8X9N8" /db_xref="InterPro:IPR000591" /db_xref="InterPro:IPR000595" /db_xref="InterPro:IPR000651" /db_xref="InterPro:IPR001895" /db_xref="InterPro:IPR008937" /db_xref="InterPro:IPR014710" /db_xref="InterPro:IPR018490" /db_xref="InterPro:IPR019804" /db_xref="InterPro:IPR023578" /db_xref="InterPro:IPR029071" /db_xref="InterPro:IPR036388" /db_xref="InterPro:IPR036390" /db_xref="InterPro:IPR036964" /db_xref="UniProtKB/TrEMBL:A8X9N8" /protein_id="CAP29353.2" /translation="MERMVSRVRRLSPLHTFSDALLISLFSESDFQPDNIQQGVVLFE KDEPTEYWYLLLSGEVQLYSKTYVSPSNFYLESSIFVQVGDFKHLKTLRCGSLFGDLS TLTHSCSCLVSRPAQLIKIAQNHFLSVYNKHGDHLQPFIIIMHDILTDETPMDPQLPM HSSGLFNGQRSNDLMSSEINPNEIVSVSTEGIPTKMILPSLPHRRENRSHRPNQLNHN QNHRTEDRNFIEFHNPTGIEKQVLESGEVLHRKMLTDNHQVIRDITTQHTVIFFRSSQ SEYLNFQRVQNCMIGAEMIDWLLTLFVSTSTTSSSLSRIQMSAIWQVLLNNGMIAHID GEHEFMDKTNSYYRWVQPYRNRNKVAPTIEEVSKSTALLSSIAPETLFLMIVSKPGFE RSPEELEVVYEELTFIKALSHLSTMVKRQLANFVKVEQYIHAGSVVFRQREIGVYWYI VLKGAVEVNVNGKVVCILREGDDFGKLALVNDLPRAATIVTYEDDSIFLVVDKHHFNQ ILHQVEANTVRLKDYGEDVLVLEKVDIPRGAALENSNSCNFNCGYSVMAGKAEKILEY VLETRIDALSDDISEIDLFVEDFILTHDAFMPANTVCNFLKSYYFRTPYRATRDSITD SCTEEVRCKKRVVQFVYIWCSMLKINFFLNPVTNSFVEELFCHVIDDRKRLGGMEEIM TRIGAIRTSRENMQLVLARHPAIVLDCGVLSARTPCPILPSDVCNQIIYLADTTCFVL PIRVDKTAEEICELSRRRMSFSAEPLKLVEVKSNGEKLIFSPTDRAIPTVLSLNSKLY VVNREEIPMLVPMEDQNGPTPTTHSSILHLIDSQELAHQLFLFHLQLLRATDSNELLY QVIGRESFPQSMPFNLDLLVRRFNEVQHWSTTEILLATEDNRVEILKKFIHIATMLVK NETEWFENIFYRAREYRDLLTVFAITLGLSHTSVSRLTLTWNKLPPATFKTFSELENL LDPTRNHRMYRLLVSKIATPYIPFVPLILKDLMFIHQGNKSFYNGLVNFEKMHMFAKI FRNFRQCKSHMNDTTDHQYVEPQSLIRNLRVIDNQKILIQLSYGIEPKTAKRTVTKEI ENNGKRAIDSICC" CDS join(264842..264932,264976..265067) /gene="CBG25878" /locus_tag="CBG_25878" /standard_name="CBG25878" /product="Protein CBG25878" /note="Predicted" /db_xref="InterPro:IPR003582" /db_xref="UniProtKB/TrEMBL:B6IHN3" /protein_id="CAR99389.1" /translation="MFSLKTVALYFLVIMSVFVVYSSAACADAEDGHCAVFAELCNDE NFAAYTAKCAKTCGKC" CDS 267610..267831 /gene="CBG09803" /locus_tag="CBG_09803" /standard_name="CBG09803" /product="Protein CBG09803" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9N9" /protein_id="CAP29354.2" /translation="MVTALSSLSFAMITTSPPTPPSAQRLVEKPAAKLPIPNFFLFVS RFQMYSLVAPILGCSAYLLQNSSPTSFYC" CDS complement(join(268019..268318,268365..268667, 269108..269203)) /gene="CBG09804" /locus_tag="CBG_09804" /standard_name="CBG09804" /product="Protein CBG09804" /note="contains similarity to Pfam domain PF01682 DB module contains similarity to Interpro domain IPR002602 (Domain of unknown function DB)" /note="Predicted" /db_xref="InterPro:IPR002602" /db_xref="UniProtKB/TrEMBL:A8X9P0" /protein_id="CAP29355.1" /translation="MRCILLLVSTFTVLIQCCSQSGGCCKRRTPPPVTCGQSQCQQGY ACGQYGCARRKAFGGLTKRVDGVLVNDDFHEQAELAEASAALRPHDVSHKINVERLTN PNFIFRSCCEARGLPDSCLRHCHFNTYTFNTIESMFNKKDKCPIEAINEIHYCAAQGI DHRECCHSNGVSTTAAGRKCLSFCDQRPNRFIPIDASYLPCYEVFEGIKQCFYQEIKR RASKKFENLELALH" CDS join(269484..269723,269771..270010,270057..270175, 270241..270343) /gene="CBG09805" /locus_tag="CBG_09805" /standard_name="CBG09805" /product="Protein CBG09805" /note="contains similarity to Pfam domain PF01682 DB module contains similarity to Interpro domain IPR002602 (Domain of unknown function DB)" /note="Predicted" /db_xref="InterPro:IPR002602" /db_xref="UniProtKB/TrEMBL:A8X9P1" /protein_id="CAP29356.2" /translation="MNRTIVILLAVFFILSDACGSSGACGCCGCRAKAKARASKRVSG DVIQKFDDKDDGNIFGLKVWNDTKTPITEKNIQLLTNPNHLFHICCEERQLPPACVQK CHFNVYNKEVVSLQLGQELVTTYFEFQLESMFFRTSDCPIEFLPEMQFCAAQGKDHSS CCSQNDVDATTAGSKCLTFCDQRPDVYTPIDYSYSPCLDRFEDMKRCFYDNVKTDATK HFQTKKSAQDKNILY" CDS join(271444..271594,271622..271639,271788..272152, 272208..272387,272513..273373,273432..273746, 274101..275255,275301..276522,276570..277148, 277197..277333) /gene="Cbr-chc-1" /locus_tag="CBG_09806" /standard_name="CBG09806" /product="Protein CBR-CHC-1" /note="C. briggsae CBR-CHC-1 protein; contains similarity to Pfam domains PF00637 (Region in Clathrin and VPS) (7), PF09268 (Clathrin, heavy-chain linker) , PF01394 (Clathrin propeller repeat) contains similarity to Interpro domains IPR016341 (Clathrin, heavy chain), IPR015348 (Clathrin, heavy chain, linker, core motif), IPR000547 (Clathrin, heavy chain/VPS, 7-fold repeat), IPR022365 (Clathrin, heavy chain, propeller repeat)" /note="Predicted" /db_xref="GOA:A8X9P2" /db_xref="InterPro:IPR000547" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR015348" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR016025" /db_xref="InterPro:IPR016341" /db_xref="InterPro:IPR022365" /db_xref="UniProtKB/TrEMBL:A8X9P2" /protein_id="CAP29357.2" /translation="MAALPIKFHEHLQLPNAGIRVPNITFSNVTMESDKNIVVREMVN TVKTFLNWRSTTTGKTLQIFNIELKAKVKAHQNVEDVVYWKWISDKLIALVSDTAVYH WSIEGDAAPVKMFDRHQSLAGTQIINYRADAESKWLVLIGISAKDSRVVGSMQLYSTE RKVSQPIEGHAASFVRFKVDGNQQPSNLFCFSVKTETGGKLHIIEVGTPATGNSPFQK KNVDVPYTADTAGDFPVSMQVSTKQGIIYLVTKQGYVHLYDVESGLRIYSNRISTDTV FVTCEYTATGGIMGINRKGQVLSVSIDEANLVPFVTNQLQNPDLALKLAVRCDLPGAE ELFVRKFNLLFSNGQFGEAAKVAASAPQGILRTPATIQKFQQCPSTGSGPSPLLQFFG ILLDQGKLNKYETLELCRPVLAQGRKELITKWLNEQKLECCEELGDLIKPHDVNTALS VYLRGNVPHKVVQSFAETGQFDKIVMYAKRVGFQPDYLFQLRQILRNSNPDNGAKFAQ LLVSESENGEPLADLSQRLFQIIDCFMEVQAVQPCTSFLLEVLKGDKPEEGHLQTRLL EMNLLAAPAVADAILANKMFSHYDRAAIGQLCEKAGLLQRALEHFTDLYDIKRTVVHT HLLKPDWLVGYFGSLSVEDSLECLKAMLTQNIRQNLQVVVQIASKYHEQLGADKLIEM FETHKSYEGLFYFLGSIVNFSQDPEVHFKYIQAATRTGQIKEVERICRESQCYDAERV KNFLKEAKLNDQLPLIIVCDRHNMVHDLVLYLYRNQLQKYIEVFVQKVNAARLPIVVG ALLDVDCSEDAIKQLIINTRGKFDIDELVEEVEKRNRLKLLNHWLESRIQEGATDAAT HNAMAKIYIDSNNNPERFLKENPYYDSKVVGKYCEKRDPHYAFLSYERGQCDAELINV CNENSLFKNLARYLVKRRDFTLWEQVLNEENVYRRQLIDQVVQTALSETQDPEDISVT VKAFMAADLPNELIELLEKIVLDNSAFSEHRNLQNLLILTAMRADRTRVMEYIQKLDN YDAPDIANIAITSELYEEAFAIFKKFDVNSSAINVLIENVNNLDRAYEFAEKCNQSDV WASLAKAQLKQDLVKEAVDSFIKADDPGAYMEVVNKCSQTEHWEDLVRYLQMARKKSR ESYIETELVYALAKTGRLTELEEFIAGPNHAQIGQIGDRCFDNGMFDAAKILFNNVSN FAKLSVTLVRLGEYQGAVDAARKANSTKTWKQVCFSCVENGEFRLAQMCGLHIVVHAD ELEELINFYQDRGHFEELIALLEAALGLERAHMGMFTELAILYSKYKPEKMREHLELF WSRVNIPKVLRAAEQAHLWSELVFLYDKYEEYDNAALTMMQHPTESWREQHFKEVIAK VANVELYYKAMQFYLDFKPLLLNDLLAVLSPRLDHSRTVLFFNKLKQIPLVKPYLRQV QNLNNKAINEALNQLLIDEEDHAGLRSSIEAQDNFDNISLAQQLEKHPLVEFRRISAY LFKGNNRWKQSIELCKKDKLYKDAMEYAAESRNGELAEELLSFFLDEKLYDCFAASLY HCYDLLHPDVIMELAWKHKIMDYAMPYMIQVMRDYQTRLEKLERSEHERKEEKAEQQQ NNKMTMEPQLMLTYGAPAPQMGYPGAPAGYGGQPAYGQPGQPGFNAPGFM" CDS join(277762..277837,277888..277957,278005..278132, 278182..278393) /gene="CBG09807" /locus_tag="CBG_09807" /standard_name="CBG09807" /product="Protein CBG09807" /note="contains similarity to Pfam domain PF09282 Mago binding contains similarity to Interpro domain IPR015362 (Exon junction complex, Pym)" /note="Predicted" /db_xref="GOA:A8X9P3" /db_xref="InterPro:IPR015362" /db_xref="InterPro:IPR036348" /db_xref="InterPro:IPR039333" /db_xref="UniProtKB/TrEMBL:A8X9P3" /protein_id="CAP29358.1" /translation="MSEKPSGKSKPACSEGGDLRVQTESGDTFITATQRPDGSWRKAR RVKEGYIPQDEQPKYQNRMQLEATNGRSSVPSGANPRAPAGTRKPVSAIKANVCITPQ DHFQKKIDLTKKKIEDIEGMESRIASGELVPQPNQVKKIQRKQEYLDEIEKLTKEMEK L" CDS complement(join(278604..278659,278710..278924, 278970..279042,279095..279161)) /gene="CBG09808" /locus_tag="CBG_09808" /standard_name="CBG09808" /product="Protein CBG09808" /note="contains similarity to Pfam domain PF06320 GCN5-like protein 1 (GCN5L1) contains similarity to Interpro domain IPR009395 (GCN5-like 1)" /note="Predicted" /db_xref="GOA:A8X9P4" /db_xref="InterPro:IPR009395" /db_xref="UniProtKB/TrEMBL:A8X9P4" /protein_id="CAP29359.1" /translation="MSQLSNMLKEHSKKQHLRREVQEKLKNEAVVAAQTLSTAVVDHL NAKVSQAYGNQKRLDVEAKRFENNSAALAKQTEQWLFITEGLNYALKEIGDVENWSQT IENDMKIITETLRRAYEAKNLPAVASPSANPASH" CDS join(279524..279591,279635..279880,279925..280411, 280453..280596,280641..280792,280838..280927, 280993..281170) /gene="CBG09809" /locus_tag="CBG_09809" /standard_name="CBG09809" /product="Protein CBG09809" /note="contains similarity to Interpro domain IPR000615 (Bestrophin)" /note="Predicted" /db_xref="GOA:A8X9P5" /db_xref="InterPro:IPR000615" /db_xref="InterPro:IPR021134" /db_xref="UniProtKB/TrEMBL:A8X9P5" /protein_id="CAP29360.2" /translation="MTVSYNQSVATSRPWTFLALIFRWRGSVWKAIWIQYSVWLGLYF LVSAIYRFILQDYQRQIFVQLVDYTGARLSYVPLDWMLGFFIAGVLRRFWYLYDIIGF IDNIACSTATYIRGDSDRAKQYRRNIIRYCELTQVLIFRDLSMKARKRFPTLDTVAAA GFMMPHEKANFDQIQYNYNKYFLPFNWAWALVYNARKEGLIEGDYYVTVISEDIKKFR TGLAWVCNYDWVPLPIIYPTIVCLAVHMYFFVCVMARQYVKGSENDPNMIDLVFPFMT SIQFVFYMGWLKVGEGLLNPWGEDDDDFETNMLIDRNLAMGLKIVDEGYDKTPRLEKD AFWDDTWVPLYSEASAHEKRYHQRQGSLAHIKLSRSVSQVRMVPRDGRRASVVKERIV NVKPGNGIGDVFRPSSLLNLMKHAASSHSLERQQSPGSFRMDTLSPTSPTTNAKEYES DKRD" CDS complement(join(281458..281937,281987..282307, 282367..282765,282833..283039)) /gene="Cbr-cts-1" /locus_tag="CBG_09810" /standard_name="CBG09810" /product="Protein CBR-CTS-1" /note="C. briggsae CBR-CTS-1 protein; contains similarity to Pfam domain PF00285 Citrate synthase contains similarity to Interpro domains IPR019810 (Citrate synthase active site), IPR010109 (Citrate synthase, eukaryotic), IPR002020 (Citrate synthase-like)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:Q61JF9" /db_xref="InterPro:IPR002020" /db_xref="InterPro:IPR010109" /db_xref="InterPro:IPR016142" /db_xref="InterPro:IPR016143" /db_xref="InterPro:IPR019810" /db_xref="InterPro:IPR036969" /db_xref="UniProtKB/Swiss-Prot:Q61JF9" /protein_id="CAP29361.1" /translation="MPITGTVLRRFITKGVIPMCQVAPLSTSAEGSTNLKEVLSKKIP AHNAKVKSFRAEHGNTVVQSVNIDMIYGGMRSMKGMVTETSVLDPEEGIRFRGYSIPE CQKLLPKAKGGEEPLPEAIWWLLCTGDVPSEAQTAAITKEWNARADLPTHVVRMLDNF PDNLHPMAQFIAAIAALNNESKFAGAYARGVAKASYWEYAYEDSMDLLAKLPTVAAII YRNLYRDGSAVSVIDPKKDWSANFSSMLGYDDPLFAELMRLYLVIHSDHEGGNVSAHT SHLVGSALSDPYLAFSAAMAGLAGPLHGLANQEVLVFLNKIVGEIGFNYTEEQLKEWV WKHLKSGQVVPGYGHAVLRKTDPRYECQREFALKHLPNDDLFKLVSTLYKITPGILLE QGKAKNPWPNVDSHSGVLLQYFGMTEMSFYTVLFGVSRALGCLSQLIWARGMGLPLER PKSHSTEGLIKLAMAAKK" CDS complement(join(283749..284170,284222..284342, 284440..284668,285230..285630)) /gene="Cbr-rde-4" /locus_tag="CBG_09811" /standard_name="CBG09811" /product="Protein CBR-RDE-4" /note="C. briggsae CBR-RDE-4 protein; contains similarity to Pfam domain PF00035 Double-stranded RNA binding motif contains similarity to Interpro domain IPR001159 (Double-stranded RNA-binding)" /note="Predicted" /db_xref="GOA:A8X9P7" /db_xref="InterPro:IPR014720" /db_xref="UniProtKB/TrEMBL:A8X9P7" /protein_id="CAP29362.1" /translation="MSGFSFESVFCGSDAPFRPSMTERPNSPVSKLAKSKAELEMFMR KTPLMVLEEGAKGSFQQTPSWACSEIPNTVGLEFEMTLNLRGKTVKARGNSKKIAKQK AALDYLHHMVNDGKSAEFSIPGETAEEAHANLNTIAERPVEEPKRAAAAVSVKDVDKS IPTAKSFPENVPEKNYVGALQEKCQKHKLEAPAYEDSKIEATSEFMVTCTMGNQQTRG IKPKIKLAKNLAAWLMLKTLEEGVEAVQAFDLTEQFDELEEEEDRATAQKAAFETKDK KSTLIDLLSDKARFADYRMEFVYPSVSTHGVHQVLLNVFISRPVSPDDDLQIGAEHTQ TEEIMKATAEKEREQKKNMPDVTQKTFSGHGPSEEAAQQCACKSALIHYYTFDFTN" assembly_gap 285976..293513 /estimated_length=7538 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(293716..293818,294344..294462) /gene="CBG25879" /locus_tag="CBG_25879" /standard_name="CBG25879" /product="Protein CBG25879" /note="contains similarity to Interpro domain IPR010916 (TonB box, conserved site)" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHN4" /protein_id="CAR99390.1" /translation="MFWSRVQFAARRREDSRPLYRRIFTNRRLDIAHKGVDYYSVLKK KQLQKELDAFERQLKDLDTIIVTGKPQTF" CDS complement(join(294657..295124,295221..295528, 295574..295704,295786..295985,296033..296194, 296272..296392,296440..296991,297037..297167, 297521..297599,297651..297741,297811..297850, 297853..298112,300031..300141,300187..300274, 301148..301207)) /gene="CBG09813" /locus_tag="CBG_09813" /standard_name="CBG09813" /product="Protein CBG09813" /note="Predicted" /db_xref="InterPro:IPR022782" /db_xref="UniProtKB/TrEMBL:A8X9P8" /protein_id="CAP29363.1" /translation="MFGCIAPPRQSRSIIRSCSQDSREFHGDPRFYRPASVDLRQPRH TLTTRERSATPPATLGHHPTHNNKPPKMKRLDKWIGNLLSERELNSVLFQFKRMPLFS WRPRILGGRKTPEPTQAVQITIAPEPPEIPEAQTTSKPRNVRFDDVAKRSNDNYMKER TPTDWTTNNYGGERIIGTVRPEKNLASSSGRLPPEEPSNDWRYADDVKVRIDPIDNQR QLDPQPSRFAQPSRATSVLQSLREQKENLEYDERRREVSTLPSNYSNSRPDMYGTVQR FDTVSRTDSHLTSDSQAARHLDDMNVVFLQANDEVKRTLLPRNMHSMHQVKMAFVRTF PNVNRAFVEQPHVKIYIQEPTKGALFYELEDPGDIKNKSVLRLREKTRVMSPVAYLDQ PDYHSETEQDDGRRGMMPMLRPASAMAAPSVDYMHRNIVQKPAVYDIYSDPYNSDTSS HDSRSVTRSGSATPVIDRESIVRMETMERQLAGLSNLVHTALVSKGMSETTQRDMAEL RREILSMHPDSARESSEEPASSLSDSITSHTAYQLSLLRNKLKETHNELKQLKSSAQV DAQTGNTLLREAGDKIGRLVAEKMRGGTVTAMMEIPNRGRDELDKNTETERNEHASRL ADLLHSLTSFETNVEAVRGCVLSNQKKLRMSEVEDMTEKLTNIGRLAATLKTDFPPIQ MSIEQQIKRDMERVVREEKFIRDQNVAVDQSLRRCKALANIMVTMKKLAMVQDPTIQR RKKGVERADSGAGTPTNGGTPRLPPKPSVAQSIAMQPPQYHSSSIPSPPPPPPLPVQQ SQLTQSLQLAATSSPIVNTSSNFAKVVPLYEYKESPKSPVSVLDNVLEEVGDPNGIPR PPSRYSVQDVRQKFSKPPELPDQLRNLIEDVARRASPGPDQMTDRRQDLEERQERLAE KQRQLRSQFQQLQQLAPLP" CDS complement(join(301568..301864,301912..302412, 302523..302820,303377..303450)) /gene="CBG09814" /locus_tag="CBG_09814" /standard_name="CBG09814" /product="Protein CBG09814" /note="contains similarity to Pfam domains PF00300 (Histidine phosphatase superfamily (branch 1)) , PF00328 (Histidine phosphatase superfamily (branch 2)) contains similarity to Interpro domains IPR000560 (Histidine phosphatase superfamily, clade-2), IPR013078 (Histidine phosphatase superfamily, clade-1)" /note="Predicted" /db_xref="InterPro:IPR000560" /db_xref="InterPro:IPR029033" /db_xref="InterPro:IPR033379" /db_xref="UniProtKB/TrEMBL:A8X9P9" /protein_id="CAP29364.1" /translation="MIYRLLFLYFSVVHAELEMVQVLVRHGDRAPSFTFPLDEPFEVE KYFPRGYSQLTQQGFKQAKEVGTFLRNRYSGLVDGFNRKETLIRSSDKDRCIETAMGI TLSLFPDDIVPVHTFSHYKHDLLLKPNSVYCRRVDELVKDDKKLLNSVVDRHHKELLS FLSEKTGWDVTGSKISDVFNVLYRKYSNNVPQPVWVNEVLSNVTELKRQYRTIQFDSD EKSKMRTGYLLGQITKDMNEQKDSGRRMIVYATHDATVTSMMYSLGISDHKLIPYTAA LILELHNVNNRKHVKIIYRNSTVSPPQEMRLPGCDVLCPMEAYQRFVSNRIVANKEEH DALCQNHIFQNIQEPKFDSSLPQNLPEEDNLLSTTLLTVGSLSYFDLYASMKMKN" CDS complement(join(304231..304444,304490..304578, 304622..304813,304895..305158)) /gene="Cbr-swsn-3" /locus_tag="CBG_09815" /standard_name="CBG09815" /product="Protein CBR-SWSN-3" /note="C. briggsae CBR-SWSN-3 protein; contains similarity to Pfam domain PF00505 HMG (high mobility group) box contains similarity to Interpro domain IPR000910 (High mobility group, HMG1/HMG2)" /note="Predicted" /db_xref="GOA:A8X9Q0" /db_xref="InterPro:IPR009071" /db_xref="InterPro:IPR030089" /db_xref="InterPro:IPR036910" /db_xref="UniProtKB/TrEMBL:A8X9Q0" /protein_id="CAP29365.2" /translation="MSSRGPKVPERPLQPYMRYSRKMWPKVRAENPDAQLWDIGKIVG KMWLETTDAEKSFFQHEYEMEKADYDKQMKNFQGNGMSNYMMSKSRAKNNEKMSRSRM DPGGVVIQPVDEDDGGNEMSTRRLAGVRFERNNRLISDLFSPSIVTDTRNIVPHHRME MLKRQAASLGTHQSKLEEELTKLERAHDNRKRSIEKGSDDFQEQLKKVVSEKPVVDEE KFEQTVKEWEEKLAAAYEEYKKNKTDSATHNGKP" CDS complement(join(306802..306959,307005..307333, 307382..307905,307952..308053,308097..308200, 308311..308588,308633..309099)) /gene="Cbr-laf-1" /locus_tag="CBG_09816" /standard_name="CBG09816" /product="Protein CBR-LAF-1" /note="C. briggsae CBR-LAF-1 protein; contains similarity to Pfam domains PF00270 (DEAD/DEAH box helicase) , PF00271 (Helicase conserved C-terminal domain) contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR000629 (RNA helicase, ATP-dependent, DEAD-box, conserved site), IPR014001 (DEAD-like helicase), IPR001650 (Helicase, C-terminal)" /note="Predicted" /db_xref="GOA:A8X9Q1" /db_xref="InterPro:IPR000629" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8X9Q1" /protein_id="CAP29366.2" /translation="MENNQSNNGSSGNAALNKGGRYVPPHLRGGDGASGGDDRRGGSS GGGGFRRGGGNSGGNDRGYNDNRGNGGYSGGRDRGYEDRGYNNGGGNRGYNNRGDSNR SDSRGGDGGRGGYNRQDRGDGGSFNRGYNNRDGGYDNRGSGRSYSDRRENGGDSQNTR WNNLDAPSRSERGSSKWENRGPRDERIEQELFAGQLSGINFDKYEEIPVEATGDDVPQ PIGLFSDLSLHEWIEDNIKTAGYDRQHQFRNGPDAVHRSVISSGGRKKQYPSALVLSP TRELSLQIYNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLLDVM EQGLIGLEGCRYLVLDEADRMLDMGFEPQIRQVVEFNRMPPKEERVTAMFSATFPKEI QLLAQDFLKQNYVFLAVGRVGSTSENIMQKIVWVEEDEKRSYLMDLLDATGDSSLTLV FVETKRGASDLAYYLNRQNYQVVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARG LDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNRNIARELMDLIVE ANQELPDWLEGMSGDMRNGGGYRGRGGRGNGQRFGGRDHRYQNGGGNNGGGNGGFGGQ RSGGGGGFQSSGGRQHQPQRAQPAQDWWS" CDS join(310052..310129,310177..310265,310312..310633, 310683..310799,310842..311087) /gene="CBG09817" /locus_tag="CBG_09817" /standard_name="CBG09817" /product="Protein CBG09817" /note="contains similarity to Pfam domain PF04127 DNA / pantothenate metabolism flavoprotein contains similarity to Interpro domain IPR007085 (DNA/pantothenate metabolism flavoprotein, C-terminal)" /note="Predicted" /db_xref="InterPro:IPR007085" /db_xref="InterPro:IPR035929" /db_xref="UniProtKB/TrEMBL:A8X9Q2" /protein_id="CAP29367.1" /translation="MIPPHFDVDINQFLITNEDCRIVFITSGGTQVPLEKNTVRFIDN FSMGTRGAASAEYFLRAGYAVIFLHREESLKPFSRHFPNIFNSLTLDSTGQNVVCNLP NLANILKEKFKYEKNIFYASFKTFDQYIERLEHICIHLNPLESRAMIYLAAAVSDFVV TELPTHKIASSTELSLELSVAPKVIERVVNCFVPNAFIVSFKLETDESKLIPKAKAAL NKYGHQLVIANMLSTRKQKVTLVRKNREDGEEIILPAEKINETEIESMIIRRLSGLHQ EFIESKH" CDS complement(join(311178..311303,311350..311744, 311808..312150,312196..312285,312332..312535)) /gene="CBG09818" /locus_tag="CBG_09818" /standard_name="CBG09818" /product="Protein CBG09818" /note="contains similarity to Pfam domain PF03095 Phosphotyrosyl phosphate activator (PTPA) protein contains similarity to Interpro domain IPR004327 (Phosphotyrosyl phosphatase activator, PTPA)" /note="Predicted" /db_xref="GOA:A8X9Q3" /db_xref="InterPro:IPR004327" /db_xref="InterPro:IPR037218" /db_xref="UniProtKB/TrEMBL:A8X9Q3" /protein_id="CAP29368.1" /translation="MASESYKVPEKMIKNVFDLNPWYFSKAYEEYLAFLHRLNDSVVG VHTTADMRCSDLVIDFIDMLDTLEKWIDEIPLEDTSEQRFGNKAYRRFYERLCKEATE LLSRVLPPNTQGALIELVPYFTEAFGNATRIDYGSGHEANFLILLFCLQKMHVFTDND NQVLVLRIFHKYLRVCRHLQMKFKMEPAGSRGVHAIDDFQFAPFIFGSAQLIGSKNLV PDSYLKETVVEANAHLSLFLDCVKFINQTKTGPFHEHSNQLWNISAVPHWKKVNSGMF KMYEGEVLKKFPVVQHMMFGSLFSFDRSETMKESTEDCIPASHDPSMPPIACQMPQRA PAQHGMFSFQIPSVANTSTVRSSSVVESGDLRNLHKEKHPEEHCPPPMAEP" CDS join(313240..313296,313344..313463,313521..313628, 313677..313757) /gene="CBG09819" /locus_tag="CBG_09819" /standard_name="CBG09819" /product="Protein CBG09819" /note="contains similarity to Pfam domain PF02297 Cytochrome oxidase c subunit VIb contains similarity to Interpro domain IPR003213 (Cytochrome c oxidase, subunit VIb)" /note="Predicted" /db_xref="GOA:A8X9Q4" /db_xref="InterPro:IPR003213" /db_xref="InterPro:IPR036549" /db_xref="UniProtKB/TrEMBL:A8X9Q4" /protein_id="CAP29369.1" /translation="MPVQVEVPPTTYERLQQYKEKFSDALRHPDSPDWYKKETHESVK KDLLWAAPYDARFPQVRKQRQCFAYYVDFHRCNELMGQDYKPCKFFQNVYKDFCPGFW TERWDELLAEGRFPAKFDR" CDS join(313938..314054,314098..314326,315568..315641) /gene="CBG09820" /locus_tag="CBG_09820" /standard_name="CBG09820" /product="Protein CBG09820" /note="contains similarity to Pfam domain PF06374 NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) contains similarity to Interpro domain IPR009423 (NADH:ubiquinone oxidoreductase, subunit b14.5b)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X9Q5" /db_xref="InterPro:IPR009423" /db_xref="UniProtKB/TrEMBL:A8X9Q5" /protein_id="CAP29370.1" /translation="MAETTRVSEKELERREGFIRAGHRERHVIDPFTWSYPWKGAGVM LGVSTAALYLQNRWNKKPYYYAIVPRLLLIGAASAMGYAAGALREKHYQTRDAVIEHY MQLHPEDFDHFNDRNGRSFSQVLLPWYPRRTQYTRYD" CDS join(315840..316038,316088..316212,316257..316370, 316445..316555,316606..316673,316726..316851, 316900..317050) /gene="CBG09821" /locus_tag="CBG_09821" /standard_name="CBG09821" /product="Protein CBG09821" /note="contains similarity to Pfam domain PF07986 Tubulin binding cofactor C contains similarity to Interpro domain IPR012945 (Tubulin binding cofactor C)" /note="Predicted" /db_xref="GOA:A8X9Q6" /db_xref="InterPro:IPR012945" /db_xref="InterPro:IPR016098" /db_xref="InterPro:IPR017901" /db_xref="InterPro:IPR027684" /db_xref="UniProtKB/TrEMBL:A8X9Q6" /protein_id="CAP29371.1" /translation="MDSKEKILADRKDRLLAKLEQRNEERKVLNEESVSKTDGDDVDQ LMGDIEKDLKSKTVDSTKIDRLQEYLAFSTNNRQSKAIQNLLEDVRKHKLSQNSGPKF KGFSFSKTPNTTSSSKSSVEVTKPVEVAAILNAPSASENVIEDLKDEKRNISGEKGED ISLKNIENCRLQFDFEPSIVHIRNIKNSTLIFLRCDRSLLIHDCDNVHIYVAAQQVRI HTSQNLHLHVATRGAVILEDSKNVFMYPYRLKSATGDYLTAEDNGEWHAPRDFNWLAT TPSPNWKVVAEEEWTEEQLIA" CDS complement(join(317289..317360,317407..317655, 317707..317787,319638..319700,319748..320351, 320399..320895,320942..321955,322006..322247, 322292..322328)) /gene="Cbr-apb-1" /locus_tag="CBG_09822" /standard_name="CBG09822" /product="Protein CBR-APB-1" /note="C. briggsae CBR-APB-1 protein; contains similarity to Pfam domains PF02883 (Adaptin C-terminal domain) , PF01602 (Adaptin N terminal region) , PF12717 (non-SMC mitotic condensation complex subunit 1) contains similarity to Interpro domains IPR002553 (Clathrin/coatomer adaptor, adaptin-like, N-terminal), IPR015151 (Beta-adaptin appendage, C-terminal subdomain), IPR008152 (Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain), IPR016342 (Adaptor protein complex, beta subunit)" /note="Predicted" /db_xref="GOA:A8X9Q7" /db_xref="InterPro:IPR002553" /db_xref="InterPro:IPR008152" /db_xref="InterPro:IPR009028" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR012295" /db_xref="InterPro:IPR013037" /db_xref="InterPro:IPR013041" /db_xref="InterPro:IPR015151" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR016342" /db_xref="InterPro:IPR026739" /db_xref="UniProtKB/TrEMBL:A8X9Q7" /protein_id="CAP29372.1" /translation="MTDSKYFTTTKKGEIFELKNELNSDKKEKKKEAVKKVIASMTVG KDVSALFPDVVNCMQTDNVELKKLVYLYLMNYAKSQPDLAIMAVNTFVKDCEDPNPLI RALAVRTMGCIRVEKITEYLCDPLRRCMKDEDPYVRKTAAVCVAKLHDMNPTLVKDQG FVELLNDLLSDANPMVVANAVAALTEMNDQQTVIEVNSQMVNKLLTALNECTEWGQVF ILDALAGYTPRDERETQNICERISPRLAHANAAVVLSTVKVLMKLIDMMPADSDFITQ LTKKLAPPMVTLLSAEPEIQYVALRNINLIVQKRPDILKQEMKVFFVKYNDPIYVKME KLDIMIRLAQQNNISQVLSELKEYATEVDVDFVRKSVRAIGRCAIKVETSSERCVQTL LELIQTKVNYVVQEAVVVIKDIFRKYPNRYESIISALCENLDTLDEPEARASMIWIIG EYAERIDNADELLESFVEGFHDENTQVQLQLLTAVVKLFLKRPGVAQALVQRVLSLAT QDSDNPDLRDRGFIYWRLLSADPAAAKNVVLTEKPLISEETDLLEPSLLEQLVCHIGT LASVYHKPPSAFIDPAKAPLRQINPIPTAKFGSSLLDTSSATNASRNGSAPTVIPSQD QVIADLLSLDLNAPATSANTGGYGASMSGTTSMGGLDDLLGLGGDSMPAAPAMASSNN PFDSLAGLGMPSAVPAAQQPASIGGLAEIFGSGGFGASSGYTHPKEMWLEASKAMGMQ VEGTFVRRNGRISMEITITNRAMQAISEFALQFNKNSFGLIPVEQMDQSPILPNQSKN FTIVCDTSGPVQVTTPLTNLQVAIKNNINAFYFATQVPLIVYFREDGQMEKREFLEEW KSIPEQNEQQFSLQNTQNMNADAICTKLQQNNIHTVARRQVDNQQLLYHSVKYTNNLN VLSELKVNSQNTAITLSLKSKNLMAIANMNEVFQSLLN" CDS join(318091..318174,318226..318333,318377..318800, 318845..319140,319188..319571) /gene="Cbr-gpa-17" /locus_tag="CBG_09823" /standard_name="CBG09823" /product="Protein CBR-GPA-17" /note="C. briggsae CBR-GPA-17 protein; contains similarity to Pfam domain PF00503 G-protein alpha subunit contains similarity to Interpro domain IPR001019 (Guanine nucleotide binding protein (G-protein), alpha subunit)" /note="Predicted" /db_xref="GOA:A8X9Q8" /db_xref="InterPro:IPR001019" /db_xref="InterPro:IPR011025" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8X9Q8" /protein_id="CAP29373.2" /translation="MGSLCSREEDGEDAMTTMNGTGKSKTKKESDIIHFFMLGIEGAG KTTIIRQLKCLCMQKPHNYQMYDDSWNLIDREKIFDYYELEGLKNVVRINLLTAAASL IRKARDRDEEFLRSSTAAAAILRKCSQLYEGEVDIYDHSNQIEDEYGGFIIEIISDPQ VVRLLEQPIGVAGLKIEDGTRYFLKDEGRIRNIFTDSYQLTNDDIVHVRKPTVSFKSY KFRIKQLRVEIHDMGGQKSELVSVRFIQSECRNMNLQVKIPQFMRQFLTTSGHCFLLY VSSLAAFQEPDKDSKGRTVLDKSAAIFKLVLEMSGVDECTVMIFFNKQDRFEEICREM LQNDDGEGKRQIEKLLGVPPKLPKNQKEGGKKNKPENYDYLKDSIRNRFKEILKNNND KKSYYMKYTQATDAQLMSTIFYAVENEIISAFFTQARYL" CDS join(323134..323233,323312..323579,324965..325669, 325719..325923,325970..326569,326615..326890, 326965..327360,327410..327510,327563..327892, 327939..328015,328050..328204,328249..328314) /gene="CBG09825" /locus_tag="CBG_09825" /standard_name="CBG09825" /product="Protein CBG09825" /note="contains similarity to Pfam domains PF01171 (PP-loop family) , PF10278 (Mediator of RNA pol II transcription subunit 19) , PF00155 (Aminotransferase class I and II) , PF00266 (Aminotransferase class-V) contains similarity to Interpro domains IPR011063 (tRNA(Ile)-lysidine/2-thiocytidine synthase), IPR019403 (Mediator complex, subunit Med19, metazoa), IPR004839 (Aminotransferase, class I/classII), IPR000192 (Aminotransferase, class V/Cysteine desulfurase)" /note="Predicted" /db_xref="GOA:A8X9Q9" /db_xref="InterPro:IPR000192" /db_xref="InterPro:IPR011063" /db_xref="InterPro:IPR014729" /db_xref="InterPro:IPR015421" /db_xref="InterPro:IPR015422" /db_xref="InterPro:IPR015424" /db_xref="InterPro:IPR019403" /db_xref="UniProtKB/TrEMBL:A8X9Q9" /protein_id="CAP29374.2" /translation="MNEPTSSSSTSNDRTKKKSESSKCFYAFRTGLPDNSEIQGNHDL LTAYGLGPVERAFNGTRRVKEKMSAFLPHVIGELHLDATKEASSLRALIEKPPIHKEI SNLSSSAMQGFKLSAGPVDERDSPLAKKKRMGSRKFAENVPDVSTDDVEKSENWNNSY ELLSWMRNDEIGSDAVMEGPFGPRKVVYCDYTASARSFSSIEKYIQSEVLPFYGNTHS SVTVTAEQTTLFMHEAKQEIRAMSGCGDQDSVIFTGSGSTCAVELLVHLLQSEAGNED VVVIHSIQEHHSNLLPWRKLAKEMRSVEELESGHVDLDNLKAVLKEVRENHGDIKIIG AFCACSNLTGVLIDVQSVTKILKSCNAISIWDYASAAPYIPITFNGETPLDALFFSGH KLPGGVSSPGVLIVKKYLIQATKPKRIGGGTVFFVNDSDEWFLKEVEHREEGGTADAV GAVRLAMAVKMKRAVGEETIKQLEETISRRVFKSFNKTNNLVLLGPSTVEGRLPVLSF LIRSPNSNLFFHHNYISVLLNDLFGIQTRAGCMCAGPYAQKLLGVDEELSREFVNAIQ ESPDLDRTHLRRQAEYSQQEFLRPGFTRISFPYFFTMQQVDDIVSAVEFVAEHASDFL HLYQVNTETGEWHHQNQRVFHGRRWLGYIQFTPSGLKTKAKIVPDVTDMNTCLRLAQT LALEASQSINLSKIPDGRVAVNEKFQRLRWFVLPIEKQSLQGTVFIPRKYSDVPVKQI PEILGKLDEIPKPSENDAKEESTCQVICDDVVCLLKCDDQSTKAGATENVGVDESEAE DVKQMEDWNKRVIVKRIENLRKEEERKQEWQIPPLEMYKKVTDVIHQLKMIRNGDKVL VCLSGGKDSLSLLHILRHYQQRCNKARSTSFQLGAITVDPGSAEFNPRPLIEYCRKLN IDYFYEEQDIIGAAMKTPGLRSICAFCSRMKRGRLAAAAQFHGWNVLAMGQHLDDLAE SFFIAAFQNGNLSTMKAQYTTKDNQLRVIRPLIMVREKALRNFAEEKMFSELPVVAEN CPACFNQATERHRIKQLLAQQELIFPDLFNSLRSALKPLLLVVSAHTSEMRTQAVQNI VNSS" CDS join(328635..328761,328809..328954) /gene="CBG09826" /locus_tag="CBG_09826" /standard_name="CBG09826" /product="Protein CBG09826" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9R0" /protein_id="CAP29375.1" /translation="MRIEIILVLLFVSLAHSCQNFDKYMNMFCKYGAETTPCTVENYS AEKAACCAKNGNCAYSDFPTKSVCCFTDECLKRCYPGKLLKNGQVY" CDS join(329382..329573,329620..330046,330089..330453) /gene="Cbr-ppfr-4" /locus_tag="CBG_09827" /standard_name="CBG09827" /product="Protein CBR-PPFR-4" /note="C. briggsae CBR-PPFR-4 protein; contains similarity to Pfam domain PF04177 TAP42-like family contains similarity to Interpro domain IPR007304 (TAP42-like protein)" /note="Predicted" /db_xref="GOA:A8X9R1" /db_xref="InterPro:IPR007304" /db_xref="InterPro:IPR038511" /db_xref="UniProtKB/TrEMBL:A8X9R1" /protein_id="CAP29376.1" /translation="MSELSDDEVSLQALFEPAKKLISDIEDGVYTTAELQPRLKTGIE NLHSVTKVVNQLKLYSSNEQIEDVPTNSLPYLLVPCFLGIFHQNVIVDASLKLDELRK SKVYLRNFLDRLRNLCLITTKLPWDDEDTEVKDDAGKKTKMSVEEIRRLKLERHKKKQ ELKVAELRIKKQLEAVSIDEQNLRELYITQLQFWCERSHEELQAIEDEIPLLKMMAER SAHPNRYPAPSEPLKTVPQLKPFIITRDAQQKQVFGVGYPGIPAMSVDEWYHQKFGCN PHNAPQSSAPEPQQQMESEEEDDDEARAKAMRWDEYKDDHRRGWGNTQNKG" CDS join(330627..330719,330763..330966,331018..331626, 331674..331784) /gene="CBG09828" /locus_tag="CBG_09828" /standard_name="CBG09828" /product="Protein CBG09828" /note="contains similarity to Pfam domain PF10258 PHAX RNA-binding domain contains similarity to Interpro domain IPR019385 (Phosphorylated adapter RNA export protein, RNA-binding domain)" /note="Predicted" /db_xref="GOA:A8X9R2" /db_xref="InterPro:IPR019385" /db_xref="InterPro:IPR038092" /db_xref="InterPro:IPR039047" /db_xref="UniProtKB/TrEMBL:A8X9R2" /protein_id="CAP29377.1" /translation="MAFRKRRRDSDGDSDEDRLPIAKDVDDDLKSEPAKKAKNIWSDM LLEDQLLEKGSKINLDRSSRHQPNVSRGPESYIMPQDEFQRKQANKGKEKRPHYDKPV VLVTPASDDLFGDAPSALDEEFGVKKSEKKLVTEEEESGWWGKKGANKRYHDKMAQDR PPRPAHQQKKTAQLMAEEFTLETMLAAQFDKGSTLDELGNQVAAAMGEKDPDTVKKIV NAIGRELALKLFNDTKEVEQNGGMKVADGSRRRTPGGVFITLFKMEPSVSRETKNNIF DNMRNADKHRSKQKKKAQNYSRQLEDVKKTMDLVAQAESDLATEELGTSNDVPFNDDV VDMC" CDS join(332460..332509,332611..332719,333083..333212, 333276..333418) /gene="CBG09829" /locus_tag="CBG_09829" /standard_name="CBG09829" /product="Protein CBG09829" /note="contains similarity to Pfam domain PF00887 Acyl CoA binding protein contains similarity to Interpro domain IPR000582 (Acyl-CoA-binding protein, ACBP)" /note="Predicted" /db_xref="GOA:A8X9R3" /db_xref="InterPro:IPR000582" /db_xref="InterPro:IPR014352" /db_xref="InterPro:IPR019748" /db_xref="InterPro:IPR035984" /db_xref="UniProtKB/TrEMBL:A8X9R3" /protein_id="CAP29378.1" /translation="MDYDSKKLEEARKQTIRWETWKREEVEARQRGLEFKMYWEKRHK EDRDAWRLKDFANAIDKMSRAGYKGKHGDFEVPPERLEELNALYMQATVGDYDGNTAL KCSQYWKKHSGKTQIEAIREYIKLTNKVLTKYGWNPPEGWV" CDS join(337277..337471,338868..338936,338983..339100, 339260..339525,339574..339979,340027..340077, 340354..340461,340518..340718,341347..341402) /gene="CBG09830" /locus_tag="CBG_09830" /standard_name="CBG09830" /product="Protein CBG09830" /note="contains similarity to Pfam domains PF01471 (Putative peptidoglycan binding domain) , PF00413 (Matrixin) contains similarity to Interpro domains IPR021190 (Peptidase M10A, matrix metallopeptidase), IPR006026 (Peptidase, metallopeptidase), IPR001818 (Peptidase M10, metallopeptidase), IPR002477 (Peptidoglycan binding-like)" /note="Predicted" /db_xref="GOA:A8X9R4" /db_xref="InterPro:IPR001818" /db_xref="InterPro:IPR006026" /db_xref="InterPro:IPR021190" /db_xref="InterPro:IPR024079" /db_xref="InterPro:IPR033739" /db_xref="InterPro:IPR036365" /db_xref="UniProtKB/TrEMBL:A8X9R4" /protein_id="CAP29379.1" /translation="MTKWSPNGYPLTIAIPTLPHIYLMLSLFSLAHTAPHRTELRTTS SRASSSEDTSFDSDEAFQFVKGQMEKYGYLTDQKEFKDALKVFQEVLEVEQTGVVDEA TMEAASKPRCTQKDIANTPKRSRRFTLSKRSKWGEDRFTGPSTITLKWYISEYTNDID RMETRRVVKKAFELWSSQSYIKHEKKVALNFVEAASKEDSDINILWAEGSHGDEYPFD GANGKIEGNKKENVLAHTFFPGYAFPLNGDIHFDDAETWEVDVDEVGGAGNRKRFFPY VLAHEIGHALGLDHSQKSDALMHPYYKNVPIHEIQLDVDDKCGVIWNYGGSSNFCLYV WLMSQIIEAHNSSAQNSPAVGSITSSRNGKKLLKNAKIPKCSITNSSLRTNTEKKLTF GLQLSESDAKHYTDIVCNFLAGLHVWRAGSAHNPNESLEKEYKGVVQEMSGFGGRSSI SVRRLIRHAEHEKQESRKGPLDPEYFDDDFFEQFFMNYT" CDS join(343770..344040,344092..344460,344510..345058, 345109..345215) /gene="Cbr-ssq-2" /locus_tag="CBG_09831" /standard_name="CBG09831" /product="Protein CBR-SSQ-2" /note="C. briggsae CBR-SSQ-2 protein ;" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9R5" /protein_id="CAP29380.1" /translation="MTSAYFGVAGGGNAGAQSAYFGVGGGPAGGGGAPKMGGGGGAPP PGTSCYLGAGGAGGGGGGGAQSAYFSVTPTGAGAAPVGGGAAFAPPPAAGGGASTMTA LGGAPSGASTMTAVGGAPRGASTMTAVGGAPTGASTMTAVGGAPTGASTMTAVGGAPS GASTMTAVGGVPSGASPMTAVGGAPSGASTMTAIGGAPRGASTMTAVGGAPMGGTSTM TAIGGAPSGASTMTAVGGTPSGASTMTAVGGAPSGASTMTAVGGAPRGASTMTAVGGA PMGGGASTMTAVGGAPSGASTMTAVGGAPRGASTMTAVGGAPAGGPSTMTAVGVAAGG GGASALGAAPAGSMGGGGGGGATSGYFGVGQGVMGGGGAAGQSAYFGVGGGPAGGGGG AKTGGGGGGIPGQSVYMGAGGAGGGGGGGGATSAYFAPK" CDS complement(join(347759..347829,347882..347983, 348130..348240,348337..348747,348895..348991, 349037..349149,349225..349725,349922..350070, 350313..350493,350577..350717,351429..351942, 351994..360212,360259..360552,360904..361023, 361136..361208,361265..361473,361523..361849, 361904..361976,362023..362170,362217..362319, 362375..362437,362593..363403,363451..363839, 363888..364142,364189..364257,365025..365115)) /gene="Cbr-let-805" /locus_tag="CBG_09834" /standard_name="CBG09834" /product="Protein CBR-LET-805" /note="C. briggsae CBR-LET-805 protein; contains similarity to Pfam domain PF00041 Fibronectin type III domain contains similarity to Interpro domain IPR003961 (Fibronectin, type III)" /note="Predicted" /db_xref="GOA:A8X9R7" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR036116" /db_xref="UniProtKB/TrEMBL:A8X9R7" /protein_id="CAP29382.2" /translation="MGLRSRGLLLLSLGIWYLQLFTVASVALNSNVRVKRQSGTDSLL TVEWEGIQTGDHADSEVKGFLVEYRPERSGEWQLHPGIIPYKGPNHQYRVQIPKLPTG ISYLVRIKVIGENNEVLVETPEIRAHNEIVSIKCENDDLTAPRYPVVTEVAQYSLAIK WDVPDCGVVGDYQVELTGVSAPFDVHRQTVTQPHVSVTNLLPGTFYSVKVRAVDRSRN VGPWNSEVLEAKTKGDALPISNAIQLLYRTDSELRVSWQPFMDPRLQHYEVTAVEVDE DSRRVERRRVEPALSSFALTGLRPSTKYTIGVIAFVDHEPKQVYQIEAYTTSGGIESW EEKPQVVDQGKQQFAVHWKLPATSITVSKFILEYRLPNETTWRTSEQKGVAEGSGDYS VALSQMTAPYYTVRIVAIDDQNKVVARTEELTVGEAAESSCVGSAGVPTNIRSTDVDS ESIKLEWDVPQCDETHTPIDGYEYIVYEASQNAPAKGASYVGAPHVIIRGLRQNVDYT FKVRSRSVNGHSQWSKDVIIETAIAGSVSSGELGELNQLLRVKRQAKHLIKDPLNIFK LRIVLSPPCSYLVWTPLTLHSQIISKFKLMYKEVSSNKWIKLVGGPDHFECPRGIADP EDYCYQLKGLFFGVHYISSISYQLTNGEELPSSNPLHFTLVQLDGSASSNTQGVTITQ PRIEQSASRSVAYWSVIGDRSTVAEYQVDIRTTDERSWRAVEPSVENEQSQTHYRLPL GQLNVASTYLVRVRALDSSRSTVATSPSASFSVLCQVPSAPENVRLERVSDQTVRVSW ESSQESGDCQSYFFITGKQNGQSINQRVPGSDRSVDISGSSQGDWRVQVRGVNTAGSG TPSRDAIFSSTAQQSTRQKRSVCDPRTDFWCQGQFSNSPLRATDSGEGAVNRVWSLVS TPRVLAQDNDLIVKWKSEGEGRGVYGYHVQFRSENSGWKTYGQLVPYVGDNMEYTQTL TGLERGNAYFIHVQVLDRNSYVMYTSAQSSAKSSCSPPTHTPSHLQVAAPDASHVRVS WALPPQSTWGCSDIQFEIQPEEPRGQPAVVLGSHQTSHIFNSAPNQMWSVKIRAINSA GHSAWTPASQAKTPPGGELIIGPDVNYRQGKPIISWRSKEHTNDLIESFVLEWKATTE QNWRQHRNPIPYNGWQRPYSVDLGELPQGHTYQVRIVAKDPNRGNAYTSSVVQVQTQS QCKAPRRAPADVQVSPLGPTQIRVQWAPLHESEWNCDRLWYIVKYSTPQNQGFKNLTN GENFVVFDSDPYTQWNFEVQAANPAGESQFSRAQSAQTQGVAPGAVANLRVQPIGPDS LQCSWQPPMNPNGRITQYEVTYQLISRGNCDNNQEAPRTITVNGSHFTITGLHPHSKY RVGVAAKSDVGAGERVSLEIQTDQAAPGGAPLYLRTEEIRPTDVSISWQAPPCLQTNG EITEYEYEVTAGDRRQTVQKTTENIRGTRARIENLQPQTRYNVKVRAYTARGPGPWST EVPFQTSAGQQNVQAPGFVKVLHTGANNAQLVWQSPYPNPGYVDKYKCRYAPTGTQQF QERQFPAVSPCQQRQIERQNLPQSPPGARLHCGRIENLKPEQTYDFQVSAHVKDSGWG PYSPPERTKVTDSAVQVLYVRKIGGSENSLHINWDVRPDDKNRVTAFKIVVVPQDGSQ RAQTFNVDRATYQYRIDNLRPRTTYNVTVSAATHKEMCGGTAAVMTTDAAALTALSMA PRVIAEEPTSITIEWESRNREAGGFIVEYRLEGGAWQQYNRRIPAHPSQTTYTATVDG LPTNAVVDLRVRVVSQQNEQSNPSPEVRARTKCSPPTSPPQGVRVDAPSTNEVRVSWA RPAKNTWMCDQMNVEISYRVGNQPEKILTVPGDQTEYTFPAEPNQRWVVKLRATNQVG SSQWSPEQSITTRQGAPGSVRDLRVKALSPNEVHVQWLAPLVQRGTIVGYDISYRLKH RLACPEEEPRDVSRDFVTVYNHKDLDYTITGLLPYSLYEVRVRARTTELGPEETKEVS TEQQPPSSPPLNLESTYALERSLSFQWEPVDCSQRHGHIVNYEYEILGQDDWAKLERQ IANTSDLRVTIDGLTPYTKYVMRVKAYNSIGGGPNTENLVVMTAKAQAPLPPQDLVVA QEGTDFFMVSWLPPYPPYGPHDAYKIRYQQIPSENWIENEKGVKDPLLKCPGESPRFC YNATGLESGQQFKVQVATRIEGGSYGPWSSLVIANTLQVLPDAPRAIHLIEKTDHSLH IRWIPPVDPKGYVTQYRVSIVSLDDVNDKKRTQVVNHPTLTHLFEDLNPETSYNISIS AGTKQGFGREIWTRYTTDPFNIPVVGTMPTVTPDGANALDVQWNAVLDPKNRVKGYII EIRNSDTPVWQEIGGVTNHDSVKSTYFKKLTGLDSDTLYFVRIKVVDHRQRVGVPSPE AQARTGCAAPLSPPTNLNLASPSNVQVRVSWQAPNQNSWKCSAIRYKLEYINGTQPRK QIDLPSSSIEHLFDSKSNTKWIVRIRTENDAGSSEWSKELEITTAEGAPGAVEDLTAK PKGPTSVVVRWKPPRDPNGVITGYTLTYKLKSIGECGPRSAAPIEKHVRNEEQTLEGL LPDSTYEIHVVAHTSHAGPQSSVVTVTTEEAAPTGPPQNVRVGSITSSRADVTWAQPE CEQRNGKITDYEYELWSMDTWADNSTGHNPTERLNLDQLIPYTQYQIRVRAINKEGEG PFGEWVPFTTQSTNPPAPTDLQEEATFPHAIEISWLPPTPPHGNVDFYKVRYTPTGEA NYREIRVETDRLECSDSNKKDRLCYRLSDLDPEQEYDIQVSAHTEGGGWSEWSDELTS RTQQQNIPVLERELEVTDKTSNSISLKWEGLPQDQATHVVGYVLEFKSEDDNAEWQEY NGVVKHRKSTQDYKITVKQLETATLYFFRLRVVGKNDKRGQPGPETKETTSCGKPEVP PEGLKLESLDFETLKITWTPPDESTWRCDNVEYLIDFVNTTSRGNWTVSTDAPSELIV PTQPGTKWDVKIRTQTVEDMGKPQFSKWSDKVSITTQSLPGEIFVTVEPKGPREALVT WELPDKDQKWNYGVDITYKLKQLGGCNEVQTGAKEPVTLLNVQEKQIPLENLQPGSLY EVTVTPRRPPSLHSSIVTPKTVRTFRTKNDVPTGPPQNLQSTVRKDSELGFKWDAPEC VQQNGNITQYEFELVGLDEWNEGTREGVTPRQNTLIDQLQPGSLYRIKVRAYTAEGPG PWSDSLEIRTTGSELGPPRELTAVQTKATQIQLTWLPPYPEKAIVTAYRIRYSPRADD SNPTEVELSGDELTCSGYKSPIITSANLCATIKGLQPSTTYRFAVQGQSSSGNWGEWS SDYFSTTRNDDNELLGGSLKLLSAGHDNLKVKWTPPAVIGEKIDKYDLFISVASVLDQ NPKKFDVSGHTTDYHFRNLDSVTQYNVTVQGTSEGNKLWFISSVFSTTDFAEGLLSWL PAPTDLHLIEKSDTMLHVDWVPPEIFDPEQRELITHHRVTIAPFDPTTGKTGPSKNYT VPYPGNSIKFEGLRPETIYNITVQAGTNSGYGHILWGTYSTLAPGQRHILRLLNRTPT TLNVAWEPVWGRAHSGYTLTARTLYSVYGNVRLQQIKSFDVDASQTEFVIRGLHPSTV YNVTLTPKDHNEVAWGAYATLPPGWFVVKNLKQCDKTDFAVSMSWEPVELDMASDYQV RYLRVKEHDGIWTEEEARPAKELLCPKDGCGRLCYLVFNLPHNPSEYVFQVRAKVDGE WNHWKSAPKKMTSSEPLNVIVNLKISPNMNLFQIRRSCCIVPPPYFVDNIGAPGTFWE VDVNPAATENNVTRYYVVVDERDPPGDTNWTELTDKVTANKMKIPYYVAASFNLETLP EPRKVRIGDGSVIGGYLNYPLVKGKKYNYEVYTIWNVTGAPLVGRLRDVRGWDWLFNQ IYFLWIFLPIICLLVLCCLIWMVYKYCKELVGRAWRSSPYITSSWPWWWLLLPLLAAL LLTLLCCCIPWCLQRLILFPPFQTNLLYFRISFYVLKVPRHRSRKEHSRLVTNGQHAP LLEEQKAGMNENMRQLESRLDKMRGAVDGRARGDFEDGYMKGYKDANKLGSANAARRR LDDEYGARDDRFHEGYVKGLKDAGMTGMTTSMHNLAQRTGGGYSAGFAQGYKDGNSGI FGDRVTPSLVSRLDEQYAGQEDFKQGYVDGFKEGASSRVGDRSRFEDSRRLQQSLTEL TERLTSLEKTKGDEIHSTKIYHVYNQQPEGATMTSTGAQLAQELEEIGSTSRRSTLRR HYTPGDYLKQDAEEGYNSLSRNRRSLSASALAANREAAHQSSSYLQTGGTLSRSRHHM SHAGSSYLSRAAQDAQIGTDTYAKRYNYRSRSDVGSPRRYASQTLLDGSRPGPSTPYA RRDALHTLTKELDSLSRSPDVRGATPRGTTSAGYGSDTNAYDTVRSRARGYSNYDYDT FQSSRNVTQTQATSGATQTSGATAAGAASSSSATQQDKSGKWAEQLIDLVSEPLDTTI ARINNYTSSSNDRGQGDVVEEKYYRSHKEEHSSR" CDS complement(join(376697..376750,376799..376912, 376959..377029,377089..377204,380724..380791, 381530..381633,382019..382082)) /gene="Cbr-pbo-1" /locus_tag="CBG_09836" /standard_name="CBG09836" /product="Protein CBR-PBO-1" /note="C. briggsae CBR-PBO-1 protein; contains similarity to Pfam domain PF00036 EF hand contains similarity to Interpro domains IPR002048 (Calcium-binding EF-hand), IPR018248 (EF-hand), IPR018247 (EF-Hand 1, calcium-binding site)" /note="Predicted" /db_xref="GOA:A8X9R8" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR018247" /db_xref="UniProtKB/TrEMBL:A8X9R8" /protein_id="CAP29383.1" /translation="MGQTTSQIPEHELEHLSIESGLSRGGILKLYSRFISLATHRDKT TNEYFLTKGDFQSIAELKQNPLGDRIIDAFFADAEVLERRKVYFKDFVKVLSHFRPIN KNKPHPWNSREAKLRFAFTMYDLNKSGTITKDEFQDILEMMIGANVPKEQVNSIADRT MREADRDGDGYITFQEFCNAMEKTDIEQKMSFRFLT" CDS join(382365..382415,383661..383770,383827..383926) /gene="CBG25880" /locus_tag="CBG_25880" /standard_name="CBG25880" /product="Protein CBG25880" /note="Predicted" /db_xref="GOA:B6IHN5" /db_xref="UniProtKB/TrEMBL:B6IHN5" /protein_id="CAR99391.1" /translation="MPRNCYPLCAEKRDFMEHNPAQNGTDFYREYDPMVGIGTAAVLA LFFFTITINGCIRCAVRKYKMHKFYKEIRKAEDNQKPICDTV" CDS complement(join(384345..384503,384554..384686, 385165..385234,385281..385392,385434..385558, 385603..385747,385854..386034,386073..386162, 386205..386412,386456..386495)) /gene="CBG09837" /locus_tag="CBG_09837" /standard_name="CBG09837" /product="Protein CBG09837" /note="contains similarity to Pfam domain PF01545 Cation efflux family contains similarity to Interpro domain IPR002524 (Cation efflux protein)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X9R9" /db_xref="InterPro:IPR002524" /db_xref="InterPro:IPR027469" /db_xref="InterPro:IPR040177" /db_xref="UniProtKB/TrEMBL:A8X9R9" /protein_id="CAP29384.2" /translation="MIPMSLVVSNVNTVFRRKNPTIMFAMVRCLSSDPPSTTSQDGIP ISKRKMKKLFKVAQLSKKSRSYENDKIDKLSAMAEFGLKESDLEDLPSHSKPTISHSH HQNMNKNSHQLSWKFGTLEAHRRPLVAMRKELTDAERMRMRMRVETTNQHKGADRVVA IAFTLNLCDMAMKFTAAYLTGSKSLFAEAIHSAMDTCNQLILLLGIRYSAKNPDLLFP YGYGNMRYVTSLISGCGIMAFGCGLSMYHGISGLLHPEPLEPLTYAYYALFMSLCFQG ASAITAYREVFAKARKAKISLWNYVRTSADPSLNVVLLEDTAAVTGGRSVHDVKATCL GVEQSRFKAELDFDGRMITRAYLQEAVHLPALLNEVKQIENEDELVVFMENHGEKVID RLGDEIDRIEGEITKKHPDIRHVDLEAL" CDS join(387732..387777,387826..387982,388030..388096, 388192..388734,388780..389130,389179..389466) /gene="Cbr-set-27" /locus_tag="CBG_09838" /standard_name="CBG09838" /product="Protein CBR-SET-27" /note="C. briggsae CBR-SET-27 protein ;" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X9S0" /db_xref="InterPro:IPR036464" /db_xref="UniProtKB/TrEMBL:A8X9S0" /protein_id="CAP29385.1" /translation="MAPTPDGELEDQILGKIATLFEQTLSRPPPSSIVDLWKEHSAIR RILDEVSSLQARVSDTDKRLSDSVRDAEVIKKFMAWADGVEVARNNNDSKWSHRCPCS RHAMMTLDLAKKSSLLKKAFERDPIVSGMDNVGLALFLAVHWLQNEKSKWHSYISILP NSFPTPLFYTEEQLLQLKPSPIFEEALTFYRTIARQFCYFLLAVAKNKIYESAQRRKD ARNTMDVPIFYNAPFTVYNFTPRLYFWSVGTVTTRVNMVPSENGSGDDGKAIMIPALI PLLDMANHESVVTDPVDDLVCYAPADECAVITSHCDLEAGKEVTIFYGCRSKGEHLIH NGFIPINHQKQDFFKLKIGIPKSDKTLEAKKKLIEKYVQNVYCTGNIFHVDLYNYPEQ PFPLDLLMFAAIFVCPEATDAAITKPEIRKKGLEFLKTRFSLLKRSYEASFDALKLTQ VGIDGDAARLKAGESEILQMALTYCEKLEKQNI" CDS complement(join(389649..389831,389877..390010, 390034..390179,390225..390381,390431..390948, 390969..391636,391687..391879,391927..392061, 392103..392213,392262..392641,393083..393223, 393270..393404,393447..393550,393834..393843)) /gene="CBG09839" /locus_tag="CBG_09839" /standard_name="CBG09839" /product="Protein CBG09839" /note="Predicted" /db_xref="GOA:A8X9S1" /db_xref="InterPro:IPR026307" /db_xref="InterPro:IPR031437" /db_xref="UniProtKB/TrEMBL:A8X9S1" /protein_id="CAP29386.2" /translation="MLFYSKVFADHITFSPPDEAFVLYHSHQNTNFTSVFVQDGCPNS RNLMATVYSSDLPSSRRVFEEVPLHCAVKVRIITEKVVIVRPYVDFLAVVDESLSRHV GGICVHAQITSSTSATGEFCVKTTRTNFSTDKLLIIKSPIFDQLTSFFISLTGTEIIE LKVEWPSIRGNTVKIVSELGKCYLNRHDDQRTSCVIRIPVPFSWFPIDQNKTSILSVS YTVSEKCDQNFHDLPQHLIEINSKMAKQKVDWLANATDTSVTLRSTASQAFSQKSMQT LFLHVKSWANETQPMEIRLWVDSRMSIETVYPTNSDWTIRVSSASRPFFYTSLICTPK EGMAEFNDNIVAILIKMVSSTYAIKDDVVLHWHVIFGPKSPDPPPDDHKVATKFNVIA DEVAAVVIVPKRKELINLAVISGLQVTSSLRIFTVSIGARAEDVTSQSHCISSDANII KVSPTCSSVYLDGSESNGSSDAQVYAHFLRYTTVFSFRVWYPKLPLKIWTSTSSLSTI KNWKVGFWRDLPLGGGIKRSRAARQFACVNRFQNGHVCILQIYSKLLNKYFQVKVLAS LWIEDQKTGDQLYLSSHKSILLDVTNIVHNTLQISNRTVANVKFHEGRAVMIGENVGL ANAFSKYEISRLIVRNAKKSLDLVTENVSVRNEEVTTTGLSARPICDTNFRILPILFS PAFFKIEITHSKALTKLYQQCLIFASVSYSDGTWEPLNDLDASYFEMSAHSDNERALV VSHHASKVHVLAIDEHWRLPSVEIALQSSAQCASTINGASPASLAVTILNVPITINTS VPSINDLDASSSTPEPPETLPSVPMHVFLLTILGLVILFILISCVRRSAAFKGYEQLV VPFFSRLSSSSGSHSRQEETNEWVWLSQPQAPSSTISKSSKQKSSGYSGNKSTAERQS SNGDDPSRTSISYHGSEISVFIAPSQANVVVNQSSRHPRYTLVDSNSDHNLARIGPKE ERWTTGGHDQFHTWTWKQRDGRMEAPIRESIA" CDS complement(join(394385..394593,394644..395146, 395195..395269,395317..395621,395699..395766, 395897..396002,396143..396266,396311..396336)) /gene="CBG09840" /locus_tag="CBG_09840" /standard_name="CBG09840" /product="Protein CBG09840" /note="contains similarity to Pfam domains PF01546 (Peptidase family M20/M25/M40) , PF07687 (Peptidase dimerisation domain) contains similarity to Interpro domains IPR017153 (Glutathione degradosome, DUG1), IPR011650 (Peptidase M20, dimerisation), IPR002933 (Peptidase M20), IPR001261 (ArgE/DapE/ACY1/CPG2/YscS, conserved site)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X9S2" /db_xref="InterPro:IPR001261" /db_xref="InterPro:IPR002933" /db_xref="InterPro:IPR011650" /db_xref="InterPro:IPR017153" /db_xref="UniProtKB/TrEMBL:A8X9S2" /protein_id="CAP29387.1" /translation="MEHIDAVFKSIDEHQEEFIDLLRESVAIRSVSADPARRGDCIHM SEWARDQLRTLGVETSLWDLGKQKLSSGEELPLPPAVFGVYGRDKSKKTLLIYGHLDV QPAEKEDGWNTDPFELTEIDGKLFGRGSTDDKGPVIAWIAVLKVLKKLGIELPINIKF VLECMEESSSEGLDKGLEDNIDKISDVTYSCISDNYWLGRNKPCLTYGLRGICYYFVE ISCARQDLHSGINGGSVPEALNDLMWIMSQLVTVDGQILIPGIAELVAPLTKEEDDLY DKIDFCVDTFKKETGSHGLIADNKKNLLMNRWRYPSLSLHGVEGAFSQPGAKTVIPAK VTGKFSLRIVPHMTPEATDKLVTSYLDSLWAKRKSPNTFKVTSGHGGMPWVADFRDSN FSAGSRAIERVYGMTPDFTREGGSIPVTLTIQELTKSPVMLLPIGASDDMAHSQNEKI NRENFVKGMKVLAAYLFELAA" CDS join(397604..397617,398021..398078,398495..398651, 398700..398832,398878..399049,399100..399209, 399254..399470) /gene="CBG09841" /locus_tag="CBG_09841" /standard_name="CBG09841" /product="Protein CBG09841" /note="Predicted" /db_xref="GOA:A8X9S3" /db_xref="InterPro:IPR039890" /db_xref="UniProtKB/TrEMBL:A8X9S3" /protein_id="CAP29388.2" /translation="MSNSRSQPRNSSPPGTLASASRNKRFFQTLHNPNIKQNERESNP LVSREPDFFSPEGACHKIYWSDCIAQMAMDILERQKAVTACEFDFLKPKLVEYTFTVC VRLRLPNEVRFTAALILNMYLTRQLCGLHEFIGQQAFDVQKKNREWDRMETNMERQIP LRILTAIQISTKIHSYHDSLSSRQVVNTLRVVGVPYNMSAVMESEQRVFKLIGHSIPD SPLEACEMALKVLTYTLNKRGMEEASRHDDLWQHCLIVLDVCFINHIELYDRFIRKCP FILKEGDEKR" CDS complement(join(399822..399877,399997..400148, 400355..400458,400888..401000,401048..401096)) /gene="CBG25881" /locus_tag="CBG_25881" /standard_name="CBG25881" /product="Protein CBG25881" /note="contains similarity to Pfam domains PF00071 (Ras family) , PF04670 (Gtr1/RagA G protein conserved region) , PF08477 (Miro-like protein) contains similarity to Interpro domains IPR013684 (Mitochondrial Rho-like), IPR003578 (Small GTPase superfamily, Rho type), IPR005225 (Small GTP-binding protein domain), IPR001806 (Small GTPase superfamily), IPR003579 (Small GTPase superfamily, Rab type), IPR006762 (Gtr1/RagA G protein), IPR020849 (Small GTPase superfamily, Ras type), IPR002078 (RNA polymerase sigma factor 54, interaction)" /note="Predicted" /db_xref="GOA:B6IHN6" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:B6IHN6" /protein_id="CAR99392.1" /translation="MDTIKTVKVVVVGESGAGKTALLTSFLENHFETDPLTTIGIDFK HKIVQLNDGQSIRLQLWDTAGQERFRQLTPAYIRSSKVALLVLDLKRPPRLTNIIKET KDDYIETSAKTRKNIKELFSMVACRPFPEHKTSQIILLNEPRPSESETRRCCQSS" CDS complement(join(401314..401500,401781..401910, 401955..402281,402328..402484,402611..402795, 402845..403244,403291..403383,403427..403597)) /gene="CBG09842" /locus_tag="CBG_09842" /standard_name="CBG09842" /product="Protein CBG09842" /note="contains similarity to Pfam domains PF07859 (alpha/beta hydrolase fold) , PF00135 (Carboxylesterase family) contains similarity to Interpro domains IPR013094 (Alpha/beta hydrolase fold-3), IPR002018 (Carboxylesterase, type B)" /note="Predicted" /db_xref="InterPro:IPR002018" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8X9S4" /protein_id="CAP29389.1" /translation="MGGTISKNSQHYPDSRQIVTSYGPIEGRRLIHEGEKQVDAFQGI PYAAPPVGKLRFAMPQPHEPWTEVRHCKAFGARGIQKDSMLSGKVAPQSEDNLTLNIF TPVWTPKNSTGFPVLFYIHGGGFISDSAHKYGDLSICQHLCTKDVVVVTIQYRLGYLG FWTTGDSSIPDNLALHDMTFALKWVNENIGLFNGDPNNITLMGQSAGGASVDLLSISP VSRDLFHKVIPMGGNASCSWAIHPRPLHSCRNRAQEMGVLDGMNTLDWVEKLREVPAE KFGASLDMGAVDLKSDPELTIGPKYDNLFIPKPLMELRKESPVKPRLVGCARSEGLVL CMFGMNPKHPLHVLHQDVASILSEKFFPLKARDYQEKALEKLIDVGSDHSKEEWQRAM CELKGDSFLNIGIQQNVLDVLETQPLTPIYMYSFDYCNQKAYGIMGWKMPFKDATHCT DISYVVGNHIVMPLDFNEEDYKMIDITTRLWTNFAKYGDPNGEGDDAAELEHKWEPAT IENPQVHMSLSLQPKLLPIYKQERPLYMAKLLKEARPPVNL" CDS join(408418..408539,408591..408666,408710..409207) /gene="CBG09843" /locus_tag="CBG_09843" /standard_name="CBG09843" /product="Protein CBG09843" /note="Predicted" /db_xref="GOA:A8X9S5" /db_xref="UniProtKB/TrEMBL:A8X9S5" /protein_id="CAP29390.1" /translation="MEQINLSFLNNSSEYPNQSKTTPSNCPSMIPVYCAYQVFTISLL VVTVLVGCKSKAKPKGKPAVKPASASKKSKMSEPNPVASTSSVKQAEKEAEPAKEKEK TKQSEVKEPDAPKKENDREAENKNKEKEKEKQEDTFDAIQPKKQDADRKKELGDKKKA ENKGDYKTWNKIIENSEFNKSLSENDKKDKKKKKEEGTDEKKDEKKEDSDDKKDEKKD EDDKKKTDEEEKK" CDS complement(join(409424..409487,409671..409723)) /gene="CBG25882" /locus_tag="CBG_25882" /standard_name="CBG25882" /product="Protein CBG25882" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHN7" /protein_id="CAR99393.1" /translation="MFVEEHACSQVAKLYKVDEAHNVLSSHSHHGNETTLEI" CDS join(410825..410841,410891..411085,411134..411451, 411501..411621,411700..411861) /gene="CBG09844" /locus_tag="CBG_09844" /standard_name="CBG09844" /product="Protein CBG09844" /note="contains similarity to Interpro domain IPR001666 (Phosphatidylinositol transfer protein)" /note="Predicted" /db_xref="GOA:A8X9S6" /db_xref="InterPro:IPR001666" /db_xref="InterPro:IPR023393" /db_xref="UniProtKB/TrEMBL:A8X9S6" /protein_id="CAP29391.1" /translation="MIIKEYRVVLPLSVEEYQVGQLWSVAEASKAETGGGEGVEVLKN EPFDNVPLLNGQFTKGQYTHKIYHLQSKVPALLRKIAPKGSLAIHEEAWNAYPYCKTV ITNPDYMKENFYVKIETIHLPDNGTTENAHGLKGEELAKREIVNVNIANDHEFLNSGD LHPDTTPSKFQSTKTGRGPLSGNWKDNVQPVMCAYKLVTVYFKWFGFQKIVEGYAHTQ YPRLFSKFHREVFCWIDKWHGLTMMDIREIEAKAQKELEEQRKSGQVRGMNG" CDS join(412550..412653,412705..412801,412851..412940, 412984..413085,413132..413239,413294..413354, 413398..413503,413553..413778) /gene="CBG09845" /locus_tag="CBG_09845" /standard_name="CBG09845" /product="Protein CBG09845" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9S7" /protein_id="CAP29392.2" /translation="MLLRRVVNSVVQVRAISDQMTPEKYERIFSVYSLWKRYNFRYGF AENPDHKQVRITRSDRNIEFYHRLSLMEGCPRVVLDRPEGTIRKLKENVKGYMRNAFV RGLGLQEDKEDFLALCNSAFFEVLRAVREEDFSKLAEVTLGGNETLQFHRSAAYKLNK LQKESLDITEDDLLGDNGHIIRLPFLKEEMGPYIHSMDFTNVDAVGKTHSKSGENQGD KVFCRYKIIMGGVYKFDALRKDLRKENIWENKIVTPKDYVFKSPRYTLVELDICQEAH NQMPIKLDSNRDLYDFHVYSF" CDS complement(join(414130..414225,414271..414434, 414482..414559,414605..414700,414746..414886, 415147..415150)) /gene="Cbr-nhr-239" /locus_tag="CBG_09846" /standard_name="CBG09846" /product="Protein CBR-NHR-239" /note="C. briggsae CBR-NHR-239 protein; contains similarity to Pfam domain PF00105 Zinc finger, C4 type (two domains) contains similarity to Interpro domain IPR001628 (Zinc finger, nuclear hormone receptor-type)" /note="Predicted" /db_xref="GOA:A8X9S8" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR013088" /db_xref="UniProtKB/TrEMBL:A8X9S8" /protein_id="CAP29393.1" /translation="MGRKDTAAVVCEICGDKSYGRHYGVWACDGCSCFFKRSVRKNII YTCIAGNWRCVVDKGRRNWCPACRLAKCTKLNMNRLAVQNERGPRKLRCITIPRINNL NSFKYDMIFSKAVSLTGKCILLNFMISEQRREVVEENCQMIFALLLLLNGDQTTIRRF TTNENVPSGVSCDPEQLRLLVCIILSQSSEFQ" CDS complement(join(416782..416862,417282..417489, 417536..417985,418034..418219,418269..418537, 418618..418683,419072..419142,419188..419739, 420505..420640,424393..424498,424662..424708)) /gene="Cbr-feh-1" /locus_tag="CBG_09847" /standard_name="CBG09847" /product="Protein CBR-FEH-1" /note="C. briggsae CBR-FEH-1 protein; contains similarity to Pfam domains PF00397 (WW domain) , PF00640 (Phosphotyrosine interaction domain (PTB/PID)) (2)contains similarity to Interpro domains IPR003006 (Immunoglobulin/major histocompatibility complex, conserved site), IPR006020 (Phosphotyrosine interaction domain), IPR001202 (WW/Rsp5/WWP)" /note="Predicted" /db_xref="GOA:A8X9S9" /db_xref="InterPro:IPR001202" /db_xref="InterPro:IPR006020" /db_xref="InterPro:IPR011993" /db_xref="InterPro:IPR036020" /db_xref="InterPro:IPR039576" /db_xref="UniProtKB/TrEMBL:A8X9S9" /protein_id="CAP29394.2" /translation="MREGTPRVRIEVNKQRPTHFVSESEEQRLQRVHSRDSDTATMNF VTDDRMQEEHEEYSAFKEAYEEEESREYVIENGVKRLVNQHYDSRGYSSSGRGQKGRR EEERRRNMAVDYSCMFPKKKKNKETCPRFFFFWSIHTRFDCITNSVLFAAQDFRQSLA AIDQASRDGAISRGEDGVRVRQIGDTTIMTEHRDPYSFYWQLDQQRREAESPPRRAPP TDYVIDEEEEVLDTVLSPETDDSGVMFENQYRRPVRHPLPPPPPPIMEEEPKDLPPGW EKHQDPQGYSYYWHVDSGTIQRQPPPPVRDVTPARSPTPPPPPVYSVTTASRETQADA PPPQIIQLPPQQPVIEEHAFKQTTTKRRIEQDEMSEGYAEENQIENGDTYHKPVRFAV RSMGWIEISEDELTAEKSSRAVNRCIIDLTNRTDIDNIPKWNDGRELIMELDDNELAL IDPDSMNVIHSERIQAIRVWGVGRDNGRDFAYVSRDRSTRRFMCHVFRCDTSAKTIAN TLRDICKRLMLHRRPSSLHAIESGEKRIVRSEGLSAPIDEPRKVLRCHFLGVTQVPKA TGIEILNEAVDRLVNQVRPERWIFADVSIAPSTIAIVEVNGGQIAECRVRYLSFLGIG KDVKHCAFIMQTSNESFMCYVFHVEPSAATMAKMIEAACKLRYQKVLDAHASSRHNSG MSSHGPPPPSSYHGKGWTETFRDAFGSVTSRMVPSRSTQRL" CDS complement(join(427305..427409,427453..427533, 427579..427633,427808..428088,428138..428275, 428709..429629,429675..430247,430292..430747, 430795..430938,430987..431564,431928..432091, 432139..432707,432757..432956,434053..434179, 435203..435313,435358..435468)) /gene="Cbr-ceh-44" /locus_tag="CBG_09849" /standard_name="CBG09849" /product="Protein CBR-CEH-44" /note="C. briggsae CBR-CEH-44 protein; contains similarity to Pfam domains PF00046 (Homeobox domain) , PF08172 (CASP C terminal) (2), PF02376 (CUT domain) (3)contains similarity to Interpro domains IPR012955 (CASP, C-terminal), IPR003350 (Homeodomain protein CUT), IPR017970 (Homeobox, conserved site), IPR001356 (Homeobox)" /note="Predicted" /db_xref="GOA:A8X9T1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR003350" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR010982" /db_xref="InterPro:IPR012955" /db_xref="InterPro:IPR017970" /db_xref="UniProtKB/TrEMBL:A8X9T1" /protein_id="CAP29396.2" /translation="MPYVCCVSLMCRILFIGARHMEAVTKAWDTVDWERLQARVEAEV AALGVRQDDSDARKERLVGESNAYKDRTNKENRKLAIPLIKAFQNEFEGLLARSSAAE SALIDICRSIINLPDPKSLLKSAEAWKSDAEKTQKAVEEREDLKRQLLKANNELEDFR GKDVKVRKLKDKLAKLESEQDTFIENAVSEVEKKAELELNSRLAELTEERDKMKEQHD ILEKNLNTIESKNKEMQRKLEIAKMTVEQKDGLENEQLSIAMKDLTDANHKIVFLEER ILQLETEAEKVNESKKAGNIEDIAALGSVLIQKDEAIQQLTNDVKRLESAHADDVAKW KSALSAMEKNNQALIAELNELKSTLDGRNDYEAIKNELRLLREIEFGAAAEANSESIE RLGETVETLDRLLAEKNRRLQNENASLRVKAETFKGDDVMKAIISGSHSRVVDTVGKR IGAEEATAYRQKNTDGELLAKVRVFLVGQNRNFAFQINEAKQRKMENDLKLEDPNIDV LTFLRKQKAKETFKEKTVAVTVIPTPTPTPPIAKQVTRLGTHTITTTALPPQSLLQRL TNSSALPKNDLRMDDDLKLSTVLNLKRFSSSVKPVEVKTAEELEAENETIEKMQKRIQ VNIQTLNGKALNTTEIASHCKRLMIAYNIGQRLFAKVVMNQVVKSQGSLSELLSKPRH WSKLTDKGREAFRRIYGWISDDEAIDLLCSLSPRRVWPADQTVEHPKAETLVDLTSPS SLDGTEESKSPQPQFTIIKVQTPQQAPPPAPVPEPVIEPVVNLKSSPEIMHLRTTRWK HDDISKEKILSILQTELKKIEEETTEKVVSPSKPPPPASNRRNSASIPYEATTLPGKT RPTAVELVLKQRVAAGLGPLTQAQYDKYSSLDTEQLVRTIKEFLTVNSISQRQFGEHV LGLSQGSVSDLLARPKTWTQLTQKGREPFIRMQLFMDDVEEAAEDDDDKQPKISVCEE DSDLAKTLATLLGTVTQEGENGSSVGEDVHREKTPDFETITEIPSSSERGKLVKYIDA STGEEILDSQKIVSRVKEVLEEHGISPRVFGDEYLNCSPTMCADLMIRTKPFQLSRPT EKVMYFRMRNFLNDPSSIPNLIKKEEEKDTVRDKFDFIVKETPKPVKRKASSDLEDYD PSKKAFQRTVITDYQKDVLRFVFVNELHPTNEMIEQIATKLEMSLRTVQNWFHNHRTR SKAREKEGKIYSDALPNGIAVRSDTWKDDLQKMLDEAPALMKQWAPDYYPRTGSSVKS STSVDSPTNNNNGAPIFPFDKPAPTSTVTATRKPNSGGQLDKALARMIRLAEGREAFI ILYISVRFEEQEAELVSFKEKSERNDRLIAQLESDLESAVQDMGITERRGTTDMLNDA NPTISDASLVPILTSQRNRLHERVTALEEAVSLEKTKQLSVQNEVERVREENIRLCER IRFLQAPNRQSLNSVESGLANESTNRNKRLSMHDNTTLHISRAILSTPRSRTVFFSYL LILHALIMLVLYKFAFDQSVVRDAETECEYKFHQHMMDNHKDG" CDS complement(join(435659..435783,435900..436018, 436635..436810,436856..436987)) /gene="CBG09850" /locus_tag="CBG_09850" /standard_name="CBG09850" /product="Protein CBG09850" /note="contains similarity to Interpro domain IPR016680 (NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8)" /note="Predicted" /db_xref="GOA:A8X9T2" /db_xref="InterPro:IPR016680" /db_xref="UniProtKB/TrEMBL:A8X9T2" /protein_id="CAP29397.1" /translation="MSLTKDTHLPSDEELTVPQEISLSTPWLKAVAPYMAKHCEKEAN EFMLRRKESEDPRAVLKEGAALTACGVNFLQSLKRSCLPQTQKLAECVDQGSAKLYMS KCHNDQKELDACVEANMNLTRPKLGYFSKLHVYDSATPAPEVKLRDYKAEAAKVLNEL PAEYHLRKDYRKYNDWRYNITES" CDS join(437438..437573,437623..437746,437797..437908, 437954..438163,438215..438516,438565..438688, 438738..438930,439979..440061,440108..440461, 440511..440910,440988..441475,441527..441618, 441662..441916,441963..442971,443020..443142, 443192..443359) /gene="Cbr-rbc-2" /locus_tag="CBG_09851" /standard_name="CBG09851" /product="Protein CBR-RBC-2" /note="C. briggsae CBR-RBC-2 protein; contains similarity to Pfam domain PF00400 WD domain, G-beta repeat contains similarity to Interpro domain IPR001680 (WD40 repeat)" /note="Predicted" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:A8X9T3" /protein_id="CAP29398.2" /translation="MTAEVAPAGTKSPALSVPVVIWGPKPPENRICTIRVLPDGSTII TGAENGHIVIWKLAEGLMPKQLMIGHSQKITAISQTSNSPTNTRFVSASADGRVCLWE IQDGRCIDSTSSVTIHRYIYPYTYKSSRHTRATRLFCIGDYSDIQVMDPQDLTVVFCI ASRVEPDWISCFTVITHPEKEDQLIGMTLSGMMKVWTLIELEKKDPSCSLYEDESKRL EIQHIRSVSYICSARRMLLIVASSSWMIIDMDDLSTVVLYKNKTTSKRCTSGYLTDLD KVTIGYTDESINVFQLPITSLQKEGVPPVTASNRPTSNYFDEPEPFVVATVNGVLENG RSCLNDVQYAFLPYESAEPSPSLAGEKRKFSVVRSSKRDGSVLVWNMPPFDHQFMKAV PALRNLPFKFNGTYRESLASIWQTINESEDGSMPVLNSDAVRCSLFVTSQGKLFLGRS DGVIIMTYACETLARQWLRVPSERATSRILTGHDAAVRTMFYPFEHDTKYDPQYFVSG SDDFSVILWNINSGTKIHRFTVHGGPVKSFMIPPPNCSKQVTKCIASIAADNTVALLN IRDSKCMLLASRHPFPIVQVKWRPLDDFMLVKLSDGSVYVWQMETANLDRIATGLLAE DIMAACDEQIGIEEGTDETSAHHAVQLIRALKNKNMEAVKQKVVGGTPSGSATPSSHH GLPTNCGTAVQLGSPMAIIPLPGCAQGAHLVQFEVSALISGILHLDSSAEAPEGKTTA QKLDAAVAANYDTSSVTGLSRKLTWQFEANLYLDVARLMLSMLHAWSLDEDMDEVCEK RLSLHRPRHQVYFGNVSRQGELSVSLPTRFATDFDSFCKKSRWQASHSLNTSHLLAVI ATSNTLMAMKNSALQLAKIRKSVVEMNSGHQNPDRQQVKQGWSLVAALHCVLLPDHVR PRSSYAPPSIEMLVRRWQDSCLEIREAAQALLIRELTRLGADGRRRLIESWTPFLPPL LDDSLSIFGSKLQSSVRTIQPSAPAPPIPPRTKNAPPDVTPVRGSEPPTAEGGEAGIQ QVRRNQATSIILLGVIGAEFGDELNRADLTRATAVSLLELLVAAPSNLIPVHSPLRRA AIDLLGRGFVHWEPHLEISKVVLGLLDLASTNDKQKYDFQRERILHVPKSLFFSTARR IIGAPLNAIEDASRTSRQALSLIALARPPALITSLSMEVARYNAAAQHQTIQHTVVSP LLKSRTEVLRIVEELCEKRYNDIITMLLPVGDILVHCLDITILKHKSMADVFPPIVKF NMVAYCSSTKRIAFGGKNGTCVVHELRATKTHSLPSHNGPIAAVAFSEDGKYLATYGA EDGKINFFQTSQSFLGMGQAQLKLAKSQPAPTVSVPTTPSGTSFRPRLVWINAKSLTL MLPEGREQRFSL" assembly_gap 439006..439829 /estimated_length=824 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(443620..443862,444028..444142, 449713..449912,449965..450068,450120..450159)) /gene="CBG09852" /locus_tag="CBG_09852" /standard_name="CBG09852" /product="Protein CBG09852" /note="Predicted" /db_xref="InterPro:IPR040271" /db_xref="UniProtKB/TrEMBL:A8X9T4" /protein_id="CAP29399.2" /translation="MRHLFGFFLLPVLVSSQLAAVYSEASRTSACSNWSSWGKCVWPD QKTGKPYLEQVSSICQHHWFYSFIKRYENSLNSFYSYMGSVLKSKKPCGLCSYKQSCG FGGAVKCNQSPLAVEGTRPFLPFYVAERVCSEKDLGKSQVDSCVVDYDALMVNSKILS RKIHSLKFPENFVKDEERIQSSAPKKYADVVVSHSVRIQKPSNVNMFLAVRLLLEWIF LPTNSIEKEREFERS" assembly_gap 444676..449134 /estimated_length=4459 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(451241..451612,451659..451697)) /gene="CBG09853" /locus_tag="CBG_09853" /standard_name="CBG09853" /product="Protein CBG09853" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9T5" /protein_id="CAP29400.1" /translation="MGSNEPVPTKSSPKVPSADVAQSQKIAVKEETKKDEAVESKAEG ESKEGDKKEGGGSGDAAKENSLKPFPKFEMPTESKKNKKLAENEKDKKEKMKNGFYQE KSDEDDTLEKVDSLHVEQSEKTKRSQKKKNKKKT" CDS join(453045..453116,453163..453269,453322..453543, 453595..453789,453839..454136,454183..454445, 454536..454824,454873..455048,455095..455221) /gene="CBG09854" /locus_tag="CBG_09854" /standard_name="CBG09854" /product="Protein CBG09854" /note="contains similarity to Pfam domain PF04916 Phospholipase B contains similarity to Interpro domain IPR007000 (Phospholipase B-like)" /note="Predicted" /db_xref="GOA:A8X9T6" /db_xref="InterPro:IPR007000" /db_xref="UniProtKB/TrEMBL:A8X9T6" /protein_id="CAP29401.1" /translation="MKLLFFLFGLIAAIDQEKPWLGDNRVPVEQVMSDHSSGKFKYEY VSVCVNGTDETLLDIVHDKECKDAKSRVALGKYSNQVNTTGWGILEIETFASHSYDVQ AYAAGVAEGELTRLQIYYHYRNTIETMCNNHTLFCKRLYVYLQQNLDWMRSQVQSHPP TDPFWRQVNLTFAQLTGVYDAYSKRNLTPEIGFDLHPIYMMQLAGDMFDLNKYLNKTP DPLEYPEAGRCSGFIKLAPGNKDLFIAHVSMSSLSWMQRILKIYKFGYDVNEVPGHIV TFSGYPGALISSDDYTITSAGLTSIETTIAIFNTSLYTDKYMSAEGQVHCWVRSMVSN LLSKTGKQWVDTFGRYNSGTYNNQWTVLDWKHFTPGQPIPDKDVLWISEQTPGYYESR DMTWYLKKYTYFASYNIPFLPKISERSGFDTKAKQFAWYEWGGSPRARIFDRDHQTVT DIDSLTKLMRYNNYKHEEFARCKCTPDPWTAEGGISARGDLNIPGGTYEVESMGFRDH AGLDFKGTNYEMFKKLRFRAWGGPPYGDVPPFDWNNTNITNVRHFGQPDFWNFTYVDL EWELATKVLLTPVPSI" CDS join(460158..460400,460445..460575,461897..461966, 462241..462447,462494..462735,462912..463036, 463430..463590,463645..463711,467113..467184, 469723..469859,470078..470233) /gene="CBG25883" /locus_tag="CBG_25883" /standard_name="CBG25883" /product="Protein CBG25883" /note="Predicted" /db_xref="InterPro:IPR013761" /db_xref="UniProtKB/TrEMBL:B6IHN8" /protein_id="CAR99394.1" /translation="MQNGHRPIKPRVKSMNMILMADEDFKVLPENTSENIPVLRRRKY TKQQRKSLVIEPDIGLILATGGSGQSTSSDDDDTKVQIDSNTLPSNRRKYGGKRNMKK RFHSTSNLKGTTENENDENSTKQWTSQIFAELESLPSSRRGSMDVTKSLINPPELVIN LATSSLMTSSAPAPPPSPLKRKRFPMFDEESSTFLPIQPVPSPRTSKKQAEDVVGPTF LRDLLKASCSQYPYSESNCSDRLATSDTATQKPSRASSFEWMNPECADHGKYEECSSD EADREVALIGMSKQSNVLQRKKNLEELEKSVNELESLGNSSWFPDPQPPPDEAIDQIF DSLPAFGSVYDNTFSSIITKPSSSSETPQQKTIKTIEKPFSLENLPMVQRLSELSASK NNGSKKEVTKRNNTFADFALQLSERDALDACSWLRKAGFSKYADQFEEGKLPIKPSQD PTLPETDLRSLNRRIEILNKCHTMKVDSVPMRRRMLTVRGPCITGSRIYEIQILLEIA RLFNSFHTSKKLEKKRQNNTKIINSGNL" CDS join(472878..472927,475848..476038,476125..477013, 477063..477174,477225..477451,477534..477701, 477963..478145,478734..478851) /gene="Cbr-gei-1" /locus_tag="CBG_09855" /standard_name="CBG09855" /product="Protein CBR-GEI-1" /note="C. briggsae CBR-GEI-1 protein; contains similarity to Pfam domains PF00620 (RhoGAP domain) , PF01852 (START domain) contains similarity to Interpro domains IPR002913 (Lipid-binding START), IPR000198 (Rho GTPase-activating protein domain)" /note="Predicted" /db_xref="GOA:A8X9T7" /db_xref="InterPro:IPR000198" /db_xref="InterPro:IPR002913" /db_xref="InterPro:IPR008936" /db_xref="InterPro:IPR023393" /db_xref="UniProtKB/TrEMBL:A8X9T7" /protein_id="CAP29402.1" /translation="MPFVSYLYPGHHNMLDRFDKTFELPSRSLIPDRMYDDLDVLPKS SKTTNLNSNSTSNSNSLDNNKNSENISMYNDGYYTHEIKPALPRHHNISKPENLKVNT EKIEVLSSSDEPIGRTTLTKRSDSGLGSSLSRSPSGPHTQRIRQSLLPYSNATSAGIS SAYSCCSWESSAKLSDEQPFFAEIELARSIDSLNLIEMTRLRKTAYLRLCSTLERNIE GKVNLTDPDQDELPSKHVWSVHRLIKRMKINDGQKNQKDNEDGAVFGVGLDVIFQKTG YFLPRPILEVMKFLRNIAPETVGIFRKNGVKSRIAELRSIIESYSGNTDVFVGENILD STQVHDVADLLKQYLRDLPEPLMTIKMSEVFANICSVVPDVDRMTSLQYAILLLPDEN REALKTLLLFLKEVSRNSQVNNMTAQNLSVCFTPSLFQLGASRLDKVTPGSRRHKTVG ATGLPSEKEMKEARACQLCLTMLIEYVQTIFMVPDGLDEHTDAEDDNPNLTDLGLKGP RSFLVDRVIDMIREHSDGWKNWTIEGSFRGVEVSSRRPFHSSGLTEIRGACAIAERSV KCSEDQLLGGIAATIFDQRFLIEPVSGGQSRVNYIARVDLKGRSLQWYNKSFGSIMCR HLDRLRESFLLGDKGGPETNV" assembly_gap 473069..475357 /estimated_length=2289 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(479542..479802,479852..479985, 480034..480484,480536..480799,480848..481090)) /gene="Cbr-prk-2" /locus_tag="CBG_09856" /standard_name="CBG09856" /product="Protein CBR-PRK-2" /note="C. briggsae CBR-PRK-2 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8X9T8" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/TrEMBL:A8X9T8" /protein_id="CAP29403.2" /translation="MTLPVLAKKMKKLASLQFFNLKLLLNGESSRGFSKFKKNYKLKA ELGRGGFGVVYRAVRTSDNTLVAVKFIERSNVKEWARINGEQVPMEICMLAKCSKIRG VIRLLDWYSIPEGFLIVMERPYPCIDMFDFIKGQGKISEEMAHFLFRQITVTVHECVQ NRVLHRDLKDENVVIDLVTGSTKLIDFGAATVLRRSQYSDFQGTRLYCPPEWFLHSLY LGREAAVWSLGVLLYNSLNGRLPFRNEKDICTAHLLGPLPFFVPVSSEVKDLISKCLT FDPFQRCSLEAILNHPWVKQQPLSWELLTKNKVQKKTSMEKSDDHISETLGEQSETEE ERSHPTTVSTSKQPGTSDEGVGLSASSSHTPPKKQHKEHRMAKTSLLAPPTSVEMKAA VQASKTPTQFNVHTALKNQRQIKKHQSPHAVNSTVLTALRRAMSREAQNRISGVFLQD " CDS complement(join(489502..489768,489827..489916, 490394..490504,490549..490706,490736..490866, 490980..491228,491725..492046,492093..492394, 492440..492634,492681..492903,493578..493660, 494797..495250,495301..495370,495681..495788)) /gene="Cbr-hecw-1" /locus_tag="CBG_09857" /standard_name="CBG09857" /product="Protein CBR-HECW-1" /note="C. briggsae CBR-HECW-1 protein; contains similarity to Pfam domain PF00397 WW domain contains similarity to Interpro domains IPR000569 (HECT), IPR001202 (WW/Rsp5/WWP)" /note="Predicted" /db_xref="GOA:A8X9T9" /db_xref="InterPro:IPR000569" /db_xref="InterPro:IPR001202" /db_xref="InterPro:IPR035983" /db_xref="InterPro:IPR036020" /db_xref="InterPro:IPR040524" /db_xref="UniProtKB/TrEMBL:A8X9T9" /protein_id="CAP29404.2" /translation="MITLKRREVESDKPSTSEIGIFVSKDIVYPFGNKSEIIKVWWNI NKSENCLDWIGLFDANDSSFYLDQKSLRQHISPVVFTLTSKNLLNASEVYFGLIDGMT GRMLSKSKNIEICKSATLIFHGITNPRNFFLETEISEVKKPDNIHVYLNTNQGRVEIP KVRKLGSSKKNVTFNSYQMGFDFDFEFEDLHISLVKHPEMDNFDHFISANQLQNNFFQ SKSFSHNYTVDIVFSIEPKTSRKVPNIMEIASSSQTPSESQWKTYVDAKKRKFYVNHV TKETRWTKPDILNNNSIEPMTPIHQKFADRSDSARNSFITPRRTIAIRSDGCPKNDLI HFFKRDEFKTALYENHEAMKIYNECSVVRHAIHRIQKDSDPPAKFENQPLFVRFANSF ADVTQPLPSGWECISMNNRTVFLNHSNKETSFFDPRIRRFETKTTKRGRSVPSRSSNQ IKNKIDHALISKCEDLRKIAQDNFPQIAERISKKLMLIERFGGLAVASLANDLDITLA LSMLDSSTEKSKKTEEGDSIKLFYEEMKKEKLGKGPSRLCWKVSRDRLLDDAFRVILS VDPFVLKKSRLHIRFEGELALDYGGLSREFFILLSRELFHPNNGYFEYEGNDYHLQLR PRGCESEKERKWLTLCGKVLALAIIHRCYIDVFFSNIFYKCLQRKPIDLSDFQESDAD FYKSMNWLLENDVDALEMSFVYSSMVNGKAIFFQLTEQELLNGGDKKIVTNSNKTEFV ELMCQKKSTRGIEKPLEIILESFSQILKADILNGMCSSELKRILSGSLELDLNDWRIN TIYKGGYSDCHIVIEWFWEVIETMTNQERFDLLLFVTGSSSVPFEGFSALRGNDEISK FCIEKWGDATSLPRFSIFGILEVYSIFRAHTCFNRLQLPSYNTKHNLKSKLQQAISNG MSYSIE" CDS complement(join(496808..497234,497283..497969, 498025..498234,498282..498460,498478..498489)) /gene="CBG25884" /locus_tag="CBG_25884" /standard_name="CBG25884" /product="Protein CBG25884" /note="contains similarity to Pfam domain PF07735 F-box associated contains similarity to Interpro domains IPR008162 (Inorganic pyrophosphatase), IPR012885 (F-box associated domain, type 2)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:B6IHN9" /db_xref="InterPro:IPR012885" /db_xref="UniProtKB/TrEMBL:B6IHN9" /protein_id="CAR99395.1" /translation="MEILQWYSHIVSLFDQFFYLAVVFFLSYLAFQVSEMMNENPFPL HKFNVVELRAIFKHLSLDDIVQLSFTSDDIRNALGEVSLPISAVEIFYSPRKSSIKLK SEKGDILWTDRYPNTPMTFVGEIKIGRISLKCMKSGDGFHTRLTDIGQGVFTALTYFT DIFNFKNAAISELALDLSIVPDSRIVCSQFTAFTSIERLAVHESIRDEDAEKAFALNF GWIMKNLKPKEIYIGVEIMEPVLTKRRGRFDIHEMPRRFEQVCDGTITPSTSFFQIFD LDHICVKYSEWITEKDFFNLNVKTAILMNSSLSETSINKFIKKWLESDLDRLNWMEVK LPDRSFQQEEILEGLDVEDDTYRLENTRCSCPFRRFETVESVPFEFPTASKKVTRDSD STIATISIIRDTFFFHVRNDGPVTPPVPPPPPEQPEQLAQFEQGVVERIMRRDPDEDG REPDEDEFQVDEDGDEVDIFNFLQIQENERNDPMAFFHRHQAIRRLQRRRNQQN" CDS complement(join(498924..499425,499481..499752, 500168..500546,500592..500804,500851..500939)) /gene="CBG09858" /locus_tag="CBG_09858" /standard_name="CBG09858" /product="Protein CBG09858" /note="contains similarity to Pfam domain PF07735 F-box associated contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /note="Predicted" /db_xref="InterPro:IPR012885" /db_xref="UniProtKB/TrEMBL:A8X9U0" /protein_id="CAP29405.1" /translation="MAQDETEFPLHDLDYISLNEVYKNLTLVDIFELSFTNSLVRGTL NKASVPIQSISIRFESGTPLIHLKSGQHEFIWSFGYPEKAEYIGEGHYAIRAFKFQCK RTASGYHTEHYDVEHAMLAVIRYLVAIFNCSESIISELFIDVGVIEDSRSVCEHFMKF KTVERLAFHQSVDNDRNKLNLAQNFNWILENLKIHELYCGVDLFEQKMVRTPEGEFEI RRLPLRLDKALRLNHFCLKHATWFTSKDLMELYADTAIIGGNELTAEDLNTFLKNWLN STSNKLCWLEIQFDAEDEERKAKITEGLELTLSSYKLINEKCSCPYRRFESSKRVPFE FPADTKQITRADGEIGTIAMTSDTFFFHVKNTGPITPPKVPDGVRPPDSVRIVQERMH LVNAERLHHELMYRQFEMDNLQRILNKEQTKSQTEEDDRLRKRHKDLVRHLDKELGKL EKNEVGRRERVEREGQVVEAAMNVAGVIAMNNIH" CDS join(502207..502293,502659..503249,503298..503374, 503663..503790,503836..503924) /gene="CBG09859" /locus_tag="CBG_09859" /standard_name="CBG09859" /product="Protein CBG09859" /note="contains similarity to Pfam domain PF04727 ELMO/CED-12 family contains similarity to Interpro domain IPR006816 (Engulfment/cell motility, ELMO)" /note="Predicted" /db_xref="GOA:A8X9U1" /db_xref="InterPro:IPR006816" /db_xref="InterPro:IPR030731" /db_xref="UniProtKB/TrEMBL:A8X9U1" /protein_id="CAP29406.1" /translation="MEAEPLDTETEDEKKWRQERMRVLDEWCEIELKGADALKTDVTH EPGSPTAAVASETTFPELYRLLVATTPGTIPRETPEEFAKEIIESRTSEAPDNRSAFD RIIDVCLCRPVKAQISPTVYTDKMLILKLAETPYSHENGTHWLILTDYFNNVSKALMT SSEYTTVANPGRVGAHWVTVGFQSATPHTDFRGCGVLGLLQMLTFTQKVPANILKAIV LLATTEPNDFPLAVVSINITSLLLTLLKKGAFDNYGNENEGLYPFFSALHAASMSRFC SIYKSQNSTLADTQTIFSEITRQLEKSPLSLLNLLSTSNDELINTLL" CDS complement(join(504200..504271,504315..504662, 504713..504811)) /gene="Cbr-mlc-4" /locus_tag="CBG_09860" /standard_name="CBG09860" /product="Protein CBR-MLC-4" /note="C. briggsae CBR-MLC-4 protein; contains similarity to Pfam domain PF00036 EF hand contains similarity to Interpro domains IPR002048 (Calcium-binding EF-hand), IPR018248 (EF-hand), IPR018247 (EF-Hand 1, calcium-binding site)" /note="Predicted" /db_xref="GOA:A8X9U2" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR018247" /db_xref="UniProtKB/TrEMBL:A8X9U2" /protein_id="CAP29407.1" /translation="MASRKTVNRRQRPQRATSNVFAMFDQAQIQEFKEAFNMIDQNRD GFIDQEDLKDMFASLGKEVTEQFIDSMINEAPGAQPINFTMFLTLFGEKLTGTDPEEV IRNAFQCFDEDNSGKLNEEHLRELLTTMGERYTEEQVDELFRDAPIKNGQFDYVEFTR MLKHGTKDKDEA" CDS join(506400..506671,506729..506913,506960..507063, 507200..507349) /gene="CBG09861" /locus_tag="CBG_09861" /standard_name="CBG09861" /product="Protein CBG09861" /note="contains similarity to Pfam domain PF02330 Mitochondrial glycoprotein contains similarity to Interpro domain IPR003428 (Mitochondrial glycoprotein)" /note="Predicted" /db_xref="GOA:A8X9U3" /db_xref="InterPro:IPR003428" /db_xref="InterPro:IPR036561" /db_xref="UniProtKB/TrEMBL:A8X9U3" /protein_id="CAP29408.1" /translation="MNTASLVRSLTRVALHSTNAVRMAAPRHFSSTAKMMSVTPELQQ ALNREIEAEQQLSKDNLQGSVAPTFPGFAVTTKEAEVRLTKKNGNEDILVVFNVNHSV DMDEGFDDEPSQAVAPVPVALPPFTVEITKGDQRLCFHLELVPVDDQPEEYDFRVEEF YVAPSAKNGNEDVPSEVYASSGKYIDPDLHDLLFVRYLEERGLDARFCKTLVAYATHY EHSQYVGLLDKIKKFISM" CDS join(507643..507802,507849..508046,508096..508298, 508353..508433,508492..508758,508806..508898, 508948..509121,509174..509284) /gene="CBG09862" /locus_tag="CBG_09862" /standard_name="CBG09862" /product="Protein CBG09862" /note="contains similarity to Pfam domains PF03205 (Molybdopterin guanine dinucleotide synthesis protein B) , PF06807 (Pre-mRNA cleavage complex II protein Clp1) contains similarity to Interpro domain IPR010655 (Pre-mRNA cleavage complex II Clp1)" /note="Predicted" /db_xref="GOA:A8X9U4" /db_xref="InterPro:IPR010655" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR028606" /db_xref="InterPro:IPR032319" /db_xref="InterPro:IPR032324" /db_xref="InterPro:IPR038238" /db_xref="InterPro:IPR038239" /db_xref="UniProtKB/Swiss-Prot:A8X9U4" /protein_id="CAP29409.2" /translation="MGEEQVQEFKLKEDCELRFAAGEDSEVVLELVHGYAEIFGTEII LNKKYNFPAKSRVAVFTWKSATIELVGATESAYVAESTPMVIYLNIHAAMEESRKKRE EQAVSNSSKPKGPRLLLVGPQDVGKTTVSRILCNYSVRHGRTPILVDLDVGQNSVSVP GSVAALLVQKTADVVDGFERNMPIVYNFGHSSPSQNLSLYETLFKALASTINSQIEQN DEARLGGMIINTCGWVDGEGYKCIVKAASAFEVDVVIVLDHERLYSDLSKELPEFVRL THVPKSGGVEQRTAQIRSATRGENVHRYFYGTRANNLFPFTFDVPFDTVTLCKIGAEQ LPDSCLPFGMEVENHETKIIIIEPSVEIKHHLFSFSRGSIAEKNVLTSSVWGFCLITE VDMEKRTISILCPQNTIPSKTLVYSEVTHLDDQIER" CDS complement(join(509702..509818,509865..510008, 510125..510995,511039..511475,511660..512136, 512211..512633,512683..512775,512831..512848)) /gene="Cbr-npp-9" /locus_tag="CBG_09863" /standard_name="CBG09863" /product="Protein CBR-NPP-9" /note="C. briggsae CBR-NPP-9 protein; contains similarity to Pfam domains PF00638 (RanBP1 domain) (2), PF00568 (WH1 domain) contains similarity to Interpro domains IPR000156 (Ran binding protein 1), IPR000697 (EVH1)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X9U5" /db_xref="InterPro:IPR000156" /db_xref="InterPro:IPR001876" /db_xref="InterPro:IPR011993" /db_xref="UniProtKB/TrEMBL:A8X9U5" /protein_id="CAP29410.3" /translation="MSDQKTSIGRVVAGVVDVQATMALQFDSLAKGLEALKLEHQSGI SQLREDFRRSEDRSQKQLSDINALHGKELERLHQIIQTLLTREANPVGATSIVPAQLQ QQQQIMLMRQMEYAHAQAQAQAQAQAQNQAMVNLLSAANGAPKQVVPAQQPVIAQTPQ IKPQVPPVQTAPVSLLPKTAPTAEVTVPVVKPSFPSPTVTEKPSTTLVEKPKAAPTTP ATQGFSFGGATPSTSIFGKKPETAAVPTPVVVPSADADDDDEKEDDYEPAGEFTPVIP LPDLVEVKTGEEGEQAVFTNRAKLYIFANETKEWKERGTGELKILYNKDKKSWRVVMR REQVLKVCANFPIVGSMSIQQMKSNEKAYTWFCEDFSEDEPAHVKLSARFGSVEIATE FKNLFEKAVSEHKSNGTIEKEIKPAEVKKEVKKEIKEEVVIPSNSGFGDKFKLKPGEW DCPTCYCKCADDATECLACGTPKDPSKEKNIFKPSVLQPPTGTPKVTFGFGASAPAKA PAAQTSQFGASLNGSPSTNSNIFGGGTPKGTSMFGGGATNTPTFSFNKPAAATNATTP SFNFNKSGSTASPAPSATGNALFGGGLGKTDSTAAAPSFSFSKSTESVAAKPSFSFGK QATPTASPAVADEKKIIETPKGVFGSSFTTGLSTFASVAANGTGNIFDSTNAQKAQQE LASQKKTSVFGSKTNTPNTTAANDDNEDANEDGDGEYEPEVNFAPVVPLPDLIEVKTG EEDEEVMFTARCKLFKFHSDLQENKERGLGDIKLLKSKDNKYRIVMRREQVHKLCANF RIDKSIKLTPKQNMPNVLTFMCQDFSEDSTTADAAIFTAKFKDEAIATAFKNAVLNAQ STM" assembly_gap 513594..514365 /estimated_length=772 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(514816..514898,515015..515143,515199..515358) /gene="CBG09864" /locus_tag="CBG_09864" /standard_name="CBG09864" /product="Protein CBG09864" /note="contains similarity to Pfam domain PF09341 Transcription factor Pcc1 contains similarity to Interpro domain IPR015419 (EKC/KEOPS complex, subunit Pcc1)" /note="Predicted" /db_xref="GOA:A8X9U6" /db_xref="InterPro:IPR015419" /db_xref="UniProtKB/TrEMBL:A8X9U6" /protein_id="CAP29411.1" /translation="MEVDPSSSSSSDEECEPSVESAAYVHSASVKLSVGCEEAARTIA GVIKIDKEPSRSGARREVSSEGEYVVINIESRDPKSLSKSISNAVDMIELSAKTLKMC DSFTKTRENGLKRKLPDKSLP" CDS join(515520..515633,515679..515804,515852..516103, 516151..516636,516681..517025,517073..517200, 517613..517738,518828..518918,518965..519156, 519205..520869,520914..521147,521331..521414, 521606..521775,521819..522479,522524..522763, 522813..522929) /gene="CBG09865" /locus_tag="CBG_09865" /standard_name="CBG09865" /product="Protein CBG09865" /note="contains similarity to Pfam domain PF01465 GRIP domain contains similarity to Interpro domains IPR000533 (Tropomyosin), IPR000237 (GRIP)" /note="Predicted" /db_xref="InterPro:IPR000237" /db_xref="UniProtKB/TrEMBL:A8X9U7" /protein_id="CAP29412.2" /translation="MFKNLKNRLDNEAGKLKQSAQQYTEQIAAQVGQYRQAMNEQATG SDANASISKRFLNSVTGTTNPEAGESKVEDLADVSIESSSAIMSEIPEADLLGLGLSS TESPSNRRRRSPSAESTHSNESTLASLLQSIPNVISSAFETIPSDSESVTSEAFSVRS TNDPAYNSRLKQRLASYKAKYRDAVHRHNRLVDEVTATKKILETTQDECLQKVEKLRS EKRVLAEKLRDSVGNRDGKDDLEKKCEDYKRMLEQCKNKIKALQQEKRDQLINVDDDE SPRIKELESRIQKTEEEWTTRINESDQQHAIVLATTKAEMHGALEKKDSEIEQWRRKC AVLEQQDADANQRWNEKVEKLQAMNKALEAENNEMIDKLSEAKTQGVKAVLEEEEKKR NILESDLNEEIERLKEEIEKMTLEMSSYKVRLEAKESSEFDEHNEDIETLKLEIASVR SEKIDLESKVADHVSSFDIYRAEAEKTLAAAKEQFGKKVSECDKWREKYEERAAASDH IATVEFETQETEAHRILEFEVEKKTLTEKCENLISKFEQAEKEKNEMAKQLSLLQQEM LEKCDALQIELNEARALREETQRKYDDVAQKAEQMQTELDQNKKDVANEKEAFEKEKE QERAEQLNKAFEKLVCFRKVLNCMFLFSFQAEEQKTLQDVSKRLEKSEEDVALSQKSI EELTQQLSASQKETTEAHAQLSEVSTKLDGSQVLKNVNFPIRFHNKNIFQTSLKEFSE LVESLKLQLVTSEKQKDDAVELLKQKLEDIEKNFSEVTSQKQHLQESMTAELKTHAES TESLKKQLEEAQASVESLKKEVENERNLKSAIESHENTAISEMKKQMETAKKELETCE KEKSTLRDHMERIQKDHDSGKEEIQNLQKTWEVEMIKISKATEDEKSAREQLLKDLEV LRESSKQVEVERDAEVDKIQEHLKVSQEHQTALNQKIQELQDALKESQDQVIELKTAS SNMTSETEQNVAENASLRSSVEQAENIQKFLQEEIQHLKTSLEASEAKAEGLLTSTSS DTEKHSEEISKLRSSLEEAESLQKTSTDEIHRLQESLKNSQEQCQSAQARVLELEKQE QQKSSEESNQMQIMQRDLDASHRENRELQEKCQVLTDSLSTANESVQSLTSTTEVSKL DNESLKQRIEKLEKEIQAREQNEQALTEEINVLTTSLAEKEQQMAQVNDLQTKLHQME VEKEERVESVKVQLQQAAESSSSATQISESLRSEIEQLKTKIRETEDAKIQNSTEVEQ KVNELNDLNEKMRVEFIAKEKIISDLRAELAAINNDLVVQKAKVEKSKMDMDELESKE KRAASDRENEKQEEIRLRETFAKELETMGSALEAKETAYNELKQRAEKKIAKLNAQFE EKLKAEAEKLVNAQKNQDEASESRIKELEASSEQSKLELEQRLRSLEESLKSIQSEND ALKLKEEAAEKEKGHWEVEKEMLEGEAKELAEKIEGLESEVKRLTVANESKAAKADTD SRKVVRELQKEVKQLYNELNDKNQQFDALHEEFTNLKSTSESVQNGQLQVQKQQDDED RRSEFSYKEEIASLKQKLDASLNEADDLRMQVSRNDKNPRSNGNAVKTKTPSMELHGI ADPAEAEYLRNVLYRYMTNREALGKESVTLARVIGTVARFDESQMKQVIASEETRQAS WAAALNRS" CDS join(523391..523555,523607..523759,523803..523921, 523964..524062,524107..524260) /gene="CBG09867" /locus_tag="CBG_09867" /standard_name="CBG09867" /product="Protein CBG09867" /note="contains similarity to Pfam domain PF10294 Putative methyltransferase contains similarity to Interpro domain IPR019410 (Nicotinamide N-methyltransferase, putative)" /note="Predicted" /db_xref="InterPro:IPR019410" /db_xref="InterPro:IPR029063" /db_xref="UniProtKB/TrEMBL:A8X9U9" /protein_id="CAP29414.1" /translation="MNILKLTNGRELSYLNEVEIRMGIDERKGEERYKDELENMGISD ITVHKYEGGFKIWECTVDLCDFIEENQSLFAGKTVLELGCGAALPSILTAVHGAKEVF AQDFNASVIEFFTIPNFEENPHSAVVQGEAMGWEEVPTKLNGRKFDFILSSETIYNEE DYQALHDALVAAIKDDGVAWFAAKFFYFGVGGSVPAFCQFINERGILVASEAKVIQAS VPRRIIEIKKV" CDS complement(join(524476..524595,524643..524775, 524818..524885,525521..525688)) /gene="CBG09868" /locus_tag="CBG_09868" /standard_name="CBG09868" /product="Protein CBG09868" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9V0" /protein_id="CAP29415.1" /translation="MNETDELYEMSMTIPKADEDDDFALRIRSEKSIPNTLSTPPTVV HHRHHHHHNHKKNRREKNEELCQNQRKIVELNTQSHEFDPPFVVEVRCLNTQSSNGNV FSGQEQTCFKGMLRCVQQYADVHVSRRSVGSIHWHPYTISDVPVSCQCMWPVDRYGHQ EF" assembly_gap 538540..538767 /estimated_length=228 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 541402..542401 /estimated_length=1000 /gap_type="between scaffolds" CDS join(542696..542890,542988..543413,543477..543596, 544061..544243) /gene="CBG25885" /locus_tag="CBG_25885" /standard_name="CBG25885" /product="Protein CBG25885" /note="Partially confirmed by transcript evidence" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/TrEMBL:B6IHP0" /protein_id="CAR99396.1" /translation="MARSKLISRSNFLEKRCPKLRLFYRFTVTVNYCITRFDCVLPVD SCRFTAGLEAEASGKQCQLWTLNSTTHLIDDVNEQSKYVASKIAQISGESGPEQYEGL YSIQTMLCEGSFTLWEQNFAKLLIAVFHVLSKSDSDANKKVALRVLTKMCTSQASRLF DSTEMAICKVLDAAVNSAEGTMNVTADDCLKTLATHLPLAKVVNICKEKIQEAKASLV LKMMTRLFEGLQADELSPIIEDLAPCAIQAYDSPSSVVRKTAVYCLVAMVNKLGMQTM NSHLQRLSAGKMNLVQVYVNRAMSSSTHSHV" assembly_gap 543762..543771 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(544491..544566,544614..544674, 544723..544880,544930..544988,545031..545305, 545351..545714,545763..545840,545888..545965)) /gene="CBG09871" /locus_tag="CBG_09871" /standard_name="CBG09871" /product="Protein CBG09871" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9V1" /protein_id="CAP29416.2" /translation="MSVEVLKERRLGIIRFTGFDDIDEIEQAEEAETPAQVNKRKRGG RKRNRRQKIEGTETVKNEQKNTDKNNPFKYSRLLQEIHDREKIHGMRREEARQLLEDK LLFLGDTSLQNVHLRRSCLVVTSDETFQLEDGSKIPSEIITVSMDNGKVSSILRFFPS KTRNFEMESVENYQNHRMRRVYWNPSVAKDTNLMFRTWSHFLDRCLLSLLLVPLNKMD QLLDFLRKINEIRTSLNNRVTVSICLSRVICVEDYLNAVQNVMNTQIIFKSTPTMDLV PLHFALDYCRHQLESLDLVIKSVANYTSYQYYAAPKHYETSGFEMTNWSCHQEAHISM EPEKYQRILHWLSQMSLDESENLEENYDRSMSYEEAEDNDEQDFARTP" CDS complement(join(546125..546304,548620..548676, 548724..548890,548938..549093,549141..549372, 549416..549517)) /gene="CBG09872" /locus_tag="CBG_09872" /standard_name="CBG09872" /product="Protein CBG09872" /note="contains similarity to Interpro domains IPR018381 (Transcription factor Tfb4, fungi/metazoa), IPR004600 (Transcription factor Tfb4)" /note="Predicted" /db_xref="GOA:A8X9V2" /db_xref="InterPro:IPR004600" /db_xref="InterPro:IPR036465" /db_xref="UniProtKB/TrEMBL:A8X9V2" /protein_id="CAP29417.2" /translation="MSTLSLLVEASSCSWGKLACQHGDRTIGIILRAIVSFCNAHLGQ SASNQLLVFAFGRNVEKKLIYSSARSEDRNVSSVVVDHLRDLLQSDSGNSDATMGAPI GPALAHAFCHMKKDSQLATADICDDSLGPAASNTEKSDSSTEKVSTRAVVISMTPIIG SEHGSLMNLFFSAAKQSICVDVVSMSDDLTGGILQQAADITGGSFVHAEKPQALLKIL MTNMLTDASYRNTFSKLSYCSVDYRASCACHHTLVSSGWVCSICLSVLCQYTPICKVC KAAFTITNLPKKPSRKRTLRS" assembly_gap 547410..547959 /estimated_length=550 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(551121..551306,551355..551606,551654..552221, 552605..552905,552953..553022) /gene="Cbr-swsn-2.1" /locus_tag="CBG_09873" /standard_name="CBG09873" /product="Protein CBR-SWSN-2.1" /note="C. briggsae CBR-SWSN-2.1 protein; contains similarity to Pfam domain PF02201 SWIB/MDM2 domain contains similarity to Interpro domains IPR003121 (SWIB/MDM2 domain), IPR019835 (SWIB domain)" /note="Predicted" /db_xref="InterPro:IPR003121" /db_xref="InterPro:IPR019835" /db_xref="InterPro:IPR036885" /db_xref="UniProtKB/TrEMBL:A8X9V3" /protein_id="CAP29418.2" /translation="MQSQQRPPASQGSRYGHPGTPQQVRRQANAPLPGQTAQLQNNRG PQPPKKKKRYADKLIQPKVRELVPESQAYMDLLAFEQKLDSTITRKKIDVQEALKRPQ KIKKRLRIYISHTFIAGKEPEKEGDEASVPMWELRVEGRLLDDMLQQLQQQQQPGGAA AAASANPRAPPKRKFSSFFKSLVIELDKDIYGPDNHLVEWHRTPQTNETDGFQVKRPG DRPVKCTILLLLDYQPMKFKLHPRLAKVLGIAAETRPRIIEALWQYIKTHKLQDPQDR DTINNDLFLEQCFGVKKMRFMEIPQRLHQLLQQPDPLILNHIIQRPEDGQDKTSACYD IDVELEDPVKQQMASFVHNQNNANDIQVLDRKIYDLVDQINEMKLRRDFFLRFSNEPS GFIKKWVVSQNTDLKTLTESNGDGEADRHANTYTTNDADEGVSRYMYQKVQQKRAELE QSLGIRNN" CDS join(553548..553653,555046..555314,555356..555457, 555733..556008,556057..556139,556184..556312, 556359..557042,557090..557234) /gene="Cbr-ttll-4" /locus_tag="CBG_09874" /standard_name="CBG09874" /product="Protein CBR-TTLL-4" /note="C. briggsae CBR-TTLL-4 protein; contains similarity to Pfam domain PF03133 Tubulin-tyrosine ligase family contains similarity to Interpro domain IPR004344 (Tubulin-tyrosine ligase)" /note="Predicted" /db_xref="GOA:A8X9V4" /db_xref="InterPro:IPR004344" /db_xref="InterPro:IPR013815" /db_xref="InterPro:IPR027748" /db_xref="UniProtKB/Swiss-Prot:A8X9V4" /protein_id="CAP29419.1" /translation="MSSGYSSAPSVSHTSSEADLNRIESYEDGVDEEASDEQRMCGLS ELVTSCLTSSKSSRQKDSFEDDDDVPIEIVGTLKKSKSKKKKQCPPNITIEKKNGNSS PFLKSSQFTDVPPTIRFYTKGTKVTKPARKIQSRLTWCHNSLLPIVMRQTLSASHFTI VDESLFHIGYWGRHLKSAQYKALQPHQKVNHFPGAFHIGRKDRLWMHIRNRLEHFGEE FEIMPFTYILPTDRQELLKYLETDVNRHVIIKPPASARGSGITVTRKPKDFPTTATLV AQHYIERPLTINRAKFDLRLYAYVPTFEPLRVYIYDQGLVRFASVPYNPSVTNISNKY MHLTNYSINKLAEADGIANKPVPKWALHQLWDYFDQMGVNSQKIQKEIEDVIVKAFIS CEKPIREHMSRFLEQEFICYELFGIDIILDEDYKPWLLEVNISPSLHSGTSLDVSVKA PLAKDVLNLAGIHVPPSFDKLHTADYSCRPRNGTKTREQLVKEASWVAAYRDQHGAID NRIFKRLTPEDTRALVEFEDELDRIGDFKLVFPTAQTAHYQKFFAEPIYMNILLQQWQ IAQEGDRSIGIDRLEQLCRQKHMQSDQEISF" CDS complement(join(558150..558701,559371..559502)) /gene="CBG09875" /locus_tag="CBG_09875" /standard_name="CBG09875" /product="Protein CBG09875" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9V5" /protein_id="CAP29420.1" /translation="MEIRYIIGQGYCSYRKQANRTSHLTVNFEPIYLTISFCERYQKA QKTYVNTIRLYTTDTSVGKEEEEEEEEEDDDDYYDYYYYYYDYYYDDEEEEEEEEEDE EEEEEEEEEEEEEEEEEEEEEEXXXXXXXXXXXXXXXXXXXXXXXXEEEEEEEEEEEE EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEAVYADVEEGVGDQGSEGVSR FLFLLSTFV" assembly_gap 558390..558460 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(563479..563672,563722..563809,564628..564959, 565060..565135) /gene="CBG09876" /locus_tag="CBG_09876" /standard_name="CBG09876" /product="Protein CBG09876" /note="contains similarity to Pfam domain PF00011 Hsp20/alpha crystallin family contains similarity to Interpro domain IPR002068 (Heat shock protein Hsp20)" /note="Predicted" /db_xref="InterPro:IPR002068" /db_xref="InterPro:IPR008978" /db_xref="UniProtKB/TrEMBL:A8X9V6" /protein_id="CAP29421.2" /translation="MPQNRTDFDDDDLESYLEGSVWSEKPSASEIFSNRPGDVISVFP HASHSNMIYGYPSNFRETVFPTQRGSTDPSYDDYYTKVSTIFKLQAQMEKITERRPRS PGPVAGAGEITNTSHGFTIEIDVFHFLPEEIKVVLTDDTLSISGERFESTGDGHTLRR SFSRFLGREFQMVDNIILESTRSQKTFTWIPSEAISLILEFSSSMALAKDGARLASPL INQLKDTSPEV" assembly_gap 569777..570776 /estimated_length=1000 /gap_type="between scaffolds" CDS join(571825..571917,571964..572059,572132..572419, 572467..572884,572929..573959,574008..574457) /gene="Cbr-cls-2" /locus_tag="CBG_09877" /standard_name="CBG09877" /product="Protein CBR-CLS-2" /note="C. briggsae CBR-CLS-2 protein; contains similarity to Pfam domain PF12348 CLASP N terminal contains similarity to Interpro domain IPR024395 (CLASP N-terminal domain)" /note="Predicted" /db_xref="GOA:Q61J98" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR024395" /db_xref="InterPro:IPR034085" /db_xref="UniProtKB/Swiss-Prot:Q61J98" /protein_id="CAP29422.3" /translation="MSRVVSRTVPGGACVVNKDDFLKSFNDVDKVSVSSLADAKSKFD QVIAILSKSQEDWNKRRTQLQIIRSIVINCEDVIGRDQLLGQLVRLADCLDLSVKDLR SQILREAAITCSFLFEKYGNDVHQIAERCLPTAFSQLAVSTKVMATSGATLTLFLVQY VQTKQIFTCLTTYSTSKDKNQRRQLCVLLEIVIEHWNDKLKKSILPQIMELIKSAISD ADPETRAAGRKAFNKLDAIHSEEADKLFASVDANKQKMLRASDAASSSTSVNSERGSA PFRSKLSAGSVGGMRNVPNISSKFLAQRSASAIDTKQVTRMTTSVSRTPNTRPMTTRT LSKVDTSPGGSKFARPTVGTLGPRTTSNLRARGSVPTSQPGSRNGSPPRRPSTTGTLP MEMQRVKSNLGSSSFVSSLTPDQAESLQKAMNTAKESLGQPSRTEDDEFLLPKRKPKT PQKSAVDISRVEAVIRACVSTSANEKRDGIKMLSIIVSEPNLSQIELKNIGQVLNRLL GEATNPVVLESVASFVKAHHSRLSEWLKLGLGKMFAKKGSEMMPIMKKHIVTTINAIL SSFDPALQLKATCELMCDPIHLLSPKARVALLEYLTDLLEKHMERGSPFNTKEVKATI LKMFSWMSDQRNMQQIVPHGEKVLCGLFALNAADFSALFNDFNPDYREWAYRILQAHG HNQHAPAPESPSPVRDQQVRANISNTAAQIEDFVVARNFELSAEKSPTSRGMLTSGFK RTDAEPLRPLESDMNTQRMDDISINESFDRLKVRILETTGFYAAFKVDFQE" assembly_gap 574597..578070 /estimated_length=3474 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(584223..584292,584888..585153)) /gene="CBG25886" /locus_tag="CBG_25886" /standard_name="CBG25886" /product="Protein CBG25886" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHP1" /protein_id="CAR99397.1" /translation="MDSLIRSFPFLWFRVYENALFELNGGPIMNPDWSYEQCVMLRDW TLWAMSSNVEGGRLPNIARYLRELNCPVSASILAVLSSWTIEVSLISEIGISVFRNLR ISELQKLKI" CDS complement(join(586856..587359,587412..587586, 587637..587902,587948..588247,588289..588489)) /gene="Cbr-mett-10" /locus_tag="CBG_09879" /standard_name="CBG09879" /product="Protein CBR-METT-10" /note="C. briggsae CBR-METT-10 protein; contains similarity to Pfam domains PF06325 (Ribosomal protein L11 methyltransferase (PrmA)) , PF05175 (Methyltransferase small domain) contains similarity to Interpro domains IPR010286 (S-adenosyl-L-methionine dependent methyltransferase, predicted), IPR007848 (Methyltransferase small), IPR017182 (S-adenosyl-L-methionine dependent methyltransferase, Mett10D, predicted), IPR010456 (Ribosomal L11 methyltransferase, PrmA)" /note="Predicted" /db_xref="GOA:Q61J97" /db_xref="InterPro:IPR010286" /db_xref="InterPro:IPR017182" /db_xref="InterPro:IPR029063" /db_xref="UniProtKB/Swiss-Prot:Q61J97" /protein_id="CAP29423.1" /translation="MAQGNEMHPRNPYRDKPPDFKALAIEYPEFRKFCQYVSNGKVTL DFRKDAAVRCLTQTLLKKDFSLNVNLPAGHLVPRVPQKLNYCLLIDDILQANSITSNV VGIDIGTGTSCIHALIGARHFGWKFVATDGDENSVQVAHENVARNEMGDSICVVHVNP AVKTVLMDVINSMPDSEFSFCMCNPPFFEKSDKEERFCEEPSLSNETYSNNFDFDMRS APHSETIASSAELYVEGGEVAFVNRIIDDSVCLRDRIKFYTTMIGRKSSLKPLLQRLE RFGENVKFLVHPLNQGKTKRWMLAWTFAKEMTLNTALKNSSISFQCPKPGLVKLMQEI SRLGGRWSQEQPSVLVAEFKSVTWTNQRARRKANALLFENSAKRARWNTSSVACEAMM GNGDGKDSYTNSGNFVYSESFKTSDPAAVETSSQAYFPLPSGVTPRPIVKLRIQVDPD DKCDTLSFELISGAKQHLHQIVQYLKNLLCR" CDS complement(588848..588928) /gene="CBG25887" /locus_tag="CBG_25887" /standard_name="CBG25887" /product="Protein CBG25887" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHP2" /protein_id="CAR99398.1" /translation="MICFENRRSELRNRLRYRNAIPEWKL" CDS join(589029..589165,589206..589417,589467..589701, 589750..590055,590122..590404) /gene="CBG09880" /locus_tag="CBG_09880" /standard_name="CBG09880" /product="Protein CBG09880" /note="contains similarity to Pfam domain PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase contains similarity to Interpro domain IPR003788 (Protein of unknown function DUF185)" /note="Predicted" /db_xref="GOA:A8X9V9" /db_xref="InterPro:IPR003788" /db_xref="InterPro:IPR029063" /db_xref="InterPro:IPR038375" /db_xref="UniProtKB/TrEMBL:A8X9V9" /protein_id="CAP29424.2" /translation="MKTSVSAPVVGYYGQFSRDQKVFGEKGDFITSPELTQLFGEMIG VWVFHELANTGHKGSWQLVELGPGRAQLMNDVLNALAKFNDNDVSVHLVEMSDALIDE QENFLCIYNSENTKGTPHVRKNKTRTGVNIYWYKSIDDIPDGFTVFIANEFLDALPVH QFKKTGDLWKEVYVNLTKEGDLRFMTSKGENLHTKGLIPAAIRNENSRLTWECSPESG TVVNQIVDRITTFGGFSLLVDYGHDGSRNTHSFRAYKNHEQVDPLSNPGVVDLTADVD FGYLTTLVEDRALVYGPIEQRVFLTQLGIEHRLRRLLQICKNREEQEQLISEHIFQIL LNPFILESYNMLIGDMGTKFKAWALFPKTLKFILDQRGGPVGFLSKEKAEKKANDE" CDS join(590658..590660,590714..590859,590904..591048, 591122..591391) /gene="Cbr-vps-29" /locus_tag="CBG_09881" /standard_name="CBG09881" /product="Protein CBR-VPS-29" /note="C. briggsae CBR-VPS-29 protein; contains similarity to Interpro domain IPR000979 (Phosphodiesterase MJ0936)" /note="Predicted" /db_xref="GOA:A8X9W0" /db_xref="InterPro:IPR000979" /db_xref="InterPro:IPR024654" /db_xref="InterPro:IPR028661" /db_xref="InterPro:IPR029052" /db_xref="UniProtKB/TrEMBL:A8X9W0" /protein_id="CAP29425.2" /translation="MLVLLIGDFNMPHRSANISPKFRKLLVPNKMQHVLSTGNLCSRE TFDYLRTLSSDVHVVKGEFDDEMLKYPDTKVVTVGQFRIGVCHGHQIIPWGDSRMLEL LARQLDVDILVTGNSYECNAVEKSGRFFVDPGSATGSFSVNKTGPVTPSFALLDVQAD NVVTYLYRLIDDAVKVDRIIYKKSKST" CDS complement(join(591665..591751,591807..591919, 591978..592109,593022..593121,593948..594019, 594071..594205,594258..594326)) /gene="CBG09882" /locus_tag="CBG_09882" /standard_name="CBG09882" /product="Protein CBG09882" /note="Predicted" /db_xref="InterPro:IPR029034" /db_xref="UniProtKB/TrEMBL:A8X9W1" /protein_id="CAP29426.2" /translation="MKAVWCSIFLFYAVFIGYVGSQTCQCIQPDPSALNCLGYDSKLQ ADTIDEAIASFPDLSMNDGNVDATASDVGCVTQECQDCRKDMRKQLQKVGLLAKDIND IISTQMNTNSTCTKYRFSIEKQKLSVDPTGTVSLCSSCWVWRRLPDNYRPQYINELVC DNSDGECLSGYATCAIGHRTFEATRNDNGVMTQVTLTAGSYCECRISKSSSLQSLVTG SGISGTYSPLHNQTGVL" CDS join(597865..598004,598464..598771,598817..598905, 598950..599228,600328..600457,600505..600659) /gene="Cbr-srt-55" /locus_tag="CBG_09883" /standard_name="CBG09883" /product="Protein CBR-SRT-55" /note="C. briggsae CBR-SRT-55 protein; contains similarity to Pfam domain PF10321 Serpentine type 7TM GPCR chemoreceptor Srt contains similarity to Interpro domain IPR019425 (7TM GPCR, serpentine receptor class t (Srt))" /note="Predicted" /db_xref="GOA:A8X9W2" /db_xref="InterPro:IPR019425" /db_xref="UniProtKB/TrEMBL:A8X9W2" /protein_id="CAP29427.2" /translation="MKFWILILCFLFIPPVSTTCYNLGSLQCWPEEIQEMILMISGED TYRYNCSGKTDEEWYKTGVKRVGWGIYYVTAGIFFQLIGWPVLYIFLTKFSMTHALKV YRVMVFIGLIEITEVWGNSIWPGIVAIFGEVYCTSPRITTIAGKITMVQWVLGSSSAV FLGLHRITDLSQKGEWLVNTNLKTSFWLALLSVYSIYGSIFYDTILFNSQYMAPIFNP MTGQEGIVYSNNFLYFHNIIVSVLLISVYTLLCYLWMSRDMHASSHHVSKFQRSILYQ SICISLTYAVPACSFASMFLFTTPAWFFHASDITYQLSGGLPFIMYISLNQKVQDEFL DLVGICPGKRHKAVAPTGNSAMNSYISGTAKI" CDS join(602442..602590,606339..606637,606685..606767, 606829..607107,607159..607329) /gene="CBG09884" /locus_tag="CBG_09884" /standard_name="CBG09884" /product="Protein CBG09884" /note="contains similarity to Pfam domain PF10321 Serpentine type 7TM GPCR chemoreceptor Srt contains similarity to Interpro domain IPR019425 (7TM GPCR, serpentine receptor class t (Srt))" /note="Predicted" /db_xref="GOA:A8X9W3" /db_xref="InterPro:IPR019425" /db_xref="UniProtKB/TrEMBL:A8X9W3" /protein_id="CAP29428.2" /translation="MKTLILWLLVTQPFMTALANSECHSVYSRECWPRKIQEMVGMMA GEDIERYNCSGKTEMQWMETGKTSIVWGVYYIATGLFFQIIGWPILMILIFKMDGLTV HRILAFIGFVGITEIWGNSIWPGISVIMGTVYCSHPFVTTFFGKLTMVQWVLGSTTAI FLGIHRLSNLFTKNRTENNWKTIGWFSLFVVYSLYGSLFYDTVLFNSRYMAPLLNPQI DPQSTDYTNYFLRFHNITVSIALVLIYGIIAAIWSRREIVVSSSYVSRTQASILIQSL IISATYAVPAIFFDLMYYIKDCPASFTMAADLSYQLSGGEILKPYGTMVL" CDS complement(join(615331..615396,615447..615587)) /gene="CBG09885" /locus_tag="CBG_09885" /standard_name="CBG09885" /product="Protein CBG09885" /note="Predicted" /db_xref="GOA:A8X9W4" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR011333" /db_xref="UniProtKB/TrEMBL:A8X9W4" /protein_id="CAP29429.2" /translation="MTTVDDIDPDVMRELLVYMYTGQARYIDQMAQSLIAAADKYQLD RLKVMCEQAXSFLSDLKFGENCAI" CDS join(615903..615945,616099..616184,616230..616796, 616844..617242,617293..617427,617474..617623) /gene="Cbr-bath-43" /locus_tag="CBG_09886" /standard_name="CBG09886" /product="Protein CBR-BATH-43" /note="C. briggsae CBR-BATH-43 protein; contains similarity to Pfam domains PF00651 (BTB/POZ domain) , PF00917 (MATH domain) contains similarity to Interpro domains IPR002083 (MATH), IPR000210 (BTB/POZ-like), IPR013069 (BTB/POZ)" /note="Predicted" /db_xref="GOA:A8X9W5" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR002083" /db_xref="InterPro:IPR008974" /db_xref="InterPro:IPR011333" /db_xref="UniProtKB/TrEMBL:A8X9W5" /protein_id="CAP29430.2" /translation="MLNRSPGSNPLASSNKPKSAIGDWGSDGSRSRAMEAGMINDEVV SSGSGSSAQGRSISPCPSTASHGDPLLPVAENWCHTQVSYSQAQTLVQMNRKFQVKVV KFNYMWTINNFSFCREEMGEVLKSSTFSAGCNDKLKWCLRINPKGLDEESRDYLSLYL LLVQCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEA NGLLPGDRLSIFCEVSVVAETINVTGQTNVTQLFKVPPCRLADDMQGLFDKQQFSDFT LICKSENGAPPQTFYIHKAIVSARSRVFSAMFDHHMQESDTNMTTVDDIDPDVMRELL VYMYTGQARYIDQMAQSLIAAADKYQLDRLKVMCEQALCYQLTTENACLTLVLADMYS AAQLRAHAINFINVNAAEVMSSEGWHGLVRDHPKLLEEVFRALAMQQTPPVVLVQPPK KRPKHNCPY" assembly_gap 616017..616026 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(618055..618237,618285..618371,618430..618641, 618691..618781,618828..618915,618963..619116, 619169..619354,619407..619536) /gene="CBG09887" /locus_tag="CBG_09887" /standard_name="CBG09887" /product="Protein CBG09887" /note="contains similarity to Pfam domain PF04056 Ssl1-like contains similarity to Interpro domains IPR012170 (TFIIH basal transcription factor complex, subunit SSL1), IPR007198 (Ssl1-like), IPR007087 (Zinc finger, C2H2), IPR000433 (Zinc finger, ZZ-type), IPR004595 (TFIIH C1-like domain), IPR002035 (von Willebrand factor, type A)" /note="Predicted" /db_xref="GOA:A8X9W6" /db_xref="InterPro:IPR000433" /db_xref="InterPro:IPR002035" /db_xref="InterPro:IPR004595" /db_xref="InterPro:IPR007198" /db_xref="InterPro:IPR012170" /db_xref="InterPro:IPR013083" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR036465" /db_xref="UniProtKB/TrEMBL:A8X9W6" /protein_id="CAP29431.1" /translation="MDDDEQKGYTWEAGYAEGLNINEVLVEDEGGSIEKSIAKYVADS KRKARLTKRPEKIRLGIMRHVMIVIDCSRFMTSKAMPPSRFVVVMKALQQFLERFFEQ NPIAQIGLITCKDRKADRLTMMTGNIRILKESLSSLTEAFCGGDFSLQNALQLACVNL KGMPGHVSREVVIVMAALSSIDPGNIFSTIETMKRMNIRCSAIGLSAEMFICKEMAKA TKGEYSVALDPDHLHLLFSKHTLPPSSAKSSECNAIHVGFPHHELIKTRSFCVCHPDS KPISLRGFICTQCGARHCSIPAECPVCKLTLVAAPQLARAFRHLQPLAAFKQIEVTRG SCYACETRFSDEGFRCEKCRLVFCLDCDTLLHESLHVCPGCN" CDS join(619737..619836,619881..619979,620500..620673, 620751..620923) /gene="CBG09888" /locus_tag="CBG_09888" /standard_name="CBG09888" /product="Protein CBG09888" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9W7" /protein_id="CAP29432.2" /translation="MITPEKPKRSRLQQQPGTPIPTSRRRDDLVNIPAVYNPPVSKLK KNYDLEFGRFLRSAKIVLDFLDKACNLKYHNFNKNDKNIVDSITSAILNMRITRKPLD GLKHVPMLSKRISVKRWYQKHYDPLSQTESDNESDDDGSSDSENSSLRNGAANSNADD AADISSDEAENDNDFDAFFND" CDS complement(join(621205..621245,621293..621578, 621634..621798,621846..622226)) /gene="CBG25888" /locus_tag="CBG_25888" /standard_name="CBG25888" /product="Protein CBG25888" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHP3" /protein_id="CAR99399.1" /translation="MARVTIDEIKKMLETEKELTSVMDKTSRMLKRSSEALEKYMTIS GKQMEVMEKHTKALERNTETMEKYIEIMENQLTKDRHRKRSERIRLPSTSSEIMEISI PPLPTPATPEPTVKKAKVEVQVDNSTSSTQYKAISRWSAPTQMEQIAIATPSLLNITP NVQPSSGSHQMASQFSNPFRQKMTGCIYCSDNNYGHTSEMCPILKDSLARVNFMRLNR LCFTCAEPIFRCPGNYQCRFANRKCHHCPGTHLNALCVVKYPPINPSNSKRRKTISTA KNDAYSSAMFKKSI" CDS join(623458..623522,623575..623662,623706..623802, 623825..623957,624305..624395,624441..624503, 624551..624652,624699..624962) /gene="CBG09891" /locus_tag="CBG_09891" /standard_name="CBG09891" /product="Protein CBG09891" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9W8" /protein_id="CAP29433.2" /translation="MPVNRHDLSRSRVFYEAKQYLNEGFATEEELCNFVLAALKRILK SLFLSEEIENVVECLVLSLFRSQSRDEEIGKNIKTNLKYVVNSFKNSDLETVLREHDP EFKDFHRKLSSSITNFIAYFTLHTIRQHCFATFGVEGDLKIYQRQMYEKAREDSRKKT VECKTTIKSESSRQQSASKPEPVRRENKQVGTSIKQEKKDSSDDDFCEIIEPMPAKKM RLTSTSETKSEEVVKVTDKPPVEFPEKQMLDKLEADEAVGCPIFKTLFRTTVENNNIT RHHIRDMTENVKILINDKRNLKMD" assembly_gap 625992..627081 /estimated_length=1090 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(628172..628221,628387..628467,628512..628593, 628650..628816,629519..629737,629784..629927, 629975..630159,630233..630258) /gene="CBG09892" /locus_tag="CBG_09892" /standard_name="CBG09892" /product="Protein CBG09892" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9W9" /protein_id="CAP29434.2" /translation="MPSQEKEEDEGLRKIEESINAVLDPYQQSHVPLKIKKKKKRFLL PKSRDINLSKVRGKRIVELFRAEPFLMNKRHSRTKEDNEKRSRAYEEIAAQMNKEFRN MEGFKEITSFQAAKLADYWKDRIPDNRNSEEPSLLLTGQYTVSPSPPIFPTPPDSPRD KLEQLQQMTIRRKQTAERLQFIVNTADMFMSKTGLDKQPHGRSAEVNNIRTKVWRRIQ EETNIRFNSLKPYNLVQVKKAVSNYKRRKEEAKNIIRNKKYITKHELEEPQNEEKPVM TADPWVAEMDVDNTPIYEDTDDIQTFQDVINYANSVLQDSR" CDS join(631409..631474,631543..631835,631881..632084, 632129..632425,632474..632608,632659..633013, 633058..633132) /gene="CBG09893" /locus_tag="CBG_09893" /standard_name="CBG09893" /product="Protein CBG09893" /note="contains similarity to Interpro domain IPR019734 (Tetratricopeptide repeat)" /note="Predicted" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR013026" /db_xref="InterPro:IPR019734" /db_xref="UniProtKB/TrEMBL:A8X9X0" /protein_id="CAP29435.1" /translation="MEESNQDEIIGVVTVHNGEDGEQNGMETNGVEAEPIPDRPPPKR VEILDCNSLNGLMYHYFAQGDYIECKSLIGEIQSKYKEKNEAAFHVRGLIARNEGELE EAMDCFEKAYELSGKNKKYFYETGRCNFLLGRHQIAVEQLRKASEVMKDNPKVWYWMA RAIYHLPSEKIPGKTFNPTETARNLLMGSTVAKDAELITFLGRLCEELQDTEGAIAAY ESAMKLQPDNTDVMIRLALVLLRMGKEKEGFEQLGNCLAYDPSNSQAILTLGSIMQQH YDHDVALNKYRVAADACDYNGCLWNNIGIGLLARNKSAAAHSALKKASFISPLDYKIS FNLGVLHDIMKLHCSALHYIKLCTELKPNNAKAVGAMAVILSHMNDVKNARAAYKKSI ELQPSPSIVNTLLLSFHVFWFQVLNYAIFEYRTKNFAAASTAVQIYKQLEASGMKCSA NHKQTASLLDSVLKQHEETPPTEN" CDS join(634229..634456,634501..635435,635480..635713, 635759..635942) /gene="CBG09894" /locus_tag="CBG_09894" /standard_name="CBG09894" /product="Protein CBG09894" /note="contains similarity to Pfam domain PF00806 Pumilio-family RNA binding repeat contains similarity to Interpro domain IPR001313 (Pumilio RNA-binding repeat)" /note="Predicted" /db_xref="GOA:A8X9X1" /db_xref="InterPro:IPR001313" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR033133" /db_xref="InterPro:IPR033712" /db_xref="UniProtKB/TrEMBL:A8X9X1" /protein_id="CAP29436.1" /translation="MSQQNALNTYMAQNKPINGRIYESPALSQAHNEPANATFGGCFN SYNSSWAPSKNNGQSFTPLFQSTPKQYGGPFKHSSWRKATPSYTPRRQASNLGSVRLR LIDLELNDTTTFSLSNSHNRSLRSTLPVWAIDENGGVSESVTLKDVLANKALFEFATD KNGCRFLQEQYPADSDGGIHDDIFRRMVEDRSLFLSMCRNMFGNFFVQRMVECSNNEE QEIVMEHLVTDMYTLCLDKSACRVIQLAVQKLETHLASRLAAELRDADLVRLSIDQNG NHVIQKIIKTLPVSAWDFVVKFFCNDEHLIAVCQDKYGCRVVQSTIEKLSEDPELECY GQRLHLLQKLMVGITRNCGQLASNEFANYVVQHVVNCGGAMETFRDIIIEQCLLRNLL SMSQEKYASHVVEVAFLRAPHRLAFEMMEEIFEGYIPHPDTNRDALDILLFHQYGNYV IQQMINICCNAIIGRSEHHLEQKEIEQYTKWLERIKERVSRNSNRLERFSSGKKIIEA LQASSIGTLMSPPAGQYY" CDS complement(join(636928..637066,637114..637352, 637404..637607,637657..638070,638117..638248, 638639..638978,639024..639413,639465..639880, 639928..640021,640064..640173,640217..640294, 640339..640411,640463..640713)) /gene="CBG09895" /locus_tag="CBG_09895" /standard_name="CBG09895" /product="Protein CBG09895" /note="contains similarity to Pfam domain PF08389 Exportin 1-like protein contains similarity to Interpro domain IPR013598 (Exportin-1/Importin-beta-like)" /note="Predicted" /db_xref="GOA:A8X9X2" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR013598" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/TrEMBL:A8X9X2" /protein_id="CAP29437.2" /translation="MAHVASAAIDSDLLIATIDEFYTTTNEQRRHDIDKILCRFKSGT VELLQIILLFLKITLEYECVQTVGACMRIINQEKCSPNVRYFGAVALYDVIKVRSEEC VVNQTLQMSVKTFLIDSLTSGAYVQSTSILNKLSAALALFSLYCIPEVWMTPVEDLTQ LLATTPEILLKVLSDMAAEFAHVVMPLAQRSRLKAELHKFSENIIQILAVVLRGGDTS SITKQAAVECVEQWLRLPGICLDAWTQVLSDVLGAVVQDCTALASILDIIAENDEFHR HSMLIINICQYICVNVSQKIEDELREDATSEEITALVAATCLVAEKSIPTLVECAVQG GNSELVIQMSRVMQVLANLQGQYPLDEMVSDLPSSYFISLRCEVMQTSSSGSTINDQL RNEFSQIYAEILDVAIRKLRYPSMEIWLSWSLYDREIFDAYRKTRSDASYDSYNFSAI DTLNYLNQKLEEATNNGDVNTSEACLFQWECVANYLGESDYTPILKCLELCASSSFSA STSSPTLGLDSDRRGGTLMGVLYALSYLIQEHEQAKELECALIPVILSYVSPNVPSVR QAIETLQKFTEDRSESLDIVGDQVSTRCYEFFNAPSASDSDRLAALKCIGYVLSRKPP SETMKIIGQILSYQNINEAGIDEKIRHRRYAFQINIFSTLFASLSSRKEIESTEEEPT IVQLLKEAIPVFEALCCGDENGLNKKNSGSLIQEVCKAVRSALTSLPERYIASFFPFV VSLVNTALFVSESVVAACGLAKSTVLQCGSLVGADMANAFSHWVKTAEQHMESSQLDE YLQLIHQVVKKNWKMIRKFEDPSMFAFLSATKICSFIIINSSVPTEVRSASQVLAALS TYATSHDDAAMKTVFAENGPTLLRAVFGRIQGELMRPTVEALADILYFYFKEFTTETR ALISAEPYGSSALITAMFREIGNLRNFKQQTIRFNLAAVRDPGSI" CDS complement(join(641061..641234,641296..641765, 641851..642063,642112..642322,642370..642471, 642518..642861,642907..643494,643545..644139, 644183..644311,644357..644409,645434..645653, 645712..646086)) /gene="CBG09896" /locus_tag="CBG_09896" /standard_name="CBG09896" /product="Protein CBG09896" /note="contains similarity to Pfam domain PF10363 Protein of unknown function (DUF2435) contains similarity to Interpro domain IPR000169 (Peptidase, cysteine peptidase active site)" /note="Predicted" /db_xref="GOA:A8X9X3" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR019451" /db_xref="InterPro:IPR024483" /db_xref="InterPro:IPR039600" /db_xref="UniProtKB/TrEMBL:A8X9X3" /protein_id="CAP29438.2" /translation="MTVVCKLISSTKPSGEETCRETATTAAQPAAASPGRVVKGRILI KTSQRRSPRTRANLRSYLAMVLLISLTVDVYALATTNPDCPDLFSQLTGLHPLANITM VMLLHLICLFSGLSRTVPGCRLAWFFFMVSLVLMMLVPAFIGSYMASGLAPEMRWEKF EANNNITFVSELTAAQFRFQTAFYMAVEGQLFVFILFISETWKSDPFEILLKQCPKEV FDKFVDPTIEDPTPSTSDGAKTVNADARAHYSRILGGLYLELAGVLESQRATTDDEYQ LISLQEIAIIKDSFQFFLLTGVIPFLEPGVCLPASARSTFIKSWKVYDGNKETCAVKV RSATVYFEKENNFQLDFAAKVIVALLKCNDAIASQFMKKFIDDVIAIQYQLNELKVNN YEAQLEEIISKCPVDLLFGSLMFLSRGGKSAEPPMWLKGACGRTLSKILVAEGGLTLM LQYYQERAGENWTDHLPMTKSVAWCLAAVPKIFSHPRKYHENISNQFFEIIWSQKEVD KNTLNLFVSYVNEVHVRFSLNADLTVFDKILNFWELLDKKLQNKEQKHTEKIEGFSTN DIRNLQLLSQMQNSYNVKRIRQLTTCFFACAEQIPYIKDILRAILDSVGSLGYTIYQY VITPSLAVRLVKKSVTSSKIQEVGETNGNETPSEELWVDGFSDSDESVGHRIDTAFYV IDNVLTAARVRTIMEMINVALEEFLKVSEKEREDDMARFVQLDGAKLFSSTHSHFIVG CCYERLIAIAGERGFAQDECIQLLRMTENILNNATLKFVRMANRKQSVDVFQMTETEV KEFDSTRSTVRLCIPLITAIFSLTRGASRMQEIATKALEAIANFTKASDLFPSSDVVF NNTIDETKRYLKTLKIDVNDIVPPVVPQRNERRRYNQIDLCNEWIEELHDDEPAVKGG ALMQISKAFRQRTWHCQKLIEYGAYDTVKDMVIDDDSYVFLSAINCLCEMALYDRHFF EGLIEYYEELINATNKDEKLVIRIGRTAEAIGKLLISRGESSITFFDRLATAFMTGIE ASDEILRASSCGAFGNLLVATRGRGVEKWLDQMLLKVTNILRIDRSPLVRRSATDLIR HSLKAAGKDILVILRESLLDLHREVRNLWKTDRDETVRLHAQLCCEEIDAALRTNQEE SERGYHRKIRF" assembly_gap 648803..648812 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(649402..649502,649553..649742, 649786..650052)) /gene="CBG09898" /locus_tag="CBG_09898" /standard_name="CBG09898" /product="Protein CBG09898" /note="Predicted" /db_xref="GOA:A8X9X4" /db_xref="UniProtKB/TrEMBL:A8X9X4" /protein_id="CAP29439.1" /translation="MTVSYEKMNPPYENASVLRRIRKVDCRVWFFMLIVGGIAFDVTK LEYLVQYGFKINTIHIPIYLIFNAFLMYAAVWNHRIPMKIVKVYSLVLLLFSTIIATL APIWMVFEFKNGAPEHIRFMMEHGDSHPMEFRQSLGYCILLELTLVFDAGYYALQMYL ARKVIQKIECERKQTPIEMDPIYVA" CDS complement(join(651752..651840,651887..652022, 652066..652389)) /gene="CBG25889" /locus_tag="CBG_25889" /standard_name="CBG25889" /product="Protein CBG25889" /note="Predicted" /db_xref="GOA:B6IHP4" /db_xref="UniProtKB/TrEMBL:B6IHP4" /protein_id="CAR99400.1" /translation="MCEPPSFPPPAYEDSSPPPSAPVDESTQVAVPIEAPPNDRYPGV CKPDTDVRTAIFNFMLWNWFFTTPIMYVARIYGIFAIPFNYNVFVTAAVTYQHPDCLK LLMRFANTFQVILWTAGPVYFLFYIITYKSSSVLEFITVFCAIVYFLVASATMHHQEA LAKQVRALVQAEKKKKMNTNQA" CDS complement(join(652814..652923,652973..653189, 653236..653547)) /gene="CBG09900" /locus_tag="CBG_09900" /standard_name="CBG09900" /product="Protein CBG09900" /note="contains similarity to Pfam domain PF10912 Protein of unknown function (DUF2700) contains similarity to Interpro domain IPR024483 (Protein of unknown function DUF2700)" /note="Predicted" /db_xref="GOA:A8X9X5" /db_xref="InterPro:IPR024483" /db_xref="UniProtKB/TrEMBL:A8X9X5" /protein_id="CAP29440.1" /translation="MAGYREKMAGDESLIQSDPKVEDRVETPSTKMTACERLQSYTPG LLLQVFALLKFSFVLYLSINGRWNEKEMPIVILVLGHNTLLLLAATFQDFCTLVLCWI TTCATFILHIILLVTVPIFVTSYFASDTARTVRIPNEWKLFRELINYQSAEERRFNDG IQNGMNVEMFLVVLVFIFGIQMALINSTLNAKLDQLKREKQLREKRNSVYLV" assembly_gap 656624..657243 /estimated_length=620 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(657950..658030,658068..658177,658471..658586, 658647..659013,659063..659141,659185..659264, 659311..659425,659781..660038,660080..660262, 660310..661082,661130..661804,661852..661966, 662014..662175,662223..663177,665306..665589, 665640..665888,665936..666462,666510..666731, 666779..667099,667149..667263,667433..667666) /gene="CBG09901" /locus_tag="CBG_09901" /standard_name="CBG09901" /product="Protein CBG09901" /note="contains similarity to Pfam domain PF01433 Peptidase family M1 contains similarity to Interpro domains IPR014782 (Peptidase M1, membrane alanine aminopeptidase, N-terminal), IPR001930 (Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase)" /note="Predicted" /db_xref="GOA:A8X9X6" /db_xref="InterPro:IPR001930" /db_xref="InterPro:IPR014782" /db_xref="InterPro:IPR024571" /db_xref="InterPro:IPR034016" /db_xref="InterPro:IPR042097" /db_xref="UniProtKB/TrEMBL:A8X9X6" /protein_id="CAP29441.2" /translation="MRRKVIFSSIALCLLCTVSTAPLTDSEDDLITANEPNIENVEFN HPHILPAHPDNFRQDKLEARKRQSLYVTKTRLPPNLFAIDYTLWFKPYFPCPNVQYEP EKNFTFDGRSSMQVEALVDSDRFVINSYNFKIKSYKAVAIDGTVVPINSICKRKIRNL VQESHSHLFTAQDDTTQQLSLITNAGGVVAGQIYNIEIVYTGIINPYTDGGVYYSSFN DPQGVQHYMIATHMEPFSARKVFPCLDEPSYKATFQITLQYPSVHVALSNMEEAPATD MGNGWSEIAFPPTPKMSSYLTAFAVGSYVNSKYVNQHGTLTRAWGWPGTEQYLQFAAT NAGDCLYQLGEYTGIKFPLSKAGECFQGPHSVTIWRLDQLGMPEFLAGAMENWGLIIY KYQYIAYNPTTMTTRDMQAAAKVMCHELAHQWFGDLVTTAWWDDLFLNEGFADYFMTF IQKYVYPEQQNYLDTIQVLNELQVGLNADVRSDAHPLVYPDGPAFDDITYNKGASMLR MLSDVLGPVYFKEGIRDYLNKMKYSNARNIDLMSTLTDVSFFKYSIFTQFIIQTAKAN DIKDWCGNLLNVTDFMAPYLHQTNHPLIRYNNNQKVAGIASFTQEPFASLDNLNATQW NYKWDVPLRTSTLVYPEPHLLWIPRQQGCPNTPEVEKVEEPKKRATQWDFTTIGSATY GRVIYDDIGFDRVLKTIKQDGINDNIALQLMADEYYYMLREKNAGRPYGYDRFLNLAM AYFNTANFIEFPSYSAFAQAQIVLEQVAQMYRDTIDAELISVNNFKYFPSNDFFRECT RRFSKMCTTLFHGPIQLFGIQSMYFNIRKKLKKKQKMGFSTFSEVFLPFAVRYGIGDV EKRTMTMFANVKSACSNSLNGTAWCNPYPTNVRKAIYCGAAKYAPATSDFFFQMLHAY NKEVITNPYFYQEYMSLLEGMSCTQMPATLKTLIRLFSTSTLNSNTIFGFLKYNPVAG DALYNYLSANPQLVSSPILNAYLDSMTYNWNSYERDAQFATLMNSMDLTDAQFQTFSN YLDRINQAWGYRSTYGLKVLNWLYDNVVIIGKTPWDKAYVLLFSRYIKKSIICSLNGD VIDPVYTLSLQPNIPGSGFFQSYRNMTFSAGLQIDFTLTKPTSAIKINAHRLAIDSDG IALWSIDDDGNQKAILIDSRNVAKDYDRGVLTIPPSGQLTLFPQKYRLAFQYNGFIFQ NPNEGDASNTYFGGLNNRKGWIFTTDFEGGPGARSLLPCWDEPSYKGRFLVDVMHSTD MIALSNALETGTQIMVNGWSKTTFESTERMSSYLFAICVGHFSNLAKVSQFGTLARVW TWSGMEQYGEMALNVTVGTLEFMSKYFSFDYPLKKLDVMALPEYTQDAGAMENWGLII GEYSLFMYDPSYATTLQIAEVAETTAHEVVHQWFGDIVTLDWWNDIFLNEGFAQYWFA NGIDNTYPEQHDYAIDYNRFYMNHIALKYDCIAGYAKPVISDTPPVFGIEPYYKGSAL LNLLNNALTPAVFQQGLQSYLTQFGYSNASPQDLWTFLTVAAQSNNLTDWNGQPLNVS SFMNAYTLQTSYPIITLALRGTSTVQATQQSCMSGTALWNIPLFTQTQQSTGSYSTCS SLKTPKHSDFNWFVDYAGGNDNVWLRPLPSPFRIDNAGSTVGILKLLHKRFRILILQS FARINYDDKSWYSIQAQLLSNYNSVSATTRAMLLDDANFFYETGRWDMRKYLDLTLYL VNEDSLAPWEQAITFFNEILNRFQYQPELNLMQNYVIKITKNAVSKFGWTTNGIWTND RIVQLLVNVNNLSGDRQTRQVAQTLFNDFVKKCQYSRDGTGKCSGIHPNLRSAVYCYG LRQSLGFEDYNAVNGLYTWFTQNAGYLQTDGANLLNALGCSSNNVLLKSMLRSILVGD YPPSLLNSISLHDDSGYIMYNFWMDNVSDILNAPFDLSIYVQAMFQNWSTQNQLDLAT DFTNGFDWELLTADQKKTYKAGISLVQRNFNWMMVYKSELVAWIQSNI" CDS join(667843..667885,667935..668049,668094..668436, 668483..668908,668950..669000) /gene="CBG09902" /locus_tag="CBG_09902" /standard_name="CBG09902" /product="Protein CBG09902" /note="contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase domain), IPR006186 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X9X7" /db_xref="InterPro:IPR004843" /db_xref="InterPro:IPR006186" /db_xref="InterPro:IPR029052" /db_xref="UniProtKB/TrEMBL:A8X9X7" /protein_id="CAP29442.3" /translation="MANTRSTYGNVNNKSDFNVDEIIVKILNIGSIGTNFEAIISTKH LFSLLDVVKDVFMKQGVMLELEAPVKICGDVHGQYSDVLRLFDRGGFPPLVNYLFLGD YVDRGPQSLEVVCLFLAYKVKFPGNFFMLRGNHECGSINRVYGFLDEVCRKYGPKVGA GLWNTFQYTFSCMPMTALVSGKILCMHGGISCKMKNLNQLRKIARPQLEVPNPSMEID ILWSDPDTTIDGFDDSTRGVGQVFGEAALKSVMSNLGVELVARAHQVVQDGYEFFCKK RLVTIFSAPHYCGEFDNAAAMMNVDKNLTCSFQIMRPVRKDVSKKDENN" CDS complement(join(669414..669526,669576..669693, 669759..669941,670025..670069)) /gene="CBG25890" /locus_tag="CBG_25890" /standard_name="CBG25890" /product="Protein CBG25890" /note="Predicted" /db_xref="GOA:B6IHP5" /db_xref="UniProtKB/TrEMBL:B6IHP5" /protein_id="CAR99401.1" /translation="MDSTLSDPPPSYDEAWERYLFTKTNFFIFWCLLMLNIFTAFYEL GAFHIVVYVILCGVYIALISATLLRMHLILSVLFLALITTMITVTGIITVEYVLEEDL KPFTVTLLIGSIFMLLVQYWILRILDKHMEIREYLEDIERLLEAGGIQVM" CDS join(671787..672020,672671..672895) /gene="CBG09904" /locus_tag="CBG_09904" /standard_name="CBG09904" /product="Protein CBG09904" /note="Predicted" /db_xref="GOA:A8X9X8" /db_xref="UniProtKB/TrEMBL:A8X9X8" /protein_id="CAP29443.2" /translation="MVTLTNVYTEIFKHRKMFSKENLLMLWCFLMIIDLFLEYYLVKM NMMFYIIAGIVYTILIGCIKLESLKGLRFFRALTYILIHEHIYSLELVPAMQILSFGP ARPVEQVASVSFTPSSAASLASTTLQHSPAPSTLSPMHTSITFSNSNFSL" CDS join(673426..673707,673757..673877,673926..674011) /gene="CBG09905" /locus_tag="CBG_09905" /standard_name="CBG09905" /product="Protein CBG09905" /note="Predicted" /db_xref="GOA:A8X9X9" /db_xref="UniProtKB/TrEMBL:A8X9X9" /protein_id="CAP29444.1" /translation="MDPSQTTPPSSQLSIWLGLVRLMLDELFQHRPIFNQNNLGLFWC FHIMAHAFAQYRLDLQHFSIYATVFFVYGLLVIVLSLKVIKALRFVRALTLVCFYLLT ITMVVQLLTSISRGNGLQWIITDLAVNFILIAALAMQYIILNETVISQEIEHLIDNVP LV" CDS complement(join(674755..674843,674893..675106, 675154..675360)) /gene="CBG09906" /locus_tag="CBG_09906" /standard_name="CBG09906" /product="Protein CBG09906" /note="contains similarity to Pfam domain PF10912 Protein of unknown function (DUF2700) contains similarity to Interpro domain IPR024483 (Protein of unknown function DUF2700)" /note="Predicted" /db_xref="GOA:A8X9Y0" /db_xref="InterPro:IPR024483" /db_xref="UniProtKB/TrEMBL:A8X9Y0" /protein_id="CAP29445.2" /translation="MKIGCFPVRPLLYTLAALGIFRAGFQFYWGHHHVCTAIIPLFYF AFNIFLIIAVHKREVKTLKWAQRATLAASILSVIPFLLLPVFTASFLASGEWEKWDAN DTHVHPEKYGNLTSPDFRFFIGATAGLIVEAGAAFLIAVELFKYFLITRIWRAEHDLG IHTEGFDCP" CDS complement(join(676726..676832,676884..677274)) /gene="CBG25891" /locus_tag="CBG_25891" /standard_name="CBG25891" /product="Protein CBG25891" /note="Predicted" /db_xref="GOA:B6IHP6" /db_xref="UniProtKB/TrEMBL:B6IHP6" /protein_id="CAR99402.1" /translation="MTSFKYSSYIILWFVGNAIYYHIFFSHYPCDHVRAVIPAVGVLL NIPITILMMANTPWSLSKAKDFGFYYTIFMFFVFLVAGLFLAGRISSHHFTCADNPAF CLQHKTREIFLALVHGLEVFLVFGGLIFLEILRTQIISSQFLALLRQRFNQDLERGEE ESSWI" CDS complement(join(678245..678420,678469..678655, 678700..678912,678959..679027)) /gene="Cbr-xbx-3" /locus_tag="CBG_09908" /standard_name="CBG09908" /product="Protein CBR-XBX-3" /note="C. briggsae CBR-XBX-3 protein ;" /note="Predicted" /db_xref="GOA:A8X9Y1" /db_xref="UniProtKB/TrEMBL:A8X9Y1" /protein_id="CAP29446.1" /translation="MENPTAEDIIIQKETESVAAKMELVSNHKRFLWACNLIVEVGIM MYHGMLLRIVPKYYPFMRNQFWISIGFALLNILVTLKMKKCLQGFQASVSFLHLLWIL YGFATIPVFITAITEPIAVCNHAIHSCAMVKMGAFEIKLAMGIVAQAAFVISIFGELK RLAVLIQFPYVASTELSHMDLAEQDTASVSEENGFRELSADQLEKNPNDIVIVA" CDS complement(join(680353..680591,680637..680721, 680769..681053)) /gene="CBG09909" /locus_tag="CBG_09909" /standard_name="CBG09909" /product="Protein CBG09909" /note="Predicted" /db_xref="GOA:A8X9Y2" /db_xref="UniProtKB/TrEMBL:A8X9Y2" /protein_id="CAP29447.1" /translation="MLASVLEDGDLMAPEYRSLMIVVKKFITMLFIVCLILTKLFTIT YILSSFGEDKQLIKIETHLSVFGVLFLIPICYCNFLVRGYTVFLLCAIGSLLIDTVEL ICIFTIIGSGYWIIFDLGYVALLLFILINIHNIFELKEQQQQPVEEIPLTETINTRYS SIGLNGIGIDRMTDFERAERNLQIWDEFCDEIYRHIGSTRSL" assembly_gap 683341..683678 /estimated_length=338 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(684537..684595,684643..684777, 684828..684912,684959..685243)) /gene="CBG09910" /locus_tag="CBG_09910" /standard_name="CBG09910" /product="Protein CBG09910" /note="Predicted" /db_xref="GOA:A8X9Y3" /db_xref="UniProtKB/TrEMBL:A8X9Y3" /protein_id="CAP29448.2" /translation="MLPSNSEEGDLMARELRSLKLVAKKIVTMIFIGCLILSKLFTIA YVQSNYGQGSQEACIAIYLGVTGILLLIPLYAFAGFVSGYGCFLFFACGNMVIDAAEL FLFIGIAGMGLWIVFELVYFSILLLILTCIQSFFEIEKKQPPKEETPLTVTNNSHNSS IGSTENENNMEGFSERSSSSIGSRRSI" CDS join(687312..687347,687433..687621,687666..687858, 687906..688075) /gene="CBG25892" /locus_tag="CBG_25892" /standard_name="CBG25892" /product="Protein CBG25892" /note="Predicted" /db_xref="GOA:B6IHP7" /db_xref="UniProtKB/TrEMBL:B6IHP7" /protein_id="CAR99403.1" /translation="MPLKTPFGLLQEYECKREHLRLSLWLFFLACSVMFLIRHLMFMW FLVLFCIVNAYIALGIYWGSARSLWWTHKAHIFCISLLASLWITLPYYLANYESMFHL CISPVPAHCGIHNLRQRKWLMYVYSGLYFVGIGMMVFAEACRLRMTTYLLIKAERFEG RATIAEEGMMNVNISVGTIEEQPKEKDPKDIVIVA" CDS join(689391..689567,689612..689786,689834..690009) /gene="CBG09912" /locus_tag="CBG_09912" /standard_name="CBG09912" /product="Protein CBG09912" /note="Predicted" /db_xref="GOA:A8X9Y4" /db_xref="UniProtKB/TrEMBL:A8X9Y4" /protein_id="CAP29449.2" /translation="MILWFDVHLMASFSCLILLDPSVQVRVYFIFYLALLTLPATFIV AFGNAHWMKAAFFCQLIRSLFIAFHNITYPILVASWTAVENRQAFQEASNEEIIFSSA GYGFLIFLLSTAASIFEPAKLYHICHLQRMLAEAPELADSDVEMDDVNDDTISETTDV SSFVDLGLTGKMNVV" CDS complement(join(690324..690364,690408..690548, 690884..691214)) /gene="CBG25893" /locus_tag="CBG_25893" /standard_name="CBG25893" /product="Protein CBG25893" /note="Predicted" /db_xref="GOA:B6IHP8" /db_xref="UniProtKB/TrEMBL:B6IHP8" /protein_id="CAR99404.1" /translation="MFTLFKLGLYGFCIHLTPNLLSIILFIGILHVLVLCIGFFEFYI IWFEEFPYSILEYTRLVHTMSQAKFLMVFLDGIFLQHVICPFISSRGKCILVGASWAL FELFCLSAALNSWLDKKHEIDFRILTKAWRTNQGIWNVDALTKAMIAKKKADRKKRLY VPTKQELRNY" CDS complement(join(692584..692669,692719..692878)) /gene="CBG25894" /locus_tag="CBG_25894" /standard_name="CBG25894" /product="Protein CBG25894" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHP9" /protein_id="CAR99405.1" /translation="MNLWFFTLLALISLQLAPVHSDNHVQSKCGRRALEHIQSICPTD ADGNLCLTGEFPITKYCAQGLTDSEIYDLCCPTNEHH" CDS complement(join(693577..693678,693727..693784, 693833..693894,694093..694313,695406..695535)) /gene="CBG09915" /locus_tag="CBG_09915" /standard_name="CBG09915" /product="Protein CBG09915" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9Y5" /protein_id="CAP29450.1" /translation="MKHNPAPTYMASLARNHTEYRMPTMRNLMTLIPDWKSIIAWNTY SSNWNRANNVSKFMVSRLSACNFWPEVEADRLLDRSWSAFGQKLLTAAVGRTMIGFWP EFEGAACYAARASLIINKIQVNIFNVKCLGDIATRRNQRNSWMLENSKKDKKVNQAEF LLPYSSRFTATSSKFKNINHDFLIFLYFFP" assembly_gap 695990..696506 /estimated_length=517 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(697429..697505,697562..697712)) /gene="CBG25895" /locus_tag="CBG_25895" /standard_name="CBG25895" /product="Protein CBG25895" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHK5" /protein_id="CAR99406.1" /translation="MRILLVLSFLTLFTIFPSTDAHSPRHVRSLCDRKAVHHIRRLCP DMCLTGEMLNIYEYCKMGYSDSQVKYICCPE" assembly_gap 698527..698793 /estimated_length=267 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(699076..699240,699286..699390)) /gene="CBG09917" /locus_tag="CBG_09917" /standard_name="CBG09917" /product="Protein CBG09917" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9Y6" /protein_id="CAP29451.1" /translation="MDHLLNMQNPKHFDGKGQQSPTVPSNDPESELCEVESFFKIHVL RKTDKISADKSNGQMKSIEFLLQMSRSIILTEPGANVFVITLSRC" CDS join(701165..701269,701315..701695) /gene="CBG09918" /locus_tag="CBG_09918" /standard_name="CBG09918" /product="Protein CBG09918" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9Y7" /protein_id="CAP29452.1" /translation="MDHLLNMQNPKHFDGKGQQSPTVPSNDPESELCEVESFFKIHVL RKTDKISADKSNGQMKSIEFLLQMSRSIILTEPGANVFCDYIVALMKSHNPFTKKETI VSISIEGGDHSGYFGAKFQPIEEVTIRDVIRCVLHSNNILDEKVPRATVTFMYFNSDA T" CDS join(706831..707332,707391..707503,707551..707583) /gene="Cbr-rgs-1" /locus_tag="CBG_09919" /standard_name="CBG09919" /product="Protein CBR-RGS-1" /note="C. briggsae CBR-RGS-1 protein; contains similarity to Pfam domain PF00615 Regulator of G protein signaling domain contains similarity to Interpro domain IPR000342 (Regulator of G protein signalling)" /note="Predicted" /db_xref="GOA:A8X9Y8" /db_xref="InterPro:IPR016137" /db_xref="InterPro:IPR024066" /db_xref="InterPro:IPR036305" /db_xref="UniProtKB/TrEMBL:A8X9Y8" /protein_id="CAP29453.1" /translation="MGYMGCWCSSFGRKYSGTVSPQRAVISEQVSFDMVHSWSLSFDT LMKYRTGQKYFADFLKSEYSDENILFWQACEELKRERNSEKMEEKARIIYEDFISILS PKEVSLDSKVREIVNTNMSRPTPHTFEEAQLQIYQLMARDSYPRFLTSTMYKNMRNSF GVNESATIDDEREREERAERAQRAEMGEMARLNALNASASPRENDETEIHHNYQN" CDS join(714541..714771,714960..715170,715217..715308) /gene="CBG09921" /locus_tag="CBG_09921" /standard_name="CBG09921" /product="Protein CBG09921" /note="contains similarity to Pfam domain PF10912 Protein of unknown function (DUF2700) contains similarity to Interpro domain IPR024483 (Protein of unknown function DUF2700)" /note="Predicted" /db_xref="GOA:A8X9Y9" /db_xref="InterPro:IPR024483" /db_xref="UniProtKB/TrEMBL:A8X9Y9" /protein_id="CAP29454.2" /translation="MSTQIPMDPPKLFCMPARPLVCGLALFGAIRSLIQFFIAHGITV GLSHICVLLLDLLLLFGAYKNDVFALKWSQRVTFMCVLISIARFLIYPVVFASYIASG LSRNFTGLDASDIEMISNVTSAKDNFVFGMVSGFTLEFATGLSIGVECMKYFLVHRLW EYAKATEAISSSRYVIP" CDS complement(join(715823..715967,716015..716229, 716270..716816,716867..717039)) /gene="CBG09922" /locus_tag="CBG_09922" /standard_name="CBG09922" /product="Protein CBG09922" /note="contains similarity to Pfam domain PF00646 F-box domain contains similarity to Interpro domain IPR001810 (F-box domain, cyclin-like)" /note="Predicted" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR036047" /db_xref="UniProtKB/TrEMBL:A8X9Z0" /protein_id="CAP29455.2" /translation="MSTNDNMSFIKRVQSLHILPPESMGQYLVKNRGNSPDLANLPDT VHREIFKYLKPWDLFKLSRVSTDLKNLINGNTSFTVKFHHICLDENAISMRLETSDRY LINWTFCDASRKPYWTKRFLNKCHYGKEFHIDGYYENVAQSFLFVFQNIVSIFKTDAN FKVGQLLMHPSRLDLLSRLPNDFLKNMSCEKLSIKSTKANQETDRKNSMDFAKQVLST FHLFKYLEISFSSLDGNFEYEKQFESLDSSELDDYFIENRFDDIYLNFFLKNWMFTET KSIISCRIIEKRIFNLEVILDGLDTTRWDGRNWSEIRNFYKAGAEHSFNMTREDKSYA VISISIRIGNGWNEFGILCFYSDKK" CDS join(719646..719847,720112..720204,720250..720458) /gene="CBG25896" /locus_tag="CBG_25896" /standard_name="CBG25896" /product="Protein CBG25896" /note="Predicted" /db_xref="GOA:B6IHK6" /db_xref="UniProtKB/TrEMBL:B6IHK6" /protein_id="CAR99407.1" /translation="MVYRIFVVTAFGYNNSPVVTVAFFLVHVAIFTMVLKNSSNGLTF FAKITLVIVEVVLIGDAMFSKTDGFLVFTTNAITRALGSEKGSPLNYIFCLDTIGFFI ALLTIWLQQWEKKYQASVDLIDDSKSAPRVIFAKKLTENKDGFFEESYGHLHFQMNGR TLASYSY" CDS complement(join(720976..721011,721063..721275, 721323..721334)) /gene="CBG25897" /locus_tag="CBG_25897" /standard_name="CBG25897" /product="Protein CBG25897" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHK7" /protein_id="CAR99408.1" /translation="MIAQLLLSLIANFAILVFVVNCGGKKKGAAAPGAAAGAAGGGAG GAGGPATTNSNDSKKQTPSKMDKPADKKDEDDGNYEELAVPQ" CDS complement(join(721760..722271,722315..722324)) /gene="CBG09925" /locus_tag="CBG_09925" /standard_name="CBG09925" /product="Protein CBG09925" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9Z1" /protein_id="CAP29456.1" /translation="MTNLISFIALLAIFNVSAGFDDRCHAGEVLMLLAPEDVYQKEPV VPSIVMELPELYDNVTILPSVLEVPKQVETFEYNEEDFYGDEDSEEYDGMDDDEINER SLRIAGFVGQCMVFLFVFNIVTLDIEHFDEPEEEEIVVVHKLHRAVEIQTCPLPSRQN IRIVKRLVESSEC" CDS join(722806..722811,722858..723088,723340..723357) /gene="CBG25898" /locus_tag="CBG_25898" /standard_name="CBG25898" /product="Protein CBG25898" /note="Predicted" /db_xref="GOA:B6IHK8" /db_xref="UniProtKB/TrEMBL:B6IHK8" /protein_id="CAR99409.1" /translation="MPYFQAVQFFHLLNIFFFSVLVLIGCEKKKPKSAESNASKNPLG PSNRNPGPASSHMYVDATTTKSIAYTQPYTKPVVTYHIKK" CDS join(725102..725153,725788..726818,726844..726873, 726928..727035) /gene="Cbr-pqn-8" /locus_tag="CBG_09927" /standard_name="CBG09927" /product="Protein CBR-PQN-8" /note="C. briggsae CBR-PQN-8 protein ;" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9Z2" /protein_id="CAP29457.2" /translation="MGSSATTPQYNAYAGGAGCPSSGCIPPTIVPKTSGFWPNADLLT GLQIEQNQQNTNQNQNQNQNQNPNINSPQQDAPNNGQNQPLFPGISSSTPQPVIYIAR AGSDQYRYSGSSNTQSPIGIGNGLGIGNNWNNGGIGFQNQMNQFSGNQNSNQNWNQNG NQNPFQPNQNQNQNSNFGNAGFFNNQNQNSQNSQNQQQGSQNSLGSSGFINNQNQNPS SGSSSGFFNNQNNNQNTQQGNTGSQGSQNPFASGNSQASGFIQGGQQNNNPFGNQNQG SSNLPFGPNMMPNSNTQMGPQPFQPNQVGSIRQSPQFPEKDWNFQPGSQSVHFVGGNG AGNGGVSHKKLEFIFLYLSKISVDFRREAQQIAVQIQAIRENLSITRDESNYLISQLK ASLPQEIQSQLQMF" CDS complement(join(727188..727329,727546..727626, 727676..727848,727896..728270,728316..728474)) /gene="CBG09928" /locus_tag="CBG_09928" /standard_name="CBG09928" /product="Protein CBG09928" /note="Predicted" /db_xref="GOA:A8X9Z3" /db_xref="InterPro:IPR040426" /db_xref="UniProtKB/TrEMBL:A8X9Z3" /protein_id="CAP29458.2" /translation="MVNRIFFCCILFAHVVDSTIQNHKPFWLSADIDSIEWQEGCLTT VLCSHPRFQLLKDLLPISERVSISWPVTEQFLEHTVAPFISYWPTGRIEDVSLSAQVI GVDTTYGFPRTCDQTPAVRIFPVDLYELNPENAENKTIHLKAKCFETTITVTKHIERC PWCPDPREVLISNEIPQQINLQQSALESGIHSFVGMFYKSSTSESLQVGICLLAALAF FACLAFSIMLVVYLKSTKPSRRNVSVNVQPRLIPCNRRCDDYDTRYDMPWDQQRPLTY WMSKSTVTSPTSMRSDAYQTYRIPPPPNFSPPV" CDS join(734270..734401,734592..734637,734685..734848) /gene="CBG09929" /locus_tag="CBG_09929" /standard_name="CBG09929" /product="Protein CBG09929" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X9Z4" /protein_id="CAP29459.2" /translation="MKIIQLFLLLTIFSGLVVSLTSNSNRNKNRFSGSPFFHGMYKKF MSIAPSFSMSTLPIYLLRAQHLMNLLTKDMENLKPESESMNDSFEVFKQGLAAVVSNI PAKVMRCIQPE" CDS join(738251..738351,738401..738801,739090..739136, 739177..739287,740163..740390) /gene="CBG09931" /locus_tag="CBG_09931" /standard_name="CBG09931" /product="Protein CBG09931" /note="contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domain IPR001304 (C-type lectin)" /note="Predicted" /db_xref="GOA:A8X9Z5" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:A8X9Z5" /protein_id="CAP29460.1" /translation="MFAKTLPLLLFSLLFLQIDAQCGTGAIYVQQMNKCLQFYSSAVN YATAESVCSTLNGHMVSVHNMNENTYLAQQASQLIYKNGPVWLGAKTMSSIVTDPTSW KWEDGSPFDFQNYKIGQPSSLGTSACMQFFANDGQWLTATCTDSSPFICASDPPLSST TACPPSQAISNTGIKVDYTKNLNIWIGLYYSDGYWKWIDGTPADYANWASREPNNVTY GMSHKIVFLISPPSGVKWVPSQFLASFSSSPMCAPDKANNSSGNRKNIDRKSSVDEVV GKGKRKDDSCCQKKNRIPL" tRNA 744164..744234 /gene="CBG28920" /locus_tag="CBG_28920" /standard_name="CBG28920" /product="RNA transcript CBG28920" /note="C. briggsae predicted tRNA" CDS 753528..753749 /gene="CBG25899" /locus_tag="CBG_25899" /standard_name="CBG25899" /product="Protein CBG25899" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHK9" /protein_id="CAR99410.1" /translation="MYAFFLKPQMLSFPPFYPILSHFQIFNNSFFFFSRFFNPSSSFP QKFNRSESLHISCREHTVYPVSEQDLSVK" CDS join(758490..758708,759076..759231,759363..759793, 759876..760242) /gene="CBG09935" /locus_tag="CBG_09935" /standard_name="CBG09935" /product="Protein CBG09935" /note="Predicted" /db_xref="GOA:A8X9Z6" /db_xref="InterPro:IPR040426" /db_xref="UniProtKB/TrEMBL:A8X9Z6" /protein_id="CAP29461.1" /translation="MRSPLLLILFLDLLRYSSANQFWLSAEVEQIDWTDGCLTTALCS HPRFQLIKDLLPVNEKVTMNWPIVEHFDKESHRPFVSYWPSGRTEDISMSAQVVGTDR TYGFPRICDQSPSVRIFPEEHKKILAHLEKEKTTGKPPMDSLKIKVKGKCFNATMTVM KHTERCPWCPDPKEITIIGQEPGSEATGMRAGSAAWLFGSSSSLISDDRIVHIGVLVL AVVAVLASTAFAVILVMYLRNKRLVKETLKKPRFHPYISVKGHEIAEDNNRYDLPWEQ QQRPLTYWMTSSNKSSESTMTSPLDSASSLHGSGSHQNPNIFNSQHHHQNPHPEMYHS TYTRDGYQTYRPPPPSVHPPIFPPQTQLFHPPTYSTQRHVTSPNSSRHDDSGLESV" CDS complement(join(763926..764119,764179..764322, 764425..764541,764627..764689,764863..765827, 765872..765995,766046..766148,766194..766950, 766995..767209)) /gene="Cbr-alx-1" /locus_tag="CBG_09936" /standard_name="CBG09936a" /product="Protein CBR-ALX-1, isoform a" /note="C. briggsae CBR-ALX-1 protein; contains similarity to Pfam domain PF03097 BRO1-like domain contains similarity to Interpro domain IPR004328 (BRO1 domain)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:H8WHA2" /db_xref="InterPro:IPR004328" /db_xref="InterPro:IPR025304" /db_xref="InterPro:IPR038499" /db_xref="UniProtKB/TrEMBL:H8WHA2" /protein_id="CCG58614.1" /translation="MAAFGFISAPLKSTNEVDLVKPLTTYIDSVYNTSEDNRSDITEA VQELNKLRSKACCQPLDKHQSALDVLTRYYDQLVAIESKIIISATQNPVIFKWKDAFD KGSLFSSRASLSLSDGSFERAAVLFNIGSLMSQIAAAQQFHTDDEIKISAKLFQQSAG VFARLRDVVLGMVQQEPTPDLMPDTLAALSALMVAQAQEAIYIKGHKDKMKAVSMVKI SAQVAEFYADAQKMMTKDVVRGLWDKEWSSIVNGKTIAYQALAQFHQSEVNGESRQIG EQLSRLAESLKLFETAQKYLPKDITGIWDIYPTVSKAHTAAKKDNDFIYHERVADFRS LPALQKAVLAKPTPVPNPITPNFRDMFSSLVPVQVHNAMQSYDARKAELVNMETVRMR EATQLMNGVLASLNLPAALDDVTSTETLPESIKMKSAKLKQNGGSAEIMRLFNELPTL YQRNEDILTETSRILNEEKESDDNMRKQLGTKWSRMSSDQLTGPLVTEIGKYRGILHT ASNADKMVREKFEAHRQGIELLSKNETELRSSIPGQTAHATGETDTVRRLRQLMTEWS EVTTDRELLEKELKNTNCDIANDFLKALAENQLINEEHISKEKIAQLFGDLKRRVQVS LDKQETLINEIQSSNNKFTGEKTGSSTGAERERILKMLAQASDAYAELKANLEEGTKF YNDLTPILVRLQQKVSDFAFARQTEKEDLMRQLQLSIVSAQTAKAVVDGVNNLVSSYF TSGTSTAPSPANAPPRPPPPRPAAPSVESPIPPPRTQQAMQATPGAPQQQATYNPYQQ QPQMQQFQQHPGYYQQQVPYGVFLCFMTLLTRQPQPQMMFQPQYQPTFAAPYPTFPGA FPSYQQQQWPQQQQQGGFPPNPQFGQQNQQGGTNPFQ" CDS complement(join(763926..764119,764179..764322, 764425..764541,764863..765827,765872..765995, 766046..766148,766194..766950,766995..767209)) /gene="Cbr-alx-1" /locus_tag="CBG_09936" /standard_name="CBG09936b" /product="Protein CBR-ALX-1, isoform b" /note="C. briggsae CBR-ALX-1 protein; contains similarity to Pfam domain PF03097 BRO1-like domain contains similarity to Interpro domain IPR004328 (BRO1 domain)" /note="Partially confirmed by transcript evidence" /db_xref="InterPro:IPR004328" /db_xref="InterPro:IPR025304" /db_xref="InterPro:IPR038499" /db_xref="UniProtKB/TrEMBL:H8WHA3" /protein_id="CCG58615.1" /translation="MAAFGFISAPLKSTNEVDLVKPLTTYIDSVYNTSEDNRSDITEA VQELNKLRSKACCQPLDKHQSALDVLTRYYDQLVAIESKIIISATQNPVIFKWKDAFD KGSLFSSRASLSLSDGSFERAAVLFNIGSLMSQIAAAQQFHTDDEIKISAKLFQQSAG VFARLRDVVLGMVQQEPTPDLMPDTLAALSALMVAQAQEAIYIKGHKDKMKAVSMVKI SAQVAEFYADAQKMMTKDVVRGLWDKEWSSIVNGKTIAYQALAQFHQSEVNGESRQIG EQLSRLAESLKLFETAQKYLPKDITGIWDIYPTVSKAHTAAKKDNDFIYHERVADFRS LPALQKAVLAKPTPVPNPITPNFRDMFSSLVPVQVHNAMQSYDARKAELVNMETVRMR EATQLMNGVLASLNLPAALDDVTSTETLPESIKMKSAKLKQNGGSAEIMRLFNELPTL YQRNEDILTETSRILNEEKESDDNMRKQLGTKWSRMSSDQLTGPLVTEIGKYRGILHT ASNADKMVREKFEAHRQGIELLSKNETELRSSIPGQTAHATGETDTVRRLRQLMTEWS EVTTDRELLEKELKNTNCDIANDFLKALAENQLINEEHISKEKIAQLFGDLKRRVQVS LDKQETLINEIQSSNNKFTGEKTGSSTGAERERILKMLAQASDAYAELKANLEEGTKF YNDLTPILVRLQQKVSDFAFARQTEKEDLMRQLQLSIVSGTSTAPSPANAPPRPPPPR PAAPSVESPIPPPRTQQAMQATPGAPQQQATYNPYQQQPQMQQFQQHPGYYQQQVPYG VFLCFMTLLTRQPQPQMMFQPQYQPTFAAPYPTFPGAFPSYQQQQWPQQQQQGGFPPN PQFGQQNQQGGTNPFQ" CDS join(768088..768209,768260..768373,768418..768695, 768712..770683,770730..770901,770950..771264) /gene="Cbr-mog-1" /locus_tag="CBG_09937" /standard_name="CBG09937" /product="Protein CBR-MOG-1" /note="C. briggsae CBR-MOG-1 protein; contains similarity to Pfam domains PF00270 (DEAD/DEAH box helicase) , PF00271 (Helicase conserved C-terminal domain) , PF04408 (Helicase associated domain (HA2)) , PF07717 (Oligonucleotide/oligosaccharide-binding (OB)-fold) contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR002464 (DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site), IPR007502 (Helicase-associated domain), IPR011709 (Domain of unknown function DUF1605), IPR014001 (DEAD-like helicase), IPR001650 (Helicase, C-terminal)" /note="Predicted" /db_xref="GOA:A8X9Z8" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR002464" /db_xref="InterPro:IPR007502" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR011709" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8X9Z8" /protein_id="CAP29463.2" /translation="MSKKQADDRLEGSNDTFGGLVIKKKKVEGDDSKQPAASSGKSLL GLDKLASTKREYARKRLEDDDDRGVTESVRKGIEMVHEKHRDRDDRGMKYKSKDDDRK RDRDRDRNHHYDRSDRSDRRNDSSRRDWKDRRGDETPRFKVPETPSRMSWDQDEGSTR KKNSWDKPTRRDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRREMEDRKKAQ DKHWELAGSKLGNLMGVKEKPDETANPEDDDSGNYKESHQFASHMKDNEAVSDFAMEK TIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGEAGLIG CTQPRRVAAMSVARRVADEMGVELGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLG DGTLDQYSAIIMDEAHERSLNTDVLFGLLREVVAKRSDLKLIVTSATMDADKFADFFG GNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGAMDGDILIFMPGQEDIE CTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSL TVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYT ERQFKDELLVSVFFNFFIYFNFFQRSTVPEIQRTNLANVVLLLKSLNVDDLLKFHFMD APPQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIVSAEMGCSDEV LTIVSMLSVPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVYLQWREHKYSAKWCA DNYLHVKALKKVREVRAQLKEIMQDLKLPIVSNGNEWDIVRKCICSAYFHNAARLKGI GEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELG PMFYSIKESKQSRREQKMESVRTVETMEAEMREAQKEMERRKEESDKAFKRPESSRRV VEVGAKSVRSERRKLWGL" assembly_gap 768718..768814 /estimated_length=97 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(771511..771781,771827..772122,772170..772493) /gene="CBG09938" /locus_tag="CBG_09938" /standard_name="CBG09938" /product="Protein CBG09938" /note="Predicted" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR032675" /db_xref="UniProtKB/TrEMBL:A8X9Z9" /protein_id="CAP29464.1" /translation="MKLDNMPIELVHEIMKWVRPTDILSSALSCVELASVVVNLLPKI HDMKIKISNGQLSGGLNRDTVNLQIPQIDDEETKEILNLLMPHLGEDIDSLRLENDMV TGEISDEQLARVLHSTKDAPLKTLNLSEVDLERIHTWTLALIAGFNQLEKVEIEQCRL GGDTEAKLLRCLQSSFQTLSQIDLKGTPQITDNFSRRISRSCPNLAYFRISDCPLVTT LSALPFIESTAFRRNDQLDVHMDNTGFDADQLSTFMRSPLFGSSSEEWCLKPVQIPLG FTKSAVLALHASRKCVFIFA" CDS join(772847..773062,773114..773235,773277..773418, 773464..773597,773641..773783,774049..774128) /gene="CBG25900" /locus_tag="CBG_25900" /standard_name="CBG25900" /product="Protein CBG25900" /note="contains similarity to Pfam domain PF07959 L-fucokinase contains similarity to Interpro domain IPR012887 (L-fucokinase)" /note="Predicted" /db_xref="GOA:B6IHL0" /db_xref="InterPro:IPR012887" /db_xref="UniProtKB/TrEMBL:B6IHL0" /protein_id="CAR99411.1" /translation="MWQKLILTAGSDSQNDIFKKQLSLISTEKYCEAVEVVTDESPGI RIGSGGATLSIIRRIFDEQKYKDLEGTKILLLHSGGLSQRMPHLSAYGKAFGTLTNNS TILETKLEIYKNDLIGKLPQTGGIMITASDVIEKMSSMKSVKSSEADIVIFGHLSSLE VGTQHGVFVMDEKSGQLKCVLQKASEEEMKIEGAIREDGMVVTDSCYFMSWKFCKRLL KNPLFKTPITEELCCYGDFMRPMGYAPKLDYLQNSSPKLKLYRKALTEVFIDPNVEVS QL" CDS complement(join(774814..774821,774874..775166, 775319..775368)) /gene="CBG09939" /locus_tag="CBG_09939" /standard_name="CBG09939" /product="Protein CBG09939" /note="Predicted" /db_xref="InterPro:IPR038832" /db_xref="UniProtKB/TrEMBL:A8XA00" /protein_id="CAP29465.2" /translation="MYGSLIARPVRRIGRKRMGHTFSSAAESQKTPASTPQRTTKAPV CVDPRSPSQDIERTPIQFNSSSGTTKVNQLANERSDDSENSSKNEEKPAKQSLRQKMF ARMKNNSQDVVSED" CDS complement(join(776229..776724,776769..777550, 777668..778758,778872..779344,779392..779465)) /gene="Cbr-bub-1" /locus_tag="CBG_09940" /standard_name="CBG09940" /product="Protein CBR-BUB-1" /note="C. briggsae CBR-BUB-1 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR015661 (Mitotic checkpoint serine/threonine protein kinase, Bub1), IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain)" /note="Predicted" /db_xref="GOA:A8XA01" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR015661" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/TrEMBL:A8XA01" /protein_id="CAP29466.2" /translation="MTQIDQAFRDLEYNPTADALGTFTTQLETLSKMLPFPDMKAGLM DCLRKIRRDRRFDAVRNDETMLRLYKILGQYSENLGMKGIYLQLHTTGNFSKSLNLYL QWAEELAKKQDLTEFTKVLDMARKALDKTLTMPEIESGFRDMADEYFPDGRAAALFAS PDDTLDVFRDNAPGRRMKRRSSAKTKLRSEFIDVPGTFGVSIEEFRYAKWKDTFGEDV DPHRRDSGIVQAKHQVAANDRCAREEVENRIASNLKRRPPLSPLSEANADDEDEKRSR IYSPLVPTKDATRPALRNSKTFQDNIPTITLSSDTKSASSKEISYNQLDDSDTEEKLK TMAAGREKARTSSLSSSTSSSTRTAKSGGLDLMAENNCLEAHAMFSETVHIGGPEKTM VISDETMSIKPTEVSSNFSVLCDPDPTMNLTHDRPKKTSGGLNMVFDELALVEESIGE AVEVKTVSKIKKDLEDTRLGKSLRTPPTLGDEDDSEFKQKRTNISINRYIPVFDDELI HGHGFGKITHGSIVTSTPAAGVAFVDIESYFGNKWRLIMRRKSQAAAAQAQVAPPAPP PPAPKQVPAANSSIDCLSDNLGRRLSLGADEIRAAIVAGEAETTGILNRRRSEIIRKG DINPWDETLRRRLMATVRAPINMHEFQERAPKIQANRDCEVGGEVFHIQTLIGQGGYA KVYKAVNEEKKVVAVKYEVPSCSWEVYICDQMRNRLIKDREDRVKMADWCIMKVMDAY VFSTASLLVNEYHEYGTLLEYANSMKDPNWHISCFLLTQMARILKEVHACNIIHGDIK PDNFMITRKIDPNWDKDALMSNDTFVVKIIDWGRAIDMMQLKDQTFKGRAGTEDFDSP EMIDGRPWNYQADYFGFAATMAVVVTAKYGKLTGSKVGEYSLSCDIKRRNALRNTIFD IIKKFLNIESVNTLPDWSEAIQQFADFWETNFDGSSWRQAIAKFNEVCDLAATNHKQ" CDS complement(join(780522..780750,780798..781164, 781214..781507,781559..781906,782240..782419, 782712..782938,783175..783957,784609..785066, 785149..785503,785550..785653,785837..785899, 785947..786234,786400..786501,786892..787326, 787372..787503)) /gene="CBG09941" /locus_tag="CBG_09941" /standard_name="CBG09941" /product="Protein CBG09941" /note="contains similarity to Pfam domains PF06119 (Nidogen-like) , PF03782 (AMOP domain) , PF00094 (von Willebrand factor type D domain) , PF00084 (Sushi domain (SCR repeat)) contains similarity to Interpro domains IPR005533 (AMOP), IPR000436 (Sushi/SCR/CCP), IPR003886 (Nidogen, extracellular domain), IPR001846 (von Willebrand factor, type D domain)" /note="Predicted" /db_xref="GOA:A8XA02" /db_xref="InterPro:IPR000436" /db_xref="InterPro:IPR001846" /db_xref="InterPro:IPR003886" /db_xref="InterPro:IPR005533" /db_xref="InterPro:IPR035976" /db_xref="UniProtKB/TrEMBL:A8XA02" /protein_id="CAP29467.2" /translation="MWTARHAIALLVVLTYAYSNILPPGTTFSQSIKDIFRFQDSKKV QDIEDVMCSEDPPESRIPTREELLELIRKSEQEDHKYDEHVRKKRQTSRITYQEYLDN LGKADYDVRIEEGWTEILYPFGTWAMDKQLMGQAGRETQTNLGFDCPFYGFRFNYTMV YPMGMISFGLPPFSAPPWTFPNPSWPKQRDHSFIAPFYADAMFQWIGNTKISNVFFRS VHRPRLDDDEIYERNSQLNYGAPNYAQAGAQSDANQQYANPSLYSQNLNPYSQNQQYN TQLLQQQQQIYGKRKKRQMPGRVSQPGMVVDPLLLDNITRHIQDGYTGANGFRAEHAF IATWYRMAHGGAARALDVSQFEHVKDWQNTFQLVLASDEIRTFAIFNYARLNWTSSNE AGGLDGFGGKQAAMAGFNGGNGTGWYGMPYSGEGRLWKLGYFSNVLTPGRWIHRIDEL IIPAGCTNASNGAMMTAPPWGPMHGGMAINVSGPCLRPADVVKELNLWERGLSVRRRY RLSHACRQRKSNRPIAYIKARMTALRRVTSSVLHRHGRMHTLTPKNLRKICCPPPLRR FQFVFQVNFENWQTSCVRLNRVRARCIMPMFHKIGIVPIRMSRDGGQSFPFFGRFYVV NSERAPAYVSLKDSVDNKTNRWYEPYAQELAMTWQAMNLTWNSGARVDISLFGYWEDA DRSHFERLDYLARGIANTGTYSFRPQQLTKQFLLRDAWQKFHFGFVQVALADTEDGVM WSKPTPFPWYHLNEWEHYYGQNWPIDMCVEWFEYDGKRNNFQIDLTTDFPCPCKLSQA LLDLGRFMPLMDCDKDGDTSCPFNKGAQHCIQSVQPTFSGSSQQCCYDYEGYLMFTDD WEPDGDYTTFFQPGTPARAHRYGAAPYRLPPFIPTLSNYQLDLLPYRTCCKYADHCEF YYWRRMTNGCQDYRAPAAGYMYGEPHVITYDGIRYTMPGKGYYVLTMSDSPYHKLMVQ VRLEQPDDTLWHAHVNATVITAVAVQENDSSIVQVYARKPMRRWRYRTDVYVDGSRRF FDKPHWKHQQFKHLDIRNPLQNMNQSELVIMLKSGVGIRIFEGFGMLDVMVTLPPSYN TTCRQGESMSSALNSPLGQRRCYTTLGLLGVYDNDPANDLTTPTGAVTRVSNPTTTAS TTQMIYEQFASTWKIDGTNEKLGGLLFQDKYKPLYNPLLFAEADYRPVYWPQTIDMNA SRVFTMEEVVSTCQNNPECEYDYLLTGRKEIALTTLRRQKQFIALQKTGSKQLISCGP LLKKEGVVKTPPAANYLDGDKVVFSCKPKYYIHGDIERVCRNGTWSPGWWAWCRDRNL EYALKWMTALLSIFGISLIFVIFFCILWNIRKKKQAAHAERLQLKDEEENLKKLEHDR ILANIPEKTPLIENDFRSNYNISQTSRPLSQPASTHYTPPSFVAPPAPTYEAATSSRN QYEPTIRNMNMPFQTSQF" CDS join(<787549..787801,787848..788877,789252..789296, 789341..789398) /codon_start=1 /gene="CBG09942" /locus_tag="CBG_09942" /standard_name="CBG09942" /product="Protein CBG09942" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XA03" /protein_id="CAP29468.1" /translation="KRREEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEGNCCFWSH NTREKDNLLSIERVVSFLSRAVDLMPSIMNKNKETRIRYLKLLELQNPYKKIAKQFGS QIFLIFRIHKI" assembly_gap 787801..788501 /estimated_length=701 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(790614..790775,791402..791559, 791608..791677,791729..791809)) /gene="Cbr-ttr-1" /locus_tag="CBG_09943" /standard_name="CBG09943" /product="Protein CBR-TTR-1" /note="C. briggsae CBR-TTR-1 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)" /note="Predicted" /db_xref="GOA:A8XA04" /db_xref="InterPro:IPR001534" /db_xref="InterPro:IPR038479" /db_xref="UniProtKB/TrEMBL:A8XA04" /protein_id="CAP29469.1" /translation="MFILFLLLTITISTSDGGKLGRLQSVAVSGQLKCEGKPAAGLRV DLMESDNNVEESGIIDDDDFINYFITDESGNFNVSGSEVEISGIEPYVNIFHKCDDGL SPCQRVLRINIPKSATVWGETSSELFSIGTFELAGKVVGERRSCAYRNLTTDSF" CDS complement(join(792903..793040,793268..793422, 793469..793622)) /gene="Cbr-ttr-2" /locus_tag="CBG_09944" /standard_name="CBG09944" /product="Protein CBR-TTR-2" /note="C. briggsae CBR-TTR-2 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)" /note="Predicted" /db_xref="GOA:A8XA05" /db_xref="InterPro:IPR001534" /db_xref="InterPro:IPR038479" /db_xref="UniProtKB/TrEMBL:A8XA05" /protein_id="CAP29470.1" /translation="MAKFVFLSLLLVGSVASLDLIGRTQSAAVKGKLVCEGKPASGVK VKLMESDNSVGIGFLDSDDKMASGKADSSGGFNLSGSTKELTGIEPYLAVFHDCKDGI TPCQRVFRVNIPKSYTNSGSSAKKTYDAGVIELSGKYPGESRSCLN" CDS join(795486..795569,795617..795686,795730..795884, 795929..796069) /gene="Cbr-ttr-3" /locus_tag="CBG_09945" /standard_name="CBG09945" /product="Protein CBR-TTR-3" /note="C. briggsae CBR-TTR-3 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)" /note="Predicted" /db_xref="GOA:A8XA06" /db_xref="InterPro:IPR001534" /db_xref="InterPro:IPR038479" /db_xref="UniProtKB/TrEMBL:A8XA06" /protein_id="CAP29471.1" /translation="MRLLILSIALFIGSTTALDLIGRTQWAAVKGKVLCEGKPASGVK VKLMESDNSFLPGFLDKDDKLASSKADSNGEFNLSGSTKEITTIEPYLAVFHDCKDGI TPCQRVLRIDIPKSYSNWGSSAKQTYDAGVLELAGKFKGETRSCFNK" CDS complement(join(796130..796261,796318..796870, 797352..797362)) /gene="CBG25901" /locus_tag="CBG_25901" /standard_name="CBG25901" /product="Protein CBG25901" /note="Predicted" /db_xref="GOA:B6IHL1" /db_xref="UniProtKB/TrEMBL:B6IHL1" /protein_id="CAR99412.1" /translation="MSLDHPDDQYYFLSVADTYINLGEIQAASAPQSSDTQGSTAPVS APGSSPASIPPSAPSSGPAPALDPTQGPGSTPQASSLPNSAPPPPAPTAPIFIPPPVP PENAVAALTAATPPKEEAAVPVSVKPVAAPALKLFEDVNLDSDAKSAQNGVKSKKSKG SVSDARKNKRKGSSEDSGEYKKPKQLYFARGCYCFCFFLFLGLLIVWGLVAAVALNYL HIEFFEKLITNFG" CDS join(797578..797724,797772..797897) /gene="CBG09947" /locus_tag="CBG_09947" /standard_name="CBG09947" /product="Protein CBG09947" /note="Predicted" /db_xref="GOA:A8XA07" /db_xref="UniProtKB/TrEMBL:A8XA07" /protein_id="CAP29472.2" /translation="MVLKGHKNLISTNFRSTVSIVKKSKATDVSTSTAPTSEKEDKKP GNATVIRIIIGVTNLIFLIILIFWGLALCTGLHIADVAFINNMFMG" CDS join(799618..799654,799704..800146,800261..800383, 800426..800508,800561..800669,801983..802087, 804517..804592,804938..805040,805110..805275, 805319..805479,805528..805663,805715..806120, 806243..806717,806769..807873) /gene="Cbr-cyld-1" /locus_tag="CBG_09948" /standard_name="CBG09948" /product="Protein CBR-CYLD-1" /note="C. briggsae CBR-CYLD-1 protein; contains similarity to Pfam domain PF01302 CAP-Gly domain contains similarity to Interpro domains IPR000938 (CAP Gly-rich domain), IPR001593 (Ribosomal protein S3Ae)" /note="Predicted" /db_xref="GOA:A8XA08" /db_xref="InterPro:IPR000938" /db_xref="InterPro:IPR001394" /db_xref="InterPro:IPR017896" /db_xref="InterPro:IPR028889" /db_xref="InterPro:IPR036859" /db_xref="InterPro:IPR038765" /db_xref="UniProtKB/TrEMBL:A8XA08" /protein_id="CAP29473.2" /translation="MPGEFESVPELSAGSHQFRNLLDDFMGPTQLRNSFNDLNNHGFE FLGQSNTNSSSSSNVRYTNSKNRESYLVSRFTKIIASSLLFQDQNIPVGNLLDGFDFI EKPSVPYKETLVDVSDSRTKLDRDLNEEGLIVALLQRKINGLYFKKSHEEYEEPRVFE IPAGTMVREMADDDWKIPELNEWYSKNRLNRIQERIATPMEIQELDCNPRICSMVTRT DVMRISQDQAIHLLSVKPENRLELYHNIERFNFIVNLRVGNRVEVDVDDTMRRVPAKV SWIGERQQEPGIWYNVDFDTNASQWPSNSYSSHDRLNRHFDTNWNLDMSGSSSVAASN SRLYYSPNQMHMPMKGGGVSALYDNRRLVHYNGAEESYRNSAYPKPPPSQERIIPVTR QQAEFERPSRAMRPPEPDYNTYSNHHHPLPPAPPVAPRTSHSSSLNSYVGQPSRSKSV HTMQRNLYHRQHIAEQNEPVESDQLGFRVEDQCIWNNNGVEERGIIKFIGFLKGHKTL YAGVEFKNQIGAGTGVFNKEQLFHSKDGHAGFVELSTLESTSSTSSSSSSSAQHRRRL SSSRSQQMPAASGTSISVPVNVRHNINGKQASSESLSDPPPPPYAPPSPPRASSAAAA HQQPPPLPPKPIAHVEDYLIESYDIGSHVVVAHLGAQRNGVVRWLGNEVDEQGERLVR SAIVQLDDDVPTAWRRSNEAITYCGSPVTGGVLVPVQALRHNRAASSSSGHSVPMSSN YPTSHNTINRRTEEFGSMDSGVEKHHCGPAKDIQQLVGRQKGIQGYCNSCYLDATLYA MFVQSTFFDFLLEKSIKGNEKASQFQKILAQEIVFPLRKVHYVRADHVMKLRKLLAEL MPHVTGLTNEEKDPEEILGFIFSEIFHAEPFIKLIGQNRAKDSQYLVPIVVDDWQGGA ATSQHLLERHMRSAQVTFAKSPPVLIMQLPRYGQQKVFDKILPLETIDITPFVAGAVP ACTSCGACSEVYCPTCFLTRRVFYSEIIFCRKCFHHSHLLPEIQDHQSRDLFPPAKPV KKPHSHKMVLSAVLCIETSHYVAYVRSSTNQWIFFDSMADREGLSDGFNVPVARECGN MSDWLSLQGWNRLKDADETGQIKVIGVFFLFSQVIIDFFQAMFGKAALDPLVGRLLSD SYICFYEDASATCPSSSSNLISTFKNMMN" CDS complement(join(808394..808498,808546..808689, 808734..808837,809100..809322,809367..809606, 810089..810293,810477..810588,810633..810818, 810870..811013,811323..811394,811441..811498)) /gene="Cbr-mam-7" /locus_tag="CBG_09949" /standard_name="CBG09949" /product="Protein CBR-MAM-7" /note="C. briggsae CBR-MAM-7 protein; contains similarity to Pfam domain PF00629 MAM domain contains similarity to Interpro domains IPR010916 (TonB box, conserved site), IPR000998 (MAM domain)" /note="Predicted" /db_xref="InterPro:IPR013320" /db_xref="UniProtKB/TrEMBL:A8XA09" /protein_id="CAP29474.1" /translation="MNRDVFFSSVCFLVSIFKTDSCTPFGRESLLVSPTMLGVSSSSG TEPGISRPAVTNNNLFPQQSSVRARGEKNTHFGIPNGVAKSNKEMSVSLGVASSPSIM DASELNCSEFDESCRWRNVDGMFVDELDWYQGSGELDQTRLAVATATNVLPEGQYAIA ATDMVQFPTIKAVLVSDPISCQVGDGEIRFIQAIEKNDPGPVFVNIPEQGAVPFQIYI IADHFTFNSENLKGGFAIIDSIEYYARMCNSDEKKSFDYSSNGSDSIPLIPLAESKDD FQEESSHVTVKRESDDSSFETLHAFGAVPEMNFQLGIPRGSGERTGIVDFSSKPDEGL MRNSMIKIRRPASQETNDVNDEISDPSVSTVCEAIVCSFNESEACSNMALQSDWSIGN GPVGNPLTGVKGDASSLPFNENGSYAYIHGPQIKSRLQTPSFNVDKAVTIVFSYYKAG KASHFQAVIKKENSEEIVTYQAPKLIRNSRRWFRESLNISAGRYDYIAFEVSNLRPNH YVGIDEMFVVDDRRKSFCFHRH" CDS join(812764..812815,813380..813570,813616..813788, 813834..815506,815554..815941,815988..816485, 816530..816785) /gene="Cbr-tag-76" /locus_tag="CBG_09950" /standard_name="CBG09950" /product="Protein CBR-TAG-76" /note="C. briggsae CBR-TAG-76 protein; contains similarity to Pfam domains PF02170 (PAZ domain) , PF08699 (Domain of unknown function (DUF1785)) , PF02171 (Piwi domain) contains similarity to Interpro domains IPR014811 (Domain of unknown function DUF1785), IPR003165 (Stem cell self-renewal protein Piwi), IPR003100 (Argonaute/Dicer protein, PAZ)" /note="Predicted" /db_xref="GOA:A8XA10" /db_xref="InterPro:IPR003100" /db_xref="InterPro:IPR003165" /db_xref="InterPro:IPR012337" /db_xref="InterPro:IPR014811" /db_xref="InterPro:IPR032472" /db_xref="InterPro:IPR032473" /db_xref="InterPro:IPR032474" /db_xref="InterPro:IPR036085" /db_xref="InterPro:IPR036397" /db_xref="UniProtKB/TrEMBL:A8XA10" /protein_id="CAP29475.2" /translation="MSRRNATSFVDNTLTSSEYAPVTGISGSGSMSPPITSRPASGQA SPLSTNGSLSPPAYADENGSVVYNADSPRDLSPLLLSELACLNMREVVARPGLGTIGR QIPVKSNFFAVDLKNPKMVVIQYHVEVHHPGCRKLDKDEMRIIFWKAVSDHPQIFHNK YALAYDGAHQLYTVSRLEFSEATVRLDCEASLPKDNRDRTRCAISIQNVGPVLLEMQR TRTNNLDGRVLTPIQILDIICRQSLTCPLLKNSANFYTWKSSCYRIPTAAGQALDLEG GKEMWTGFFSSAHIASNFRPLLNIDVAHTAFYKTRITVLQFMCDVLNERTSKPNRNNQ RGPGGPGGPGGYRGGRGGARGGGYNNFGNRGGPPTNPRDDFGGNGLTFTMDTLSRDTQ LSSFESRIFGDSIRGMKIRATHRPNAIRVYKVNSLQLPADKLMFQGVDEHGTNVVCSV ADYFSEKYGPLKFPKLPCLHVGPPTRNIFLPMEHCLIDSPQKYNKKMTEKQTSAIIKV TKNLFLEKRLSYLNNVNFRAAAVDATQREERIKQLAAQASFSSDPFLREFGVAVSSQM IETTARVIQPPPIMFGGNNRSVNPVVFPKDGSWSMDHQTLYMPATCRSYSMIALVDPR DQSNLQTFCQSLTMKATAMGMNFPRWPDLVKYGRTKEDVCTLFTEIADEYRVTSTVCD CIIVVLQAKNSDIYMTVKEQSDIVHGIMSQCVLMKNVSRPTPATCANIVLKLNMKMGG INSRIVADQITNKYLVDQPTMVVGIDVTHPTQAEMRMNMPSVAAIVANVDLLPQSYGA NVKVQKKCRESVVYLLDAIRERIITFYRHTKQKPARIIVYRDGVSEGQFSEVLREEIQ SIRTACLAIAEDFRPPITYIVVQKRHHARIFCKFPNDMVGKAKNVPPGTTVDTGIVSP EGFDFYLCSHYGVQGTSRPARYHVLLDECKFTADEIQNITYGMCHTYGRCTRSVSIPT PVYYADLVATRARCHVKRKLGLADNVDCDTNSMSSSLASLLNVRSGSGKGKKSHGSTV DDETFSIPDGFPIKFSRIASLLLETSRVVCTSSEDPQNYPNRVCVA" CDS complement(join(821442..821657,821704..821952)) /gene="CBG09951" /locus_tag="CBG_09951" /standard_name="CBG09951" /product="Protein CBG09951" /note="contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domain IPR000535 (Major sperm protein)" /note="Predicted" /db_xref="GOA:A8XA11" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="InterPro:IPR013783" /db_xref="UniProtKB/TrEMBL:A8XA11" /protein_id="CAP29476.2" /translation="MAQSVPPGDIQTQPNAKIVFNAPYDDKHTYHIKVINSSARRIGY GIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDAFAYGQEDTNNDRITVEWTNTPDGAA KQFRREWFQGDGMVRRRTFQSSTTHRKSSCVLSINPSHFILLFLLLFFITPT" CDS join(830169..830271,830575..830708,830758..830864, 831360..831459,831802..831945,831993..832057, 832104..832335) /gene="CBG09952" /locus_tag="CBG_09952" /standard_name="CBG09952" /product="Protein CBG09952" /note="contains similarity to Pfam domain PF00782 Dual specificity phosphatase, catalytic domain contains similarity to Interpro domains IPR020422 (Dual specificity phosphatase, subgroup, catalytic domain), IPR024950 (Dual specificity phosphatase), IPR000340 (Dual specificity phosphatase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8XA12" /db_xref="InterPro:IPR000340" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR020422" /db_xref="InterPro:IPR029021" /db_xref="UniProtKB/TrEMBL:A8XA12" /protein_id="CAP29477.1" /translation="MTSRRIINREQRQCSQIRPYLYVSGLAALSPRVLSRFCVCINLI PGFRLSAPPHMKVVHLPLQDNETTDLSPHWANVYKEIEEARKGAGRALLLCAMGISRS ATFAIAYVMQQEKKTLHDSYKAVQLARNIVCPNVGFFQQLIDLEQKLRGKVSCKIIEP LPGCKVPDVIWQELYDEMIMSMSQDDRHSLASCNLSARSTTNDTMSLRSLNMVNDTSR SLASFHLTHRPIGASPTLLVPSSSSSSSVRGPIPLQRAHTEPPKEASILPKSALRDKS KSGEKKKKWRLSFHKDVV" CDS complement(join(833769..833903,833950..834198)) /gene="CBG09953" /locus_tag="CBG_09953" /standard_name="CBG09953" /product="Protein CBG09953" /note="contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domain IPR000535 (Major sperm protein)" /note="Predicted" /db_xref="GOA:G2J6N5" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="InterPro:IPR013783" /db_xref="UniProtKB/TrEMBL:G2J6N5" /protein_id="CAP29478.1" /translation="MAQSVPPGDIQTQPNAKIVFNAPYDDKHTYHIKVINSSARRIGY GIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDAFAYGQEDTNNDRITVEWTNTPDGAA KQFRREWFQGDGMVRRKNLPIEYNP" CDS join(836844..837056,838036..838359,838467..838562, 839298..839388,839439..839546,839620..839849) /gene="CBG09954" /locus_tag="CBG_09954" /standard_name="CBG09954" /product="Protein CBG09954" /note="contains similarity to Pfam domain PF06681 Protein of unknown function (DUF1182) contains similarity to Interpro domain IPR010601 (Protein of unknown function DUF1182)" /note="Predicted" /db_xref="GOA:A8XA14" /db_xref="InterPro:IPR010601" /db_xref="UniProtKB/TrEMBL:A8XA14" /protein_id="CAP29479.2" /translation="MGTFWVQYFNCILHLTYVSKDCFVLTSEFIINDTVISIDPIVTH FLKNSDSFFFAKFIPNFIQTFRSSSNMPTIFFVTLGTFVLSLPLFFLQFYLVFFLWSL VEPRYTIAVCTFVKCITSSTTSCAQVLPLVRNGISVGEKNKKGLQPVAIYRYFIVVRN RKMPSWFVVVVHSFISIVFFVIAILNFPLGEFETNDQCAILRFSKVMEAVRISLTLGL NLFAVLINIAIYTFVKKYDKRNVDVHRRRVQLTYSMLLQSMIPILVSIPLLVGSFDFY FGYTLPSGFTSRWYATTFLSPFLTPISSMLSLRTIRHELLSVLLSSSIFNGTRKISNL VTKTSKTNAVPQSSDYSAA" CDS join(840776..840829,841465..841546,841592..841692, 841758..841966,842018..842231,842421..842535, 842585..842711,842966..843157,843359..843548) /gene="CBG09956" /locus_tag="CBG_09956" /standard_name="CBG09956" /product="Protein CBG09956" /note="contains similarity to Pfam domain PF01529 DHHC palmitoyltransferase contains similarity to Interpro domain IPR001594 (Zinc finger, DHHC-type, palmitoyltransferase)" /note="Predicted" /db_xref="GOA:A8XA15" /db_xref="InterPro:IPR001594" /db_xref="UniProtKB/TrEMBL:A8XA15" /protein_id="CAP29480.2" /translation="MSCRDCTRKGGCVYTTFWLVRFLPVVLVTLATAWGIYAYTYELC ILSIDNWPQRIIYLIVFYTLLVLYYTSYLRTIYTKYFLEGVAKTTYATVKDDERQLQA FLADIARERELTLLVRGFDHGIRFCDKCCCIKPDRSHHCSMCEQCVLKFDHHCPWVNN CVNFGNYKFFLLFLASVNLFLVSIKSSNFRYGFIFCIWIAATTLPSFIDFWKHEYNMN KKTGRFPLVFLLFLSCMFSLSLSFLFFYHLYLTAKNRTTVESFRAPMIDGKYAKDAFN HGIRANYREIFGSRPLYWFLPVASSLGDGCKYKLNDMVASSGGSQVFVEMGGLGAGSG HARPPVVSQHHADLYAATSIEKSETIETEQRLGDGVEFKKWTTEAALKSQGSRNGTNI GPLRYRLLEQRDEAEMQHLYSDDEDDDLDLNVRVV" CDS complement(join(843875..844071,844126..844294, 844337..844395,844445..844602,845075..845201, 845243..845372,845417..845530,846361..846426, 846472..846570)) /gene="Cbr-twk-48" /locus_tag="CBG_09957" /standard_name="CBG09957" /product="Protein CBR-TWK-48" /note="C. briggsae CBR-TWK-48 protein; contains similarity to Pfam domains PF07885 (Ion channel) (2), PF00520 (Ion transport protein) contains similarity to Interpro domains IPR003280 (Two pore domain potassium channel), IPR005821 (Ion transport), IPR013099 (Ion transport 2), IPR003092 (Two pore domain potassium channel, TASK family)" /note="Predicted" /db_xref="GOA:A8XA16" /db_xref="InterPro:IPR003092" /db_xref="InterPro:IPR003280" /db_xref="InterPro:IPR013099" /db_xref="UniProtKB/TrEMBL:A8XA16" /protein_id="CAP29481.1" /translation="MGRRHRRSKVTRVVNLVKKIIAFFFSHIGLCALVVGYALLGAVI FKAVEGPHEAEIQAQVKAARERAVDVVWNATFRVNRLDSKQWKNTVLDEVKVFKTVCM QSIRKGYDGKEYGKQAQWTFTGAFLYSLTVITTIGYGNTAAKTYIGKTLTMLYAIIGI PLMLLFLTNIGDVMAKIFRFLYAQSIRLKFRLILWHKKRKAAKIRRANSLVSRLTRGH RVKTDSSVDSFGLGAGADVEDLLTARVEMEQLEVRETAAAQLESVTVPISLVVFTMLG YLGVGTTIFKVWEGWTFLESFYFCFISLTTIGFGDKFPSTSVSNTDEAQEKLVITSIY LLFGMALLAMCFNLAQEEVQNKTRWIADKFRSKDDDDD" tRNA 844637..844712 /gene="CBG28869" /locus_tag="CBG_28869" /standard_name="CBG28869" /product="RNA transcript CBG28869" /note="C. briggsae predicted tRNA" CDS join(850911..850951,850998..851178,851250..851390, 853351..853815,853870..854006,854053..854149) /gene="Cbr-gpdh-2" /locus_tag="CBG_09958" /standard_name="CBG09958" /product="Protein CBR-GPDH-2" /note="C. briggsae CBR-GPDH-2 protein; contains similarity to Pfam domains PF01210 (NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus) , PF07479 (NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus) contains similarity to Interpro domains IPR006168 (Glycerol-3-phosphate dehydrogenase, NAD-dependent), IPR017751 (Glycerol-3-phosphate dehydrogenase, NAD-dependent, eukaryotic), IPR006109 (Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal), IPR005829 (Sugar transporter, conserved site), IPR011128 (Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal)" /note="Predicted" /db_xref="GOA:A8XA17" /db_xref="InterPro:IPR006109" /db_xref="InterPro:IPR006168" /db_xref="InterPro:IPR008927" /db_xref="InterPro:IPR011128" /db_xref="InterPro:IPR013328" /db_xref="InterPro:IPR017751" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8XA17" /protein_id="CAP29482.1" /translation="MSPKKVTIIGSGNWGSAIARIVGNTTKSFPDQFDPQVRMYVYEE IVNGEKLSEVINTRHENIKYLPGKILPENVVAVTDLVKSCEGSNILIFVVPHQFVKGL CEKLVGKIPADTQAISLIKGVSTGGIERGGLKLISEEIKEILKIEVSVLMGANLAPEV ANDNFCEATIGCKRKAEDGPLLKKLFHTDNFRINVVEDAHTVELCGALKNVVACAAGF TDGLGYGDNTKAAVIRLGLMETTKFVEHYYPGSNLETFFESCGIADLITTCYGGRNRK VCEAFVKTGKTLAEVEKELLNGQSAQGPLTAEEVYLMMKKTGLDAKFPLFTAVHKICA GEMKPAELVDCLRNHPEHM" CDS complement(join(854746..854860,854908..855426, 855471..855740,855783..855817)) /gene="CBG09959" /locus_tag="CBG_09959" /standard_name="CBG09959" /product="Protein CBG09959" /note="contains similarity to Pfam domain PF00153 Mitochondrial carrier protein contains similarity to Interpro domain IPR018108 (Mitochondrial substrate/solute carrier)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XA18" /db_xref="InterPro:IPR018108" /db_xref="InterPro:IPR023395" /db_xref="UniProtKB/TrEMBL:A8XA18" /protein_id="CAP29483.1" /translation="MSGAIQPVPGAKPLSMWQQYGPSEKTVRGIVIGGITGGIEICIT FPTEYVKTQLQLDERSATPKFKGPIDCVKQTVKGHGFFGLYRGLSVLLYGSIPKSSFR FGTFEYLKSQAADERGNLTPVMRLLCGLGAGLSEAVFAVTPMETVKVKFIHDQGLAQP KYKGFVHGVGCIVKAEGLGGIYKGVTATMAKQGSNQAIRFFVMETLKDWYRGGDNTQT ISKPIVGLMGAVAGAASVYGNTPIDVVKTRMQGLEAKKYKNTLDCAMQIWKKEGFFAF YKGTVPRLSRVCLDVGITFMIYDSIIEFLDSYWKKK" CDS complement(856528..856734) /gene="CBG25902" /locus_tag="CBG_25902" /standard_name="CBG25902" /product="Protein CBG25902" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHL2" /protein_id="CAR99413.1" /translation="MFIGLTVVVVVSYSNATDPVSEMRFQSIFHLFVTQFLSVHLFQP SGYFAFRVFFKSWPRDSVCSFFLS" CDS join(858446..858547,858760..858891) /gene="Cbr-mrpl-36" /locus_tag="CBG_09961" /standard_name="CBG09961" /product="Protein CBR-MRPL-36" /note="C. briggsae CBR-MRPL-36 protein; contains similarity to Pfam domain PF00444 Ribosomal protein L36 contains similarity to Interpro domain IPR000473 (Ribosomal protein L36)" /note="Predicted" /db_xref="GOA:A8XA19" /db_xref="InterPro:IPR000473" /db_xref="InterPro:IPR035977" /db_xref="UniProtKB/TrEMBL:A8XA19" /protein_id="CAP29484.1" /translation="MNSVINRALTQGSSAIRQFLAVRSPMCQEVAGFKVKSRLKLRCR CCYFIRVDGRLHVECHENPRHKAREVYDIKKLW" CDS join(859300..859362,859702..859980,860027..860173) /gene="CBG09962" /locus_tag="CBG_09962" /standard_name="CBG09962" /product="Protein CBG09962" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XA20" /protein_id="CAP29485.2" /translation="MEQSPNFKSNLNSEMSDLIHQGNSKWTELLEETLASFSPINCRR RTSLFSDLQILSPIVSETSQSPEKTKKQQMSTPHITPFRRPLFSSMSTPKTQWRRGNS MYVEDVANTTITPQKALSTSRLSIQSPVPLAGETPLENRASRLRRMKIEEKMREIQMG WN" CDS complement(join(860783..860871,861191..861300, 862849..862979)) /gene="CBG09963" /locus_tag="CBG_09963" /standard_name="CBG09963" /product="Protein CBG09963" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XA21" /protein_id="CAP29486.1" /translation="MRLHLTLLLIIFSILILFSSAKPVFGPIGVAEKHKIAKMLESEQ KSLRMLEEEQALLERVVETLSKEIEDKEEHINKLKRSYTHGHGVSGIMDEYRSGFNDA VGARPGR" assembly_gap 864183..864192 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(868090..868290,868390..868473, 868841..869017,869061..869123)) /gene="CBG09964" /locus_tag="CBG_09964" /standard_name="CBG09964" /product="Protein CBG09964" /note="contains similarity to Interpro domain IPR007087 (Zinc finger, C2H2)" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B0K076" /protein_id="CAP29487.4" /translation="MNISGFDKQEKPKRKDEESSSKKGSVLEERKRRRSNSQSLLPPR KSRRREGIDRSRSPLRHYLSDVSSDKELTDNRKYGPKKCEVCHCEMQMAANFLSHVLS AAHISKCLAGVNTKKRRFTLELDYLPLRKEIEHARRRHLESPPKPSQKGSRPPPSRKR DSRSRSPPYNKSAN" assembly_gap 870313..871312 /estimated_length=1000 /gap_type="between scaffolds" CDS complement(join(872649..872849,872949..873032, 873400..873576,873620..873995,875289..875350)) /gene="CBG09966" /locus_tag="CBG_09966" /standard_name="CBG09966" /product="Protein CBG09966" /note="contains similarity to Pfam domain PF02213 GYF domain contains similarity to Interpro domains IPR003169 (GYF), IPR007087 (Zinc finger, C2H2)" /note="Predicted" /db_xref="InterPro:IPR003169" /db_xref="InterPro:IPR035445" /db_xref="UniProtKB/TrEMBL:B0K077" /protein_id="CAP29488.4" /translation="MKKEIEDELTVFYTDDHGTIQGPYAASTVLSWYQRKFFSAHHLI RITDNGQYEGSNITIAKSLGELIQIFGKEEPIPLTVSQVPRATFHSFSINPLSEIQPG NVIKQTTEKKEFLNVTRSNTSENMNISGFDKQEKPKRKDEESSSKKGSVLEERKRRRS NSQSLLPPRKSRRREGIDRSRSPLRHYLSDVSSDKELTDNRKYGPKKCEVCHCEMQMA ANFLSHVLSAAHISKCLAGVNTKKRRFTLELDYLPLRKEIEHARRRHLESPPKPSQKG SRPPPSRKRDSRSRSPPYNKSAN" CDS complement(join(876276..876469,876507..876602, 876650..876748,876790..877047,877093..877464, 877515..877627,877676..877707,878198..878331, 878376..878768,878819..878834)) /gene="CBG09969" /locus_tag="CBG_09969" /standard_name="CBG09969" /product="Protein CBG09969" /note="contains similarity to Pfam domains PF00169 (PH domain) , PF01363 (FYVE zinc finger) , PF02213 (GYF domain) contains similarity to Interpro domains IPR001849 (Pleckstrin homology domain), IPR000306 (Zinc finger, FYVE-type), IPR003169 (GYF)" /note="Predicted" /db_xref="GOA:A8XA23" /db_xref="InterPro:IPR000306" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR003169" /db_xref="InterPro:IPR011011" /db_xref="InterPro:IPR011993" /db_xref="InterPro:IPR035445" /db_xref="InterPro:IPR037871" /db_xref="UniProtKB/TrEMBL:A8XA23" /protein_id="CAP29490.2" /translation="MVDRLVNSEVNARRMANVEQCFGKMGEPLAQFGRVLVGEGVLVK MCRKKPKQRQFFLFNDILVYGNIVISKKRYNKQRILRLEGVQVEDLEDDGAQKYGWII KTPAKSFAVYAATETEKREWMLHIERCVSDILERGIKQAATAHAAVWIPDGEATKCMV CGKTQFNLVQRRHHCRNCGRVYSYIDLEGNKYGPFDGCKMAYWDREGHMDDDLKIFRI SASGKIEEFILGEMKTHSKDPFLEIDSSSTGGYKEDVKVKIQEYDCCSQRSLVSKYNK ENGRGDEETSSQLLTDPNQCRVRIEAYLHGSVPVKKIKRTPATKNSSTDSLREYHPEV YPSPPFMRLPDSRFPIMTPEDARRKLFSLYQLIITIPDQLGHFPPYTTETVSCQLCKI NLSGPSMFKHLINIQHLMKVSNCLFTENDIDYWIDRVNTVMKGAHIGSLSLPGFEPVM NLNATESVSDFINRTKGFARKPSADLIGRPLNVLSTVLDIDAATMFATMNTHKTMMIS ERKLSGTFLSRVVNTLIGNIDKTTFKRRFTAPLLKLLEKHVKSTFRSNSLFLYTEQMS VL" assembly_gap 878065..878166 /estimated_length=102 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 879435..880434 /estimated_length=1000 /gap_type="between scaffolds" CDS join(881426..881535,881580..881681,881751..881838, 881882..882156,882209..882359,882677..882808) /gene="Cbr-sqv-3" /locus_tag="CBG_09970" /standard_name="CBG09970" /product="Protein CBR-SQV-3" /note="C. briggsae CBR-SQV-3 protein; contains similarity to Interpro domain IPR003859 (Galactosyltransferase, metazoa)" /note="Predicted" /db_xref="GOA:A8XA24" /db_xref="InterPro:IPR003859" /db_xref="InterPro:IPR027791" /db_xref="InterPro:IPR027995" /db_xref="InterPro:IPR029044" /db_xref="UniProtKB/TrEMBL:A8XA24" /protein_id="CAP29491.2" /translation="MKLKARLILSGIILISLLLCYLVVLVVLDMDLMTDYIDPRPPQI SIHKLCVIVPYRDRFEELREFSPHMSQFLHNQNVSHHILIINQTDSLRFNRASLINVG WNEADRLGCDYMVMNDVDLLPINPEVPYNFPEVGIIRHITSPEYHPKYHYEKFIGGIL MLTLRDYKKLNGMSNKYWGWGLEDDEFYLRVVDSKLNLTRVSGLSTNSTNTFRHIHGP KRKRDYTPKKKDMKQWEIKRKRDHESGLRNVRYTIENRRLIDFSGSSVTVINVALYCD MSWTPYCKS" CDS complement(join(883271..883606,883655..883834, 883883..884295,884339..884564,884612..884704)) /gene="Cbr-usp-46" /locus_tag="CBG_09971" /standard_name="CBG09971" /product="Protein CBR-USP-46" /note="C. briggsae CBR-USP-46 protein; contains similarity to Pfam domain PF00443 Ubiquitin carboxyl-terminal hydrolase contains similarity to Interpro domains IPR001394 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2), IPR018200 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XA25" /db_xref="InterPro:IPR001394" /db_xref="InterPro:IPR018200" /db_xref="InterPro:IPR028889" /db_xref="InterPro:IPR038765" /db_xref="UniProtKB/TrEMBL:A8XA25" /protein_id="CAP29492.1" /translation="MGANGSSQLEREISRTESGTLTNEHYYGLVNFGNTCYCNSVIQA LFFCRPFREKMLNYRQTLKKSGTSKETLMTCLADLFHSIANQKRRVGTIAPKRFITKL KKENESFDNYVQQDAHEFFNYLLNSISEALITDKKAEREKSSRHGTIKKGNVTVNMSP ATAGISKDERERNGTEGSDSRPESTWIHEIFEGILTNETKCLSCDTKSCKDENFLDLS IDVEQNTSITHCLRVFSETETLCGDQKYYCETCSSKQEAQKRMRIKKPPQLLALHLKR FKYVDSLNRHTKLSYRVVFPLELRLFNVSDDAEEADQIYDLVATVVHCGATPNRGHYI TLVKSNSFWLVFDDDIVEKLDVSSMEEFSGMSTEATAQMTSNQSAPQKNSESAYILFY QARNYVAEDSNHSHRPKNSTHSV" CDS join(889279..890235,890781..890807) /gene="CBG09973" /locus_tag="CBG_09973" /standard_name="CBG09973" /product="Protein CBG09973" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XA26" /protein_id="CAP29493.2" /translation="MSECKYQDGSCPIKKNEIMIWDVNTSQNCQYISIRKLDGIMNNG LWINSENQIALSLNKNNIVRDCNLDLLISDEGFAVRQLQNEIPRIPTESKFPRSIGLT QQALPSTPSLQEMSSTSEISRSEGLSNPQKYAESSTPRSEGLYQKEREEYYKRQREIQ KDRELREQQIQMDRNRIQKEKDKEVRDKYEADRKEFEKRREEKMKQYLEFEKRKKEKM ERQGLLNTTTTTSVNSNKIKDSEIQRIETTNRIKRSIEANQSLEDTSRPFPLPTYEEY SKIKNDCSLLPSYADYLRSKDKEIKDFIRSKDACDTFPSYDEYRMSNSLWG" CDS complement(join(892388..892459,892603..892938, 893152..893347,893398..893605,893652..897488, 897538..897754,897796..898344,898612..899433, 899483..899559,899606..899645)) /gene="Cbr-cbp-1" /locus_tag="CBG_09974" /standard_name="CBG09974" /product="Protein CBR-CBP-1" /note="C. briggsae CBR-CBP-1 protein; contains similarity to Pfam domains PF06001 (Domain of Unknown Function (DUF902)) , PF00569 (Zinc finger, ZZ type) , PF00439 (Bromodomain) , PF02135 (TAZ zinc finger) (3), PF02172 (KIX domain) , PF08214 (Histone acetylation protein) contains similarity to Interpro domains IPR010303 (Domain of unknown function DUF902, CREBbp), IPR019786 (Zinc finger, PHD-type, conserved site), IPR018359 (Bromodomain, conserved site), IPR001487 (Bromodomain), IPR003101 (Coactivator CBP, KIX), IPR013178 (Histone H3-K56 acetyltransferase, RTT109), IPR000197 (Zinc finger, TAZ-type), IPR000433 (Zinc finger, ZZ-type)" /note="Predicted" /db_xref="GOA:A8XA27" /db_xref="InterPro:IPR000197" /db_xref="InterPro:IPR000433" /db_xref="InterPro:IPR001487" /db_xref="InterPro:IPR003101" /db_xref="InterPro:IPR010303" /db_xref="InterPro:IPR013083" /db_xref="InterPro:IPR013178" /db_xref="InterPro:IPR018359" /db_xref="InterPro:IPR031162" /db_xref="InterPro:IPR035898" /db_xref="InterPro:IPR036427" /db_xref="InterPro:IPR036529" /db_xref="InterPro:IPR038547" /db_xref="UniProtKB/TrEMBL:A8XA27" /protein_id="CAP29494.2" /translation="MDEPPSKKSRADSEYDSGLDALSALDNLEPLPTSSKETDVDNPS TSAGGSAGPSGSTPQQHPPQQGTPQPSQSGSVGFNLQPGQPGVQQQQQPQTMGGGANG SVLQELLMNPSQASNNSPRPPGYPTGQQNAFSRSPMMSNGTPNMMSPPNMGGRVPGPS PGGPQQVPGQPQMRPGQQGMYPPGGDQQMMMGAQGQQFPGMMPRYPQYAQTGPPGAQG IPQPGYPGAGRGGPNPGQQMGRGGMMNGTMGRNGPMAPQGRPGMPPNQQQMMQPMMDR QFMQHSQYGQQRPEFMQQYGRGPASGYPMMHPQHQQQMMMEANGRPPHMMMMNNGHPG MGHVPPTGPGAQAAAAQHAAQQAAAAQAAAAQQHQQQQQQQQQRDQDAQRNGAARATT PGSSMLATHQDPEKRKLIQQQLVLLLHAHKCSQREKVLAIKNATIPFLKFCFQENRDY AAKNQPPPHAPCTLPHCSTMKDVLSHMTSCNVGRLCPCKFSRSRCVQEEAHNPTNISL HSSHCLKSLSADTTQTTKKCSVAHCASSRQIIAHWKNCSREDCPVCKPLKRIQDTPLQ FSLPDLANLIGVNGNSNGSAEGDGLSQFGSPSMRSGQIPNSLFEGFHGDPFQRNGNRG AQRPGGSNGEIPNLPPPDMPDCTKEWHHQVTKDLRNHLVGKLVKAIFPEPDPGAMNDN RLKDLIAYARKVEKEMFESANDREEYYHLLAEKIYKIQKELQEKKNSRLSTQGAAPHD RKLSLLKGSDFNSFSSAYNNIPPSNELAQMLGVEGGRSNDVHMDGSMGAPSQQHTPWG GAPNSNVQNMPNGQIPPLNNGSTFPQSGSSTPNMGAPSTTGGLLQPKLEPMDENVDSM SSRPTTAAGFGGGSSSSTPAPMLNGIVIKKEEDSMDETSNQAPESVKDVKPSEKPSEP QVKREPTPPLAEDTVFTQEDLIKFLSPVWETLDKAEDAAPFRAPVDAKLLNIPDYHDI IKRPMDLETIHKKLHSGQYQNAFQFVDDIWLMFDNAWLYNRKNSKVYKFGIKLSELFV AEMDPVMKVMGYCCAKKLAFTPLSLFCYGAAMCTIAREQQYWVYEQSSTQYNVTVTER YTYCQKCFDALPPEGISLSENPNDRTNMAPKTAFKDMKNNNVDYEPFERCKYCMRKWH RICALHDKKVYPEGFICECCRTAKKYQKPENKYLASKLPHNQLSTFLEDRVNGFIKKQ LQAEAHKYPVIIRTLCVQDKEAEVKPQMKQKYVESGQFPEKFPYRTKAVFAFEIIDGV EVCFFGLHVQEYGSDCPAPNARRVYIAYLDSVHFFQPRELRTDVYHEILLGYLDYAKK LGYTMAHIWACPPSEGDDYIFHCHPPEQKIPKPKRLQDWYKKMLEKGVQEGSVVEFKD IYKQARDDNLVTPTQLPYFEGDFWPNVIEDCIREASNEEAQRKVKEDDDDGDDADGGL GGSDSGKKKSTKNKKNNLKKTTKMNKKKAGSLTGNEVADKLFSQFEKHKEVFFTIRLV SLKDEPTVLATGINDPDGLMPSDMMDGRDTFLTKAREEHWEFSSLRRAKYSTLCLAYS LHEADSKGMEYTCNKCNGPATWHCQTCDDFDLCDRCKPSVSHPHELEKMKNLMTGEGP ESASSGSRYESIQRCIASLVHACQCRDANCRRMSCHKMKRVVQHTKLCKKRISGTCPV CKQLIALCCYHAKHCNRDGCTVPFCMNIRQKLAEQKRSQQRRADMMMRRRMEGLHSLV GGGPVPPTPSVPTNNAAVPTNVPTPPTNAAAPGQPGPAVKGGGVGQAQPQQQQGGPMS AGTPNGVPGNGIGTAPLSAGIGQSLGFGGGLGMPSGGPSSAQNGPLPGNNPPSIGGQN QGRFMPNGQGFGQGQPSGGQQGIYPGMQRPGMGHGGLGGMNQTQPQQMPGQAGLSGQQ QPGRPGIPGIGQNPQFRPNQDMYNMMNMPQGQQQPQQPIDNTLAPQITKINARLKAAK TNQEREMVFSDLKKTPHLFHAWLRVHGNSGQYNPMMAQQMQGVPPMQMGQNPQQQQMQ QQQANMRVGANFAAGPNQPRGPGGQFASMNPSMSQHGQQQPGGWPQQRQQNPGMPQNN MPFNQVGFSYMFSLIRDICRFQNRQQMMMMQQQQSHPSNAGGQ" CDS join(905932..905997,906047..906148,906197..906295, 906345..906580,906623..906838,906887..906998, 907045..907716,908801..909034,909077..909293, 909638..909708) /gene="CBG09976" /locus_tag="CBG_09976" /standard_name="CBG09976" /product="Protein CBG09976" /note="contains similarity to Pfam domain PF01465 GRIP domain contains similarity to Interpro domain IPR000237 (GRIP)" /note="Predicted" /db_xref="GOA:A8XA28" /db_xref="InterPro:IPR000237" /db_xref="InterPro:IPR032023" /db_xref="UniProtKB/TrEMBL:A8XA28" /protein_id="CAP29495.1" /translation="MSSLDSSKSPVPPAGSSGGGNKLDSLSKEDLVKFAKKQVAHLAE MKKNQAALMEKLKTKIGELEQLKNQSDNLKLVNDKLTSEAAQKVENNPTECTECLSKS GALIDLEKEVVEWKEKGTRADMFSLEIRDLESKMDQLNRALREKTEALVKAQEVITEN DLAVNNMKKESSSSKSSIEKLTEENTRLSKAYEDEKAKRADFEGRLKSAECRIAELSD QQGNEKLGLARKMAESENRGRILEEAVDVLKGEKERLASKNEEYASKLEAAEKEFAEF KKKSHFVLEKKGKQADETRKLTEDLEKAKVTIAELEEQAGQTRQEHFKTLEDLAFSRD KMEKLERSLKAVKAELAETEKSHSTAMDELRSSSSKLIQRLDEELRLMRSSRDTAEQK IKDLEMTKEKVDHLLQNERQRSENENGSLKSKLSTATKQIQHLEKEVYDLKTDSENRR IQSHQQQQQKAIAAVVPQQIQLPEHPIPPHHYQRPTVAPSDSVSCYDEQTQPDRSLED VLYGDLGDEYSEWTYFVFRFYRLITGVESDELSEEKFKALIEQLDNLKKTNHHVAELL SEAETTNGRLTTQNSLLKDEIRRLEREEKREAELSNEKNMEYLKNVFVQFLKPESVPA EREQLVVVLQRVLHLSPNEVDILKAASAHMATAQTGTWSSYFTGWTATTS" CDS complement(join(907793..908041,908091..908519, 908574..908576)) /gene="Cbr-rmd-1" /locus_tag="CBG_09977" /standard_name="CBG09977" /product="Protein CBR-RMD-1" /note="C. briggsae CBR-RMD-1 protein ;" /note="Predicted" /db_xref="GOA:A8XA29" /db_xref="InterPro:IPR011990" /db_xref="UniProtKB/TrEMBL:A8XA29" /protein_id="CAP29496.2" /translation="MESFAVSDKQFDDREFANGLNELKKRRENGELSCDLLWRMCRFC HELSNTMTGEQRRKVLIEGRDYGLQAMELDPNCFLAAKWAAILFGLVVDQLPTKEKIS EGGKLKDMLDKALELEPTDFALLHLRARFSFTLANLSWLERKAASMLYSEVPKATIDD ALVDFEAAYQQHSDWIENLLFLSKCHIAKKEKKQARELLSKAIELPKESSNDEQFVTE CKSLLQKC" CDS join(910002..910334,910381..910683,910731..911395, 911444..911812,911858..912209,912257..912625) /gene="CBG09978" /locus_tag="CBG_09978" /standard_name="CBG09978" /product="Protein CBG09978" /note="contains similarity to Pfam domain PF04100 Vps53-like, N-terminal contains similarity to Interpro domain IPR007234 (Vps53-like, N-terminal)" /note="Predicted" /db_xref="GOA:A8XA30" /db_xref="InterPro:IPR007234" /db_xref="InterPro:IPR039766" /db_xref="UniProtKB/TrEMBL:A8XA30" /protein_id="CAP29497.1" /translation="MEEPNDLNLSDTVMSEIKGMCVTEYSKPNMSLIAQINELFPTEQ SLTQLDSVIAAVEGEIGELDNELAYLVETNANVSERGEEALKHAQKAMVELEKSIGSI RERTKSSDEIVREMTRDIKQLDIAKRNLTASITTLHHLHILLTGVESLGAWVEKKDYS SIARQLPAILNVLQLFDAYKESEQIANLSEQLDKFKSSLTIQLARDLKNAFQTGQLSD RITDMCRVAAALEGNVKENFVKWFIEQQLSEYCIIYADNEEGAWLDKVDDRYKWFVRK LTDFERAGLSNIFPNDWHMGRRLTSEFCIVTRDILYRIMTRRRQDLDWKLLGHAIQHT KMFEALLTKRFPEKDGISFEKTIWSVFDPFLDVFINAQEKTLNEFLDTCASKIRSGEE KPTRESSTHAVPFPSSADMFLLLKKVITESSKLSSEPDALIRDVIGVVRVCLRGYATS CLIAFLPSLGSQQSGAANLFSLIREEVAYPRLTPDQQFLVCCILATADWCAETSIQLQ EKLAQRIPGVDITQETEAFYSITNQSLLVLVQDVESTCDAALQSISKVNWSSVDCVGD ESPFIGAMRAHLRQAVPLVRDMLSDRRKYFAHFCLKLATQLAHKFVGSLFRCRAISTH GAEQLLLDTHSLKTFLLSVPSIDSVINSKPPTAYVTSVNAALTKAEMILKVVMCSLDT VDEFVEQYIKLLPASDAAEMQKVLEMKGVKRQEHSAVLNTYRIKIGASGSDPIPPSNS LTSRIGGALPTVGSAASVSEAFNAVVSLAADGLSDQTVTSSIDKLKRFERLVKRQL" CDS join(913064..913366,913414..913624,913670..913968, 914114..914161) /gene="CBG09979" /locus_tag="CBG_09979" /standard_name="CBG09979" /product="Protein CBG09979" /note="contains similarity to Pfam domain PF00378 Enoyl-CoA hydratase/isomerase family contains similarity to Interpro domains IPR018376 (Enoyl-CoA hydratase/isomerase, conserved site), IPR001753 (Crotonase, core)" /note="Predicted" /db_xref="GOA:A8XA31" /db_xref="InterPro:IPR001753" /db_xref="InterPro:IPR014748" /db_xref="InterPro:IPR018376" /db_xref="InterPro:IPR029045" /db_xref="UniProtKB/TrEMBL:A8XA31" /protein_id="CAP29498.1" /translation="MMRFSSMLVRNVRLCANANQMQVAAFSSKAPEMIKVEKVGEKQN VALVKLNRPKALNALCAQLMTELSDALQNLDTDKSVGAIVITGSERAFAAGADIKEMT NNEFASTFSGSFLSNWTAVTDVKKPVIAAVNGYALGGGNELAMMCDIIYAGEKARFGQ PEINIGTIPGAGGTQRWARAAGKSFTMEVCLTGNQVSAQEAKDRGIVSKVFPVDQVVG EAVKLGEKIADQSPLIVQMAKEAVNKAYELTLQEGLHFERRLFHTTFATKDRKHHYIA VNFVDNSFGS" CDS complement(join(914265..914267,914381..914679, 914722..914830,914881..914980,915028..915131)) /gene="CBG09980" /locus_tag="CBG_09980" /standard_name="CBG09980" /product="Protein CBG09980" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XA32" /protein_id="CAP29499.2" /translation="MSKRQSRPLFIHEGFLLRQQKSLADGTELLYCDKRQTLGCTASA RRVNGHIFMRTGHILHEADEEFANTKLAKHALKQIAANTTCSPKKLIDELQSSLGPIS LGASRLALTRMIHRARQTTAEPNATVKLEQKPELLEDHADVSDDLPDANIGELLQNII KQEEPEEETEMTQSSSSNINHSHQTITIPVGSFFETLQDIVRYN" assembly_gap 915388..915532 /estimated_length=145 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(915882..916301,916343..916582, 916630..916777,916823..917011,917056..917162, 917210..917309,917355..917431,917475..917532, 917577..917659)) /gene="CBG09981" /locus_tag="CBG_09981" /standard_name="CBG09981" /product="Protein CBG09981" /note="contains similarity to Pfam domain PF04046 PSP contains similarity to Interpro domain IPR006568 (PSP, proline-rich)" /note="Predicted" /db_xref="InterPro:IPR006568" /db_xref="UniProtKB/TrEMBL:A8XA33" /protein_id="CAP29500.2" /translation="MSDIEILEDVEPTPAKHKLQNTRLQRKRKRTSSGLIEKCGTMKT EFEEFVIDRTITQQRKLVLKDVENSAGTESVSNWRIALENSLLGTTQNPVAFKTPATI RFQKKCFNCDGEHVLQDCPSPRDFRRISMKKRESADMNTPRRKFIVSNSVGLSKHKAN SFKPGEMSETLRTALGLDINEIPVHVYRMRRLGLIDGYPPGWLRKAVKKTDVLKFYTA DNTDNSKDTSAASPELDMSKIAWYPGFNEVDSNLVDHESFKVPPTDVFHSVFQEKLTE MFKKQRKAMKRSKSKNEKRQSSRHTKFTENDEEDDVVIVENGEGETDSTKLKFKTPGE DGVVVMLKGSDRVGDIDSEPLPKKDVEVGESLFSTIGIPVFEKLTTLAPLEAFAVGIQ PFASGTEDVESKGIFHKLMKKLNDARTQNLKPESQSNEKYEKLSGSGSANDEKLSPIK PKKNKSKKKKKRRKTEDPDLEIL" CDS join(<916138..916288,916345..>916421) /codon_start=1 /gene="CBG09916" /locus_tag="CBG_09916" /standard_name="CBG09916" /product="Protein CBG09916" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XA34" /protein_id="CAP29501.1" /translation="TANASRGAKVVSFSKTGIPIVENKDSPTSTSFFGNGSESISPTR SLPFNITPGVLNFSFVESVSPSPFSTMTTSSS" CDS join(919690..919731,919776..919928,920110..920148) /gene="CBG09982" /locus_tag="CBG_09982" /standard_name="CBG09982" /product="Protein CBG09982" /note="contains similarity to Pfam domain PF01679 Proteolipid membrane potential modulator contains similarity to Interpro domain IPR000612 (Proteolipid membrane potential modulator)" /note="Predicted" /db_xref="GOA:A8XA35" /db_xref="InterPro:IPR000612" /db_xref="UniProtKB/TrEMBL:A8XA35" /protein_id="CAP29502.1" /translation="MCQVLLAILALFLPPIAVLLDVGCNCDLCINILLTCLGIIPGII HAWYIILCKEKSVVQNIYVQTSNHGTAPPAYSA" CDS join(921091..921144,921271..921408) /gene="CBG09983" /locus_tag="CBG_09983" /standard_name="CBG09983" /product="Protein CBG09983" /note="Predicted" /db_xref="InterPro:IPR018792" /db_xref="UniProtKB/TrEMBL:A8XA36" /protein_id="CAP29503.2" /translation="MSSNAEAMATAFEQDGGPDLSAGSGKRTKAERVEHKHSSQPGGD TRKVVQTASNGEAKRKEKW" CDS join(921834..921945,921995..922168,922214..922416) /gene="Cbr-lin-52" /locus_tag="CBG_09984" /standard_name="CBG09984" /product="Protein CBR-LIN-52" /note="C. briggsae CBR-LIN-52 protein; contains similarity to Pfam domain PF10044 Retinal tissue protein contains similarity to Interpro domain IPR018737 (DREAM complex, subunit Lin-52)" /note="Predicted" /db_xref="GOA:A8XA37" /db_xref="InterPro:IPR018737" /db_xref="UniProtKB/TrEMBL:A8XA37" /protein_id="CAP29504.1" /translation="MSRPIGYIGYEFGDDEMFMQQMINDEKSTDLNKEKFLEQQKKML ECLETMAEDEEPVPTKSLNFEEAFQSNTLPEGYKSPYKTIPFLTEDVVTVNTMSHCPP DDIAKLIRNIQNSVYTLGLDEARQCRRGKLLDVLKSNTPTDHFQQQTPPQKSSPIPTD NH" CDS complement(join(922583..922774,922821..922891, 922944..923104,923322..923382,923429..923477)) /gene="Cbr-arl-5" /locus_tag="CBG_09985" /standard_name="CBG09985" /product="Protein CBR-ARL-5" /note="C. briggsae CBR-ARL-5 protein; contains similarity to Pfam domains PF09439 (Signal recognition particle receptor beta subunit) , PF04670 (Gtr1/RagA G protein conserved region) , PF08477 (Miro-like protein) contains similarity to Interpro domains IPR006687 (Small GTPase superfamily, SAR1-type), IPR013684 (Mitochondrial Rho-like), IPR005225 (Small GTP-binding protein domain), IPR001806 (Small GTPase superfamily), IPR019009 (Signal recognition particle receptor, beta subunit), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR006762 (Gtr1/RagA G protein), IPR024156 (Small GTPase superfamily, ARF type)" /note="Predicted" /db_xref="GOA:A8XA38" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR006689" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8XA38" /protein_id="CAP29505.1" /translation="MGLIMAKLFQSWWAGKKYKIIVVGLDNAGKTTILYNYVTKDQIE TKPTIGSNVEEVSYKNLDFVIWDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRLPL MKEQLHNMLQHEDLARSHVLVLANKQDLPGSLNPADVSLQLGLQTLRGRKWQINGCCA LKGEGLPEALEWIANNL" CDS complement(join(924180..924240,924359..924583, 924641..924832,924881..925268,925317..925412, 925455..925577,925625..925934,925987..926346, 926396..926445,926599..926722)) /gene="Cbr-panl-3" /locus_tag="CBG_09986" /standard_name="CBG09986" /product="Protein CBR-PANL-3" /note="C. briggsae CBR-PANL-3 protein ;" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XA39" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR030844" /db_xref="InterPro:IPR041332" /db_xref="UniProtKB/TrEMBL:A8XA39" /protein_id="CAP29506.2" /translation="MQSNEGYQFDGGPNQGPGQGQGQGLPAGSRLNQYLANNSRQALL TGPSFGPGTPINVNAPIFIPKHQQPQPPPPPPPAVNQFAQLAIHDVPVQMIPFNQINA GPQHYGPPPHMSHRPSMQHHHPQPMAPPPPHVQVPYDRYHQESRGGTTYFYNEPSDQP LDAEHYHEVDGNEGGIVVNTSGVFCYNAPLPLAHMTRFRGKPNSTQQTQFISPELRME LLNRQLAFDTKVDPNLYPEIPQNVEHFTNLVPLENTGMQNQSHSTYKAISCRDGNFYC LRRIHGNRIQQPGKQTHLVEQWKKLVHGNIVPLREVLLNCRAFEDYSLIFAYDYYPLA ETLMTKHFDPKNVTNFYDPANNFRITSPMGVPVSLGPSGANETMIWSYIIQIAAALRA IHASGLACRTLDLNKIICYGNKIMLSFCGIADVLDPDSTPIQQQQNEDLNMFGNIIVS LATGRANAWRKDLYPQSKKLIDENFSIDLRNVIGFLHNNGSRKTINEIMPMIGGRFFT VMENMQAKTDVLEGELSREMENGRLLRLLAKMNTVLERVENGTEEGWSETGDRFMLKL FRDYVFHQVTDQGRAWLDMAHIVQCLNKLDCGTLEKIEMVARGGDTQIIIDYATLKKC LEKSYRELMGNTMMIVHR" CDS join(928619..928966,929217..929287,929330..929675, 929731..930078,930124..930289,930316..930926) /gene="Cbr-cnx-1" /locus_tag="CBG_09987" /standard_name="CBG09987" /product="Protein CBR-CNX-1" /note="C. briggsae CBR-CNX-1 protein; contains similarity to Pfam domain PF00262 Calreticulin family contains similarity to Interpro domains IPR018124 (Calreticulin/calnexin, conserved site), IPR001580 (Calreticulin/calnexin)" /note="Predicted" /db_xref="GOA:A8XA40" /db_xref="InterPro:IPR001580" /db_xref="InterPro:IPR009033" /db_xref="InterPro:IPR013320" /db_xref="InterPro:IPR018124" /db_xref="UniProtKB/Swiss-Prot:A8XA40" /protein_id="CAP29507.2" /translation="MLNRKWSFVFLTFLLVISVNANDDVFEDEDEASESGVEKDEFVP SNFVAPKLADTSKPNFFDYFPVGSKIGQTWIKSLAKKDDVDSEIAKYNGEWSIGAPTK VSIEGDYGLIVKTKARHHAIAAKLETPFVFGSNKFIAQYDVKFEEGQECGGGYLKLLS EGAEKDLASFQDKTPYTIMFGPDKCGASGQVHLIFRYKNPVNGTVSEYHAKQPASIGT AYWDDHNTHLFTLVVKPTGEYSVSVDGKSLYYGNMLSDISPSLTPPKEIFDETDLKPE DWDEREQIEDETASKPDDWDENEPQNVVDESATKPYDWNEEENELIPDPEAQKPQDWD EDMDGSWEAPLIDNPACKGLSGCGTWKPPTIKNPKYRGKWVRPKIANPAYKGKWSPRL IDNPNYFEPKPFDGLAPISAVGIELWTMSENILFDQVLFIDNILITSSEQDASEIAKQ TFYIKQQEEYRLAAATGSSNGIFQQIVDATNEKPWLWAVYILCILLPLIAIGVFCFGK GSKPAPNFAKKSDTYSPDDDRVPNLVDDQEEEIIAEDEEDNQPGPSGTQNQPPIDEDE QDEVEQQPSSSKTASSESSSAAEEEDNDHVVHENEPVQPTEEVAKKSPRVTGGAKRRT ARRGD" CDS complement(join(931235..931451,931499..931579, 931626..931705,931753..932001)) /gene="CBG09988" /locus_tag="CBG_09988" /standard_name="CBG09988" /product="Protein CBG09988" /note="contains similarity to Pfam domain PF01918 Alba contains similarity to Interpro domain IPR002775 (DNA/RNA-binding protein Alba-like)" /note="Predicted" /db_xref="GOA:A8XA41" /db_xref="InterPro:IPR002775" /db_xref="InterPro:IPR036882" /db_xref="UniProtKB/TrEMBL:A8XA41" /protein_id="CAP29508.1" /translation="MDNYVPSDETTVEPENPFPAPYNGEDVKTMLVSKSSKFSKINGH VREYFTEKPDCNRFVIYKSTNGATEKAISCVEVFKQQFEEPIYQWTRAVCSKRVVLWK CQQEGPRDIRVTVEVPVIFIVISRDPFPGEYSCMSMQCSSDKEIAFLPALRSSKKSAG GKSDKKDKKGNRRTNEGNKWTKPTSEQRKKEHKERNELLKEIECSKKQ" CDS complement(join(932160..932284,932335..932443, 932488..932640,932687..932955,933001..933095, 933147..933671,933719..933828,933998..934136, 934182..934653,934702..934840,934884..934999, 935051..935141,935189..935320)) /gene="CBG09989" /locus_tag="CBG_09989" /standard_name="CBG09989" /product="Protein CBG09989" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XA42" /protein_id="CAP29509.1" /translation="MLSSLSFLINGEINDQQRHQKLRNLQCLYMINKQKPIRDDNGNP FYAQDLSDDLNHRIINLKLEAFQTVVTDILDKLRLHDEALHYFVLVATFRLPDEKLEK TLIEISVQQNLMMRIDGKYKRRLYSEPLEHDNIPRLAWDISPVLKTLKVAEIDKPVMP SEPREVNPVDEWGLISRELRDILCCEELNLSAREGQPIEFFHLKSNIFFKNLLDMHRG VSSDLFQLDGDNHFYQAKPCRVDEWNLTTTRTVLQKHLFLANQLLEFVKKLKHHFVSS TTNSVRILIQRYLIDEQQIFSEYIDSSLGNSLNVQFEHIVGSFPSLNIQSSDSNRFEV LDHIYETVSAHYHVIREMNHVVSRMNDYSPILLNEMSFIGSQSAPQFYSRQMWRRLNV SLIRFIVNKLAEMLTTPDAELMELLTDAGDAKQIKDPSIWQRLNPLTMESSQCVDEEL ANRVADLIIGYQFFINDKNNKSYKSDGSTFAITDIQDAEELELFAKTPHFEKILYGIL SQLDVNSTDENLDELSNCIYKLLDQVPTTTLVEKYSHVVLDNSVRFFEFLKTFFTSAY IHLKNRTFFSQNALDTFKCEKLHRQSYDAEFLKTVGYDMKSTMEDSFLTVNAPEPLNV FVSAGVTDIYSQVFTVLNMLHTALDAVIETRNSETLKHEPRLRYAFFHMNTTVFAIRK NMLTLIEAASETLKKTLDFKKSYESRSSHELLNVCYRAHRKFIREVAGALMLNSKRGT TARVIKLMVSSVSLASKACVQGDAVGAEKQYQLFQSHLLIFLDQCRLDHSRYPLYRSL EIGIDEVDGRKSRSSSYSDDISCRSY" CDS join(936424..936555,936721..936828,936901..937090, 937137..937316,937366..937985) /gene="CBG09990" /locus_tag="CBG_09990" /standard_name="CBG09990" /product="Protein CBG09990" /note="contains similarity to Pfam domain PF01238 Phosphomannose isomerase type I contains similarity to Interpro domains IPR016305 (Mannose-6-phosphate isomerase), IPR001250 (Mannose-6-phosphate isomerase, type I), IPR018050 (Phosphomannose isomerase, type I, conserved site)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XA43" /db_xref="InterPro:IPR001250" /db_xref="InterPro:IPR011051" /db_xref="InterPro:IPR014710" /db_xref="InterPro:IPR016305" /db_xref="InterPro:IPR018050" /db_xref="UniProtKB/TrEMBL:A8XA43" /protein_id="CAP29510.2" /translation="MLLKLKCTVNNYAWGAKGEASMAGNLALDGGHIANLETDKPYAE FWVGTHANGPARVIENNIALKDYFLLHPTYKESMKMVLSVVAPLSIQIHPTKKQGKVL HAKDPKNYPDDNHKPEIAIALTEFELLSGFRQHSQICEYLKLYSEIQELLTEEEKSQI DNLGSFGESSSQVLKKIFSRIWRTPKEKLQTVVDKLARRIQGQENKSALDEIIVYLFT MYPGDVGVFAPIFLNYFKLQPGEATFLEPNMPHAYLKGDCVECMADSDNTIRAGLTPK YIDVESLVEMLNYTETLLPKYIPNELDDGTLLFTPRGIDEFWVQEVKGPSGSIYQLPY SESCSVLTILYGTATVTLGNSSQTLNRGEVLFVGATHSTSERPKVNISDDFLAFRAFT PSPRALESLSNKNLIID" CDS join(938388..938441,938488..938592,938640..939017, 939061..939348,939417..939641,939688..940101) /gene="Cbr-riok-3" /locus_tag="CBG_09991" /standard_name="CBG09991" /product="Protein CBR-RIOK-3" /note="C. briggsae CBR-RIOK-3 protein; contains similarity to Pfam domain PF01163 RIO1 family contains similarity to Interpro domains IPR000687 (RIO kinase), IPR018935 (RIO kinase, conserved site), IPR017406 (Serine/threonine-protein kinase Rio3), IPR018934 (RIO-like kinase)" /note="Predicted" /db_xref="GOA:A8XA44" /db_xref="InterPro:IPR000687" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017406" /db_xref="InterPro:IPR018935" /db_xref="UniProtKB/TrEMBL:A8XA44" /protein_id="CAP29511.1" /translation="MANCDNNPWKKNAWGKTEKKADEPIVSFVDVMSEEYIEGMGNQE KLEEERYMKQLEQMFGDTSTSDEQFTLNTEGMTDEEVALALQRHFDREADVARAVASS SSVHFAPDRYHPKTMQETDSEDEDDDALRQAATDMLYAKLDAENASESRLRPEGPSTS RTKHDTGVSGRRNADKTFNDRNSLPTGDMVGDKINNKVFNKLMAFGKSEAKRQMRHKD KEEKATMDTSVDSDTRLLLLKWINQGVFDSVDGIIATGKESAVLHAAQDSATSYAIKN PRGVLKIWAEREFMNLSRMAKHGLPCPQPVKVRRNVLVMSFLGDDGLAAPRLKNVEWE FFTDEERRSVYDQVQTIMCRMYKECLLVHADLSEFNLLLTPDNKVHVIDVSQAMDLSH PRSLQFLTRDIQNVIAFFTKIGVPNLPTYVQLFNLITDLEMVEDHDLLVQVEQFSEEN RSADLRHDKSRPADMELKKYNEEKKANRGISPARDYN" CDS complement(join(940161..940208,940348..940539, 940607..941539,941588..941869,941921..942007, 942058..942192)) /gene="CBG09992" /locus_tag="CBG_09992" /standard_name="CBG09992" /product="Protein CBG09992" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR000980 (SH2 motif), IPR008266 (Tyrosine-protein kinase, active site), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8XA45" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR020635" /db_xref="InterPro:IPR035849" /db_xref="InterPro:IPR036860" /db_xref="UniProtKB/TrEMBL:A8XA45" /protein_id="CAP29512.1" /translation="MTSVNFEEKISKWLVDQRCYHGFLPREDLPYVLKKKGDYIFRVT ERKVGKDRKRDIVLSLAWPTEPVPMITNKDIKNFLIERNANTVWLELNMYFHSIEALY SHYKTNEIVNKNKERYKLIRPAGLFSWEFKHSQIVLVKKVGQGAYGEVYKGRVKKGNK TFDVAIKAMRRDLDAGDEKMKEVMAEARLMRSLNHPNIVRCRGIAVLEQPVYIVIDFI TGGGLDSFLKKNGKTLSMDEKNKMAISAAWGIEFMHSHDIIHRDIAARNCLYDKKNLV KLSDFGLSRKGSSYRMKKAMKMPTKWLAPESLTTFTFSRASDVYTYGVLLYEIYTCQE PYMTVNAGEARRLILSGTFPNFSKHAPPELNEIIKKSVYQLDPLKRATMKDIVKQLEG WLEVELVLDEDEKPDVDAESNRNNVTADESQGSKVKPFSMVQVAPPTQVSQPLPPPPP PAQPTVIAPPTPRRASKEEELAKSKKKEHKRDGSLERAAKVKDKDKEPSIEVPNASEP MSVANKMMSSNARGSDELLTPPDEETKPSSKETEPINIHNKPKKETKKNE" CDS complement(join(942399..943061,943100..943523, 943571..943702,943749..944422,944469..944777)) /gene="CBG09993" /locus_tag="CBG_09993" /standard_name="CBG09993" /product="Protein CBG09993" /note="contains similarity to Pfam domains PF00035 (Double-stranded RNA binding motif) , PF00498 (FHA domain) contains similarity to Interpro domains IPR001159 (Double-stranded RNA-binding), IPR000253 (Forkhead-associated (FHA) domain)" /note="Predicted" /db_xref="GOA:A8XA46" /db_xref="InterPro:IPR000253" /db_xref="InterPro:IPR008984" /db_xref="InterPro:IPR014720" /db_xref="UniProtKB/TrEMBL:A8XA46" /protein_id="CAP29513.2" /translation="MSDDGAFKSPSIPASHHIPEKPSPSSPKKIGLVTEQIEGPVEGA IDEVEVILNGARFLNFLSFQTAEVEAEKEAKISVQAPTLHYEAPPWACEPDPEHKFQL EVLKEGKLIGAFDLSSRKNSTFVVIGRIKPGCDLVMEHPSISRYHCILQYGDDRMSKT GKGWHIFELGSTHGSRMNKKRLPPKQYIRTRVGFIFQFGDSTRMFNLVGPEEDSEPEW DCSPTEMKLRKHKKELEAKLRAAAAQEMAEDEKRAQEEEGCGWGMDYGEDQKPLTTVE TDAHLMEDREAYYNQDPKKALQKFFEREGFDMNFEFSEQGQGHTHKWVCSIELPVEID GVDRAFTASATVSTSKKDAQIQCALEACRILDTYNVLRKSNTKLRMQRKTLEANDYYD EDDDLYLDRTGQLEKQREKRKQWAEEGYGHKRPEVDTYESLCAKLEASKKEIEDCQKH LDILNSETRKSTAAKESGGDVLDNYIRQLEKSGGGDDPKVTKITINIYSKQIIFRLKW KNRNGLEKLVKIAKPAAVKGVDQLGTAGGDKQAFLKKLMGVRARKEVDQAPSQPGPST PTVTSTPPTSKMNETKNEVSEKLEDAKKEEEKVRPDVETKKVTEDSEVKEKKDEKKAE VSVKKEEEEEKPKEAFGSKIQKRVAEWEDELKAENEALAKKQKLEAESETKKKAQRIR QRDIEKKIAGTEDYGAGVEDREEKYSTWMPPNAEQSAAKQDALRAKFAGKY" CDS complement(join(945062..945239,945287..946730, 948283..948568,948626..948914,948961..949196)) /gene="Cbr-mcm-6" /locus_tag="CBG_09994" /standard_name="CBG09994" /product="Protein CBR-MCM-6" /note="C. briggsae CBR-MCM-6 protein; contains similarity to Pfam domains PF00493 (MCM2/3/5 family) , PF01078 (Magnesium chelatase, subunit ChlI) contains similarity to Interpro domains IPR018525 (Mini-chromosome maintenance, conserved site), IPR000523 (Magnesium chelatase, ChlI subunit), IPR001208 (Mini-chromosome maintenance, DNA-dependent ATPase), IPR008049 (Mini-chromosome maintenance complex protein 6)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:Q61J08" /db_xref="InterPro:IPR001208" /db_xref="InterPro:IPR008049" /db_xref="InterPro:IPR012340" /db_xref="InterPro:IPR018525" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR027925" /db_xref="InterPro:IPR031327" /db_xref="InterPro:IPR033762" /db_xref="InterPro:IPR041024" /db_xref="InterPro:IPR041562" /db_xref="UniProtKB/Swiss-Prot:Q61J08" /protein_id="CAP29514.1" /translation="MDNIISGQAQKVEDVDGTRVQNEFSKFLKSFKGDKNELQYKTAM KELVQPEKNTIFVDMQHLYKFSNNLATTIELQYYRVYPFMCEALHLATLDGCDENERQ QMFKKQLYVSLYNLDAKTKVRELSADKVGGLVRIAGQIVRTHPVHPELSRACFVCEDC GVSTRDVQQQFRYTQPTKCANPQCMNRTRFSLDVNSSTFVDFQKIRIQETQAELPRGS IPRTVDVIVRGEMVETVQPGDKCDIVGTLIVIPDIAQLSTPGLRAETSNQNRGRATDK SEGITGLKALGVRDLTYKMAFLACHIQQTESLVGGDASGAMEENDYLELWTKMSPEDR SVLKQMSDDKKIEKNIVDSLFPNIYGNHEVKLGVLLMLLGGVAKKSKDEGTSLRGDIN VCLVGDPSTAKSQVLKAVEEFSPRAIYTSGKASSAAGLTAAVVKDEESFEFVIEAGAL MLADNGVCCIDEFDKMDVKDQVAIHEAMEQQTISITKAGVKATLNARASILAAANPVG GRYDRSRPLKYNVQMSAPIMSRFDLFFVLVDECNEVTDYAIARRILDNHRSISEHTER NTVYKIDDIKKYIAFARCFKPKISDKAAEALVREYKKLRMSDSNNAATSSWRITVRQL ESLVRLSEALARLHCGKEVLEQHVEKAAELLNKSIVRVEQPDIALDEDDFDNNIVIVE ANKENQGGDDDMEHDGEKDETAKVDPAKLKISFKEYKQLSDVLVLHMRADEESQGEEE YDGVKQSALVEWYLTTIEGEMETEEDFNVQKTVCERVIHRLVHQDHILLEVEPGEDPT LCVHPNYVVSDE" CDS join(946980..947097,947144..947257,947304..947476, 947522..947629,947677..947958,948004..948216) /gene="Cbr-srxa-10" /locus_tag="CBG_09995" /standard_name="CBG09995" /product="Protein CBR-SRXA-10" /note="C. briggsae CBR-SRXA-10 protein; contains similarity to Pfam domain PF03383 Caenorhabditis serpentine receptor-like protein, class xa contains similarity to Interpro domain IPR005047 (7TM GPCR, serpentine receptor class xa (Srxa))" /note="Predicted" /db_xref="GOA:A8XA48" /db_xref="InterPro:IPR005047" /db_xref="UniProtKB/TrEMBL:A8XA48" /protein_id="CAP29515.1" /translation="MSVDPAVVKRISLWVYEAASAFNIFYCITLSLAIKTSKNKSLPA TYIYNMAISNALLVMFGVAVYILPYYMSDKTYKIYRDTIGPQISVGVTFLYLHPMLTL ILMTINRIAVVLSMQASKLFTSNKIWFYTSLHMIANFICLLIPYLSECQINYDQRAVG FMSECAPKRHPITTFSNYYSVFFPFVAFFFNVLVIINFKLQRSPTYAKIKRILRGGKE DQFATTMPSDVLKAKKKTERMLMIQAFITAFYLSVYELTSLVLRVAPEIFSSLSLDGK MAFTYFRLAQIPCHVFLVYFIFTPVTRKIYLDFLRQRVFCMKPAKKTIKVSTTSTSTR K" CDS 950238..950444 /gene="CBG25903" /locus_tag="CBG_25903" /standard_name="CBG25903" /product="Protein CBG25903" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHL3" /protein_id="CAR99414.1" /translation="MEKMNHLENQISELNAKIEDMKKNGMTGLNVNGGENTYSPGGSV VSAEEKERKRSIIVTGIPEYGRSE" CDS join(957326..957365,957399..957471,957518..957607, 957658..957937) /gene="CBG09996" /locus_tag="CBG_09996" /standard_name="CBG09996" /product="Protein CBG09996" /note="Predicted" /db_xref="GOA:B0K078" /db_xref="InterPro:IPR022559" /db_xref="UniProtKB/TrEMBL:B0K078" /protein_id="CAP29516.4" /translation="MMSKLTVWGPSITVTTQSYNDVICRRPWYFNSPRPAPLRCPTPS FFTYYECCGEFLGNCCWRFRQEPIIICVILIVLLLLVCCCCCIAWCVVGRKKSTSCVA PERKKTTTTKKDSQIQTVSSSTIDSGTQWELRRGYEESEKRRSYAAARDRDLDYQYFS " CDS join(961412..961510,961707..961815,962287..962448, 962494..962679,962721..962905,963582..963725, 963785..963817,963868..963966,964011..964109, 964160..964366) /gene="CBG09998" /locus_tag="CBG_09998" /standard_name="CBG09998" /product="Protein CBG09998" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XA49" /protein_id="CAP29517.2" /translation="MASSAGREKLRSRGQRVFAFGSSTPRDLSHMNKIPPKLRSYDAK SVEKPAVDAPSLHDYIVKARSLSREAGDTRNQFVFGSSTPRTLAHLDKIPHKQRVYDA KIPKKSATHSDFKAAPIRFTPPTVPITKPVKKEENRHVITSKDDDIASEPDFVQDREE FLNEMKKHKKELEKKKSLGKTGEFSYSKNPMEIQSPTAAETHQENVKFAHAPEISGNV QKAVRIHAETQEEPAVATKNLSANKMNDQIEVSQLMNEITPESVPAIAESPDNQKPAN VVGDLLAKVQKVAEETVDKTKNTIGADVAKTIEKTENDIAKKVDQVVKEGKSSVGEIK TDVENNIAEKVDDITKSLEKTAKSLEETSEKLGSKIETTASEIKPKLENASKDVISDV MKSGEKLIGDVTSEFKKALESSDHKVDSTKIGSSAEDDVKNGLNLRHF" CDS complement(join(964639..964768,964818..965321, 965370..965643,965700..965831,966249..966330)) /gene="CBG09999" /locus_tag="CBG_09999" /standard_name="CBG09999" /product="Protein CBG09999" /note="Predicted" /db_xref="GOA:A8XA50" /db_xref="InterPro:IPR000261" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR039656" /db_xref="UniProtKB/TrEMBL:A8XA50" /protein_id="CAP29518.2" /translation="MEGKFSMDSQILEEVIRSGNIPCHGRTGMLCAGGGLLPPALLDE SRVPKFYLDALVACGGTTSSALPNTGLVYNLMGTSGLPKDVLSHIWSAVNRAKPGQLT RPEFFSLLALIALAQKGESLAALCAMNSLPIPYLNPVQAFPTACNPAPTVNTSSSFVP FGKIKPSAFIPTSLLPRRSMRKKKDTDSKEASAHNSPAKSGAQDLAGLDFSNDISDIM EDIKDANETPNQQCWRETVHAIYIVVEEANQLFKDVKKDVILEILETEKGENYFKSLA KTFETLERVCKSAGVLLSTQSTKEAEYCRNLKRKWEPFFGEASADVNVEQCTDDRKCV ICCQPVQNPIDYGGQCFDVACANLWVNGVSSTLPSLHLK" CDS complement(join(966887..966937,966984..967222, 967270..967465)) /gene="CBG10000" /locus_tag="CBG_10000" /standard_name="CBG10000" /product="Protein CBG10000" /note="contains similarity to Pfam domain PF00137 ATP synthase subunit C contains similarity to Interpro domains IPR002379 (ATPase, F0/V0 complex, subunit C), IPR011555 (ATPase, V0 complex, proteolipid subunit C, eukaryotic), IPR000245 (ATPase, V0 complex, proteolipid subunit C)" /note="Predicted" /db_xref="GOA:C0HLB5" /db_xref="InterPro:IPR000245" /db_xref="InterPro:IPR002379" /db_xref="InterPro:IPR011555" /db_xref="InterPro:IPR035921" /db_xref="UniProtKB/Swiss-Prot:C0HLB5" /protein_id="CAP29519.1" /translation="MSYDLETAEHAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGI CSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVQAASAGYDLNKGFAHLAAG LTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGT S" CDS complement(967837..968337) /gene="Cbr-vha-1" /locus_tag="CBG_10001" /standard_name="CBG10001" /product="Protein CBR-VHA-1" /note="C. briggsae CBR-VHA-1 protein; contains similarity to Pfam domain PF00137 ATP synthase subunit C contains similarity to Interpro domains IPR002379 (ATPase, F0/V0 complex, subunit C), IPR011555 (ATPase, V0 complex, proteolipid subunit C, eukaryotic), IPR000245 (ATPase, V0 complex, proteolipid subunit C)" /note="Predicted" /db_xref="GOA:A8XA52" /db_xref="InterPro:IPR000245" /db_xref="InterPro:IPR002379" /db_xref="InterPro:IPR011555" /db_xref="InterPro:IPR035921" /db_xref="UniProtKB/TrEMBL:A8XA52" /protein_id="CAP29520.1" /translation="MVSEEVTAGIMQAEQAMYGPFFGSLGVTAAMAFAAAGSAYGTAK AGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVAVIVSGKVEPAGPNYTINNGFS QFAGGLVCGICGLGAGYAIGIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVA LILGAT" assembly_gap 969172..970171 /estimated_length=1000 /gap_type="between scaffolds" CDS join(970605..970937,970984..971286,971334..971998, 972047..972415,972461..972812,972874..973006, 973076..973227) /gene="CBG10002" /locus_tag="CBG_10002" /standard_name="CBG10002" /product="Protein CBG10002" /note="contains similarity to Pfam domain PF04100 Vps53-like, N-terminal contains similarity to Interpro domain IPR007234 (Vps53-like, N-terminal)" /note="Predicted" /db_xref="GOA:A8XA53" /db_xref="InterPro:IPR007234" /db_xref="InterPro:IPR039766" /db_xref="UniProtKB/TrEMBL:A8XA53" /protein_id="CAP29521.2" /translation="MEEPNDLNLSDTVMSEIKGMCVTEYSKPNMSLIAQINELFPTEQ SLTQLDSVIAAVEGEIGELDNELAYLVETNANVSERGEEALKHAQKAMVELEKSIGSI RERTKSSDEIVREMTRDIKQLDIAKRNLTASITTLHHLHILLTGVESLGAWVEKKDYS SIARQLPAILNVLQLFDAYKESEQIANLSEQLDKFKSSLTIQLARDLKNAFQTGQLSD RITDMCRVAAALEGNVKENFVKWFIEQQLSEYCIIYADNEEGAWLDKVDDRYKWFVRK LTDFERAGLSNIFPNDWHMGRRLTSEFCIVTRDILYRIMTRRRQDLDWKLLGHAIQHT KMFEALLTKRFPEKDGISFEKTIWSVFDPFLDVFINAQEKTLNEFLDTCASKIRSGEE KPTRESSTHAVPFPSSADMFLLLKKVITESSKLSSEPDALIRDVIGVVRVCLRGYATS CLIAFLPSLGSQQSGAANLFSLIREEVAYPRLTPDQQFLVCCILATADWCAETSIQLQ EKLAQRIPGVDITQETEAFYSITNQSLLVLVQDVESTCDAALQSISKVNWSSVDCVGD ESPFIGAMRAHLRQAVPLVRDMLSDRRKYFAHFCLKLATQLAHKFVGSLFRCRAISTH GAEQLLLDTHSLKTFLLSVPSIDSVINSKPPTAYVTSVNAALTKAEMILKFGYGFSTV EQYIKLLPASDAAEMQNVLEMKGVKRQEHSSVLNTYRALPTVGSAASVSEAFNAVLSL AADGLSDQTVTSSIDKLKRFERLVKRQL" CDS join(973666..973968,974016..974226,974272..974570, 976183..976236) /gene="Cbr-ech-6" /locus_tag="CBG_10003" /standard_name="CBG10003" /product="Protein CBR-ECH-6" /note="C. briggsae CBR-ECH-6 protein; contains similarity to Pfam domain PF00378 Enoyl-CoA hydratase/isomerase family contains similarity to Interpro domains IPR018376 (Enoyl-CoA hydratase/isomerase, conserved site), IPR001753 (Crotonase, core)" /note="Predicted" /db_xref="GOA:A8XA54" /db_xref="InterPro:IPR001753" /db_xref="InterPro:IPR014748" /db_xref="InterPro:IPR018376" /db_xref="InterPro:IPR029045" /db_xref="UniProtKB/TrEMBL:A8XA54" /protein_id="CAP29522.1" /translation="MMRFSSMLVRNVRLCANANQMQVAAFSSKAPEMIKVEKVGEKQN VALVKLNRPKALNALCAQLMTELSDALQNLDTDKSVGAIVITGSERAFAAGADIKEMT NNEFASTFSGSFLSNWTAVTDVKKPVIAAVNGYALGGGNELAMMCDIIYAGEKARFGQ PEINIGTIPGAGGTQRWARAAGKSFTMEVCLTGNQVSAQEAKDRGIVSKVFPVDQVVG EAVKLGEKIADQSPLIVQMAKEAVNKAYELTLQEGLHFERRLFHTTFATKDRKEGMTA FAEKRKPQWESK" CDS complement(join(974624..974676,974772..974869, 974912..975281,975324..975432,975483..975582, 975630..975733)) /gene="CBG10004" /locus_tag="CBG_10004" /standard_name="CBG10004" /product="Protein CBG10004" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XA55" /protein_id="CAP29523.1" /translation="MSKRQSRPLFIHEGFLLRQQKSLADGTELLYCDKRQTLGCTASA RRVNGHIFMRTGHILHEADEEFANTKLAKHALKQIAANTTCSPKKLIDELQSSLGPIS LGASRLALTRMIHRARQTTAEPNATVKLEQKPELLEDHADVSDDLPDANIGELLQNII KQEEPEEETEMTQSSSSNINHSHQTITIPVGSFFETLQDIVRYNVQESNQSVVEQITN VVNEPKRHSSEQAKKISSNDVNNCIKDFLVNMQNFASGGISDGTTYQFGRCTGSNTEQ P" CDS join(976770..976881,977217..977344,977395..977483, 977528..977697,977750..977934) /gene="CBG10005" /locus_tag="CBG_10005" /standard_name="CBG10005" /product="Protein CBG10005" /note="contains similarity to Pfam domain PF01121 Dephospho-CoA kinase contains similarity to Interpro domain IPR001977 (Dephospho-CoA kinase)" /note="Predicted" /db_xref="GOA:A8XA56" /db_xref="InterPro:IPR001977" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8XA56" /protein_id="CAP29524.2" /translation="MLVVGLSGGVATGKSTVSSVFRAHGVPIIDADQIARQVVIPGTS TYKKLRKEFGDEYFDDEQGGVLRRDKLGKLIFNNPEKRKALNGITHPAIRWEMFKQFL TLLFTGTKYIVFDTPLLFESGYDKWIGTTIVVWCDFEKEVERMMKRDNIPRADAESRI HAQMDIEEKKKRAKIVLDNNGNIDELREKVKEVIIQMEKSWKPYIYRVIFGLILGVVP YYALKYIRS" CDS complement(978763..978864) /gene="CBG10006" /locus_tag="CBG_10006" /standard_name="CBG10006" /product="Protein CBG10006" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XA57" /protein_id="CAP29525.2" /translation="MDRADLYEKNEAVAQQRRDVVNYYFSGESCEFP" CDS complement(join(979415..979543,979591..979917, 979966..980121,980167..980373,980417..980578)) /gene="Cbr-cdk-1" /locus_tag="CBG_10007" /standard_name="CBG10007" /product="Protein CBR-CDK-1" /note="C. briggsae CBR-CDK-1 protein; contains similarity to Pfam domains PF01163 (RIO1 family) , PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR018934 (RIO-like kinase), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XA58" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/Swiss-Prot:A8XA58" /protein_id="CAP29526.1" /translation="MTAIRKNDMNYTLDDFTKLEKIGEGTYGVVYKGRNRRTQAMVAM KKIRLESEDEGVPSTAVREISLLKELQHPNVVGLEAVIMQENRLYLIFEFLSYDLKRY MDTLSKEEYLPSETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDEKGAIKLADFG LARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQG DSEIDELFRIFRILGTPTELEWNGVESLPDYKATFPKWRENFLRDKFYDKKSGNYLMD EDAFSLLEGLLIYDPALRISSKKALHHPYFNDIDTSKLPAGNYRGELQLE" CDS join(981961..982089,982135..982287,982398..982538, 982586..982651) /gene="Cbr-iff-1" /locus_tag="CBG_10008" /standard_name="CBG10008" /product="Protein CBR-IFF-1" /note="C. briggsae CBR-IFF-1 protein; contains similarity to Pfam domains PF01287 (Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold) , PF00467 (KOW motif) contains similarity to Interpro domains IPR001884 (Translation elongation factor IF5A), IPR020189 (Translation elongation factor, IF5A C-terminal), IPR005824 (KOW), IPR019769 (Translation elongation factor, IF5A, hypusine site)" /note="Predicted" /db_xref="GOA:A8XA59" /db_xref="InterPro:IPR001884" /db_xref="InterPro:IPR008991" /db_xref="InterPro:IPR012340" /db_xref="InterPro:IPR014722" /db_xref="InterPro:IPR019769" /db_xref="InterPro:IPR020189" /db_xref="UniProtKB/TrEMBL:A8XA59" /protein_id="CAP29527.2" /translation="MSEDHHDEEQFESAESGAAATFPKQCSALRKNEHVMIRGRPCKI VEMSTSKTGKHGHAKVHLVAIDIFTSKKLEDICPSTHNMDVPVVKRREYILMSIEEDG FCSLMDPESCDLKDDLKMPEGDLGNSIREALEKDDGSVLVQVVAACGEEAVLGYKIST KE" CDS join(984837..984943,985013..985116,985160..985243, 985718..985878,986871..986999,987045..987514, 987792..987859,988247..988380) /gene="CBG10009" /locus_tag="CBG_10009" /standard_name="CBG10009" /product="Protein CBG10009" /note="Predicted" /db_xref="InterPro:IPR000742" /db_xref="UniProtKB/TrEMBL:A8XA60" /protein_id="CAP29528.1" /translation="MNSRISLFLLMFAFNVGLINCGGQSLVSPQSHCRIRCENGGMCV YDLERPDFHSCICLLGVFTGDRCQVKVPTPEDMETTTTESKVEEAPAHPKNLQQQSEV DREEARRRDEERKREYERQVAERTRKEKEDREKAADEERRRQQHEQYWREETARREQQ RAEAERRIQEQRARDDERRRQHESERAQLEERRKEEESRRLAAQRETEEARLREEERR RQESEMTAQKEMENKKTESMNEQFEYEGDEDYPQVAEKEDEYDEGYETDKTDDDVEKT TTASTNKMKPMVEEKKEIMGEGDDGSDMVMEKDEMEDQESETNDEEHLRKENEKLIDS IKHVFNKAVDETVKEHPIEDDEYWDESAKKMDEDATPKTEEADEYGMEEGTEGWMMVK KENENGSFEYSVSLAFLLSSIIYFFN" CDS join(988871..988933,989188..989736) /gene="Cbr-hlh-4" /locus_tag="CBG_10010" /standard_name="CBG10010" /product="Protein CBR-HLH-4" /note="C. briggsae CBR-HLH-4 protein; contains similarity to Pfam domain PF00010 Helix-loop-helix DNA-binding domain contains similarity to Interpro domains IPR015660 (Achaete-scute transcription factor-related), IPR011598 (Helix-loop-helix DNA-binding)" /note="Predicted" /db_xref="GOA:A8XA61" /db_xref="InterPro:IPR011598" /db_xref="InterPro:IPR015660" /db_xref="InterPro:IPR036638" /db_xref="UniProtKB/TrEMBL:A8XA61" /protein_id="CAP29529.2" /translation="MPMVVAKRNARERTRVHTVNQAFLVLKQHLPSLRQFTKRVSKLR ILNAAISYIETLLKLLQSSDTVPSSVINATLGPIIPTPVRIAQKIKQPEPRPPQPILP RQPILTSAPAPIATCAPDHSLVDYRPSLPSSFQTVQPVQMPSVFSPQPTFPYMKTLLD YPTYFYQPSTVPPPPPPPNPSQSASSHLIVNNPLVPIPSYQCF" CDS join(990285..990384,990429..990619) /gene="Cbr-dao-6" /locus_tag="CBG_10011" /standard_name="CBG10011" /product="Protein CBR-DAO-6" /note="C. briggsae CBR-DAO-6 protein ;" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XA62" /protein_id="CAP29530.1" /translation="MWKKSLSVYKKVDEVADKDNSNQQNTFNYQKLTDSEIMPKQQNK EKRKSSSYSHSSTTSTSSSTCPSTKRYTSSQQSFAFVPPIFPVVPQKFVFFG" assembly_gap 995270..995279 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(997286..997431,997480..997605,998356..998464, 998512..998624,998681..998813) /gene="CBG10012" /locus_tag="CBG_10012" /standard_name="CBG10012" /product="Protein CBG10012" /note="contains similarity to Pfam domain PF01705 CX module contains similarity to Interpro domain IPR002619 (Domain of unknown function CX)" /note="Predicted" /db_xref="GOA:A8XA63" /db_xref="InterPro:IPR002619" /db_xref="UniProtKB/TrEMBL:A8XA63" /protein_id="CAP29531.1" /translation="MKWWSTWMIPLLLLIFMYYECDAKKGGRGSSSSAVGRHYSRSKS YFTRKFSKPGSIEHTSSFRSFVFGATSGLLLFNAGRHIIQDSSVPISFGNRKYYWGEP KYVPDEELPVQCINKIDPQDPQFGRVFFDNESRPQEIVYACPADNNCCGYDCCTESTI FTSIFGLLVILLIVSVISIFVIEGFRWCLHFTYFCKHGHARDFEPLSI" CDS join(1000071..1000377,1000425..1000796,1001294..1001397) /gene="Cbr-clec-162" /locus_tag="CBG_10013" /standard_name="CBG10013" /product="Protein CBR-CLEC-162" /note="C. briggsae CBR-CLEC-162 protein ;" /note="Predicted" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:A8XA64" /protein_id="CAP29532.2" /translation="MKSTLVRPVSFIRNQQLQQAAIKLGIEEYWIGASNVDNDWEWLD GSMLTYSNFDVLGGYPKKTESQIGAVSMGSLSGLWYTKHDSMMLPFVCEFPLSNQYDN GMLYRAPKLQSLIFPSAGTKAPMLMVDSVDQSVLFEKIGPKKNEMETGEKVYLKPINI STAGMSGFEGQPIVMLNTFKRKIKVKPVIVSQTETELARSLKEKEEVEDSVNLKSVKT GGVGNGGNGTSLSEELNSNSKAKREREESELLRSKTIQISRG" CDS join(1003732..1003891,1005665..1005765,1005815..1005946, 1005994..1006276,1006328..1006513,1006691..1007112, 1007155..1007272,1008902..1009026,1009579..1009820, 1009863..1010157) /gene="Cbr-ncx-7" /locus_tag="CBG_10014" /standard_name="CBG10014" /product="Protein CBR-NCX-7" /note="C. briggsae CBR-NCX-7 protein; contains similarity to Pfam domain PF01699 Sodium/calcium exchanger protein contains similarity to Interpro domain IPR004837 (Sodium/calcium exchanger membrane region)" /note="Predicted" /db_xref="GOA:A8XA65" /db_xref="InterPro:IPR004837" /db_xref="UniProtKB/TrEMBL:A8XA65" /protein_id="CAP29533.2" /translation="MAQSITFLYSILIILISLQSSDAIFLNSLFSTQDGSNLCNADKC ELKSNWSHQAVCDYVNCNDDACEGGGYLLWTQYVECAPNTTSRVFIIIAAVLYMLLLF LMVSSAADDYFSPSISSIVAHLRISESVAGVTFMAFGNGAPDVFGSIASVLSSPTPKA DLALGELFGGGLFVTTMVVSTIILTSPFDVEVFSTIRDLLFYLVALSFLGFCFIFYNR VTLWMPLTFLGLYLLYVLTVIGAQYYHNRKRKAIQQQNSVKSRASRRSRKSLHSVAPM PVIPEIEVQEQSAPFPEISVVTGAIDKLKEHMTEKAQERPVRRYTKRPSFLVNGEGNL NHLHPYAKQNHLGTSRRQSELSNEDEEFVVIHGQVYQGHEARSRAASLVPEPRKISSW QNFDVLTDLAEHLDPRPDAEDWEEMNIFSKVLSYINVGPNFLFKLTIPLNEQSWSKPL TLIHAFTCPAFLLFSLQFFLKSPFSGSPGLWLYGLAVSIVIAALLIFFTELGVQPKYY KEIYSYAGFIMSIAWIYLISSEVVNVVTMLGVVSRVSHEVLGLTILAWSNSIGDLIAD VSVVKQGYPRMAMAAAIGGPLFSEFAHGIWTTIHYCKTTRKIHFGEFHSPVFLENILF QMTINPTYRLLILFLAISLLATLIGIPVQKFRLQRPHAAVLISIYIAFIVFVLLSETG VLVWN" CDS join(1012697..1012880,1013703..1013935,1014038..1014217, 1014262..1014364,1014414..1014760,1014809..1014926, 1014969..1015093,1015139..1015376,1015424..1015485, 1015533..1015602,1015649..1015767) /gene="Cbr-ncx-6" /locus_tag="CBG_10015" /standard_name="CBG10015" /product="Protein CBR-NCX-6" /note="C. briggsae CBR-NCX-6 protein; contains similarity to Pfam domain PF01699 Sodium/calcium exchanger protein contains similarity to Interpro domain IPR004837 (Sodium/calcium exchanger membrane region)" /note="Predicted" /db_xref="GOA:A8XA66" /db_xref="InterPro:IPR004837" /db_xref="UniProtKB/TrEMBL:A8XA66" /protein_id="CAP29534.2" /translation="MQKWIWAYLILVLVLKECDGWQADLGKMVRKWKVAGGEAATEEC VSDDGDQCTIQGNWSSTQVCNYVMCNDDNCEGGGYLLWTRYVECASTPAIRIVLIVAG VLYMLLLFIMVSSAADDFFSPSISSIVAHLRISESVAGVTFMAFGNGAPDVFGAIASV LSSPTPKADLALGELFGAGLFVTTMVLAVTIFSKPFKAEVFSSIRDIAFYLVALAFLA ICFIFYDHVEIWMPITFLGVYLIYVCTVILSQILHNRHKKERKATEIVKPIDVISVIS LDDDEDIYISHGHHILHAHEVEKIEAATEEAEILKTWSIGGVLEDLMEHLKPWPNEED WNEMNVFQKAICSVNIIPTFFFKITIPHNEKPWSKPISLLHCLICPVFLLFCIQVCSI SPFPNSPGLWLYGLILSVLLLALVSVFTELQKEPEFYKGIASYAGFLMSIAWIYLISS EVVNVVTMLGVVSRVSHEVLGLTILAWSNSIGDLIADVSVAKQGYPRMAMAAAIGGQL FNLLIGFGLPFTIAKVQGKSISMIINPTYRLLMLFLGISLVFTLIAMFAQKFFLRRPH SYCLAFIYIAFFVFIGLSLDGLLVWN" CDS complement(join(1016638..1016709,1016761..1018371, 1018422..1018923,1019017..1019240,1019289..1019597, 1020077..1020236,1020693..1020699,1021661..1021721)) /gene="Cbr-tlk-1" /locus_tag="CBG_10016" /standard_name="CBG10016" /product="Protein CBR-TLK-1" /note="C. briggsae CBR-TLK-1 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XA67" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/TrEMBL:A8XA67" /protein_id="CAP29535.2" /translation="MSYRPLCCLPAALVMHRLWVTFICSFFHLFTQSIFSLLQVQSNG SSSNHAPIVGDQLGVPSITMATGGTGHVGVSYNVTYMNSGMLGPTGFMQQNAHPSTSV MMQQPQNGGVSRSSPTEMPQGMQTMSEDSLEMRDYNSGVHHMHPHQMQMQHHMQPQQQ YNMQYHNHQQMQQMQHYHQQQQQYQQQAQHHQMYPPQIQQQQPQQQGQMQQPQQSNQQ QQSSTTLQHINESSNLSSAGSISDREPEQAGGTPQRPTAPVTTTTTEKKSVRKRRRLG PNDEQATPKQERKITEFMKVGEASGSNVARCLMTEYHQNQGSPKRQPQQNGSNNYEPQ QHQQQHQQQQQQQQQNQMNQHDMHNSYWGMATPSLGVNNRGTPTPTQQQHYSSDSNSN SNQSPPGQAGNRMVRTIDGETQTDSSLSQRLQNSNQSADEIAKRDRIIEDYRRQIDDM NTKQNAERRKYEASKETIKRLLIEKNMIERTALRDKISADSPRIGCFKTTRIGDSFRD QWTDGWGFAEIEKKQEALATEKNDINAAATLLKKRKPAELERKVDRKRPQAVSIQIQN DSNGMQPSTSSNSNGDDAIFRRPEEPKEIPPQEYTELEEIYRLRKEHLRKEETDVAME KERLDKERSLHMRELKRIANESASQFKEHQLLHKRYLMLNLLGKGGFSEVWKAFDIDE NRYVACKIHHVNKDWKEEKKANYVKHAMREKDIHKSLDHCRIVKQYDLLTIDNHSFCT VLEYVPGNDLDFYLKQNKSISEKEARSIIMQVVSALVYLNEKSTPIIHYDLKPANILL ESGHTFGAIKITDFGLSKIMEGENDDHDGGIELTSQFAGTYWYLPPETFIVPPPKITC KVDVWSIGVIFYQCIYGKKPFGHDLTQQKILECNTIINAREVIFPNKPQVNHTSLRIF HFSFVLQVSSLAQDFIRRCLQYRKEDRADVFELARHDLIRPKLPREAKGSVSGIPRSP SVNREDDNI" CDS join(1028394..1028480,1028526..1028599,1028652..1028934) /gene="CBG10019" /locus_tag="CBG_10019" /standard_name="CBG10019" /product="Protein CBG10019" /note="contains similarity to Interpro domains IPR018230 (BUD31/G10-related, conserved site), IPR001748 (G10 protein)" /note="Predicted" /db_xref="GOA:A8XA68" /db_xref="InterPro:IPR001748" /db_xref="InterPro:IPR018230" /db_xref="UniProtKB/TrEMBL:A8XA68" /protein_id="CAP29536.1" /translation="MSIATKLRRVRKPPPEGWDLIEPTLEQFEAKMREAETEPHEGKR KTEINWPIFRIHHQRSRYIYDMYYKKAEISRDLYEFCLTAKFADAALIAKWKKQGYEN LCCVKCVQTRDSNFGTACICRVPKSKLDAERVIECVHCGCHGCSG" CDS join(1029073..1029469,1029527..1029672,1029722..1029849, 1029903..1029986,1030034..1030142,1030332..1030494, 1030541..1030676,1030723..1030891) /gene="Cbr-set-3" /locus_tag="CBG_10020" /standard_name="CBG10020" /product="Protein CBR-SET-3" /note="C. briggsae CBR-SET-3 protein; contains similarity to Pfam domain PF00856 SET domain contains similarity to Interpro domain IPR001214 (SET domain)" /note="Predicted" /db_xref="InterPro:IPR001214" /db_xref="UniProtKB/TrEMBL:A8XA69" /protein_id="CAP29537.2" /translation="MGDDTYLKSIKMVSVPSFRPNSNFPQLCDKVTVGWDARRGRFVQ ATEDIPIGTVVCVEQGITVNVDQSKCYRCLKQLGDDGFAYCESCEEFYEPDAIACGDF DGLGIFKLSAHLVFSYPFLDMANLIRSNDPEIPQSAPTYLSTKDVTSVFQLTPYREIG EAFKEPPLQAAINKIVTSLEDDANWGRLEYNSRLVTFTKALRIMAERCAKNAHTIYGI DQMEAKDKKVPLGTGLFPISSIFNHSCTPNVYGFFVRNTFIFVSRGVKAGEELVDSYG VTYNQHTLQQRTYGDYLKPGSKEIEDLIVEFGKRRDAEVYTEHMFMLWKKFVENAKLR GIDYDPYLIHPYIEMVILSWNNEVECSEEEKASLLFITHRLLRNFYVGFHPVSDIIPE LVDQSAKYEINQIRNTVERLIARSRSVWEHTDYQGSQKQPENKNGMTVIHN" CDS join(1032261..1032377,1032907..1033016,1033209..1033286, 1033465..1033599,1033920..1034283,1034327..1034775, 1034823..1034979) /gene="CBG10021" /locus_tag="CBG_10021" /standard_name="CBG10021" /product="Protein CBG10021" /note="contains similarity to Pfam domain PF01062 Bestrophin, RFP-TM, chloride channel contains similarity to Interpro domains IPR000615 (Bestrophin), IPR021134 (Bestrophin/UPF0187)" /note="Predicted" /db_xref="GOA:A8XA70" /db_xref="InterPro:IPR000615" /db_xref="InterPro:IPR021134" /db_xref="UniProtKB/TrEMBL:A8XA70" /protein_id="CAP29538.2" /translation="MTNNNVPNDDVGEPDDMPVKPPKIFDFADWPFEIPDIFKRKELS YNYNYDLATSKSLMIIRMIFKWRGSLWEAVYKELIVWICAYTLVSLIYRFALTGTQKD LFERFGEYCDARMGYLPLNFVLGFFCNIIIRRWLKLYTSLGNIDNIALFVSAYVRGKD DRARQIRRNIIRYSFNSSSPKTLIFRYCVLSQCLVFRDIHVGVRRRFPTLEAIAQAGI MLPHELEKFNDIKSRYQKYWVSFNWALELLNVAKSEKSIDGDNARNAIAQEICKFRSA LTTVSMYDWVPIPLMYPQLVNMAVHTYFFLCVFTRQFFISADAHNKTEVDLYIPFMTI IEFIFYMGWLKVAMELLNPFGEDADDFDCNLLIDRNLAIGLTSVDDAYDQLPEVKPDV FVGRSVKPLDSDDTRSLKYHFGSAAQMEEISYLKKEENKMIAAGKKPNKLKLWMKSMK RKRFETSATTSYSVSFPTP" CDS join(1035291..1035427,1035833..1035974,1036020..1036235, 1037009..1037108,1037165..1037281,1037434..1037699, 1037747..1037944,1037990..1038141,1039019..1039229) /gene="Cbr-ugt-60" /locus_tag="CBG_10022" /standard_name="CBG10022" /product="Protein CBR-UGT-60" /note="C. briggsae CBR-UGT-60 protein; contains similarity to Pfam domain PF04101 Glycosyltransferase family 28 C-terminal domain contains similarity to Interpro domains IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase), IPR007235 (Glycosyl transferase, family 28, C-terminal)" /note="Predicted" /db_xref="GOA:A8XA71" /db_xref="InterPro:IPR002213" /db_xref="InterPro:IPR035595" /db_xref="UniProtKB/TrEMBL:A8XA71" /protein_id="CAP29539.2" /translation="MLYPTTKFLLLLSIFTLSDPLRILQIVPGFTNSHVLFNYRLAET LRFLGHDVKMWTQMEMAMLDTGNNKLPEGVTEYRIPIHFKDTLKTEGLKVFQSMMFES GDANDLWWTGQEFKDMRVEACEQMLKHDEKVYEDFRKEGFDVAIAHFHDLCPLAIAKK MNVKRVIWITHGTSIYDFSAVELGLRTIPSSIPHPLSSAGFFQSFSDRVQNTLWHLSL LDFVNLPQNLLIDENLFYREFVGNDQEDLWDLAKTTVPSLLINGDRMLDFPRPLPVHI AFSGELGVRKGKKAVMEKWLEEIIEKPSDGLIVFSLGTVSNTTNMPAQMINSFLGAFG KLKSYTVLWRMEKSIPGAEKYDNLHLVKWLPQKDIMRHPKMKLMIAHGGYNSFLEAAQ AGIPAVLMPLFADQKINAKRAQRFGMATVLDKLDLTVNKVYGAVMEALKPEYSKNAKK LSAMLSDQVSTEPYYALRYSLKLATSPKPSLFTLKSQHLSFSEFHNLDVLSIIVVAVL VVFC" CDS 1040807..1040836 /gene="CBG25904" /locus_tag="CBG_25904" /standard_name="CBG25904" /product="Protein CBG25904" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHL4" /protein_id="CAR99415.1" /translation="MNYLFLFLF" assembly_gap 1041580..1041949 /estimated_length=370 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(1045984..1046142,1047357..1047509,1048652..1048741, 1049058..1049231) /gene="CBG10023" /locus_tag="CBG_10023" /standard_name="CBG10023" /product="Protein CBG10023" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XA72" /protein_id="CAP29540.1" /translation="MPVAFSWISNKVNRLRSRHNMEQSKTKPDPNSFEAMFTPEVKNV VTQFLKDRMEECEPYYSVENTPEPDICKICNSRLGRFTGNACIHTKVFCRYCCYDTLY QSLEKYLCGEPEVRCTKCEAEIHTLTQRKIRRISGGSEGSGDQSDQSEGSKENEENCP VEERSMSVQDFTTSIIHAAHINRGYESTGSQ" CDS join(1057454..1057520,1057565..1058085) /gene="CBG10024" /locus_tag="CBG_10024" /standard_name="CBG10024" /product="Protein CBG10024" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XA73" /protein_id="CAP29541.1" /translation="MRLLIFLLATISMANAMALILGVGQAKRTPQPQKGDWPARFPQH PAGFDYKCKNRQFGLVTLPPAAPAQQIQRDIVDVVTKEPTTTHAPTTTTVKPTSTSTL KPTVPTTTAKPADKPTGTTFWIRSPTPPNTPAPVVRGGAAYTLGPPQAHTVKILAPHA PDKALDPFAMSSDDDFEIKPVETPKAPRKVVDPDA" CDS join(1058290..1058365,1058448..1059112) /gene="CBG10025" /locus_tag="CBG_10025" /standard_name="CBG10025" /product="Protein CBG10025" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XA74" /protein_id="CAP29542.1" /translation="MIGSTRLLIFLIATVATASAMGWFGGGGGGGHSEGCEGDWPEDF PQEPEGFKFKCRCPCKCKPKPTAASTTHAATTPSSTAISSTIATTTPSTTPTHPATQS SPPTTTSTSTSTSTSTSTTTTTKIPPSLSTTTTPSTTTTPPTPIPTKPEGTFLRGEEV PVAMDESDGGDKIESSTTFWIRSPTPPNTPFPVGGAGPALYATVKIDAAHAPDTALAP SNIPSDGDFDFQTVGTPKPPRKVVDPDA" CDS complement(join(1059340..1059448,1059492..1059582, 1059661..1059784,1059892..1060059)) /gene="CBG10026" /locus_tag="CBG_10026" /standard_name="CBG10026" /product="Protein CBG10026" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XA75" /protein_id="CAP29543.1" /translation="MLKGLLSLVTPNSKDKKRKRSSAGLSVRTAPVAETSFFSDADVS NLNETSVTLPLGEGLANTSMISTERLLADMSFSRAERKSRTTSFDFCLTDYPKDVVVH RRSLQPTTPTPNASDAEHSFIENIFDSPGQRNRMHSMIGEKIYEAGNGSPQKDLQTVS KKL" assembly_gap 1060284..1060800 /estimated_length=517 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1063259..1063384 /estimated_length=126 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(1067802..1068194,1068290..1068421) /gene="CBG10027" /locus_tag="CBG_10027" /standard_name="CBG10027" /product="Protein CBG10027" /note="Predicted" /db_xref="GOA:A8XA76" /db_xref="UniProtKB/TrEMBL:A8XA76" /protein_id="CAP29544.2" /translation="MPSSTSSSSTKSIIKSRGIKKIEKRLTATQYVRKYTEMLVLGVR RTYALERLVDAECPIRAFEENLTEKVLEKHIAPLGMYTFHLNKLAQKFDKIRRKDLIN AQRKVAESRECNAYIENQKMILEQKTQAEIQDFNLFNSNIIIFFIVFFSNVAMIQFTF FFIQVSLFISYLSF" CDS complement(join(1069125..1069174,1069222..1069594, 1069849..1069934,1069983..1070097,1070143..1070297, 1070346..1071620,1071668..1071733,1071780..1072016, 1072063..1072187,1072259..1072386)) /gene="CBG25905" /locus_tag="CBG_25905" /standard_name="CBG25905" /product="Protein CBG25905" /note="contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domain IPR001304 (C-type lectin)" /note="Predicted" /db_xref="GOA:B6IHL5" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:B6IHL5" /protein_id="CAR99416.1" /translation="MTMQRRTTIWFLLLFQPILILTDNHSDPYDCKIGSVNPLAATSL NACFKLYNTPKSYQAARRHCVSLGGQLADKINKDDSSLYSANADLEVTNGTQFWVGAS NLKCNIGWENGGEIEFNEMWAPDSRYYGVAIDKMSLGGLWHTIPVGHKLPFVCTFQGK SKDAPAPVHAMRAPAKKRVKAEKPKEDDIDESLNAALADERKKKEESLDKKKESKKDE EEINESMNAALSDEKNKSLAMAVSDKKSSSKKDESSDEEEASMSAQQSLNGSDAMSAS MSASSKTSSSDESEDETYDSAEIAMRKDIGKIAIAMKSQEMAAQSEDYDKYTEADLLS AAASLIEGKTINLNWADSRTTNTSTFDSQTDEESMSLSITLADQLAMTQQSSSKKESA SSSEDSMSESSLDQTSEQAALSMAASMKASNKNSKKSSSQDESEDIASLSMEQKAQDS AKMAMAAASESQSKSENEEESVEEADLASAATILGHGNKKPEAPKQPKKNPLTTTEEP DIDESLNAALANQRTTTHQPNLSTLLTTVNPESALAIAAIPSETLPGCPAEWTQFNTN STAPALCFKRFEKSMNFEDARLFCVSKSGHLASIHNERQLLLLSALLHNKGPDALSDQ TWIGLNRIHQKYYVYEDETAMDFTRWLPGAPNINDCTVFTGNELPNYPHKGTQYKFGD FPCEEAQKSVLCEVTLGKDKIKSKPTCEEGWSYYSHDGTAMSGKCYKRIDEAKKFTES REVCKLQNSYVASVQNEGEARFVSALVQTEKNYTVDEQTWIGYVKYEKDFGWEDGNTG LHFDPWTEKMPREKKCTVFTGNEIHEDCRSQYRFVSVDCNKNQRSVLCSKPPMTDGKR FVFKDTENSTKKV" CDS complement(join(1073546..1073620,1073666..1073773, 1074029..1074233,1074281..1074415,1074505..1074759, 1074984..1075525,1075597..1075662)) /gene="CBG10029" /locus_tag="CBG_10029" /standard_name="CBG10029" /product="Protein CBG10029" /note="contains similarity to Interpro domain IPR019734 (Tetratricopeptide repeat)" /note="Predicted" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR013026" /db_xref="InterPro:IPR019734" /db_xref="UniProtKB/TrEMBL:A8XA77" /protein_id="CAP29545.2" /translation="MEESNQDEIIGVVTVHNGEDGDRHGVETNGVDVEPVPDRPPPKR VEILDCNSLNGLMYHYFAQGDYIECKSLIGEIQSKYKEKNEAAFHVRGLIARNEGELE EAMDCFEKAYQLSGKNKKFEMFCTVRQLLSYYRYFYETRRCNFLLGRNQIAVELLRKA SEVMKDNPKVWYWMARAIYHLPLEKIPGKTFNPTETARNLLMGSTVAKDAELITFLGR LCEELQDTEGAIAAYESAMKLQPDNTDVMIRLALVLLRMGKEKEGFEQLGNCLAYDPS NSQAILTLGSIIVAADACDYNGCLWNNIGIGLLARNKSAAAHSALKKASFISPLDYKI SLNLGVLHDIMKLHCSALHYIKLCTELKPNNAKAVGAMAVIMSHMNDVKNARAAYKKS IELQPSPSIVLNYAIFEYRTKNFAAASTAVKIYKQLEASGMKCSDNHKQTASLLNSVL KQHEETPSEEN" CDS complement(join(1075862..1076018,1076062..1076179, 1076227..1076311,1076357..1076662,1076707..1076917, 1076964..1077222,1077279..1077378)) /gene="Cbr-pri-1" /locus_tag="CBG_10030" /standard_name="CBG10030" /product="Protein CBR-PRI-1" /note="C. briggsae CBR-PRI-1 protein; contains similarity to Pfam domain PF01896 Eukaryotic and archaeal DNA primase small subunit contains similarity to Interpro domains IPR014052 (DNA primase, small subunit, eukaryotic/archaeal), IPR002755 (DNA primase, small subunit)" /note="Predicted" /db_xref="GOA:A8XA78" /db_xref="InterPro:IPR002755" /db_xref="InterPro:IPR014052" /db_xref="UniProtKB/TrEMBL:A8XA78" /protein_id="CAP29546.1" /translation="MSYNSIRLTQDLPVYYKNFFPVKPFIKWLRYGLGFGEYLNRREF AFILADDVHIRYRSYHDELSFFKALTSTNPEKLDIGAVYNHEPINNKRHTDYQAVERE LVFDIDLTDYDNIRNCCKEATVCPKCWKFMVLAVKILDFLLDDMFGFNARMWVFSGRR GVHCWVGDKKARMLTNNHRSAVATRLNLFKKNGQFEATEGKAKNTRVPPIVRDAYNIA MKDGTFGEMVLEQGWLENDDFLKDELLLTDKGKKELIENLEGYDTPEKRWHALRAMFD EDYRRKLGSENEFKDYHPQGRDRFALHTFVLQKCYPRLDVNVSTGTNHLLKSPFCIHP KTGNVAVPLNVDKIAEFDVSKCPRIDRVVEELASLQADREADENEDSKNRKFLAYKHG LLAPYVENFEKFANLAATS" CDS join(1077580..1077610,1077657..1078024,1078073..1078218, 1078264..1078387) /gene="CBG10031" /locus_tag="CBG_10031" /standard_name="CBG10031" /product="Protein CBG10031" /note="Predicted" /db_xref="InterPro:IPR032072" /db_xref="UniProtKB/TrEMBL:A8XA79" /protein_id="CAP29547.2" /translation="MSPLTQDASTSTQSVIFEFTNLDDFHGVLNLLETRKHYLYSEIR SFYNISDKNVSTEGLEGVTTPFKFHQCRFHFQEVHIEILVKNPPQNIDFGWERRMKHL FRYMLDLEKLMWNLSTLGGAYSAMGDFDTDYAKTAMKITTHQISLAKKYGDPVILARC YLYTALAEAQLGNLIQAVHIVRAVRHWSKQNPNTEIVQRCCEGVYQKLRAIHIFGTAD SNKL" CDS complement(join(1078509..1078736,1078784..1079015, 1079060..1079202,1079268..1079580,1079629..1079750)) /gene="Cbr-cpar-1" /locus_tag="CBG_10032" /standard_name="CBG10032" /product="Protein CBR-CPAR-1" /note="C. briggsae CBR-CPAR-1 protein; contains similarity to Pfam domains PF00808 (Histone-like transcription factor (CBF/NF-Y) and archaeal histone) , PF00125 (Core histone H2A/H2B/H3/H4) contains similarity to Interpro domains IPR000164 (Histone H3), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /note="Predicted" /db_xref="GOA:A8XA80" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="UniProtKB/Swiss-Prot:A8XA80" /protein_id="CAP29548.1" /translation="MYHHDSGPHIEEVFDPPSRRTMMQEIETHPDVIAFGKKLRKIKN QPESTFLSSADRMEEIIDAFRDQIAKWEEEEELNEPCEYRQLKIEIFTQKKIEYQRKN NLAVDEFYKKRNLKNHSNRKPLEESRRREEPRDRVHESNIDITHRGDSTSLNHYSRHH YSQRQSQSSRFERERESDEEEENSQPIQRYRSRSPKPSYSYNQSTMQQSQRDDTNVYH RSHQSTSQPPQVRMRSGKSRVTKTHNRKFRPGQKALAEIRKYQKSTDMLIQKAPFVRL VHEIIREQTYKSQDYRIRADALMALQEAAEAFMVEMFEGSVLICNHAKRVTLMPTDIQ LYRRLCLRNLS" CDS join(1086026..1086199,1086288..1086337,1087502..1087777, 1087829..1088046,1088097..1088504,1088560..1088746, 1089254..1089383) /gene="Cbr-hlh-11" /locus_tag="CBG_10034" /standard_name="CBG10034" /product="Protein CBR-HLH-11" /note="C. briggsae CBR-HLH-11 protein; contains similarity to Pfam domain PF00010 Helix-loop-helix DNA-binding domain contains similarity to Interpro domain IPR011598 (Helix-loop-helix DNA-binding)" /note="Predicted" /db_xref="GOA:A8XA81" /db_xref="InterPro:IPR011598" /db_xref="InterPro:IPR036638" /db_xref="UniProtKB/TrEMBL:A8XA81" /protein_id="CAP29549.2" /translation="MLSFFLKSFFENFFVVVIFALSPSSYYQSGESFSAEKRKRESNL TEEERISNQKNVISMVRSDSAEEDQIINDDGFDLTEEDEEMMSSGTGALPVTITDWSS MTNARIAPPSIMSASSAFDLTASGMQNSLRSVLPTSTIGHAPMLANRSLSQPAPLSPT SLDPDRRMRRQIANCNERRRMQSINAGFMALRALLPRKEGEKLSKAAILQQTADMVHH LMGQKGDDIPDGGEPKKLKLEENHQDADQLAQIARLTTILETERAARKSLEKQVIQLR ELLAMTTTSSQASSPVTPISTGSGFTLPSSYASSALPTPLRESPERKPSFHDSTSTPL SLLTLNGSPTSSESLVAPRILHPLPSLENTVIRPTPLPPISVEVSSPSLSTPSPLTAA APIIFSSTAPPQPSILFQTVTSAMSTGNSTPVGLPHHLQGHNSAFVSTQPSMSLHQSM QTIVEAIRHLEGSHFIPTSPPPTSQTSLVR" CDS join(1089538..1089546,1089691..1089954) /gene="CBG25906" /locus_tag="CBG_25906" /standard_name="CBG25906" /product="Protein CBG25906" /note="Predicted" /db_xref="GOA:B6IHL6" /db_xref="UniProtKB/TrEMBL:B6IHL6" /protein_id="CAR99417.1" /translation="MMNLPDFSALLTVLFLLSTDITFCSHNAILFSCPVHLPTLPRYF YKTRVDFSFSHFFPIFHPVVLLTVYVQLDTLSISDLKLSLLLIRNI" CDS complement(join(1090134..1090241,1090287..1090493, 1090541..1090956,1091006..1091274,1091326..1091562, 1091606..1091709)) /gene="Cbr-tbg-1" /locus_tag="CBG_10035" /standard_name="CBG10035" /product="Protein CBR-TBG-1" /note="C. briggsae CBR-TBG-1 protein; contains similarity to Pfam domains PF00091 (Tubulin/FtsZ family, GTPase domain) , PF03953 (Tubulin C-terminal domain) contains similarity to Interpro domains IPR002454 (Gamma tubulin), IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase domain), IPR004057 (Epsilon tubulin), IPR002967 (Delta tubulin), IPR018316 (Tubulin/FtsZ, 2-layer sandwich domain), IPR017975 (Tubulin, conserved site)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XA82" /db_xref="InterPro:IPR000217" /db_xref="InterPro:IPR002454" /db_xref="InterPro:IPR003008" /db_xref="InterPro:IPR008280" /db_xref="InterPro:IPR017975" /db_xref="InterPro:IPR018316" /db_xref="InterPro:IPR023123" /db_xref="InterPro:IPR036525" /db_xref="InterPro:IPR037103" /db_xref="UniProtKB/TrEMBL:A8XA82" /protein_id="CAP29550.1" /translation="MSGSGALMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDD MNDKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPTFSNLFNTDNIFMSDHGGGA GNNWASGYFQGQEVQEKVMDIIIREAENTDNLDGILFTHSVSGGTGSGTGSLLLERLR EAFPKKVIQTYSVFANSDPTQTTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLA AGKFKTDTPTFDHINSLVARIMSTSTAMYRFNSSVCPSIRYLDLAPFPPMHFIQSAIS PVVDPNENFTRKTSVADVTRFLLKPTSMMVSTASRARPNDCMLSAYMFLQGQIEAHTI MSAEQNVDFAIRRPPFYMLKPLRMMHAPLSPYVKPQYKVSGLLLNNSTSVAPLFESLL SKYDKLRSKKAFLDKFEKIDNFSLDMMDDAMHIVQDLLDEYKAVVQKDYLTRGL" CDS complement(join(1091899..1092085,1092140..1092243, 1092290..1092436)) /gene="CBG10036" /locus_tag="CBG_10036" /standard_name="CBG10036" /product="Protein CBG10036" /note="contains similarity to Interpro domain IPR008193 (DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site)" /note="Predicted" /db_xref="GOA:Q61IX2" /db_xref="InterPro:IPR008193" /db_xref="InterPro:IPR009025" /db_xref="InterPro:IPR033898" /db_xref="InterPro:IPR036603" /db_xref="UniProtKB/Swiss-Prot:Q61IX2" /protein_id="CAP29551.1" /translation="MGKKSEKKVVEETMEVDEQPAVEPEAVPEEEPEVEDEDLNVPKK KKMEILDPKSFEQDPSNLTLILYEEDHTIGNSIKHILSRMDEVEFCGYNVPHPLEDKI LFRVQTKDGINALEVLVKAFESVEQVFSTIRGKFEAAYEKSIA" CDS complement(join(1093091..1093165,1093211..1093334, 1093379..1093433,1093481..1093578,1093625..1093727, 1093778..1093817)) /gene="Cbr-ubc-7" /locus_tag="CBG_10037" /standard_name="CBG10037" /product="Protein CBR-UBC-7" /note="C. briggsae CBR-UBC-7 protein; contains similarity to Pfam domain PF00179 Ubiquitin-conjugating enzyme contains similarity to Interpro domains IPR023313 (Ubiquitin-conjugating enzyme, active site), IPR000608 (Ubiquitin-conjugating enzyme, E2)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XA84" /db_xref="InterPro:IPR000608" /db_xref="InterPro:IPR016135" /db_xref="InterPro:IPR023313" /db_xref="UniProtKB/TrEMBL:A8XA84" /protein_id="CAP29552.1" /translation="MEQSSLLLKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPP DTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGY ERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYADFKKKVAQCVRR TQEE" CDS complement(join(1095163..1095295,1095346..1095530, 1095581..1095680,1095738..1096093,1096142..1096308, 1096356..1096655,1096800..1096935,1096985..1097230, 1097365..1097489,1097685..1098060)) /gene="Cbr-gei-13" /locus_tag="CBG_10038" /standard_name="CBG10038" /product="Protein CBR-GEI-13" /note="C. briggsae CBR-GEI-13 protein ;" /note="Predicted" /db_xref="GOA:A8XA85" /db_xref="InterPro:IPR003656" /db_xref="InterPro:IPR036236" /db_xref="UniProtKB/TrEMBL:A8XA85" /protein_id="CAP29553.2" /translation="MQTGTIADCASTLSALMAPADFSASLGNSDNSDNSDNSDDHVDV SSFTTTSESSPPYSTSDHHSPTDQRTDSPSSDHGQASFSPENVATSFDSSDRDASPDN LSMSSANINDLQEKSLNVDDDLQKLLRFHQESFIENNQNTINMMSAFNQNFLKQTLAN FNNVAPQLPVNLTTGIQMPASPCTTTATAPSVENTPTKRKRQRRNPVWPYFDVVDGTA RCKQCLYSTKSVFSTNLKVHLRSHHRPDYEKVIMAEDALNLNALLLSGNTSKLFNVDA NRKRMPPMTSSILMTINKLANQQQNGEENPLNAVLRQTLANNGLQQHFQSIQGQFQAA QAALQKQQQEQQQKQLLQQQQAQQAAQQAAQQQPQFALNAANLAALNQLAARNQIQPT PPPVAQDHIINTLNFPAHIKQEILNAPHGTDANGVPQPKRRRLRRHPVWVYFKDLEDR MVGCTNCEFRTGSAFSTNLKMHLKAHHKEDYEKVLQLEEEMRVEEGCFGPNKFKTDLI DYIRGGGNVSTPSAPSSAGATYASSNPKASPLVQQIINQSIARSQSPTISSNGEIKIK KEVDDEMFSGLSSTDKLAALVGIAGQREEVKNEDVMANFEELRQRLLGNSSLNGLLGQ QSNQTIAVDLNGSIIASETKSPCSSNEDDRKQERDKALARLWADNETLLTNSHFLDFV HCLAPEYEIPDAEILASTLTEPIQD" assembly_gap 1100355..1101093 /estimated_length=739 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(1112686..1112922,1112970..1113139, 1113218..1113262,1113445..1113540,1113586..1113862)) /gene="CBG10041" /locus_tag="CBG_10041" /standard_name="CBG10041" /product="Protein CBG10041" /note="contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)" /note="Predicted" /db_xref="GOA:A8XA86" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR029021" /db_xref="UniProtKB/TrEMBL:A8XA86" /protein_id="CAP29554.2" /translation="MNKSMISKRKKKAAAVKSGAERSERKPSKPTAKKSAPQSERAPR SKPKSNGTTCREQQEPTNRNEKKTKSKGSTEFWSGEETAKKMVASGFFNNNTINGTFK DLPTTKPPLDSCPCFKNNLHKVQRCLGGHCHYAIGIFLESTVAMTAYTLEILPDGCSN SLLTTIYHLHNWKQKRALDRVEDLVATVEKVLKTNENTVFMSMNGTGRAGTMLALFTA MLQVQKGKEVNPKETMEKLRAERFGLVETAEQYGTVHKAMALWFKNKSTSEEIQKI" CDS join(1115442..1115612,1115922..1116086,1116151..1116452, 1116499..1116608,1116653..1116867,1117873..1118052) /gene="Cbr-rom-2" /locus_tag="CBG_10042" /standard_name="CBG10042" /product="Protein CBR-ROM-2" /note="C. briggsae CBR-ROM-2 protein; contains similarity to Pfam domain PF01694 Rhomboid family contains similarity to Interpro domains IPR022764 (Peptidase S54, rhomboid domain), IPR018247 (EF-Hand 1, calcium-binding site), IPR002610 (Peptidase S54, rhomboid), IPR017213 (Peptidase S54, rhomboid, metazoan)" /note="Predicted" /db_xref="GOA:A8XA87" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR017213" /db_xref="InterPro:IPR018247" /db_xref="InterPro:IPR022764" /db_xref="InterPro:IPR035952" /db_xref="UniProtKB/TrEMBL:A8XA87" /protein_id="CAP29555.2" /translation="MLFQSLSQFEDQNHHKIDDQQYIHIIRIGSFKMDDKWREAAPVN DIEASSWIRIFRAFDTDHDGLIQCEEMQKTIRDSTYSFGFDHYELQKMSLYLEMREGK PVDFADFCYLMSKCKGYRLREYLFKAALTVTPRNQRIHVFSELQRYKCVPPPLFLILV SIVQLALYLYYVIDSSEGVWLSGPIPTLSPLIVSPFHLSELWRMVTYCIINVGIFHVI FNIIIQLAIGVPLELVHTWRIYILYLMGVLFGSLLSLALDPTVFLCGGASGSFAIIAS HLTTIVTNFREMESATVRLPLLIIFGALDYALAVYQRFFALRIDKVSMYGHIGGLVAG ILFTFILFRGSKPSRFYTVSFWVCLVLSGFYIAICIALIAAPNMLH" CDS join(1119130..1119194,1119239..1119404,1120143..1120307, 1120358..1120427,1121167..1121260,1121305..1122014, 1122171..1122329,1122377..1122519,1122566..1122847, 1123059..1123184) /gene="CBG10043" /locus_tag="CBG_10043" /standard_name="CBG10043" /product="Protein CBG10043" /note="contains similarity to Pfam domains PF02770 (Acyl-CoA dehydrogenase, middle domain) , PF00441 (Acyl-CoA dehydrogenase, C-terminal domain) contains similarity to Interpro domains IPR006090 (Acyl-CoA oxidase/dehydrogenase, type 1), IPR006091 (Acyl-CoA oxidase/dehydrogenase, central domain), IPR012258 (Acyl-CoA oxidase)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XA88" /db_xref="InterPro:IPR002655" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR009100" /db_xref="InterPro:IPR012258" /db_xref="InterPro:IPR029320" /db_xref="InterPro:IPR034171" /db_xref="InterPro:IPR036250" /db_xref="InterPro:IPR037069" /db_xref="UniProtKB/TrEMBL:A8XA88" /protein_id="CAP29556.1" /translation="MPLNKLIQDGDNQDLTNERFKSTFDTDALAAVFHSGEDSLKRIR EVRDEITKRGHLFDSLPAAHRTRAEKMEDVSRKLKNLMENVNEFADFTNNLDMLTIIR DVMGVEGFPLALHNLMFVPTIQNQADDEQTEWWLMDAIQGKIIGTYAQTELGHGTNLS AIETTATYDKSTEEFIIHTPTTTATKWWPGGLGTSCTHVILVANLIIDNKNYGLHPFF VPIRDRNSYSQMSGVRVGDIGTKMGVNCVDNGFLAFDNYHIPRRNMLMKHSKVSKEGV YTAPSHPKVGYTTMLYMRSEMIMHQSYYLAMAMVIAIRYSAVRRQGEIKPGTQEVQIL DYQTQQYRLFPGLARCFAFVTAANTVRQMTESCIQELSHGKSDVLADLHALSCGLKAV VTHQSSTSIDQARQGCGGHGYSDASYLPTLYTCSVGACTYEGENMVMLLQLSKYLMKA AAKAEEGAVMAPLVAYLAKSEPVAIGDKFEKLLSHFEHIARHRVMHAYRQMIEEEKQG IERDYAFANHSVDWTKAARAHTKLFIARGFVKMVQEVSNPEVHAVLTTLAELYLSYEL IEMSSDLTANGYLSESQVQEIRHQIYDCMKKIRPNAVSIVDSFDFCDRELRSVLGRRD GHVYENLYKWAQMSPLNQKNLPHVEKYLKPMTSKL" CDS join(1125715..1125789,1125835..1126011,1126061..1126316, 1126362..1126504) /gene="CBG10044" /locus_tag="CBG_10044" /standard_name="CBG10044" /product="Protein CBG10044" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XA89" /protein_id="CAP29557.1" /translation="MDDVSNALAMSQSVMEKMKKLEISKNYDVQKFETLLRLPARDVN AFMEKEGKKTEDEKMTDTDKRVKNIREERKDRAARTLQKYFRKIRVDGEKEVIKSRIT KISAKKRVQLLEQIRQKMGEQQPIRRFGAYQVIRAVELHKGKQKFQNEWLAKMAVDLK FHDKNLSRPNSPTHFLANSIPALIRQKAEMKHAEKMQEIDSSIMEIYCGYQKDNLH" assembly_gap 1127028..1128196 /estimated_length=1169 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(1129152..1129257,1129658..1129863,1129960..1130105, 1130151..1130333,1130382..1131354,1131401..1131493, 1131576..1132567,1132616..1133073,1133120..1133295, 1133343..1133543,1133591..1133850,1133898..1134402, 1134451..1135311,1135361..1135555) /gene="Cbr-ced-7" /locus_tag="CBG_10045" /standard_name="CBG10045" /product="Protein CBR-CED-7" /note="C. briggsae CBR-CED-7 protein; contains similarity to Pfam domains PF12698 (ABC-2 family transporter protein) (2), PF00005 (ABC transporter) (2)contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR017871 (ABC transporter, conserved site), IPR003593 (ATPase, AAA+ type, core)" /note="Predicted" /db_xref="GOA:A8XA90" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="InterPro:IPR026082" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8XA90" /protein_id="CAP29558.2" /translation="MPGSPLVHWLRRYLRWGPKERKEKDSDDESSAIEDETVPFGEFN ENYDSQESARRNRRKMNRLRQFSLLLWKDWVLLRRNKVWTLFELILPCLLLGPLVYLV VKGAASSSSPSNTYDEFKLTGTVEDVFLEYSFIKPIYRRWCLRTDIVLGYTTKNPSDM TVVNNLMNQVSDRFQNGKLKMRVKSEETEDQLMTILRNDLPNQNDTSSFCAINSYIGG VIFDSIDLSQKKLKYRILITKAIEEVWHLTETSFNPYGPQSGRSGRIPTSPPYWTSGY LTLQHAIETSFILSAQPESSDLPLIFRGLPEPAYKTSSVSSFIEFFPFIWAFVTFINV IHITREIAAENFAVKPYLTAMGLSTFMFYAAHVVMAFIKFFIIFLFSIIPLAFVMEFV TPAALIVTVLMYGLGAVIFGAFVASFFSNTNSAIKAILVAWGAMIAISYKFRPTLDQI PTCFLYGLNINGAFALAVEAISDYMRRERELNLFNMFNDSSLHFSLGWALVMMIVDIL WMSVGALIVDHIRTSSDFSLRTLFTRGDVLDEYETQTDGQTAYNTRINEQVRNRVQRR DMEIQMNTMGTSSLNPPNADSDALLEGSTEVDGARDTARADISVHRLVKIWPTTGERA VDGLTLRAVRGQCSILLGHNGAGKSTTFSSIAGIIQPTYGHISICGHDVGREANETRR HIGMCPQYNPLYDKLTVSEHLQLVHGLKGARKADFKQEMKRLLVDVKLDFKENERAMN LSGGMKRKLCVCMAMIGDSEVVLLDEPTAGMDPGARQDVQKLVEREKANRTILLTTHY MDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLDHTGEKRKMAEVLTSV CSHFVEGAERGEMHGQQIEIILPEAQKNSFVPLFQALEAIQERNFRSYALESIPNQLK SQLATLVMKSFGLSLNTLEQVFITIGDKVDKAIASRQNSRISHQSRNTSEPSLKPPGY DTQSSTKSADSYQRLMDSQARGAEKTGFTKVTAQFVAILRKKWLYSIRNWTQLFGQVL IPIVLLGLVASLSTLKSGNTDQYRELSSYGIEPSKVVWRFDDTVPEEASHLESLLKKS GGFDVIKYSRNTPLSNITKSLIGEMPPASIGSTFAKDNSSLENLFNMRYYHVLPTFVS IINRARLTGSSSVDAQIDGGIFLYSKATSESTLLPSQLIDVLLTPMLILIFAMVTSTF VMFLIEERTCQFAHQQFLTGISPVTFYSASLFYDGVLYTLICIIFLAMFIVFNWMYAH LRIVILFWFLYFFSSVPFIYAVSFLFQSPSKANVMLIIWQVVISGAALLAVFVIFFLF DIEESLKAFLMVRIPESGVKHFEFCIQNIFLFLLPSYAFGNAIITINTYGLIFTSDEE LMSWDRCGKNAVFMAVFGAFSFALFIFLQFKCVRRFLSQVWTLRRSANNNVQPMMGDL PVCTSVEEERHRVHNANPQNLALAVKDLTKTFGRFTAVNELCLAVDQKECFGLLGVNG AGKTTTFNILTGQSFATSGEATIGGRDVTEYIAIGYCPQFDALMLDLTGRECLEILAQ MHGFEKYKDKAELILECVGMQAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPT AGIDPKARREVWELLLWCREHSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQ ELKSLYGNNYTMTLTLYEPAQRDVIVQLVAARLPNSVLKTTSTNKTLNLKWQIPKEKD DCWSEKFEMVQRLAKDLGVKDFILAQSSLEETFLRLAGLDDDQLDTHSTVNITHSTHV " CDS complement(join(1135922..1136125,1136182..1136361, 1148950..1149045,1149121..1149153,1149205..1149267)) /gene="CBG10046" /locus_tag="CBG_10046" /standard_name="CBG10046" /product="Protein CBG10046" /note="Predicted" /db_xref="GOA:A8XA91" /db_xref="UniProtKB/TrEMBL:A8XA91" /protein_id="CAP29559.1" /translation="MKVIHFKGAAFRHLDDGKVEMMPPYFYDRKAKNVVLVLMVVDII FTCFCILPANDLVACVLFATRHNLSKKTVFSKWQICRDHPELNLCKWHNGGMVTVPVP ATTTERTEDSAEAPPLSESIFVNEPDMMLSSKWSNAEILQETVQKELRTEPNRFEGRL HRESDSAEMKDVEDQKFDETIMSANEDVFSA" CDS join(1138432..1138476,1138522..1138617,1138664..1138934, 1138979..1139082,1139139..1139367,1139412..1139513, 1139560..1139675) /gene="CBG10047" /locus_tag="CBG_10047" /standard_name="CBG10047" /product="Protein CBG10047" /note="Predicted" /db_xref="GOA:A8XA92" /db_xref="UniProtKB/TrEMBL:A8XA92" /protein_id="CAP29560.1" /translation="MAGGTNAPSGEFKTKDKVTMFFGVIATLFFFVMSTYDSGMQKVF LCLAFFEFCAVALHPCRNGFTITVHFIYQTMVFLVPTFLFACCIYKDNEDRLNEIRLR YDLKPNLDFLKANGWECFRGIIDHCSIFWLAVLCIVWTVRILHTHFLLIDWNTKDRLN NPETRDLGPIKQSSLHILLNVIFASIFSTIAYYSEYSELFIRLAVIEWLMTFSYVIKN SGIMLLHFVFQAKVFFMVFSTYCIAMMYEIWKPEMTIFLDSHKCHFMIVFLEKESLLV MTVFAAAWFFRMVTTHIFLVEVATDYQVRGRQAQRQFNRLVEDI" CDS join(1139879..1140061,1140108..1140333,1140384..1140544) /gene="CBG10048" /locus_tag="CBG_10048" /standard_name="CBG10048" /product="Protein CBG10048" /note="Predicted" /db_xref="GOA:A8XA93" /db_xref="InterPro:IPR035321" /db_xref="UniProtKB/TrEMBL:A8XA93" /protein_id="CAP29561.1" /translation="MVKFYDPSQPEQYLSSPKLFGVLPIKLIVISMQILYMLLQIVWL TASGVTSKVSILLVIASVILTAFTVAVFVVENKSLMQAHIWVASLFLFFPLAVFVLMI AQFFFDIKFLATFFGEGIYTHPITSLTVAAVFLCAYIAYLFLCHKLVEAKDQQPDDFP ELDTTQGLFHYNRDAYDGSERVNLIYPEV" CDS join(1141244..1141414,1141468..1141575,1141628..1141759, 1143623..1143829,1143883..1144018,1144062..1144178, 1144225..1144361) /gene="CBG10049" /locus_tag="CBG_10049" /standard_name="CBG10049" /product="Protein CBG10049" /note="Predicted" /db_xref="GOA:A8XA94" /db_xref="UniProtKB/TrEMBL:A8XA94" /protein_id="CAP29562.1" /translation="MAILINVSRPQKLMTWIGAIVFSLFSILQFCELMSKKYDPNQPQ TEMIIELIRRFVMLFISIIVFVGFLTEQKVIMTIHILFMASPCHSDHHTNILFFIESL EGGPMLINNEGAKCINIEGVMCVNMETILAIFLLYIISTRFKLKPVMTIKTKVSHPQK IEKDTDMTAIKLGVLFAQAFFLFIQIWTLPHIQFEKKTQLIPRFTMPFASAIVFIGFL TKKNIIMAIYIGFLTSLLAVPITTLFATAFSFFKSLEEGAVFINTEGAMCINIEGAMC LKVDTIVSIFFMSFCNLVYIAFCCSLLTDITYGNPGTLPYTSKMHKSSRDSEKLIYPK I" CDS join(1144621..1144668,1144845..1144980,1145024..1145143, 1145191..1145298,1145858..1145919,1145959..1145994, 1147981..1148107,1148296..1148447) /gene="CBG10050" /locus_tag="CBG_10050" /standard_name="CBG10050" /product="Protein CBG10050" /note="Predicted" /db_xref="GOA:A8XA95" /db_xref="UniProtKB/TrEMBL:A8XA95" /protein_id="CAP29563.1" /translation="MTIKTKFSHPQKVEKKLFISAVVIIGFLTKQKIIMTVHIWFMAS LMAWPIFALHAVVFMLFQSLEEGDMIINTGGDTGTNMDGSMYLKLATVVFIFFLISLG NLVYIALCYILLDDIKYGHPGTLPYSSKMHGSYQDKSLEGKAVSDIITAFIVLNRKCL EYTYGCATSSLPISAIFAYFGYYRESCPIIYLHMVCSTSLLVILPWLIWNPNTHCFML PASLKMFTYAGMNEKITEALKDKEFVKKIGKPDDEYRPPSPLFF" assembly_gap 1146694..1147030 /estimated_length=337 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1149975..1150586 /estimated_length=612 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(1150635..1150814,1150863..1150998,1151047..1151115, 1151162..1151244) /gene="CBG10051" /locus_tag="CBG_10051" /standard_name="CBG10051" /product="Protein CBG10051" /note="Predicted" /db_xref="GOA:A8XA96" /db_xref="InterPro:IPR035321" /db_xref="UniProtKB/TrEMBL:A8XA96" /protein_id="CAP29564.1" /translation="MSNFYERRVLHSMESPMLCDFIPVKLVVLVVQIATLLITVGVIS RNVSLSSESAMFEIFVVVFLVASVVSFLADYELFMHIHYWVVCVLIIVPLYYWGQSIV NLYNHIFNNSESPAVFSFATSTFILCSYIFYIWSCRQLIISLGRKYVLPFFKS" CDS join(1151505..1151681,1151731..1151866,1151912..1151983, 1152031..1152203) /gene="CBG25907" /locus_tag="CBG_25907" /standard_name="CBG25907" /product="Protein CBG25907" /note="Partially confirmed by transcript evidence" /db_xref="GOA:B6IHL7" /db_xref="InterPro:IPR035321" /db_xref="UniProtKB/TrEMBL:B6IHL7" /protein_id="CAR99418.1" /translation="MAHFYEPRDSRLSKAPLCCCCIPIKFIVLLVQVLALVFQIWLLC AEKTSNVMLFVKVLLAVYTAFTFGVFLIEHKSLMNFHCFLGVICLLAPFAHVALEYFA SAKKLFLHYDYSPKTDVFVIVGIIMLVVLVYLTMCRALVNELNKQNQLPSYVAATQPS FNTEYMPELTEKTKLIHPIYPQLQY" CDS complement(join(1156227..1156474,1156524..1156578)) /gene="CBG10053" /locus_tag="CBG_10053" /standard_name="CBG10053" /product="Protein CBG10053" /note="Predicted" /db_xref="InterPro:IPR016181" /db_xref="InterPro:IPR031165" /db_xref="UniProtKB/TrEMBL:A8XA97" /protein_id="CAP29565.1" /translation="MAFRVEHCRKATEFFIKFNTGSKAYLQYAELPNRVLDFQHTVTP EDQQGKGVARVLVKEGLKYAADNKYLVQPTCWYVAKYLDGESATKEEKELDIRHKL" CDS complement(join(1157018..1157124,1157172..1157468, 1158101..1158386,1158458..1158606,1158652..1158719, 1158769..1158849,1158895..1159036,1159656..1159712, 1159758..1160163,1160207..1160537,1161200..1161313, 1161363..1161559,1161602..1161855,1162924..1162967, 1163015..1163180,1163376..1163497,1163842..1164022, 1164070..1164349,1164556..1164684,1164891..1164956)) /gene="Cbr-unc-16" /locus_tag="CBG_10054" /standard_name="CBG10054" /product="Protein CBR-UNC-16" /note="C. briggsae CBR-UNC-16 protein; contains similarity to Pfam domain PF09744 JNK_SAPK-associated protein-1 contains similarity to Interpro domain IPR019143 (JNK/Rab-associated protein-1, N-terminal)" /note="Predicted" /db_xref="GOA:A8XA98" /db_xref="InterPro:IPR011047" /db_xref="InterPro:IPR019143" /db_xref="InterPro:IPR032486" /db_xref="InterPro:IPR034743" /db_xref="InterPro:IPR034744" /db_xref="InterPro:IPR039911" /db_xref="UniProtKB/TrEMBL:A8XA98" /protein_id="CAP29566.2" /translation="MACNLSPVNEMADSITSSTPSEIVYGGTGSPDEHRTMSDKVQTM ASAIYRELETMIKVHGEENVKTLMPLVVNVLESLDLAYLERDEQTAELEMLKEDNEQL QTQYEREKALRKQTEQKYIEIEDTLIGQNKELDKKIESLESIMRMLELKAKNATDHAN RLEEREAEQKLEFDRLHERYNTLLRTHVDHMERTKYLMGSEKFELMQNMPLPNMQLRN KMGMAASVDASSIRGVSDLISAHMTQSTTMDVNLANHITNEDWQDEFSSDVEPSPRDL PPPASESLASPVFTKEPTPQHEAVSPKRSEEEADDTSSLEPKENNDSLGADLTGMGRE VENLIKENSELLDMKNALNIVKNDLINQVDELSSENMILRDENMSRQMVSEKMHEQIA KLEEEVKTMKQKLMEKENEQEEEDVPMAMRKRFTRSEMQRVLMDRNAYKEKLMELEES IKWTEMQRAKKMQQQQQNVNQKKSGGIWEFFSSLLGESVTPPASARGNRTTSSRSKMT RSVEYIDPDMISERRAAERREQYKLVREHVKKEDGRIEAYGWSFPNVDADVSSVPIPV CCRPLLDNEPSLKVWCATGVVLRGGRDEKGQWIVGDPIYFAPASMKKTKTSNTRTELE DEIKLQRARNLDARESELDEWQSSSLVWVVSSNQGKSLIAVLDANNPNNIIETFPACD SHLLCIQAVSGVMEGEPEMNEEQSKKFLCGGGKVKELPEGLDSTDLGSCEWVELRKME DSEDGVPTYCSNDMKPSPKRTRDFSISEVAAVDPASVPVPVKEPVPPANRPGGRAALP PHIRDAMSKYDGVSGQMSGALPTVWMGGQNQYIYIHSAVTAWKQCLRRIKMPDAVLSI VHYKGRIFAALANGTIAIFHRNKHGEWSDEGYHSLRVGNATSSVRSLCLVSTNIWATY KNCVVVIDAESLQIVKVFAAHPRKDSQVRNMQWVGAGVWLSIRLDSTLRLYHAHTYEH LQDVDIEPYVTKMLGTSKLDFSYMRTTALLVSNRRLWIGTGTGVIISVPFSGQIEKKV ESKDTKRPAGPGGLVRVYGTSSENNTDEKSSDDFIPYCNLSHAQLSFHGHKDSVKFFL GVPGASKNGEDESAEVTLRRMLIMSGGDGYIDFRIGEENEPELTGQSIRPRDMSHLII WEIDAELPILSK" CDS complement(join(1165524..1165622,1165672..1165800, 1165842..1166018)) /gene="CBG10055" /locus_tag="CBG_10055" /standard_name="CBG10055" /product="Protein CBG10055" /note="Predicted" /db_xref="GOA:A8XA99" /db_xref="UniProtKB/TrEMBL:A8XA99" /protein_id="CAP29567.1" /translation="MIGLTILFQGLVPMRHISKFEGFWMFSAGVTCMVFAVITFIGLL IMSRSKCIQTMGKIKLLIFHSTAIVTTLLSLIFFIVYAFVPIASAEHAAIQNAVLLLV VASGLVFLSTSGILLMALLSAPEIPSERDDDD" CDS complement(join(1166262..1166398,1166445..1166544)) /gene="CBG10056" /locus_tag="CBG_10056" /standard_name="CBG10056" /product="Protein CBG10056" /note="Predicted" /db_xref="GOA:A8XAA0" /db_xref="UniProtKB/TrEMBL:A8XAA0" /protein_id="CAP29568.1" /translation="MVTGVYAGLGALFSAVFVVLTILKSKSAVCKPSGKEDLDKLNAI EGLELIKEDSGDYSQGGGRGGDKPKPKKKGKKEV" CDS complement(join(1166683..1166835,1166878..1167003, 1167055..1167312,1167358..1167623,1167668..1167782)) /gene="CBG10057" /locus_tag="CBG_10057" /standard_name="CBG10057" /product="Protein CBG10057" /note="contains similarity to Pfam domain PF01008 Initiation factor 2 subunit family contains similarity to Interpro domain IPR000649 (Initiation factor 2B-related)" /note="Predicted" /db_xref="GOA:A8XAA1" /db_xref="InterPro:IPR000649" /db_xref="InterPro:IPR037171" /db_xref="InterPro:IPR042528" /db_xref="InterPro:IPR042529" /db_xref="UniProtKB/TrEMBL:A8XAA1" /protein_id="CAP29569.1" /translation="MVQESIISSFRAKLENDPSKSTSLATVETLMEVLDRSRATTVAE FQNELKQVVAALEKTDYSSTSIRSAADLFTRFTSLAPAALLDQEDFSQVLDLYRQRAR SFIKNVRGSRAKISKCARLFFTHHMNILTHSYSKVVLETILDAHKSGYHLNIWVTESQ PDASGKLMLGELKKNGVPATLVLDSCVGYIMERIQAVLVGAEGVMETGGIVNKIGTVN VCVIAKSRHVPVYVCAETIKFVREFPLNQADIPKEFKYRTSVIAKDQLESEHPDVDYT APEFLTLIITDVGAMKPEAVGEELIKMYI" assembly_gap 1167970..1168068 /estimated_length=99 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(1168221..1168404,1168449..1169271,1169322..1169508, 1170433..1170434,1171832..1172026,1172070..1172670, 1172722..1172822,1172866..1173251,1173300..1173426, 1173474..1173651) /gene="Cbr-mut-7" /locus_tag="CBG_10058" /standard_name="CBG10058" /product="Protein CBR-MUT-7" /note="C. briggsae CBR-MUT-7 protein; contains similarity to Pfam domains PF01612 (3'-5' exonuclease) , PF01927 (Protein of unknown function DUF82) contains similarity to Interpro domains IPR002782 (Protein of unknown function DUF82), IPR002562 (3'-5' exonuclease domain)" /note="Predicted" /db_xref="GOA:A8XAA2" /db_xref="InterPro:IPR002562" /db_xref="InterPro:IPR002782" /db_xref="InterPro:IPR012337" /db_xref="InterPro:IPR036397" /db_xref="InterPro:IPR037432" /db_xref="UniProtKB/TrEMBL:A8XAA2" /protein_id="CAP29570.2" /translation="MDEPRKKLTKAEKKAKYRTDYPEPIKTRREDLKAIMNGRPEDRE MKARSRMRQFFEEDYNSNVNIYGMAVDMMMAMPDRTKTGGENLAHWYLEDFGKWLTET GREEYLRGKYLTSSVQLEALKSCLAEQKSLVSQIFDISPEKLLEDVTQLLRDSIVKRE YSKAAKLAVQHNLSNTLDFKELALPLILSGKNREAYQLMASAVEMQKDYVQFLDEMIG LSQTGVEEILEPYKSSRVMTIGLENFCGKTVEKQIQQVLSKVSQEFNFDKDLPKYAPK HSVRASLKALQYSIQQRYNGIDDNGDDNYFQTMVDTMQQDPNVQEKILFYLWDSNTHE KQVDAICIAIHLKINYPSSQHIPGKMKDFFREPDSRLKKLNVFCRRDCECKFPLKGGL RPKIFISTVCAPEEGEQMYVFEDDKCPIYMIKTESEMQSICEEIESLSREPEKSVYVG FDSEWKPSNLITANSSKIAIIQLFFKDKVLLVDCVELEKEKVPDLLWERFAKGLFETP KLKLIGFDMRNDLEAIIELPALKGRLNLEQIKNAYDLKRLAENICDIDMDILELPKKT FKLADLTQYLLGQVLDKTEQCSNWQCRPLRKKQILYAALDAVVVVNTFKKILEKTQER NEDVDVPSVVKNSNVLAPKKERDQKVMRKLKTIPWTEIYETLRNHRDTSMPLQRPHEI QVIVDTMLLGFGKHLRRVGIDVYLPRDVSDFKAKLRVINRIGGEYQRHIITVPSKSYN ALRVDYESNLMAIPELNHKAPLDQLIDFFDRFNVDLRPEDEFLRCIECNSRLQIKFPG PVLHFLHQYAVIHVQNVYRADMSEFPLEEWWNRMLRINPDDYDGIKVEMSRPNLKSKW MVATVPTGCLHITRQTAIHNNLPDGVEVRIHKVPDDEFQRPNLCFYVCGDCGTVGYDG RAPTESNGYESMH" CDS join(1173933..1173950,1174001..1174128,1174178..1174429, 1174477..1174587,1174637..1174805,1174853..1174929, 1174977..1175121,1175168..1175308,1175356..1175472) /gene="Cbr-ckb-4" /locus_tag="CBG_10059" /standard_name="CBG10059" /product="Protein CBR-CKB-4" /note="C. briggsae CBR-CKB-4 protein; contains similarity to Pfam domains PF01636 (Phosphotransferase enzyme family) , PF01633 (Choline/ethanolamine kinase) contains similarity to Interpro domains IPR002573 (Choline/ethanolamine kinase), IPR002575 (Aminoglycoside phosphotransferase)" /note="Predicted" /db_xref="InterPro:IPR011009" /db_xref="UniProtKB/TrEMBL:A8XAA3" /protein_id="CAP29571.2" /translation="MLSDIRTLFTQNSLDSDVILEKALELGSDYLRGGWIHLERNEVE VTQITGGQSNLIYLATATNETKFSSETPKCFLIRIHCQPAQQVFNDTVIFSVMSERGL GPKLYGFFQGGRLEEFLPSKTLDTDSIKLPEISRQIGALFPKYHDIDVPISKSAGALK TIRQNLESYKQLGGSVHTMRPNSVKYEKEETRKTISVEELEKEIETFEKWSTIFDDTI VFSHNDLAPLNVLELDATKELVFIDFEYACYNWRGYDLTMFLCENAFDYRVPPPGVWI DQEFVENHPNLQIFCEAYVDTLYKMKEQNPDRKFPLSEDRSAEVSRLMMEIKFFIPLA NLFWAVWSLRGFLAKHDNGHDLEVAASDRLTMYFHFKPQSEKIYEMLKNEQ" CDS join(1175711..1175958,1176100..1177119,1177169..1177354, 1177404..1177926,1177959..1178432) /gene="CBG10060" /locus_tag="CBG_10060" /standard_name="CBG10060" /product="Protein CBG10060" /note="contains similarity to Pfam domain PF01612 3'-5' exonuclease contains similarity to Interpro domain IPR002562 (3'-5' exonuclease domain)" /note="Predicted" /db_xref="GOA:A8XAA4" /db_xref="InterPro:IPR002562" /db_xref="InterPro:IPR012337" /db_xref="InterPro:IPR036397" /db_xref="InterPro:IPR037432" /db_xref="UniProtKB/TrEMBL:A8XAA4" /protein_id="CAP29572.2" /translation="MLCSFLVLFHLPFLPFFGFFSGKENLSSNFFPFICLVFQIKVIF RCLLTSRQKHQSQTRAVRKVNRRADGNINYITIGRKFLKRTEPCNRLRHVPPDAFKSP RKKKPGGKIMVQWFLNDFEKWEKENREKLKNQLTEETVSNATKYVVRDISLLKPFSTI FGFSEDLVLERRDEVIQEYFETRQFKEAADLIMRYDLVDKFSFEELVLPLILCDKCQV VDELLKLSPRFQKEYITFFDQLVGETDENVDAFFEPYKQQGLLTINTNRYHGKSLTTF IQKFFNGIAKRNNFDLEERRDAPKFEGYMKGKALKYFSKQRFELGAMSDEIYFEHAKN TLQNSSMDTVCYYFMLLWNTRIEERRLVFRKLAMLRNSVFDFSIEVLFWIKYINIPVD YPGLPYGAQRFFKNPDPKLLAEVEKLIGLRTSQPEEEVTEQLFVFENEQKYPIKIVKT ESELEDLCVEMDEVENGTFVGYDSEFRPGHLTDTNTIKVATIQLCFHDTTYLIDCVEL ENEKLPDKMWIRLYQSIFESKKLTVVGFDLKHDIEALFSIHPIRQQFKIEDIENFVCV RRFSEILMEIDINILNLSKSCRLVNLSEELLDITIDKSEQNGNWMSRPLRKSQIVYAT MDSVVVLKVFEKVLELAQKYEQPLEIDKLMEESRVRREMYYSISMGRGLSGKSKKTGR NISSPAHFQVIQDHRDPTKPLQKPFDLKLVIDTMLLGLGKNLRLLGVDVYIPIDSNGF TKYLREMRLSFPKNQRLIITVPSKSYETHKEENPNAHFFVLNNVYNTRNPLEHLGNFL NFFNLDIRKEDGFAKLES" CDS join(1178931..1178948,1178996..1179123,1179189..1179434, 1179485..1179595,1179642..1179810,1179855..1180334) /gene="CBG10061" /locus_tag="CBG_10061" /standard_name="CBG10061" /product="Protein CBG10061" /note="contains similarity to Pfam domains PF02958 (Ecdysteroid kinase) , PF01636 (Phosphotransferase enzyme family) , PF01633 (Choline/ethanolamine kinase) contains similarity to Interpro domains IPR002573 (Choline/ethanolamine kinase), IPR004119 (Protein of unknown function DUF227), IPR002575 (Aminoglycoside phosphotransferase)" /note="Predicted" /db_xref="InterPro:IPR011009" /db_xref="UniProtKB/TrEMBL:A8XAA5" /protein_id="CAP29573.1" /translation="MNQELINLFSTLSQDPTLVRKKVLEYGSDFLGGEWKTLTENDVD VVQMTGGQSNLLYLVKGKFASESTTPSCFLVRLHCQQENQVFTDTVVFSIMSERGLGP KLYGFFPGGRLEQFLPSVTLDNDTVSDPQVAVKIGANLPKLHAIEVPIPKRPRAIVMI QEFLEECRATGKSTFKFVPGSVDFKDTAIPNEVTIDELEEEVAKFEKMCSIFNDTVVF AHNDLWSANILQLNDTKEIVFIDFEYSSYNWRSYDLSMHLSECAFDYRVPFPPGVHVN QVFFENHPNIKIFCEAYIDTLYEMKKENPDQKYPLTDNREKEVHRLIQECKFFLPLVN LCWATWSIKNLWSGKEDDVDLTVAASNRLCVFYHFKSQSEAIFNELKNQ" CDS complement(join(1183957..1184145,1184203..1184517, 1184560..1184601)) /gene="CBG10062" /locus_tag="CBG_10062" /standard_name="CBG10062" /product="Protein CBG10062" /note="contains similarity to Pfam domain PF04051 Transport protein particle (TRAPP) component contains similarity to Interpro domains IPR007194 (Transport protein particle (TRAPP) component), IPR016721 (TRAPP I complex, Bet3)" /note="Predicted" /db_xref="GOA:Q61IU9" /db_xref="InterPro:IPR007194" /db_xref="InterPro:IPR016721" /db_xref="InterPro:IPR024096" /db_xref="UniProtKB/Swiss-Prot:Q61IU9" /protein_id="CAP29574.1" /translation="MSKAIKQNLADSKKMSAELFCLTYGAMVTEMLKDYEDPKDVTVQ LDKMGFNMGTRLADDFLAKNANVPRCVDTRQIADVLCRNAIPCYLGVSATASSWSSGD REFIITLESNPLTELVQVPPNLVSAGLSYSQMIAGAIRGALEAVHFKVYASAADSGAN TEIRIRFDQVLKDSLPAGEDD" CDS complement(join(1184824..1184916,1185093..1185853, 1185900..1186074,1186123..1186299,1187070..1187645, 1187696..1187982,1188240..1188324)) /gene="CBG10063" /locus_tag="CBG_10063" /standard_name="CBG10063" /product="Protein CBG10063" /note="contains similarity to Pfam domains PF01846 (FF domain) (4), PF00397 (WW domain) (2)contains similarity to Interpro domains IPR002713 (FF domain), IPR001202 (WW/Rsp5/WWP)" /note="Predicted" /db_xref="GOA:A8XAA7" /db_xref="InterPro:IPR001202" /db_xref="InterPro:IPR002713" /db_xref="InterPro:IPR036020" /db_xref="InterPro:IPR036517" /db_xref="InterPro:IPR039726" /db_xref="UniProtKB/TrEMBL:A8XAA7" /protein_id="CAP29575.2" /translation="MIPNGFPFINPNLMAAANIQQQILLQQRVAMSGAGGIPQIPMIP MPAHSAVAAHAAAAAAAVAAPTRPSPMLVPPGMGMEDSTASPAESEWSEHPHTDGRSY YYNKITKQSSWVKPDALKTPQERAASAKQAQQSVWKEFEADGKPYYYNTITKKTQWVK PEGEIITSKYSLTIFFHKFYVSEHEQQQKTTTTTTTSVTIDTNALAAAVQQKKAESDL DKAMKATLAAMPNVPLPSEKKEDDTQVNDEVELKKRQSERFRDLLRDKYNDGKITTSC NWDQAVKWIQNDPRFRILNKVSEKKQLFNAWKVQRGKEERDEKRLAIKKSKEDLEKFL QEHPKMKESLKYQKACEMFAKDPLWMAVNDEDRKEIFKDCIGFVVRRDKERKEQCRTR NLAAFSHILQSMDQIIYNTTWAQAQRMLIENPQFAGDTNLQLMDKEDALSVFEEHIKQ AEKEHDEEKEQEEKRLRRQHRKTREEYLLLLAGLHKRGEITSMSLWSSLFPIISTDTR FEHMLLQPGSSPLDLFKFFVEDLKEQYIEDRRLIKDIMTEKDLHIIATTDFKEFSEWI MSHPKGEKVDQGNMKLCYNSMVEKAENKAKDEEKELVRRKRRLESEFRNLLKAHNVDQ SSEWAVIKPKLEQEKAYLALENDEEREDAFNHYKNGTAGPYTLDVLEKKKKKKDKKKK SKRSDSRRSRKRSHSHTDSPRHSSDKRKRQESETD" CDS join(1186493..1186596,1186643..1186756,1186805..1186988) /gene="Cbr-mrps-23" /locus_tag="CBG_10064" /standard_name="CBG10064" /product="Protein CBR-MRPS-23" /note="C. briggsae CBR-MRPS-23 protein; contains similarity to Interpro domain IPR019520 (Ribosomal protein S23, mitochondrial)" /note="Predicted" /db_xref="GOA:A8XAA8" /db_xref="InterPro:IPR019520" /db_xref="InterPro:IPR023611" /db_xref="UniProtKB/TrEMBL:A8XAA8" /protein_id="CAP29576.1" /translation="MSSFITRAERSGNIFSRVTGLIRAGQLSWADRPLWYDVYISSPP LSPPDWNVKLPKFDQPIRPIFYEEDVLRAKFYKTYRSTAGIQVDSSRTSVSQQFINEY KLVKSENASATPEELFELTTKRLNENGIMLK" CDS complement(join(1188604..1188765,1188812..1188955, 1189002..1189103,1189508..1189724,1189792..1189817, 1190066..1190164,1190211..1190498)) /gene="CBG25908" /locus_tag="CBG_25908" /standard_name="CBG25908" /product="Protein CBG25908" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHL8" /protein_id="CAR99419.1" /translation="MSRNTGHSRNSEDQPSFQKRKITELVKLIPECDGYRWIENVNET FELLDEKMGMMTRVMTSLMCNEEPNTVFSRTDVLKRVLEDCRGITSLMQIQKMKLAAI RHEIPQTMDSNEIRRENTIMRRLFSGKRRKVLDMKISNVYRSVYREFLVYPSPIFKLS EFISHMNELPKPNRYTEEQVHLLVPDLMRRTFINGFSCNDGTDYIVVKELCMQNLGKQ LSNFVVTEDEYMTASVPKSLSDLKEMIAKLEVPILEKLDSELWSIVSNMILATAVRQA GAYIFPNEFPSNLQNSVLKVVTTLINSGFIEECQEDGQPQIFAKCIRKDTAERLGATV EIQWCLNNSYK" CDS complement(join(1192192..1192230,1192282..1192793, 1192840..1193236)) /gene="CBG25909" /locus_tag="CBG_25909" /standard_name="CBG25909" /product="Protein CBG25909" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHL9" /protein_id="CAR99420.1" /translation="MNNSKIRPNIFVKSTGISLNMQNGSPIVRPTVQSSNGKIHFQRL MNKCQSSGQEKKLFIVRGNTRLPAFLAAGPSIRRSLPANIDIGRPLPAKIEVEEATSP PQQLMEKEIKEEPIDEEVETCGAIANITESKPINLEDFMCPPVISQQSSSRMREDDLK QEPLVLHLKTDASKVSPSQLPLPHNFKKETRPYRKRNRKPTRNDDFIYENPESAEENI EDTPEPSSKSSKSAQGDGCRCEYIVPELDSKMDRIMDKMHFIETLARSMLAKEQTNAM EKSFSNSALVKAQNEIQLLRRQLIIQRNTGAVPRLDNNF" CDS join(1194059..1194188,1194236..1194303,1194351..1196097, 1196150..1197225,1197270..1197350,1197362..1197868, 1197917..1198096) /gene="Cbr-clu-1" /locus_tag="CBG_10067" /standard_name="CBG10067" /product="Protein CBR-CLU-1" /note="C. briggsae CBR-CLU-1 protein; contains similarity to Pfam domains PF05303 (Protein of unknown function (DUF727)) , PF12807 (Translation initiation factor eIF3 subunit 135) contains similarity to Interpro domain IPR007967 (Protein of unknown function DUF727)" /note="Predicted" /db_xref="GOA:A8XAA9" /db_xref="InterPro:IPR007967" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR023231" /db_xref="InterPro:IPR025697" /db_xref="InterPro:IPR027523" /db_xref="InterPro:IPR028275" /db_xref="InterPro:IPR033646" /db_xref="UniProtKB/Swiss-Prot:A8XAA9" /protein_id="CAP29577.2" /translation="MTSGSELKAEVDAPVVNGKDELVHEEDNNDSGHSSINTPDASED KQTDKLVKVTIQPSCGEAFDLHLSDNELVQELYQTLLDREATCHRTCFSLYLNGTAVD NYSEVRSVPGFIDGCTLNVVDEPYTVRDARLHLRQVRELLRFGLVQDQHEPPCGNEAQ SYLASIDLNPSEKKESKQSDILPPDYVLPGCKERSLAHLVVPQQKELIAVKDIAFSPF NPPPGPRKLRGDVLYIDVTTVENRVYHLTCCTRGFYVNNSQEQKFDPTISNANKTIYQ SVIELLQNVSPGFKKVYPQILKRRVEKSLVERLPTSYPVSTWVASPLKPDNYSSDSLR AIELIEPFRVGFEDHMPGLLRDWNEELQTTFEMPRKSLAERAVRDRSYYKIHADYVNA AAKGVQSILDGNILAINPGEDKKTHMYIWNNIFFSLGFDVRDHYKELGGDAAAFAATS TDLQGVRAFATLEDPKLNTLGMAIFDYRGYRVTAQSIIPGILEREQEQSVVYGSIDFG KTVVSDEKYHALLEDAAQQLKMLPHNVISVKDGVEQELKLFTSYEAKGIVGNDGRKYV LDLLRSMPPDVHYLEDAEVSETAKDLGYPRKFPHKLSALRRELVDQFCESRLVMFIQS TARKIRALITEAKEKNDEELIKQAAEAESELSLVFVAVSEDREIETKNKIVQDAIKEA CAEIHSIYEDRFVIKFNPDCFSPNVKHAPSENLERQRRVVIDAAEYLLTNQIPEIVQS FKDCTVQPIDGNNLADILHSKGINIRYLGEIGKRVQDTNSFARPLVLSDIVARSAKHV IRKINVQTPVDQLVVSTSHILNCLFSTVSEPSPVASHAHKKSSKKNGKKKNSGVWATL TTASLWKSICEESAYYYGYHIDTETLDKFLEQHEIQKTALFRRVVKIMGVQIVARDYQ LDSSAKKVAAFTEDDIINFYPIIKHHQPFTVDAKKMIIRGQHAMSLGASREAYECISE AINIMTAVYGVMHPDMPQCLRALARLGHVLGETPDALNHQHKATVMSERLIGLDSGNT IIEYNSLIHYLLICFQINLAHFAFGALLIPGSLRPLYRARYLMNLVFGEKHPIMAQID ANIGTILFTIQEYDTALKYLQSADAISKAIGEPRKLKTGLISNLIARTHAARGDFRAA LVAEKETSSIYTELYGKNHQRVKDSGEYLRTLTQQAVTFQKKMLNPDNNTNINELFQI QPPPISALFDILNIINGIMIIGIPGLSNLAALEKEQIGTAEESKATDVAAQLDNETLD " CDS join(1198885..1198959,1199008..1199193,1199665..1200135, 1200179..1200473,1200951..1201015) /gene="CBG10068" /locus_tag="CBG_10068" /standard_name="CBG10068" /product="Protein CBG10068" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XAB0" /protein_id="CAP29578.1" /translation="MASDMRHTSSNTRRPSMGSNSKLLAGKSFLLDIGNRQWRTKVAE RILNYGANIMDSFGEVDPHAVVSDNPMALKFEKKDGSQHFNEKIRTPQSFLKQMDAFA NKKGNTTSATTSLSTIRPRTDLKATKDTLTRTETPVVPQRSSKSRQSSVPRTAKVFVR VEAPTKRPEIRCIPRTAYDTLYGGSDTGHSVFRIAETALKERRVREYDLFVKGRYEPH KKPFKMDEKDKFCQFCEKEYSGERKDHERTDEHRAKARTRGLLPALERGILSARLKLK NSQNQVMMVAKRKLDDNAFQEQSKRARVEFEYGENMVKADWQSLKENNLTTVIPEKIL KVSPGKGSVLSPRRRQQRIQPRTSQGDLI" CDS complement(join(1201351..1201534,1201583..1202105, 1202908..1203001)) /gene="CBG10069" /locus_tag="CBG_10069" /standard_name="CBG10069" /product="Protein CBG10069" /note="contains similarity to Pfam domain PF03188 Eukaryotic cytochrome b561 contains similarity to Interpro domains IPR004877 (Cytochrome b561, eukaryote), IPR006593 (Cytochrome b561/ferric reductase transmembrane)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XAB1" /db_xref="InterPro:IPR006593" /db_xref="InterPro:IPR028836" /db_xref="UniProtKB/TrEMBL:A8XAB1" /protein_id="CAP29579.1" /translation="MSLLFDPGFVILREDQSVKLFNIILVMSQVFGGMAVLLVTIWMS KFESGFAWSEDPDKEFNYHPTFMVMGMVFLYGESILVYRVFRNERKKFSKTLHVILHS IVLVFMLTALKAVFDYHNLHKDASGNPAPIVNMVSLHSWIGLTVAILFCTQYAVGFIT YFFPGMPIPIRQLVMPFHQMFGVLIFIFVSITVAMGISERAAWKHTCWTKEGQMCAQQ AVSSFVGVFTFLYSVCVLLLVLNPRWKRQPLPEEEGLHHLTSSHSMTD" assembly_gap 1202217..1202439 /estimated_length=223 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(1204761..1204868,1204911..1205266, 1205318..1205465,1205516..1205633,1205692..1205741)) /gene="Cbr-vha-14" /locus_tag="CBG_10070" /standard_name="CBG10070" /product="Protein CBR-VHA-14" /note="C. briggsae CBR-VHA-14 protein; contains similarity to Pfam domain PF01813 ATP synthase subunit D contains similarity to Interpro domain IPR002699 (ATPase, V1/A1 complex, subunit D)" /note="Predicted" /db_xref="GOA:Q61IU3" /db_xref="InterPro:IPR002699" /db_xref="UniProtKB/Swiss-Prot:Q61IU3" /protein_id="CAP29580.3" /translation="MSGGGGKDRIAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALN LRFRDILKKIVENKVLMGEVMKEAAFSLAEAKFTAGDFSHTVIQNVSQAQYRVRMKKE NVVGVLLPVFDAYQDGPDAYDLTGLGKGGANIARLKKNYNKAIELLVELATLQTCFIT LDEAIKVTNRRVNAIEHVIIPRIENTLTYIVTELDEMEREEFFRMKKIQANKKKLKEQ EAAQRALEGPPKEEAGGTHSENQPPRNLLAVEEDNLPVLFN" CDS 1206022..1206090 /gene="CBG25910" /locus_tag="CBG_25910" /standard_name="CBG25910" /product="Protein CBG25910" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHM0" /protein_id="CAR99421.1" /translation="MGQDNEYEIKMAQKPTSRTATT" CDS complement(join(1206275..1206607,1206654..1206838, 1206891..1208107,1208156..1208508,1208553..1208597)) /gene="Cbr-let-99" /locus_tag="CBG_10071" /standard_name="CBG10071" /product="Protein CBR-LET-99" /note="C. briggsae CBR-LET-99 protein; contains similarity to Pfam domain PF00610 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) contains similarity to Interpro domain IPR000591 (DEP domain)" /note="Predicted" /db_xref="GOA:A8XAB3" /db_xref="InterPro:IPR000591" /db_xref="InterPro:IPR036388" /db_xref="UniProtKB/TrEMBL:A8XAB3" /protein_id="CAP29581.1" /translation="MSDDYSMDQFKATQMFDEIVWHFRANLPLKTNRSMLTSVENSFT GREALDFLLVEVPHILPGKVTTVEKMEKLFMMMMDWKIVAEAFPKKNQKRREFSDARV YVFAKSLDELRKPKVRSRRSASFSGARNSVKLVQTTSPSATVVRRPKTRLSRRLSRSN GNVDRAGVDNDPRGVENHGFDDRREDENQYKQTKRTRAPKVLNRSLESICPDHDSDKE NHTEKKEKVYDWLPFFKSRRYHKSHQPTRRSVSLDRNHCMVKAQEDEEEEKEEAVRSK MKIATPPIRESVNEQVFLHPRGPLSTAPARYQNHRTSLVCPNPASLSRGRMYESIMRR SSIVPPTDPPPPVLKDCIVWKTELLEKLVNLYGRPLPGEWASKVDGYDIRWNTHEIDS NDGVVKSRCSGLQPDYPTTIVNFMDYLGRYPFSSAKKLDLAPELNVNRMFGTLVNRLE DLNAPLQLDDCLLLVSFLSKMDGFASMLETGASHRWSKVMMSSASSIEEAGLMVDGFS RDIPACGIRASKQRRRALSPFDNRVNLVIQEEKLYKIREQWLIEAIQLVLLSLPTSRR RKLHKFVCFIKSIETNQLFDLADPSNGSSNNREAAIIGLWTGVCGGCRKQQGMLITAV LLANYRTLFAVPEEFVECVQRLEYAQNDQNEDPQYARINKTRRVRKQPIMEASLSSPA AFKKYSKDSKDITVEKSKKGLFTRLLRK" CDS join(1212646..1212706,1212754..1212854,1212902..1213087, 1213101..1213220,1214166..1214270) /gene="Cbr-sod-4" /locus_tag="CBG_10072" /standard_name="CBG10072" /product="Protein CBR-SOD-4" /note="C. briggsae CBR-SOD-4 protein; contains similarity to Pfam domain PF00080 Copper/zinc superoxide dismutase (SODC) contains similarity to Interpro domains IPR001424 (Superoxide dismutase, copper/zinc binding domain), IPR024134 (Superoxide dismutase (Cu/Zn) / chaperones), IPR018152 (Superoxide dismutase, copper/zinc, binding site)" /note="Predicted" /db_xref="GOA:A8XAB4" /db_xref="InterPro:IPR001424" /db_xref="InterPro:IPR018152" /db_xref="InterPro:IPR024134" /db_xref="InterPro:IPR036423" /db_xref="UniProtKB/TrEMBL:A8XAB4" /protein_id="CAP29582.2" /translation="MKNRVILVLALLACTEAASEVIRARAYIFKAVEGQIPTELIGTI DFDQSGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGSHYNPHKLSHGAPDDSN RHIGDLGNIESPVSKYLILMIQASGDTAISVSDSLASLSGQYSIIGRSVVIHEKTDDL GRGNSDQSKTTGNAGARLACGTIGTFPFPT" CDS complement(join(1214685..1214725,1215741..1215897, 1215948..1216064,1216118..1216281,1216331..1216439, 1216489..1216608)) /gene="CBG10073" /locus_tag="CBG_10073" /standard_name="CBG10073" /product="Protein CBG10073" /note="Predicted" /db_xref="GOA:A8XAB5" /db_xref="InterPro:IPR018619" /db_xref="UniProtKB/TrEMBL:A8XAB5" /protein_id="CAP29583.2" /translation="MNADQLSDFFYEVALAGAAIPKKVADQREENHLKKKFLNKFAPS SLWAASYIASNYTDVDLIQTTIAQILSLYYKSGVLRLYALQFVPGFVSLYLLALSKKQ HKSVSLFETFLVAIYNEEIIENAETNEKKVEDIRIPSIRHHSVYHDPVKIQVQADVPI IRNVGITPVLTTLRFGPFPSVSKMNGENKFMVMNRILFSVNESLFEVASEVAARYVCL GTLSEVVLQLFLKSEVF" assembly_gap 1217459..1217999 /estimated_length=541 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(1218850..1218969,1219019..1219127,1219177..1219340, 1219394..1219510,1219561..1219717,1219766..1220352, 1220403..1220564,1221040..1221156) /gene="CBG10074" /locus_tag="CBG_10074" /standard_name="CBG10074" /product="Protein CBG10074" /note="contains similarity to Pfam domain PF09790 Hyccin contains similarity to Interpro domain IPR018619 (Hyccin)" /note="Predicted" /db_xref="GOA:A8XAB6" /db_xref="InterPro:IPR018619" /db_xref="UniProtKB/TrEMBL:A8XAB6" /protein_id="CAP29584.2" /translation="MNADQLSDFFYEVALAGAAIPKKVADQREENHLKKKFLNKFAPS SLWAASYIASNYTDVDLIQTTIAQILSLYYKSGVLRLYALQFVPGFVSLYLLALSKKQ HKSVSLFETFLVAIYNEEIIENAETNEKKVEDIRIPSIRHHSVYHDPVKIQVQADVPI IRNVGITPVLTTLRFGPFPSVSKMNGENKFMVMNRILFSVNESLFEVASEVAARYVCL GTLSVCCSGFNFPETAFQSRVLETESHEVIEDFSRKPRQQVTGEFLDHLLRGCYLALF NGAADLALRAIDSIHLRAQYEMFPDTLLVINSLRNSLLDNMWSKKKRGELMWTRPQHK ELQKHRGMVTNASLKMKRMPEDIPVQENQKETSSSRINNMIDEGMDHLHDLKKKVVNI KGGLQHKMHRRKKSVEPEENELQTIKEEKPAESSFSADSENSSPSTVVHKLLVLNGDD VERRLRDVAVIEHDYEKKVETKAVEDPTSPATPSKEKGAFTMAGLRHMDSGGSTYRSI DN" assembly_gap 1220710..1220719 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(1222034..1222146,1222176..1222310, 1222360..1223602,1223652..1224590,1224641..1225588, 1225880..1226221,1226403..1226474)) /gene="CBG10075" /locus_tag="CBG_10075" /standard_name="CBG10075" /product="Protein CBG10075" /note="contains similarity to Pfam domain PF00515 Tetratricopeptide repeat contains similarity to Interpro domains IPR001440 (Tetratricopeptide TPR-1), IPR019734 (Tetratricopeptide repeat)" /note="Predicted" /db_xref="GOA:A8XAB7" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR013026" /db_xref="InterPro:IPR019734" /db_xref="InterPro:IPR031101" /db_xref="UniProtKB/TrEMBL:A8XAB7" /protein_id="CAP29585.2" /translation="MEEDNDEVPEIRTIAIPLKDSQEDGTHLKRLRRFSIEVWNLTQN WATASEKSVQYVESIINSRLKLLYSKDDKADESAKLTKDQTDRIFNDIVVANSKLNQT MSDFERIISKFEVARGRMSAWKLLTEKSSNAEEKYIEVIEINCSELPDGAEVLSILEA EEAKLSYWIEVALEYFRQDRVQPFMEILEAAGTRAGLEYDGVKQDQMRALDILAAYWM TQGYRERAKDKKQDFFSKATVLFNTADKIAMYEWSHLTVRAWFYLFERDKSTNKYELA DQQFNYVVKTYPQNVLPLIGKAVIAFNKKDYKTAIFYFRKAIRQRRYSIADLRVGIGY CFAKMGLVDKSKLAFERALELEPDNVSAMCGLGIILLNTLEQDNLKIAVNLFGRAYHA QPDQPVALVHLANHFFFKGEVERAWQLSWHAASNDCDSIKAEAFYQMGRCRHTQGQYD GAYKYYYQARQANNQEHTLAHYGLGQMYIHRNEIEEAIKCFEVVHQRLPHNTDTMKIL GSLYAHVQLADPARTNEARQKGRDVLAKYLNIEAEDCEACIDLAQLLESTDSKKSLEL YERAIDLLEAFEQIPPQPEMLNNVGALHMSMKQFDKAEHYFKKAKESLEEQLSSEAAQ FSDRRAAPERSHLLTIRYNLARCLEHLCRTSEAEQMYKDIISECPGYTDGYLRLGCIA RDRHQVYEASLSFKQGVQFDQSSPVVWTLIGNLHYAKNEWMPAQKKFEFILSKIYNNK TPDPYSLVALGNVWIEQLLNPSRKKEDEKKYMDRALQMYQKALKLEPKNMYAANGIGC VLAYKRNWNDARDVFSQVRESTSEFYDVWMNIAHVFMEREQWMSAVQMYSSAMKKFRK ENDAMLLHYLAKAYYRANMLSEAKEALERAMLDQLDNTQLKFNYAIVLKKSAKEILRG HKMTSQQVNTAISDLTFAEKIFQYISKNDDRQASHTGMRISRTACSEEAKNCRDLLTQ AKHKLAAAQTQDEEERRLIEKQEKEKIALKNKLMEEARAREEAEKKRIEDAKNLRLSF IEMTKDVLRLPEIVEEKRRGGGGRKRRNDDGDEFVNDSSDAGNYDGEEGGEDGERRER RKKDKAAKKASRKKRERRDSDGGSDSNRRDEKKRKRKEEKARKLEEKLSAKQSAKIKS RAFLSSSESSDDDKPKPAADSSDEEEDERPPVNEFDSPDSNAGSDEEMAAAKKKKKKA VVDSDEGSDNSDDDRPIIGASDEMSYFSEDDDDKPAAGGASSSSDSDVPKEKVVESDS D" CDS join(1226857..1226952,1227192..1227344,1227392..1228135, 1228184..1228320,1228366..1228831) /gene="Cbr-dars-1" /locus_tag="CBG_10076" /standard_name="CBG10076" /product="Protein CBR-DARS-1" /note="C. briggsae CBR-DARS-1 protein; contains similarity to Pfam domains PF01336 (OB-fold nucleic acid binding domain) , PF00152 (tRNA synthetases class II (D, K and N)) contains similarity to Interpro domains IPR004523 (Aspartyl-tRNA synthetase, class IIb, archea/euk type), IPR004364 (Aminoacyl-tRNA synthetase, class II (D/K/N)), IPR004365 (Nucleic acid binding, OB-fold, tRNA/helicase-type), IPR002312 (Aspartyl/Asparaginyl-tRNA synthetase, class IIb), IPR018150 (Aminoacyl-tRNA synthetase, class II (D/K/N)-like)" /note="Predicted" /db_xref="GOA:A8XAB8" /db_xref="InterPro:IPR002312" /db_xref="InterPro:IPR004364" /db_xref="InterPro:IPR004365" /db_xref="InterPro:IPR004523" /db_xref="InterPro:IPR006195" /db_xref="InterPro:IPR012340" /db_xref="UniProtKB/TrEMBL:A8XAB8" /protein_id="CAP29586.1" /translation="MADVPEGEQPKLSKKELNKLARKAKKDEKAAEKGENQQQSAAME QEDYSKDFYGSYGLVNSKEKKELNFLRVKEVNVANATKDIWVRGRVHTIRSKGRNCFI VLRQGVYTVQIAMFMNDKISKQMLKFVSSISKESIIDVFATINKVETPIESCTQKDVE LLAQQVFVVSSSAPKLPLQIEDASRRAPTDEEKNSEQENQLAVVNLDTRLDNRVLDLR TTTSHAIFRIQAGICNQFRNILDARGFVEIMAPKIISAPSEGGANVFEVSYFKGSAYL AQSPQLYKQMAIAGDFEKVYTIGPVFRAEDSNTHRHMTEFVGLDLEMAFNFHYHEVME TIAQVLTQLFKGLQQNYQDEISAVGNQYPAEPFQFCEPPLILKYPDAIALLREHKVEI GDEEDLSTPVEKFLGKLVKEKYHTDFYVLDKFPLAVRPFYTMPDAHDGRYSNSYDMFM RGEEILSGAQRIHDADMLVERAKHHQVDLAKIQSYIDAFKYGCPPHAGGGIGLERVTM LFLGLHNIRLASLFPRDPKRLTP" CDS complement(join(1229042..1229134,1229672..1229762, 1229812..1229873)) /gene="Cbr-nlp-36" /locus_tag="CBG_10077" /standard_name="CBG10077" /product="Protein CBR-NLP-36" /note="C. briggsae CBR-NLP-36 protein ;" /note="Predicted" /db_xref="GOA:A8XAB9" /db_xref="InterPro:IPR040279" /db_xref="UniProtKB/TrEMBL:A8XAB9" /protein_id="CAP29587.1" /translation="MAVDLKQHLELADYLGVVAVWCIFFSILFVLSVIFNFVCIKKDD DITALERWGYKKNIGVKLGPHRRSMVARQLPQTIEMD" CDS 1230113..1230130 /gene="CBG25911" /locus_tag="CBG_25911" /standard_name="CBG25911" /product="Protein CBG25911" /note="Predicted" /protein_id="CAR99422.1" /translation="MGLIS" CDS complement(1231931..1232491) /gene="CBG10078" /locus_tag="CBG_10078" /standard_name="CBG10078" /product="Protein CBG10078" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XAC0" /protein_id="CAP29588.1" /translation="MPARTSSSSTKSIIKSRGIKGIEKKLTASQYVGKYTEMLLLGVR RTYALERLIDADCPVRAFEENLTEKVLEKHIAPLGMYTYHLNKLAEKFAEIRRKDLIN TQRKLAKSRECNAYIENQKMILEQKTQEEVNELFTAAMGSTRAPKKTSMKPDYSKYRI VKRSKSSTSSTPTSSSSSSSSSPTSQ" assembly_gap 1233177..1233577 /estimated_length=401 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS 1233647..1233970 /gene="CBG10079" /locus_tag="CBG_10079" /standard_name="CBG10079" /product="Protein CBG10079" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XAC1" /protein_id="CAP29589.2" /translation="MYTYHLNKLAEKFAEIRRKDLINTQRKLAKSRECNAYIENQKMI LEQKTQEEVNELFTAAMGSTRAPKKTSMKPDYSKYRIVKRSKSSTSSTPTSSSSSSSS SPTSQ" CDS join(1234587..1234596,1236049..1236500) /gene="CBG10080" /locus_tag="CBG_10080" /standard_name="CBG10080" /product="Protein CBG10080" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XAC2" /protein_id="CAP29590.2" /translation="MPSKRLVLGVRRTYALDRLIDADCPICAFEENLTEKVLEKHIAP LGMYSYHLNKLAQKFDKIRRKDLINTQRKLAKSRECNAYIENQKMILEQKTQEEVNEL FTAAMGSTCAPKKTSMKPDYSKYRIVKRSKSSTSSTPTSSSSSSSSSPTSQ" CDS complement(join(1246732..1246789,1254520..1254566, 1254611..1254861,1254920..1255241,1255568..1255587, 1255645..1255690,1257701..1257847)) /gene="CBG10081" /locus_tag="CBG_10081" /standard_name="CBG10081" /product="Protein CBG10081" /note="Predicted" /db_xref="GOA:A8XAC3" /db_xref="InterPro:IPR040279" /db_xref="UniProtKB/TrEMBL:A8XAC3" /protein_id="CAP29591.1" /translation="MPKQEFDNWDLWAGALCFLSFMLFVFFTSCTCINFCCVKEDDEL TKMEIKHVFHSLITMFFAKTGGVKGKLEPPTNVLVHFIECQQARRGDALRRRCAPYAP YMPHTGVLSLYPIHRRVLRRPSIMRMRAGPVRPKWKPYIRRPLYFACKWAGLRVSSGN ISVFDGFSRLFWKIQEFPESLEIFKFCLFFKFTNSSVSRAFFRSMPSKITSISKNFVI CYFSLGCGASNSPTIGTTLAERSSEETPGTSDGLNNWLICFTIFKKSFEYLLKKVDND NTSTVSQDALKNRSLFSLSN" CDS join(1251626..1251753,1251877..1251994,1252045..1252128, 1252628..1252764,1252810..1253052,1253143..1253800) /gene="Cbr-bre-3" /locus_tag="CBG_10082" /standard_name="CBG10082" /product="Protein CBR-BRE-3" /note="C. briggsae CBR-BRE-3 protein ;" /note="Predicted" /db_xref="GOA:A8XAC4" /db_xref="InterPro:IPR001173" /db_xref="InterPro:IPR027389" /db_xref="InterPro:IPR029044" /db_xref="UniProtKB/Swiss-Prot:A8XAC4" /protein_id="CAP29592.3" /translation="MNCEVKHALHCAVLVAWIVCFAYFCGVFTEPAEGTVPESPVASY GLVWTICLYLLRFTALLVLPQCLCNLCGLMMFNAFREKVQLKAAPLLSPFVCFRVVTK GNFPLLVKENIDANMKTCFEAGMENFIFEVVTDKAINLPPNPRVREVVVPTAYRTKSG AKFKARALQYCLEDDVNILQPTDWIVHLDEETLLTTNAICGILNFCEDGKHQFGQGVI TYANGDIVNWLTTLSDSFRVADDMGKLRFQFKLFHKPLFGWKGSYVVTQVEAERDVSY DHGMEGSIAEDCFFSMVAMKHGYTFDFIEGEMHEKSPFTMWDFLQQRKRWLQGILLTV HSSKIAVVHKALLALSLYAWATMPLTSLQVFLCPLFPLPRCLPFDFLLSFVGALNLYM YIFGVVKSFSHKYRNSFLRLGMYLAGALMTIPFNILIENAAVLVGMFGRKDQFYIVNK DIQTV" CDS complement(join(1258080..1258178,1258226..1258373, 1258430..1258785,1258832..1259009,1259058..1259229, 1259286..1259364)) /gene="Cbr-tag-342" /locus_tag="CBG_10083" /standard_name="CBG10083" /product="Protein CBR-TAG-342" /note="C. briggsae CBR-TAG-342 protein; contains similarity to Pfam domain PF02269 Transcription initiation factor IID, 18kD subunit contains similarity to Interpro domain IPR003195 (Transcription initiation factor IID, 18kDa subunit)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XAC5" /db_xref="InterPro:IPR003195" /db_xref="UniProtKB/TrEMBL:A8XAC5" /protein_id="CAP29593.1" /translation="MPPKRSRKRTSDGPKLAVGASAQIEKLEGSNKMEPSIRNLVATL MFTSGDDENPLEENEDFVLDILKNELVMLLKDVVAVHSTKFPLVKLEHILPVLKDQRG IISRFIKYLQNRVEMARFMKKKTYSSNGTKEDVENDDDYDKNQVVEDEVDPIDDIGEI GGEEGEILKKKSKNVGTVTIEENLLEEVKQAFSIAGFNFKSFQNFVDEAHNEQVRALQ IVMDDMTREEYNRYAEARRISFQDQSPIPYNFSSFEFSTSNKKRKGTVSNRQLLLSWL GNPPINGEPAHVFLAFLAKEIVSVIVGAALVERRKMSPAEGGLLHHCYYEEPFRKNKR FRKYGRFLF" CDS complement(join(1259691..1259837,1259883..1260005)) /gene="Cbr-baf-1" /locus_tag="CBG_10084" /standard_name="CBG10084" /product="Protein CBR-BAF-1" /note="C. briggsae CBR-BAF-1 protein; contains similarity to Interpro domain IPR004122 (Barrier- to-autointegration factor, BAF)" /note="Predicted" /db_xref="GOA:A8XAC6" /db_xref="InterPro:IPR004122" /db_xref="InterPro:IPR036617" /db_xref="UniProtKB/Swiss-Prot:A8XAC6" /protein_id="CAP29594.1" /translation="MSTSVKHREFVGEPMGDKEVTCIAGIGPTYGTKLTDAGFDKAYV LFGQYLLLKKDEDLFVEWLKETAGVTANHAKSAFNCLNEWAEQFI" CDS complement(join(1260659..1260802,1260848..1261382, 1261426..1261535,1261582..1261653,1261702..1261810, 1261859..1261917,1261962..1262033)) /gene="CBG10085" /locus_tag="CBG_10085" /standard_name="CBG10085" /product="Protein CBG10085" /note="contains similarity to Pfam domains PF12695 (Alpha/beta hydrolase family) , PF07819 (PGAP1-like protein) , PF12697 (Alpha/beta hydrolase family) , PF00561 (alpha/beta hydrolase fold) contains similarity to Interpro domains IPR000073 (Alpha/beta hydrolase fold-1), IPR016812 (Protein phosphatase methylesterase, eukaryotic), IPR012908 (GPI inositol-deacylase PGAP1-like), IPR000639 (Epoxide hydrolase-like)" /note="Predicted" /db_xref="GOA:A8XAC7" /db_xref="InterPro:IPR000073" /db_xref="InterPro:IPR000639" /db_xref="InterPro:IPR016812" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8XAC7" /protein_id="CAP29595.1" /translation="MSEDDEMDMLPDLQPVMPHSMSHRPNDLLRRAVTHGRPPPAPSA SSYGKRKEMAALPWSDFFDKKKEVNIDGDIFNVYLKGTQGPIFYLLHGGGYSGLTWAC FAKELARLVDCRVIAPDLRGHGDTKCADEHDLSKETQVKDISEILNKVYGRTDELVTI VGHSMGGALAVHTLNAKALSAKVAALIVIDVVEGSAMEALGGMVHFLHSRPSSFDSVD KAIRWCLSSGTVKNQTAARVSMPSQVREVSENEFTWRIDLTTTEQYWKGWFEGLSCEF LSCFVPKLLVLAGVDRLDKGLTIGQMQGKFQTCVLPRVGHCVQEDSPEKLADEVARFV IRHRIAKQNLNIPNFAPSQDPAIRLYEQRHHH" CDS join(1262307..1262531,1262576..1262732,1262781..1263263, 1263310..1263458,1263504..1264105,1264150..1264243, 1264286..1264489) /gene="CBG10086" /locus_tag="CBG_10086" /standard_name="CBG10086" /product="Protein CBG10086" /note="Predicted" /db_xref="GOA:A8XAC8" /db_xref="InterPro:IPR019176" /db_xref="UniProtKB/TrEMBL:A8XAC8" /protein_id="CAP29596.1" /translation="MTADSLRERFRNHNADSSLLNTSAASNRSAFEDKMSPVCTSRYI NNNQRIEFMRVNTLETRIKWHIVLLTIFSIDHFVFNSSITSFILLFGFFPAAVYSTVS SLVIIYSLIMIGSCTFEIKFPNAVKNLFQSKSPVKKVPTQCTPSANDSQHLVNTSVNS NDLSWVDAHRFGTPLFKSSQLKQSPSPVKTSFHMNTSVSDASGIFEDSKGGWKSPAAY SKPTDTIHTRKQLDVLLKSNKNDAPIDLNASQAFSSIWTVFDLGRNGQNNGNNTWQLS EEIAEDQSTANTSYRMKIGKNGRTEVKMVRRGKDGEIEEEDEDELNRLHKIMNTAKNT PDNKTGILKRSNSMDRSGVRSRRRSHGSPERTSGSENEMRYRTGELLTEEQQKRAEFL TRAWIRNTVILPLAQHIDKVNKLLDKEHANPPLRIGSSSVDTLKLAAMERDALKSSDL PFLLPFLSVHPNQKYLVSRIKELSVSQFMDVYKWDSGGTEPSDDAGQKTRLVRREWND SLPTDAVLVFDLFLAYMDAQLNSNCLVGDNRLDQPFTSRFCVKSPCKPNSAQKSPFSF YLYMVTQSPPHFEFVHIDENGYAVKCNVLRQTSNLFRAIAQFVHFVKYENHGYIDRTS IGPSGINMVVVLA" CDS complement(join(1265364..1265499,1265543..1265637, 1265684..1266397,1266445..1266531,1266849..1267043, 1267143..1267382,1267431..1267739,1267894..1268142, 1268188..1268299,1268378..1269487,1270173..1270276, 1270320..1270367)) /gene="Cbr-spk-1" /locus_tag="CBG_10087" /standard_name="CBG10087" /product="Protein CBR-SPK-1" /note="C. briggsae CBR-SPK-1 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) (2)contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:Q61IS6" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/Swiss-Prot:Q61IS6" /protein_id="CAP29597.2" /translation="MLSILHSLSWMAHWINPTATIAPSTPPQAGEKNANVKNGTVQTN GVNHTERLAGRAPNLLHPAIDYPGITSYEAGGSLILTDIFPTVLFMFVVLFCRWFNGF APRQERFQRLEYEAILRRRRFRVQSEESEELEDHEAYSETDICTQLIASSANVACNIN VDLVNQNRFYFFVKQNNEDETAVPSDVPPPETSIKNEDTEVNLVFASAEDNGYISSTF EVSETSLMVTSEVYEVEKVSVNEDQSSRPVNVIVNESDDEQSLRSQDGSRCSDEAMNS CMSASEDEDVESQEDSYHVNDATEDSVSSIKTQEDEPIEEELASCHSDEDDHQNEVLG DEEASKYDNLPVEMRSAKEGDESEGTIDSSVSSSTSSTPDDDEDDSATSYDSDDIEIQ MFEYDLGTVCASASISIPRPSIIPKKNKKAEVNANEERMDDVSVSPGRSDSPGGGGGH SDSFQDPLDPGEQLGSDDEEQEDPRDYKRGGYHPVNIGDVFNSRYHVIRKLGWGHFST VWLAWDTQEKRFTAMKIVKSAEHYTEAALDEIKLLLSVRGADPEDTGCHKVVQLLDEF TVTGINGQHVAMVFEVLGCNLLKLIIRSNYRGLHLEQVRKICKQILEALRYMHEKCGI IHTDIKPENVLITMSREEIKIMAQHAVVARKMNMKMSGSAVSTAPDHLVKMAQENMTK NKKKKMKKKAKKQREKLEAELAGLEGLKMDANGLQEAYNNAPQNGIRMRPPSLLFNGP IPQLLQGSSCVNTPSSPRSVPPPPALYPQAGGVCNQTYHLSQVILNEQVELESFNTSQ VEDVNIEDAVNGNGNGTNNKIELKSPDRFDRTTLTPFSDPESKIGELASPSSEFLSSP MSMLPPGGVLPAPPVGPNIADPYCDIDVKIADLGNACWVNHHYTDDIQTRQYRALEVL IGSGYGPPADIWSTACMAFELATGDYLFEPHQGDNYSRDEDHLAHISELLGQISPSIY KKGKHWREFFHKNGNLLHIHNLKPWSLYEVLRQKYEWSHEDAQQFESFLRPMLDFDQE KRATANDALKHPFLLPFGGKAPRDPEVLQRLYPDGQVPEALDGNQEVYRDENDSNSAS ERSANRSAGSDDEEEFHMDRPGPSGVINEPADVSEIESFQLNLQ" CDS join(1271509..1271581,1271731..1271856,1271908..1272004, 1272052..1272108,1272155..1272281,1272838..1272978) /gene="Cbr-rheb-1" /locus_tag="CBG_10088" /standard_name="CBG10088" /product="Protein CBR-RHEB-1" /note="C. briggsae CBR-RHEB-1 protein; contains similarity to Pfam domains PF00071 (Ras family) , PF04670 (Gtr1/RagA G protein conserved region) , PF00025 (ADP-ribosylation factor family) , PF08477 (Miro-like protein) contains similarity to Interpro domains IPR013684 (Mitochondrial Rho-like), IPR003578 (Small GTPase superfamily, Rho type), IPR005225 (Small GTP-binding protein domain), IPR001806 (Small GTPase superfamily), IPR003579 (Small GTPase superfamily, Rab type), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR006762 (Gtr1/RagA G protein), IPR020849 (Small GTPase superfamily, Ras type)" /note="Predicted" /db_xref="GOA:A8XAD0" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR020849" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/Swiss-Prot:A8XAD0" /protein_id="CAP29598.1" /translation="MSSTATQPRYSLNRKVAVMGYPHVGKSSIVQRFTQNMFPDRYET TIEDQHTKHHTAFHRDFNLRVTDTAGQQEYTVFPRSCSLDVAGFLLVYAIDDRKSFDI CSSIYEKIISVYGDPSIPIIIVGNKCDLGTQRVVQQEEGKELAKQCEAKFVEITARET NRVNEVFELLLREIEISRGNLRGPPQQQTKEQTSSDPNDPKNCVIS" assembly_gap 1274405..1277584 /estimated_length=3180 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(1278604..1278713,1278765..1279053,1279100..1279252, 1279306..1279629) /gene="CBG10089" /locus_tag="CBG_10089" /standard_name="CBG10089" /product="Protein CBG10089" /note="contains similarity to Pfam domains PF06456 (Arfaptin-like domain) , PF03114 (BAR domain) contains similarity to Interpro domains IPR010504 (Arfaptin homology domain), IPR004148 (BAR domain)" /note="Predicted" /db_xref="GOA:A8XAD1" /db_xref="InterPro:IPR010504" /db_xref="InterPro:IPR027267" /db_xref="InterPro:IPR030798" /db_xref="UniProtKB/TrEMBL:A8XAD1" /protein_id="CAP29599.1" /translation="MGLLNRKSSIKLYRKNHATTVATRSPISHCPLEKCPRIDTAQVA AKVESFKKWTIGTFKNSKQQLLEHMGKIDKTVDPEFEAQCEVLKDIHRRYGHVVAAAK NFSQVLSQMAEAEKKFSESFYQLSLKEEQIKAQCTTTSETMRGVGEQATSLDACLKYF ISSMETVYNQTITDTLHTIYNTESARIEYDVDRNDISAAANPPQGQQPKTLPAGTAEK CEERKLKYEKLKNDAKIKMRLLEENRISVVATQLEKLQSALAAYYSGNAKLLEASVRE LSILQSPQPSFIPTM" CDS join(1280560..1280641,1280695..1281003,1281054..1281122, 1281170..1281642) /gene="CBG10090" /locus_tag="CBG_10090" /standard_name="CBG10090" /product="Protein CBG10090" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XAD2" /protein_id="CAP29600.2" /translation="MCRIAVLDISPNCMMRELVDSCLLVNPALERTEEDKIALDKFEL GYIVKWLGTNDKKLLYIESIAILRSTPERGDQKYQNMMSRALELFKRILAFEAKTVST AIVQRVLDKLINNLRKEAFHESLHFKYHRLECAYIYMVRQSYPELRHDEHSCLATHCF DLLTMQGVERGLDESYEETVNINLNMPNRIDKALKEMCPPRVSMPKPKSNPKSMVTFD VNAPEMNPTAPLGETTIAFFESNTNVVPPPTQRPSNVTIRRTSNVTIRRYQANQDALD DMTQIFDRNLTFTLPPRSMAPLRRSARLAARNGE" CDS join(1284464..1284551,1285931..1286001,1287768..1288042, 1288398..1288513,1288561..1288649,1288705..1288902) /gene="CBG10091" /locus_tag="CBG_10091" /standard_name="CBG10091" /product="Protein CBG10091" /note="Predicted" /db_xref="GOA:A8XAD3" /db_xref="UniProtKB/TrEMBL:A8XAD3" /protein_id="CAP29601.2" /translation="MVSNLTSVFRSRNQNQNKKASKDKTGTTVVSTSSEDQPQPTPAM VLVPTVTIQEAPKEVEIVVAEQPELIPSGSIIVQEVEILTPNEDEVKPDDPEQKSQDE CAMCQKVGNYVRSSYEAGKARFQQLVNRLLDPSLHVTIRSEISYFSGPFSPLFDALCK PEPFLLSEELPKVMCEVVDEIFSTLSEFFRTIGRGFSVFATLFTAIWHGLSENVFYGF HELGENLGENIGHLIHFVVQFFHQIIHLFLSSIATVAGAIAGVFTSLHDYLEPTRAED VW" CDS join(1289667..1289698,1290052..1290187,1290236..1290360, 1290407..1290914,1290962..1291243,1291431..1291529, 1291562..1291729,1291777..1291940,1291986..1292086, 1293165..1293259,1293421..1294091,1294139..1294508, 1294556..1294740,1295218..1295526,1295573..1295785, 1295838..1296090,1296137..1296745) /gene="Cbr-emb-30" /locus_tag="CBG_10093" /standard_name="CBG10093" /product="Protein CBR-EMB-30" /note="C. briggsae CBR-EMB-30 protein; contains similarity to Pfam domains PF00782 (Dual specificity phosphatase, catalytic domain) , PF00400 (WD domain, G-beta repeat) (2), PF12894 (Anaphase-promoting complex subunit 4 WD40 domain) contains similarity to Interpro domains IPR020422 (Dual specificity phosphatase, subgroup, catalytic domain), IPR016130 (Protein-tyrosine phosphatase, active site), IPR001680 (WD40 repeat), IPR000340 (Dual specificity phosphatase, catalytic domain)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XAD5" /db_xref="InterPro:IPR000340" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR016130" /db_xref="InterPro:IPR020422" /db_xref="InterPro:IPR024977" /db_xref="InterPro:IPR029021" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:A8XAD5" /protein_id="CAP29603.2" /translation="MVRVCRVVPKDWHKFQPLGDVIPRTRFIVFKTPINSSLSNKLRK DQRFTTNDLFRKLAERGQHLGMVVDLTDTERFYDKEDITGLCIQYEKVNCPGRGFIER DDCVESFNQAIQDYTDKCEDQDALIGVHCTNGINRCGYLICRFLIERLGWSSHEAIDA FEQARGYSIQKGAYVMALHKAAKESRTKRVDSDSDSSERRKKKKNKRKHHGDEGAINE ANMIHAILGELGQQAAGVSGSGYHSSPNGINPPDPSAQHHQTHWGYAAKKTKYSQLNQ PLANSTPPDASGNTPLEEEELEEEEYEEVEEEVGPDASKGQSVSSKRRARRNRMQNYM KVMARGRFHEIQAMREEVALTHGSARDIIYSIFMNFVITLSGFLFLTSRCLNIDICSR PSMDFSIIKAEVINSRRTFRAPFKITSMCFSPHNDLIAMGSKSGDIMLKRTTWKMIWK TNVSMIPAVGTECKSDSTVSALHFSPDGRFIAAATDTGIIHILDVEAGKVRYSVKASS DGITKLQWERVRDDESNSKKIGKGLKPPGKNLEVVEGALELGTSIPEISREEIGFVYE RLDEDGSAFKHDETQKENLERTIIPEDVYIESFQGTILLAPIDSFIPKIVVLIAGVFP FMEIDVESVVREFNQDVIMGYESVHYSSAFEGVSFIATTMGPHLDCKHKEQAPPVVDS TQPGPIVQTLVFTVKLDLEPSIWEVALRYLRLHFAYNLYSISLDTTKQNWGTQVAALH SLFDTKTKAVKIGEVLVEMLLSGSTDQAGEAFLERGLGTDGLESIRTFTSKHLPEVCR LARGQLASAARNLCFQRCEFATAMKRYQAHIKIKEDEDFLYQELSSKYQPQSNAWLNS LDDITVQLTTKTRMLGLNCLTMMQELTHLAKWISLTKPFAKTMKVNALMKIKRMEIKS ILEYIVKNFFPDKKVAEEIEKKLFKLADTVKEQREKDKKEGFDEIAFLDKCEANAKVH RKKIVDKFKVKFKFDALTDENDDVAMKIDREPGTSAAAENVNPPIAMNTSKFETSEEI PPTIDLDRVGSFFEDELSEKALAVLPKCDVVFDKHLRNKGAKMNDPEIRKIGIKKLLT DLADLLCTPQKVNCDAAGVIKKPEVLFVHELCSGQGHRGYVDIKISDVTPPYFKEHAF NNLVGMKRAIQITAIEKDGLSSIVITPNCDVTEEMVATTTEHKTAMSRSYKFDAVGVH VSQTSENTPPPAQGEAMETDQNELRIDVNVDTIQAEYDTLSEYCQIHPLRHGELALMV IIPLTLCLLSNYFQGKFKANQEGTGLLTRLMRSISSYPHANASQKDVFAVNYQTDGKK EVSIDTLIIHPTTQLTALIHDEGTKITLGDLKPEVPIIVDPDTEKKYEKKTFREYQRR REHYREHNNGSVNVNDVQYDVLVQEAMDSGRELADPIDADDDDEDDEDDDDDELEEGE TDH" CDS complement(join(<1292143..1292361,1292403..1292867, 1292918..1293064,1293067..1293126)) /gene="CBG10094" /locus_tag="CBG_10094" /standard_name="CBG10094" /product="Protein CBG10094" /note="contains similarity to Pfam domains PF00725 (3-hydroxyacyl-CoA dehydrogenase, C-terminal domain) , PF02737 (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain) contains similarity to Interpro domains IPR006108 (3-hydroxyacyl-CoA dehydrogenase, C-terminal), IPR006176 (3-hydroxyacyl-CoA dehydrogenase, NAD binding), IPR006180 (3-hydroxyacyl-CoA dehydrogenase, conserved site)" /note="Predicted" /db_xref="GOA:A8XAD6" /db_xref="InterPro:IPR006108" /db_xref="InterPro:IPR006176" /db_xref="InterPro:IPR006180" /db_xref="InterPro:IPR008927" /db_xref="InterPro:IPR013328" /db_xref="InterPro:IPR022694" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8XAD6" /protein_id="CAP29604.1" /translation="MFTTKCAMQNIRNVAVVGSGHGSGIAQVSASSGLNVILTDVKQD SIDNAMKSIHKSLTRISKKQSGSDKEKADYVTLTMSRIKTSNNVSTAVTDADLVIEAA IENIDLKRGLFAQIEQSAKKDAILTTNTSSLCLEDIAKGIDDKTRFGGLHFFNPVPMM KLLEVIRSDQTSDETYATLIKYGKAIGKTTVSCKDTPGFIVNRLLIPFLFEAVRMYER EDASMTDIDAAMRLGASHPMGPFELADYVGLDTCKFIMDGWATKYPDNPTFAPSPLID ALVSEGKLGRKTKEGFYSYKK" assembly_gap 1300648..1300777 /estimated_length=130 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS 1303942..1304175 /gene="CBG25912" /locus_tag="CBG_25912" /standard_name="CBG25912" /product="Protein CBG25912" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHM2" /protein_id="CAR99423.1" /translation="MVFKFDLTCLSGLTSSGKLQPRVVCVSVSEDSNYVPSLPGELIL LSKRSLVQSFPSLYFQVCISIPKTSLVSHENIM" CDS join(1311693..1311745,1313799..1313862,1313935..1314010, 1314057..1314193) /gene="CBG10096" /locus_tag="CBG_10096" /standard_name="CBG10096" /product="Protein CBG10096" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XAD7" /protein_id="CAP29605.2" /translation="MASLINKISEFRIPGKERTLGKSANMLSRLFLLLSFVILCHSIV SEISHRFLHRDPEYEGRVYYEPLYTSKDFRLGGSAQLSPLYEMTNSHLLNLADLLRKR TETQTPY" CDS join(1316316..1316391,1316442..1317322,1317394..1317897) /gene="CBG10097" /locus_tag="CBG_10097" /standard_name="CBG10097" /product="Protein CBG10097" /note="contains similarity to Pfam domains PF00270 (DEAD/DEAH box helicase) , PF00271 (Helicase conserved C-terminal domain) contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR000629 (RNA helicase, ATP-dependent, DEAD-box, conserved site), IPR014001 (DEAD-like helicase), IPR001650 (Helicase, C-terminal)" /note="Predicted" /db_xref="GOA:A8XAD8" /db_xref="InterPro:IPR000629" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014014" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8XAD8" /protein_id="CAP29606.1" /translation="MSDSSSSDGEDNQKFLTNRKKTLTRKKAVAEAVENEVEEIEEEK TFAELGVSQPLCDACLRLGWTKPSKIQQAALPHALEGKDVIGLAETGSGKTGAFAIPV LQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIVAVIVGGVDMAAQAMALA RRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPKE RRTYLFSATMTKKVSKLERASLRDPARVSISTRYKTVDNLKQHYIFIPNKYKETYLVY LLNEHAGNSAIVFCATCATTMQVAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAR EILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGLAITVVTQYDV EAYQKIEANLGKKLDEYKCVENEVMVLVERTQEAMENAKVEMKEMDEKRKSGKKRRQN DDFGDTEENSGRFKMSIKSMGGGKGGGGGKKKKMKK" CDS complement(join(1318104..1318348,1318392..1318765, 1318935..1319041,1319093..1319212,1321234..1321344, 1321393..1321457,1321737..1322012,1322063..1322822, 1323046..1323204,1323782..1323956,1324004..1324610, 1324655..1325735,1325787..1326056,1326106..1326321, 1326457..1326513)) /gene="Cbr-rgr-1" /locus_tag="CBG_10098" /standard_name="CBG10098" /product="Protein CBR-RGR-1" /note="C. briggsae CBR-RGR-1 protein; contains similarity to Pfam domain PF08638 Mediator complex subunit MED14 contains similarity to Interpro domain IPR013947 (Mediator complex, subunit Med14)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:Q61IR6" /db_xref="InterPro:IPR013947" /db_xref="UniProtKB/Swiss-Prot:Q61IR6" /protein_id="CAP29607.3" /translation="MNNIPIKMSLDFFVFCFGQSEKLSSQLRGALAADSPAMAARSSL DPTGSVLSLDESSGISDHEGFSSAEQDNFSNRKPEDQAKNSSDSEEDVEAKNPLPDVP PGCGPPTIPLNVLLDFSIQHVYHEITVLAELMQRKTNDQGEQERKMSLVHFAHATRSQ FLKLVALVKWIRVSKRMDVCYSIDYLLDLQSQYFIDTADRLVAMTRGDLELARLPEYH IAPAIDVLVLGTYNRMPSKIKEAFIPPAKITPREQKQVCARLNQLIETRLSRLSSGIP PNYKEIHVANGIATLLVPGEFEIKITLLGETEMTKWSLLNIKILVEDYELGMGLPLVH NLQLNQIHGVLQSRMDVAVNPVKEAFFNLHSFCVSLQLDVLYCQTSRMAAGRLRENIV IEKYDPKERMLVVGYWVKRSKNKRLTVGQVKIDAQYRVQIYEDKDDKLGGLKVRHFPH APRLGTIDCASGMLSMDRMLSETFAVRCSERLMRLRRILEAAEPLLEVRMTGSNVPTL SLSLLPDTSSNEEMLTVSVNSFCGKVICNINVLNSENDDLVAFAKALYSSRCSGQTIR DYLQKLRTSLVIERYRRSVAALPVREIKETELLPFVKVMLREAPKQRIILQYTRSENY YLIVGFIPEGEDVVTTKLQLLECDDERAQFIPLDNDTEVFQTAVADAVEQGTMRFKNC DDRISLLEECSREQRLAFAIITVEDRITYMYLATELQKKGVGVELRRDDAHVPGGLAL HITNVKTVVPFDAAEFFKCCVRSCLRLDNRTRHTFQFEMCFENIPLVRDVPHGLAHRR EGDKDTTWVQEISQVNQMTPEKLVEGIIHRLMRYLYMYKVVHQFSLAYEQYFKQWCNV EVYTFHKLVVSYGENRDMLMVLAFNVKSQNPGSQEDYFLMNFGQTMPHSQFNTPEVDW LKKPRYNPHAMMSQLLRDELKKNNDLIYIMHYLCETIRPFMVIGKFGRIRFQSQKSLS QLIGPEVFFPYRLKYHLAVLDLTTLRLMRGNVILEIKMLEGQKVAVRDVSRYRARCAG LYQLFSNIDPVTTEIMCEELEIPESDNKINAGPTMWKPEQFMDAVDVPHEDDPRMKIT SLPILMTHDTIIKACDFQEIDGHVTCPLDEYLYSISYLQRALLTLERMSPRAQQGPAN NLFSGYVTVVDAKPDYVRFKATQLNGDGTNATAMVYYKIYLCPEAMTLKIHIEYDEGT NSEATPKNLTALSTYFEKVVFRCGDEYALQSYVVMTRVTSFGATASIANLMNAQMDIS LESKCCLQLSLTYNNTTSKKLAPATKVDQQLNNMIINVIISQSRKADSFSVLRFIYRI KEWVICYSCLKKSEVNFVTVPSELNKQLIDDVNTEVKTTGKCAIWALVSLVSDRFRSG EWNPSNQDEPIISTVAPPAPQQYVNPPSVAPGSIAPPGSGAPQQQQHQQQPPPSVMQP GSMMGPQSVNAHQYGMHRQMGGPPSMQMNPSSVGPPPGSVGMPGSVGPGSMMNPGSHQ QHMMNPGSVGPGSVGGPGSVNPGSVGYPPWGPGGQQYHHHMQYPPQ" CDS join(1320721..1320834,1320900..1320988,1321115..1321148) /gene="CBG10099" /locus_tag="CBG_10099" /standard_name="CBG10099" /product="Protein CBG10099" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XAE0" /protein_id="CAP29608.1" /translation="MHSRTLAYSLLLIAIALCAVSVAYAPRVSFPFLCIISTNIRGVG DVPSMFFSPFRMMGKRNQFYGLFKKIRSNEVVDY" CDS join(1326822..1327084,1327131..1327628,1327680..1328296, 1328348..1328568) /gene="Cbr-gpr-2" /locus_tag="CBG_10100" /standard_name="CBG10100" /product="Protein CBR-GPR-2" /note="C. briggsae CBR-GPR-2 protein ;" /note="Predicted" /db_xref="GOA:A8XAE1" /db_xref="InterPro:IPR011990" /db_xref="UniProtKB/TrEMBL:A8XAE1" /protein_id="CAP29609.2" /translation="MMDISVSSREEEGPRDEIINSMLNSARSAMKLGMFEEAMGRLEE ILECGTTDIQLLGRIYMYYGRVLRYLKHETKALEFFEHELNVLKLTFIYPKACDSSRR IVELALSMGKISKAKRCAEDLIDYTSNRKEGETFVRIARTLLVTVCLEGYERKLEGNP EENKRLLTISAEQISKIKQINEEHPDNISKVEILMLEAKCLALQEKQRESHQTYQDCI DLCIKTDQLANVHRAYYEMALYAEGNMLIFIVNNLRSASYYVSKYGTTREVAKYKREL ADKLLAFGNPHEAYCNAMEALELIRQQNLNEYLKDTLLLVAKCLAALGRRQQSAYFIV LGSVLTIKQDCFEKFYKLIDEVMTAERNDTEEGKDVSLALDASADPVAPNEVVTKVVV KLEHATNVETWRMVVNGIIEDQKRPAPVVEETPKENEEPMDFMDLICKMNSRMDDQRT AMPASIFAAPRPISAASKKTTKSHRILPGFRANIAKIQNMKFDGQTVNKLLKRSKKSK TSLHSTSTQGDDTRSDTDATVLSK" CDS join(1330053..1330077,1330316..1330506,1330573..1331283, 1331332..1331523,1331568..1331933) /gene="CBG10101" /locus_tag="CBG_10101" /standard_name="CBG10101" /product="Protein CBG10101" /note="contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domains IPR011701 (Major facilitator superfamily), IPR018456 (PTR2 family proton/oligopeptide symporter, conserved site)" /note="Predicted" /db_xref="GOA:A8XAE2" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR020846" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8XAE2" /protein_id="CAP29610.2" /translation="MDAPATKPRLVPSTRFALSLVMFFGCLFTYMMRTNMSFAVVCMV SENKTDTGAEKVSRCGKEMTPVDANSSSVIGEFDWDKQTTGMVLSSFFYGYIGSQIIG GHLASRYGGKRVVFITVLGSALLTLFNPVAARSSEYALAILRAAIGFLQGATFPAMHT MWSVWGPPLELSVLTGVTYAGAQIGNVIVLPLSGFLCQYGFDGGWPSIFYIIGVAGVL WCGVWWYISSDKPANHPRISQKEKQYIVTAVEASMGKDTGKVPSTPWIKILTSPAVWA CWIGHFAGDWGAYTMLVSLPSFLKDVLGLNLSSLGAVASIPYIAYFFAINAGGILADT IRAKGLLSTLNTRRAAMLVALIGQGLFLVASGYCGCGQDVLVIIFITCGMAISGFQYA GFVVNYLEIAPPFSGTVMGTGNTISALAGIISPAVTSYLTPNGTQEEWQVVLWLTAGI LATGAILFSIFASGDVQPWAKLTAEEGHEMAPLREGEKIELATA" CDS complement(join(1332269..1332339,1332386..1332564, 1332612..1332802,1333879..1334026,1334072..1334151, 1334198..1334321,1334371..1334670,1335303..1335421)) /gene="Cbr-tkr-1" /locus_tag="CBG_10102" /standard_name="CBG10102" /product="Protein CBR-TKR-1" /note="C. briggsae CBR-TKR-1 protein; contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10328 (Serpentine type 7TM GPCR chemoreceptor Srx) , PF10320 (Serpentine type 7TM GPCR chemoreceptor Srsx) contains similarity to Interpro domains IPR019424 (7TM GPCR, serpentine receptor class sx (Srsx)), IPR019430 (7TM GPCR, serpentine receptor class x (Srx)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8XAE3" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8XAE3" /protein_id="CAP29611.2" /translation="MDQDLLIQLGERACKNAENLTLPPELNGIFFCAPSSKEGLATQV FVAIAFVLLMATAIIGNSVVMWIIYKHKVMHYGFNYFLFNMAFADLLIALFNVGTSWT YNLYYDWWYGDLCTLTSFFGIAPTTVSVCSMMALSWDRCQAVVNPLQKRPLSRKRSVI AILVIWVVSTVTALPFAIAASVNSFYTYDVVTSTVSKTHVCSAPVNTFFEKVLFGIQY ALPIIILGSTFTRIAVAFRATNEATDSSLKNNHTRAKSKAVKMLFLMVVAFVVCWLPY HIYHAFALEEFFDAAHGKYAYLLIYWIAMSSCAYNPIIYCFANERFRIGFRYVFRWIP VIDCKKEQYEYSQLFPDKMRSMAISLQKGRVNSSCLDKKIKENSSQDCVMPEKNSKKY SKVHLLSCHEK" assembly_gap 1345933..1346065 /estimated_length=133 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(1348732..1348874,1348918..1348987)) /gene="CBG09802" /locus_tag="CBG_09802" /standard_name="CBG09802" /product="Protein CBG09802" /note="Predicted" /db_xref="GOA:E3CU11" /db_xref="UniProtKB/TrEMBL:E3CU11" /protein_id="CBX33066.1" /translation="MKKILCQIFNQFIFVLLLSLFFGSLDIFVSFSFPRNLPPKLHVF FELLDFPVLKYCIFFIFVPSSISSYK" CDS complement(join(1351749..1351916,1352201..1352344, 1352394..1352515,1352560..1352647,1352699..1352808, 1352860..1353172,1353220..1353322,1354037..1354131)) /gene="Cbr-crn-6" /locus_tag="CBG_10104" /standard_name="CBG10104" /product="Protein CBR-CRN-6" /note="C. briggsae CBR-CRN-6 protein; contains similarity to Pfam domain PF03265 Deoxyribonuclease II contains similarity to Interpro domain IPR004947 (Deoxyribonuclease II)" /note="Predicted" /db_xref="GOA:A8XAE5" /db_xref="InterPro:IPR004947" /db_xref="UniProtKB/TrEMBL:A8XAE5" /protein_id="CAP29613.2" /translation="MIRPLILLTSLLLGVTNAAIQCKDNNGNNVDWFVFYKLPHLWDH PTNFPISNGTGFMYFDVNNKNWKLMPQGMDVQNNAIYYTLQQYYTSNKTKTFQYLYND EWPDSTTWSNSSGHAKGVTVFDQYTGFWMLHSIPKFPSINQFNFPSNAHWYGQMGICV SLNYASLSDVANQLFYYNTFTYVFNLPQTFAADFPVLSQLQNGLYNKNPPLTSIRVIK SLGGQNFKHFAKTGEWGKDLYNDLVGPELKSSIKVETWNHQSGDEVNLPSMCDPNHQQ STMSAKYIRLPFGVNYTSYEDHSKFVVAYSENPSKPSFPYVCIGDINRQTHQLHRGGG TMCIYDQDTYQQYANVIAEVVPCSRATVEKVDASKTNRYSRHVYDN" assembly_gap 1356738..1358768 /estimated_length=2031 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1359696..1360695 /estimated_length=1000 /gap_type="between scaffolds" CDS complement(1362070..1362285) /gene="CBG25913" /locus_tag="CBG_25913" /standard_name="CBG25913" /product="Protein CBG25913" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHM3" /protein_id="CAR99424.1" /translation="MIAVKSSTSSLVVGIVVVGGRVGEDVSARVVWVVSKPVVVVGGG FRTGKYVCQCFYRMLDLSDPLFPGTNL" assembly_gap 1362487..1362927 /estimated_length=441 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(1363574..1364062,1365046..1365141, 1365240..1365245)) /gene="CBG10107" /locus_tag="CBG_10107" /standard_name="CBG10107" /product="Protein CBG10107" /note="Predicted" /db_xref="GOA:A8XAE6" /db_xref="UniProtKB/TrEMBL:A8XAE6" /protein_id="CAP29614.2" /translation="MKRDNARSPVIGGIRHVAWLNYSFFRILWTLLFQWGAAKAIVRP IRDAAVAVVSVFSPPPPPPPTTTTALPTTQTTLAKTAPPTPPLSTTIATTTDDLDDST VVIVLVVFLILLVVSGIGIFFYMRSRKNKQQHAPNVVIMQDGSTDAETGLSTSGTSGT SGTTGTTGTTGIKTKKNKKKKKKTARETSGSASSGA" CDS complement(join(1366421..1366568,1366801..1366939, 1367009..1367233,1367293..1367448,1367588..1367791, 1367838..1368521,1368571..1368717,1368734..1369246, 1369294..1369518,1369578..1369704,1369934..1370094, 1370141..1370360,1370411..1371057,1371250..1371681, 1371731..1371975,1372021..1372123,1372987..1373129, 1373180..1373297,1373659..1373692)) /gene="CBG10108" /locus_tag="CBG_10108" /standard_name="CBG10108" /product="Protein CBG10108" /note="contains similarity to Pfam domain PF04942 CC domain contains similarity to Interpro domains IPR020003 (ATPase, alpha/beta subunit, nucleotide-binding domain, active site), IPR007026 (CC domain), IPR006150 (Cysteine-rich repeat), IPR002557 (Chitin binding domain)" /note="Predicted" /db_xref="GOA:A8XAE7" /db_xref="InterPro:IPR002557" /db_xref="InterPro:IPR006150" /db_xref="InterPro:IPR007026" /db_xref="UniProtKB/TrEMBL:A8XAE7" /protein_id="CAP29615.2" /translation="MLRNLILLTFLVSQGLCQTPVIGGTCKLGTADVQIGGKQTQFFL KCETTADSADGEGVWVVKSRAAAAAAPAPATLPTENTQPQQHPKARKPASPNICEQDN GARENEACAVSATCLQAHNDFPSSYLQCDQTTLRWVRKSCQENFLFNFEQQTCIVPKR MSSLSRKFPDNLITLPFSIFTAPPSSYSNSSNPCSKCPLGSACRDGKCIPLTTSNLCS DGSPPNNTCPKDPSQCPKGYICTAQKVCCPSTALQSSIGCSMVCTIDESCPKGMTCQN NCCEERKILRHPKVYRYATVEATNTIFEVDNDIFDSAAIESFPTRRPQKLEEVMAPGI TPTPTRTTEPPKLRCLSTDESNSSDGATTSCGGTNANCTIDEDCPISFKCSQGCCKLA KCPRSLVDVRFTCTSQYHCRSNEHCIFGGCCPKNIELAVIKSGPETMENKEKPGKNEN KTPLEPPKKIMIGDCEIDPRVRNCGIENVCPDMSECVDGVCCKQPPLARCGNGLMALT IPVTCDLSDDCPISSRCEYGKCCPLTSSEEASEASEDIIKEEVTSTATKVWKKVKKVE KGVSINKNNCLSSQICDLHTLCPPEFTCSLSGKCCKLNVRCPDGTVPETSCESANNHD TCPSSSHKCTLLNHEHFACCYSPGLVVEGSVSALVSSDSDCPMGSIEVDPRFGNSCRY SLQCPSPYFCNQKGRCCQLVNKPTDSCAPSPAAPTPTHAPWEPVTMDTAARPDPTLPQ SLVNSDSTTNQTASTSNSTKKHISSSNMKKHRKPKKKEQSPSDPLLPQNDFPIGPPGY GFPEHLSKLDEVLIRAQGDGVSCAGGFQSSLICSAGSECPAGLHCDTAINLCCPLLLP LTDPKNPKKRKTKRRKQKLEEFEVAESPVTKEPPARFSSYTCGCSNTFFTIAPAPSNK SQPPLNSNISISVSGGSSNCVGCQNAPQIITIPQSSCPGGGYSVGGCSSGYCATGYSC IQNQCCPSYNSAPRISVCLRFYKFKISDTCPSGGNAVGACMSGRCASGYTCSNNVCCP QTTTTNPFVCPDGTQAAGGCVNGQCGTGYTCSNGLCCAGTSTTVKCLDGSDAVGACIP SCTGDGCGGVQVSYYCGSGYTCTTGNICCPINSCPNGGEVLGPTINGLCPTGYTVQGN LCCSATCSDGSTGLAAVNGVCIAGYTLTNGVCCPSSVTCTDEISIGPCTGTGFNGGCP AGYACDSNNVNCCPVVTYDVESCQVGPAIDGLCPPGYVVVYIPNSPLITNGVNPGTCI DLQCTTGLCAAANQIGECDTTTDAGTCPTGYTCFTNAGICCQTTTFSRLRIGNARQMA QKPNYGRPLHSYMPPRLGGPSQSSSCCDGSLSSGPCMNGLCGIGLECQNGQCCSPSAN NKPVGFLQSKCPSGDTAVSGCFPNGSCGTGFECVSSLNLCCPPGQPQTFPSFPGNNVN NNNNNNNNGFNTFNNNNNRFGSSSMSPRPIGARCQLDGECVGHNDGLSMCHAGVCQCS PIAYTQGIACVRRNFPNERRPSDRRRRQVQQRPERQRVKPSKADELKRAMKRLCALYY YTSS" CDS join(1382992..1383190,1385008..1385096) /gene="Cbr-flp-25" /locus_tag="CBG_10109" /standard_name="CBG10109" /product="Protein CBR-FLP-25" /note="C. briggsae CBR-FLP-25 protein; contains similarity to Pfam domain PF01581 FMRFamide related peptide family contains similarity to Interpro domain IPR002544 (FMRFamide-related peptide-like)" /note="Predicted" /db_xref="GOA:A8XAE8" /db_xref="InterPro:IPR002544" /db_xref="UniProtKB/TrEMBL:A8XAE8" /protein_id="CAP29616.1" /translation="MSNSMIYLLLVVAVLTTVVDSKKDCSSIRGCDEDVSPVDLGLVL PPELYESTRLANLLARPSSQFKMKRDYDFVRFGRSAPMKKASYDYIRFGRK" CDS join(1386419..1386424,1386477..1386935) /gene="CBG25914" /locus_tag="CBG_25914" /standard_name="CBG25914" /product="Protein CBG25914" /note="Predicted" /db_xref="GOA:B6IHM4" /db_xref="UniProtKB/TrEMBL:B6IHM4" /protein_id="CAR99425.1" /translation="MLIGLFVNLVVRPFRRLLFGSDPPPTTTTAPITTLPPPGTTLPP VTTGPPPTTTTEAGYTIMILFFLGVVALLIFSSAGGVFFYMQNKKKQQIPQGAVVEDT ESGTTTGETSGTTGTTGTTARSTMRSTTRSTTKSTTGTKMKGKKKRTSSTMH" CDS complement(join(1387522..1387938,1387988..1388002)) /gene="CBG25915" /locus_tag="CBG_25915" /standard_name="CBG25915" /product="Protein CBG25915" /note="Predicted" /db_xref="GOA:B6IHM5" /db_xref="UniProtKB/TrEMBL:B6IHM5" /protein_id="CAR99426.1" /translation="MGFWFFRWFDRVFVTPFGEIIYSPSPAPTSAPVTPPPSGKTPAP PPTTTEKSFIVAMLVCFIIVLLLIISSAGGVFFYMRNKKKKVAPGAPADSSSGTVEVE SGSVVGLTSKSTTKSTTRSVNTGVKKKKSKVKKVSTVVAVD" CDS complement(join(1388468..1388998,1389047..1389049)) /gene="CBG25916" /locus_tag="CBG_25916" /standard_name="CBG25916" /product="Protein CBG25916" /note="Predicted" /db_xref="GOA:B6IHM6" /db_xref="UniProtKB/TrEMBL:B6IHM6" /protein_id="CAR99427.1" /translation="MRAAVSVVTGAVENVVVTGLNEVGSIFSGPSPPPTTTTTTTTTT TTTTTPAPGANPANSPIAPNNPANPASPLNTPKSAAIDGTTELAGTDIIIFLVVLAVF LGISFIGIFFIIKSLRKKPDTAEGAASPIIVTVESGSVGASETSGTTTGETKAKKKKK KTKGKKTKSGESGTTTS" CDS complement(join(1389580..1389936,1389950..1390015, 1390054..1390254,1390500..1390583,1390631..1390768, 1390851..1390958,1391007..1391196,1391243..1391496, 1391546..1391722,1392261..1392445,1392489..1392656, 1392702..1393020,1393064..1393292,1393681..1394059, 1394106..1394717,1394758..1394869,1394916..1395035, 1395079..1395313,1395357..1395455,1395502..1395618, 1395905..1396035,1396083..1396211)) /gene="CBG10112" /locus_tag="CBG_10112" /standard_name="CBG10112" /product="Protein CBG10112" /note="contains similarity to Pfam domains PF12698 (ABC-2 family transporter protein) (2), PF00005 (ABC transporter) contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR017871 (ABC transporter, conserved site), IPR003593 (ATPase, AAA+ type, core)" /note="Predicted" /db_xref="GOA:A8XAE9" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="InterPro:IPR026082" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8XAE9" /protein_id="CAP29617.2" /translation="MLVKLLALLKKDAILATRSKVWTMFELLLPVFILFVVNGMMETI SDQMQKGTKEIDQLGDYSATSVIAFIPPQICDMKKVDPKILFRNGSDEVWGEYNMGRI DSVNPKYKFTEDDALKKMADCEQATMIVHNSGKDFTVFVPIVGEIPVADFKDAMSMKG DKYFFSSVFIQAILEVDKPKKDKHRLSDNIEVNKIKARDVKIPEVALPYFHVIIGLSM MVTIVNVVRTVVTEKSTVKPYLSAIGLPGWLFYLEHFIATFLKSIITCIGSLKYFMGL KYTSLALLMMGVILYIIGAIAFAILLSAIFTNAKRGIEASLVAWIIIMFFPMTQDEDD LSLLYSININYAYYYFLKKVQINSLANFKLSFGSLFDTTYIEGTAPGYYFLMMIFDVV WMIAAALLYDRYGGKLSGIKDLFSVCLLLLGTLLISWLQGGKGRKKAGSDEDVILEGC IENVKMRSKAVSDVELNNVVKVYPTGERAVNGLSFRAIRGQVSILLGQNGCGKSTTFS MISGVALPTSGSIEVAGVDAVRQKDKARKFIGFCPQYNPLYDRLTVLEHLELVNALKE GPPHLFLGEAKQLLQAIRLADKAGTHSANLSGGMKRKLCVCMAMIGGSKVVLLDEPTV GMDPGARKDVQMMLEKIKVNRTILLTTHYMDEAERLGDWVFVMSYGKMAASGSLNYLK KKFGSGYVLTVVLDVKSDRKHSTRLVKEICHHIIPDSRLKDQRGQMIEMTLPEDAKNK VVPLLKVLESIIEKKYKSGPIKKLPSALKEKIKKLKITTLGLSLSSLETVFIRICDEC DLVIAKEKNLEDKREIAEKNYEMLTEMKKNKRVTGTALQSSQFTCLLRKRYYYTLRNI YQLFFQIIIPILIVIFGLHSMKVEETAKPKKLEKLDLNIFPKSVVVMMKGSGKTDHYD KIKSQIEGFKHLTVKEHDAAKDHEELVQEYYKEKLGFIVMVSENVARIFYNHAVTRAS PVLTTLAANWYSEHGPYNVELKWLTSSKEEATNKFMMFLFVPFFLMLGFALVTAPFVQ FSIEERICKFSHQQHLTGMSKMIFWSANILWDSLIFIIFCVETILIFLAFGRYQNCLP LIILVYSVLLLAILPITYVASLVFESPAKASTLLVLYQMVLGIIIVLTMMILSFIKSK VSNVITPIFYILCPPSAFLFGFFKTTIEEELKKDPEGMLSQMLATYFFLGLASFVSIV TVYAMQNRATKVAIFDMRHSAKKPIPKKPVRLAPCKAVMLEEQLVHRPQVKNCTVVVK DLVRVFGTFRAVNGVCLTVRNNECFGLLGTNGAGKTTTFDILTGLRFPSGGSAVIDGK DVVKHNVNYYVGYCPQFDSILPDLKCIEALEKENFSRIAILRKGEMIALGTSQDLKSQ YGNTYTMTLMVKKISERERVIKGVQKKMKEAVLKTALTNITTSLVWELPKRPGDKWSR KYEKVEKLAKKLHVKDFMLTQSSLEDTFITLTD" CDS complement(join(1397790..1398278,1398329..1398343)) /gene="CBG10113" /locus_tag="CBG_10113" /standard_name="CBG10113" /product="Protein CBG10113" /note="contains similarity to Interpro domain IPR018201 (Beta-ketoacyl synthase, active site)" /note="Predicted" /db_xref="GOA:A8XAF0" /db_xref="UniProtKB/TrEMBL:A8XAF0" /protein_id="CAP29618.1" /translation="MGWGFFGDAVRWVASVPTKIVNTIMPPPPPPPPPPPPPPTTAPP PGTTPEPPAPTTLSTTTEARMAMGLVIVGVFLLLLVCCSAAGIFFYMKKKKAKQQELD AAAAAVNTPMSPEQLESGTTGTTGTTGTTGTSCVSTATGTTAAGKKKKKKKSKNKKTT TTASTMQ" CDS join(1405153..1405220,1405269..1405435,1405843..1405994, 1406274..1406676,1406727..1406851,1406904..1407758, 1407809..1408063,1408107..1408349,1408418..1409278, 1409348..1410620,1410680..1411461,1411689..1411784) /gene="Cbr-emb-9" /locus_tag="CBG_10116" /standard_name="CBG10116" /product="Protein CBR-EMB-9" /note="C. briggsae CBR-EMB-9 protein; contains similarity to Pfam domains PF01413 (C-terminal tandem repeated domain in type 4 procollagen) (2), PF01391 (Collagen triple helix repeat (20 copies)) (21)contains similarity to Interpro domains IPR001442 (Collagen IV, non-collagenous), IPR008160 (Collagen triple helix repeat)" /note="Predicted" /db_xref="GOA:A8XAF1" /db_xref="InterPro:IPR001442" /db_xref="InterPro:IPR008160" /db_xref="InterPro:IPR016187" /db_xref="InterPro:IPR036954" /db_xref="UniProtKB/TrEMBL:A8XAF1" /protein_id="CAP29619.1" /translation="MSRLSLLGLTAAVVLLSSFYTDRIHVDAAAACKGCAPPCVCPGT KGERGNPGFGGEPGHPGAPGQDGPEGAPGASGMFGAEGDFGDVGAKGARGDRGLPGSP GHPGLQGLDGLPGMKGEEGIPGCNGTDGFPGIPGLAGPPGQPGPNGNQGRPGIPGPPG EGGVNSQGRKGVKGESGRPGVPGLPGNSGYPGLKGAKGDPGPYGLPGFPGVGGLKGRM GMRTSGVKGEKGLPGPPGPPGPPGSYPWASKPIEMEVLQGPVGPGGVKGEKGRDGPVG PPGMLGLDGPPGYPGLKGQKGDPGDAGQRGKRGKDGVSGSYGEKGTQGEQGVPGTPGY PGTKGEAGEPGYPGRPGFEGDCGPEGQLGEGTGEAGPRGAQGFDGVQGAKGLPGHNGL PGPVGPRGPVGAPGAPGMPGIDGMPGYTEKGDRGEDGYPGFAGEPGLPGESGDCGYPG EDGLPGYDIQGPPGLDGQSGRDGFPGIPGDIGDPGYSGEKGFPGTGVNKVGPAGMTGL PGEPGMPGRIGMDGYPGPPGNNGERGEDCGYCPDGLPGNPGDVGYPGMNGYPGPPGPN GDHGDCGMPGLPGKPGAPGADGINGSPGLPGIPGYPGMKGEDGEIIGPMENPAGIPGL KGDRGLPGLPGRQGNDGLPGLPGSPGQDGFPGLRGEPGLSGIDGKRGRQGSLGIPGLQ GPQGDSYPGQPGTPGFKGEAGANGLPGLPGAQGPRGIPAPLRIVNQVAGQPGVDGMPG LPGDRGADGLPGLPGPVGPDGYPGTPGERGMDGLPGFPGLHGEPGMRGQQGEVGFNGV DGDCGEPGLDGYPGQPGAPGAPGETGYGFPGQVGYPGPNGEPGAAGLPGPDGYPGRDG LPGTPGYPGEVGMNGQDGAPGMPGARGESGLVGIDGKKGRDGQPGPRGQDGVPGYRGE AGAPGQNGMDGYPGAPGDNGYPGAPGQDGYPGPNGIPGEDGLVGFPGLRGEHGDNGLP GIEGECGEEGARGTDGLPGYPGEQGQDGHPGLPGADGLPGLSGEPGDSGMPGYRGQPG EPGNLAYPGAPGDLGYPGPDGPPGLAGPDGLPGLNGERGEVGDSYPGNPGLSGQPGDA GYDGLDGVPGPPGYPGITGMPGLKGESGLPGLPGRQGQDGLPGAPGLEGECGEQGFPG APGQPGYPGQQGREGEKGYPGMPGENGLSGLRGQDGLPGLKGENGLDGQPGYPGAPGQ LGTPGDVGYPGAPGENGDNGLQGRDGQPGLRGEPGQPGMPGLQGRDGQTGPIGPPGDD GYPGAPGQDTYGQPGQAGQDGYPGLDGLPGSPGLNGEPGTPGQYGMPGLPGMPGEPGQ TGYPGERGLVGIDGKRGHDGLPGAPGLDGVIGVPGVEGDCGEDGLPGLPGAPGSNGYP GERGLPGVPGQQGRSGDNGYPGQPGQPGLKGPRGDDGYPGRDGLDGMPGRGGPQGLPG PLAMEIRNPPGLSGDNGYPGEKGYPGLPGDNGLPGPPGKAGYPGASGQDGYPGPPGLP GTPGGLGDQGFQGERGRGGHPGLPGTPGYPGSPGGWAPSRGFTFAKHSQTTAVPQCPP GTSQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSRNDYS FWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSGMW TGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGRGTCNYYATNHGFWLSIV DQDKQFRKPMSQTLKAGGLKDRVSRCQVCLKNR" CDS join(1414685..1414906,1414918..1415175,1415220..1415471) /gene="CBG10117" /locus_tag="CBG_10117" /standard_name="CBG10117" /product="Protein CBG10117" /note="contains similarity to Pfam domain PF03184 DDE superfamily endonuclease contains similarity to Interpro domain IPR004875 (DDE superfamily endonuclease, CENP-B-like)" /note="Predicted" /db_xref="GOA:A8XAF2" /db_xref="InterPro:IPR004875" /db_xref="InterPro:IPR007350" /db_xref="InterPro:IPR035896" /db_xref="UniProtKB/TrEMBL:A8XAF2" /protein_id="CAP29620.2" /translation="MSKFRRILTYILDLGVNPKRQPLDEEDLKLAAYLIDLGESIDKG DFDIEMEQHLSNFEDDLQDLSKFQFSESLHDSSMPKDALLIVDSWNSWKDTAAIDSVT PSSHKLKLLTIPAGCTGRIQPCAVGIFGSFKKVVKTLTNYAQLTNSNYKFQTRDETLK LLSLVWRQLCSPKLEKWARYAWVAAGYDVPRPASFETPAQLLFPRGVAGDCTMHGCSS TSFVKCLYCEKLFCFEHFVIDHHNC" CDS join(1418026..1418114,1418165..1418390,1418433..1418646, 1418700..1419049) /gene="Cbr-elo-4" /locus_tag="CBG_10118" /standard_name="CBG10118" /product="Protein CBR-ELO-4" /note="C. briggsae CBR-ELO-4 protein; contains similarity to Pfam domain PF01151 GNS1/SUR4 family contains similarity to Interpro domain IPR002076 (GNS1/SUR4 membrane protein)" /note="Predicted" /db_xref="GOA:A8XAF3" /db_xref="InterPro:IPR002076" /db_xref="InterPro:IPR030457" /db_xref="UniProtKB/TrEMBL:A8XAF3" /protein_id="CAP29621.1" /translation="MELAEFWNELNTFTIYGPNHTDMTTKYKYPYHFPGEQVEDPQYW TILFQKYWYHSITISVLYFALIKVIQKFMENRKPFTLKYPLILWNGALAAFSIIATLR FSIDPLRSLYAEGLYKTLCYSCNPTDVAAFWSFAFALSKIVELGDTMFIILRKKPLIF LHYYHHAAVLIYTVHSGAEHTAAGRFYILMNYFAHSLMYTYYTVSAMGYRMPKWVSMT VTTVQTTQMLAGVGITWMVYKVKADYKLPCQQSMANLYLAFVIYVTFAILFIQFFVKA YIVKSAKKSAKSVKKD" CDS complement(join(1419189..1419356,1419409..1419568, 1419691..1419751,1419799..1419898)) /gene="CBG10119" /locus_tag="CBG_10119" /standard_name="CBG10119" /product="Protein CBG10119" /note="contains similarity to Interpro domain IPR014806 (Ubiquitin-fold modifier-conjugating enzyme 1)" /note="Predicted" /db_xref="GOA:A8XAF4" /db_xref="InterPro:IPR014806" /db_xref="InterPro:IPR016135" /db_xref="UniProtKB/Swiss-Prot:A8XAF4" /protein_id="CAP29622.1" /translation="MDETTKSSLKAIPLCKTKAGPRDGDLWMERLKAKYEAIIAAVQN NKTSDRDWFKLEANERGTKWFGKCWYFHNMVKYEFDVEFDIPITYPVTAPEIALPELD GKTAKMYRGGKICLSEHFKPLWARNTPKFGIAHAFALGLGPWMAVEIPDLIEKGIIQP KA" CDS complement(join(1420557..1420831,1420883..1421027)) /gene="Cbr-ttr-5" /locus_tag="CBG_10120" /standard_name="CBG10120" /product="Protein CBR-TTR-5" /note="C. briggsae CBR-TTR-5 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)" /note="Predicted" /db_xref="GOA:A8XAF5" /db_xref="InterPro:IPR001534" /db_xref="InterPro:IPR038479" /db_xref="UniProtKB/TrEMBL:A8XAF5" /protein_id="CAP29623.1" /translation="MKLLILLCLVAATTALIGNTQSAGVRGKLICNGKPAVGVLVKLY DDDRGIDADDLMASGKTNGNGDFEIAGHEDEVTPIDPKLNIYHDCNDGIKPCQRKFTI KIPDSYISKGKVARKIYDAGVVQLAGSFPGEGRDCLH" CDS join(1422113..1422273,1422323..1422899,1423655..1423785, 1423833..1423953,1424001..1424302,1424356..1424518, 1428658..1428780,1428860..1429435,1430191..1430321, 1430369..1430489,1430537..1430838,1430892..1431123) /gene="CBG10121" /locus_tag="CBG_10121" /standard_name="CBG10121" /product="Protein CBG10121" /note="Predicted" /db_xref="GOA:E3CU12" /db_xref="UniProtKB/TrEMBL:E3CU12" /protein_id="CBX33067.1" /translation="MSSSSRNFDLEYDEYKERRNAAGMGIRASSRNGRFKPVDQEKEK VKKEIGDYGLPKNEYQMQGYNERSSDLGVDPLASVRTLRNNLRVMSLEHRDKDEPVKA HLCQSACDDLSKAEKQLVDLSHKRSDAVVRGDTRQVESIAKDMERVKSDAIRNAYSDL MMEDGAMKAFGVNSKWTTDKNPMPTDDWKPMTPMKPRKRAETPKRSESRQSVRRGNND NGDGRMASRASSRSAERRVIPSEPESRKPKATRKNQRLSTIGHVPEAIPVDSPLAGGS TVQDDPYKMPTYVGRCPHCQLTEAGLGKPGGMEKHYARYCKVMTSCKYCMKVTMVSQL TDHLIYRCEFLQDTMEACNDCGLAIEKEDQKRGASHPMCRGRRPPPGAQWCPLCTIAV EDNEENWREHLLSNCYNNPRRDGPEKDPWEMKQQQDDILKGAAEKKRQEKEEEEQGKK EAELKRQQQQVVVNNTGYPGRMIDADKLVVALQEISSRNFDLEYDEYKERRNAAGMGI RASSRNGRFKPVDQEKEKPKNEYQMQGYNERSSDLGVDPLASVRTLRNNLRVMSLEHR DKDEPVKAHLCQSACDDLSKAEKQLVDLSHKRSDAVVRGDTRQVESIAKDMERVKSDA IRNAYSDLMMEDGAMKAFGVNSKWTTDKNPMPTDDWKPMTPMKPRKRAETPKRSESRQ SVRRGNNDNGDGRMASRASSRSAERRVIPSEPESRKPKATRKNQRLSTIGHVPEAIPV DSPLAGGSTVQDDPYKMPTYVGRCPHCQLTEAGLGKPGGMEKHYARYCKVMTSCKYCM KVTMVSQLTDHLIYRCEFLQDTMEACNDCGLAIEKEDQKRGASHPMCRGRRPPPGAQW CPLCTIAVEDNEENWREHLLSNCYNNPRRDGPEKDPWEMKQQQDDILKGAAEKKRQEK EEEEQGKKEAELKRQQQQVVVNNTGYPGRMIDADKLVVALQEIQERKKAEKKKKLKDI EKENAAN" CDS complement(join(1425115..1425337,1425389..1425564, 1425617..1425830,1426290..1426306)) /gene="CBG10122" /locus_tag="CBG_10122" /standard_name="CBG10122" /product="Protein CBG10122" /note="contains similarity to Pfam domain PF01764 Lipase (class 3) contains similarity to Interpro domain IPR002921 (Lipase, class 3)" /note="Predicted" /db_xref="GOA:G2J6N6" /db_xref="InterPro:IPR002921" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:G2J6N6" /protein_id="CAP29625.2" /translation="MEPICEHSRIFFLKITKLRIPGFVFQVTGYSMGASLALITSAYI AQTGMSNPQNMKVVLLGCPRCTDYDFAMWHSINFPYSYHIIHAHDYAPRVPFFDNIDN ISLYHPRTEIWYNNEMREGDSFVICEQTDQPFCSSKIQNLSTPDHMHYFNIDIVRWSL SGCPKNREDFKPIFGTHQRIHIEDYEFENSSPVSYLLASVVIVVVVNYL" assembly_gap 1427648..1428291 /estimated_length=644 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(1431651..1431873,1431925..1432100, 1432153..1432366,1432826..1432842)) /gene="CBG10123" /locus_tag="CBG_10123" /standard_name="CBG10123" /product="Protein CBG10123" /note="contains similarity to Pfam domain PF01764 Lipase (class 3) contains similarity to Interpro domain IPR002921 (Lipase, class 3)" /note="Predicted" /db_xref="GOA:G2J6N6" /db_xref="InterPro:IPR002921" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:G2J6N6" /protein_id="CAP29626.2" /translation="MEPICEHSRIFFLKITKLRIPGFVFQVTGYSMGASLALITSAYI AQTGMSNPQNMKVVLLGCPRCTDYDFAMWHSINFPYSYHIIHAHDYAPRVPFFDNIDN ISLYHPRTEIWYNNEMREGDSFVICEQTDQPFCSSKIQNLSTPDHMHYFNIDIVRWSL SGCPKNREDFKPIFGTHQRIHIEDYEFENSSPVSYLLASVVIVVVVNYL" CDS join(1432744..1432793,1433726..1433800,1433850..1433945, 1434261..>1434367) /gene="CBG10124" /locus_tag="CBG_10124" /standard_name="CBG10124" /product="Protein CBG10124" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XAF9" /protein_id="CAP29627.1" /translation="MPAIWVGGCWSVVVGVEPTDGFQRLTFLPKAENQKFSADSYRSG ARNSVTTKPFTVSTGHTTSERNSTDRKTKRKKTTKSNFSIGLSSNGYREGEMRRKYRV QGARRQT" CDS complement(join(1436180..1436366,1436410..1436527, 1436773..1436821)) /gene="CBG10125" /locus_tag="CBG_10125" /standard_name="CBG10125" /product="Protein CBG10125" /note="Predicted" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8XAG0" /protein_id="CAP29628.1" /translation="MKVYKHREANCSFLFSDVTCAGFTGYDTTRKLIVLSIRGSHGVH QYYDLWKVGNENGTVPFLGVGRVTKVFHDNFESLWYGGLGEDTQVDREERYMGSRGAV YARNTKHIGAHRASI" CDS complement(join(1438102..1438311,1438358..1438904, 1438955..1439045,1439088..1439204,1439251..1439640, 1439687..1440089)) /gene="Cbr-cpb-1" /locus_tag="CBG_10126" /standard_name="CBG10126" /product="Protein CBR-CPB-1" /note="C. briggsae CBR-CPB-1 protein; contains similarity to Interpro domain IPR000504 (RNA recognition motif domain)" /note="Confirmed by transcript evidence" /db_xref="GOA:Q6E3D0" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR032296" /db_xref="InterPro:IPR034819" /db_xref="InterPro:IPR035979" /db_xref="InterPro:IPR038446" /db_xref="UniProtKB/Swiss-Prot:Q6E3D0" /protein_id="CAP29629.3" /translation="MQHQLKACGDVKTSSRAQQNHRRSTAASAKRSVGAGNSFLATDV TNLEMNSNFMTRKLKKNGNGVIGSPLSNGYFGAQLTANSFNYTPQANPYSNLDFQMAM GSGDVPSLMGMPVHKPSMMLQSDPSMDLTQFTEELQAIQNMPFQPISSSQAALQAFLA ANEAASIGSYGFSKSQMLPSNSMRVSGARKNRIVEVKNQNDRLFLVLSDPQASVSTRP TLVPLTRPLQSVAQSCLDLTKKQPFSTEPLYSRKVFIGGLPIDVPDEEVYVTFGSFGK VLIDWPRRPEHNGRASDMYESEMGRRNLRSVSGYVFLVFTHEDSVQDLVNACEFYDGK YYLQLSSPTMQDKAVQVRPWRLSDIDYFSEEKVTVDPRRTVFIGGVPRPTRACDLARS LQDYYGKVSYVGIDIDPELKYPKGAARVTFATAQSFVRAISGRFVQVTHAETNKRVEI KPYVMEDQYCDECEGDLCKHNYAPYYCGDSSCLQYYCEGCWDRMHYEMGQSRADHRPM VRTGDQTRILPRPPHHPAAHHSHQRPQYLLHQDQLDNHHSSRGNSSVISRIVNRNSAT MLDHVPGKPFSAISASYGY" CDS complement(join(1440838..1441024,1441882..1441953, 1442123..1442238,1442745..1442805,1443246..1443355, 1443415..1443682,1444043..1444160,1444208..1444272, 1444319..1444383)) /gene="CBG10127" /locus_tag="CBG_10127" /standard_name="CBG10127" /product="Protein CBG10127" /note="contains similarity to Pfam domain PF01764 Lipase (class 3) contains similarity to Interpro domain IPR002921 (Lipase, class 3)" /note="Predicted" /db_xref="GOA:A8XAG2" /db_xref="InterPro:IPR002921" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8XAG2" /protein_id="CAP29630.2" /translation="MRTQQLTLASASHGDQIQKCFDNQIPTMKFFNIRIVNCSSDASD VTCTGYTAYDISQKVIVISFKGVDGDDQLQQLYDGYDNLGLQSYFGVNGKIFKIIYNW FMLLWNGGIEKDLRSLKYKYPGCDLWINGHSLGGELAWTAASLVATSGLYKPENIKVV TMATPRMFDYDFFPYSYHIIHRNDTIPRSNKIDPHTNSTVMFHPRTQVCWCVESSQCN TTFSSCQTQITVQLNCPALPKYAYDDSFMRTQQLTFASASHGDQIQKFFGNQIPTMKL FKLRAVTCSEGNASMWYNNYMNETDQYEICEQADGNYCSDTVQEGLSMWDHIYYFNVN MPAWGRDGCPKDRSSYAQQ" CDS complement(join(1445358..1445654,1445701..1445989, 1446039..1446156,1446202..1446266,1447465..1447586, 1447636..1447696,1447743..1447879)) /gene="CBG10128" /locus_tag="CBG_10128" /standard_name="CBG10128" /product="Protein CBG10128" /note="contains similarity to Pfam domain PF01764 Lipase (class 3) contains similarity to Interpro domain IPR002921 (Lipase, class 3)" /note="Predicted" /db_xref="GOA:A8XAG3" /db_xref="InterPro:IPR002921" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8XAG3" /protein_id="CAP29631.1" /translation="MYSIIKSLLIILSIMVLILLLLGLLPNFFYFVHAQNCSNCVESG NIWCVESAQCNDTFPSCQTQISLQLNCPTLPNTKYAYDDSFMRTQQLVLASASHCDNP QRCFDSQIPTIKVLSVRTVNCSANAEEVTCMGYTAYDVSRKIIIMSFRGSKGPYQNQQ MADGMASGGLLNYFGHSGKIFKIGYDYFQLLWNGGMQQDLRSLKYKYPGFQLWINGHS LGGMLSWVASSYLVTSGLYKPEDIKVVAFGSPRLGDYDFSLWYTQTFPYSYHIIHRLD LIPRVPVIDPHTNTTVLFHPRTEVWYNNYMKIDDPYQICEEADGNYCSAAVTEGLTMT DHGYYFNVNMPAWGRDGCPQNISEYAQL" CDS join(1449599..1449897,1449948..1450414,1450489..1450580) /gene="CBG10130" /locus_tag="CBG_10130" /standard_name="CBG10130" /product="Protein CBG10130" /note="Predicted" /db_xref="InterPro:IPR001810" /db_xref="UniProtKB/TrEMBL:A8XAG4" /protein_id="CAP29632.1" /translation="MIISKYPYLVQDEILCNMECSDIFLLSFASKNMKKSIYTSKRNR FKRISSITYDCLDTDQPYVHINYDRRWDTIMRIMKHEEDGYFNFQLNVCGKSIDFGSS DQCNYYIASFYPCDKESVIKSIYNYFLDFFGNSVEYYWQSENMKYLLRPFTGRLPFFV PFIPQLQNLSLCVSICIKLSWIFADMKTLENFLTHSPVFKSVFMKVRETTEPFNPESK LYQAKYVVIDQDELTAPDILRYLKGDRQHHQRTLCPKYTFGIMNTKVQILPQVTHVWS ENQIIVWHL" CDS complement(join(1451130..1451319,1451363..1451469, 1451517..1451808,1451859..1452041,1452173..1452288, 1452329..1452389,1452434..1452519)) /gene="CBG10131" /locus_tag="CBG_10131" /standard_name="CBG10131" /product="Protein CBG10131" /note="contains similarity to Pfam domain PF01764 Lipase (class 3) contains similarity to Interpro domain IPR002921 (Lipase, class 3)" /note="Predicted" /db_xref="GOA:A8XAG5" /db_xref="InterPro:IPR002921" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8XAG5" /protein_id="CAP29633.1" /translation="MHINLLLLVSCFSFVFSDSCSNCVNSGKLWCLQNSQCGDTTLAC NTSITVPLNCPSPPQYGYDDEFMRSEIMVLTTAAQNENPQLCFNNQIPTMKLYKVTTA NCSTVYNDVTCVGYTAYDTKRKVISISFKGAHGQDQIKEMTDNCVKYGLESYYTVTNG MIFKCIQDSFMLIWNGGMQADLRYLKYKYPSFELWVNGHSLGSSLAWAASAWIVNIGL YKPDDMKVVVMGSMRISDYNFAAWHTQTFSYNFHILHRSDPVAHTPTFVASTNTTLFY PKTEVWYNNYMNQGDPYQVCQEADGPFCSGSVDPKATQYIDHLYYFNIDLPGWGHAGC PMNISAYAQP" CDS complement(join(1453166..1453388,1453432..1453544, 1453584..1453875,1453924..1453955,1454032..1454107, 1454213..1454328,1454378..1454438,1454489..1454577)) /gene="CBG10132" /locus_tag="CBG_10132" /standard_name="CBG10132" /product="Protein CBG10132" /note="contains similarity to Pfam domain PF01764 Lipase (class 3) contains similarity to Interpro domain IPR002921 (Lipase, class 3)" /note="Predicted" /db_xref="GOA:A8XAG6" /db_xref="InterPro:IPR002921" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8XAG6" /protein_id="CAP29634.2" /translation="MHMLLLLLLVPCLTFISADDCTDCVNSGRLWCLQTSQCGGTTLA CNTSITVPLNCPSLPRFAYNDEFMRTEIMVLTTAAQNENPQLCFDNQMPTMKLYKVTT VNCSTNYTDVTCINQLLNGAMEYGLESYYTVTNGKIFKIIQDSFMLLWNGGMQTDLRY LKYKYPNFKLWVNGHSLGSALAWAASAWVVNIGLYKPEDMKVVVMGAARISDYNFAVW HTQTFPYNFHILHRSDPVAHTPTFLPSSVPFTTLFYPKTEVWYNNYMNQGDPYQVCQE ADGPFCSGSVDPKATQYMDHLYYFNIELPGAATLQPLLKVPSNHATTLRYTARRAHS" CDS join(1464891..1464947,1466047..1466207,1466418..1466525, 1467072..1467190,1467237..1467333,1467851..1468168, 1468220..1468315,1468838..1468952) /gene="Cbr-srx-45" /locus_tag="CBG_10133" /standard_name="CBG10133" /product="Protein CBR-SRX-45" /note="C. briggsae CBR-SRX-45 protein; contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10328 (Serpentine type 7TM GPCR chemoreceptor Srx) contains similarity to Interpro domains IPR019430 (7TM GPCR, serpentine receptor class x (Srx)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8XAG7" /db_xref="InterPro:IPR017452" /db_xref="InterPro:IPR019430" /db_xref="UniProtKB/TrEMBL:A8XAG7" /protein_id="CAP29635.1" /translation="MEDVEVMQIDRIAALLIFSTSFVGFVCNTFIAVYIRRLSLLRNS FGRLLQLQAAGDAVFVLVWAFYFAPVLFFDIKPLQTLGVASRFAQLCLICYDISIYTH LVISLNRFISLYFPTSYQNIFTERFTTVLICSIILISFGFSWFLVIVDCKMGFSIPRW MLDYVSPPCEMVNVYYAEFFRGLIVISMFAITNTFTFCRMHMHNRKKQSESTFETTQQ KKRRAVETAFVQQVTLQGLLYVLELVTYFYISNWFKVPTDAKSLAESSNRWPNFLLTT YAWILVHALDGVITLIFNKQFRSVLRHPFRSQATLNASKTPSRRNRFVTNRTDSNRKK SSILACTFISNSNTGYGSSVHV" CDS complement(join(1469466..1469603,1469796..1469960, 1470009..1470161,1470217..1470313,1470364..1470641, 1470956..1471118,1471774..1471912,1474010..1474124)) /gene="CBG10134" /locus_tag="CBG_10134" /standard_name="CBG10134" /product="Protein CBG10134" /note="Predicted" /db_xref="GOA:A8XAG8" /db_xref="UniProtKB/TrEMBL:A8XAG8" /protein_id="CAP29636.1" /translation="MNDEEAGGFEEDGGRFRRFRRRLKKDWSQLWNDLSDPKQMRFPW PINTPLEVYEQVGAERFDPSSHRYQMPFFWKTLAVPATPSWALLVCIIESSFALICFL AVMLHYAIFLPWCDVYSKPLIVFYLTALQYAVFYSFKVIFVISIVERNARLLRLQLFF QYATCVFLLLDAAFALAADFGGYNEELIYCDKNPLLIRFVAIISLIFLFVQMFLRIIT VQVYNFMWDVRKFRKSLNNSKWRYRKRVHFTYCSIMQEDFKAERLNNKTRSVESRFRD DQEEILKQIQRKQNVTNISIAPDEPFDESQLPQNTRSISTLSTTPSNPTTIASPLGKR KHNRSVSSTSKKMKDNEGKKVKVSKRKPGGIKVQLEVDYETARLLFSPRKNGRIPNVH VEEIELDLDEDDALLSEEHEPIV" CDS join(1478326..1478337,1478414..1478674,1479232..1479336) /gene="CBG10135" /locus_tag="CBG_10135" /standard_name="CBG10135" /product="Protein CBG10135" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XAG9" /protein_id="CAP29637.1" /translation="MSIKILFEQIEQSTKHVLCDCELQSVTIRRDEEHGLKEEENSKK KDKKEPILYRNECCGTDVETEDKCVGPSILKVNVATKYEFQKLNATQIHRAINDPKLG EFLVRVYPLLKEELDNSDLFNKL" CDS complement(join(1479918..1480088,1480739..1481785, 1481839..1481944,1481991..1482189,1482236..1482494, 1483272..1483497,1486017..1486075)) /gene="Cbr-fozi-1" /locus_tag="CBG_10136" /standard_name="CBG10136" /product="Protein CBR-FOZI-1" /note="C. briggsae CBR-FOZI-1 protein; contains similarity to Pfam domain PF02181 Formin Homology 2 Domain contains similarity to Interpro domains IPR015425 (Actin-binding FH2), IPR003104 (Actin-binding FH2/DRF autoregulatory)" /note="Predicted" /db_xref="InterPro:IPR015425" /db_xref="InterPro:IPR042201" /db_xref="UniProtKB/TrEMBL:A8XAH0" /protein_id="CAP29638.2" /translation="MVVIPSVSPCFAVRRAYGAAHDAMMLASSAPTAPSLLPPNSQPS AATSARGTTDDCSSSTSPTNTSASDGSSMDILSNLMSTVTNQVPGNSLVKQSYPCTFQ FCVICQKDVHSSKLPCHIRQCHVAKPMFQCPACDFTSTYSKNNVKSHMVSLHGMAGDP ISYMDQYAGQVEEFMKLCFPNVRGRGRPMQGRSSPPKSPTSPPHGGRRGSVASTIPSR RHTVSQSELLATIQAQQQQQAAFQSLRNFRFNPLQSIFPTVLAANNNNNSVLSANKHA VNNFMIKPEEKDVPTMPIEDIKNIITSTTSPTPSVVSFGGGIIQPIKPGENAQPKYLS TGFDWPVLNDLQMKGTIFNDCRINMELYAENIARKIEANEVYSTFIMSDDMRVTVEEV RSRVSVQLFEVMFAIHRMDVKCLDLNLVNLLIEISPTNSDAQLLRKMESSKMDPNEEF LLGLTKIDHIEEKLETMKHVHMFPEQMETLKDTIIKFEVAVKVLCESRALRNVMQLVL AILNIGFFDDRQCLSINGFPVSHIMQIIQSNTPSGQSVQSILVTILKDEINLDLDELF GIIDVLEKIEDEDYNGIVEELTVLDDKTVRAEKEMEHSGSNISLSEFVENSKNLSKAT WDSLNSLKTNIQKLTAYLGNPLPRHQNLNPHEPFNSVLHLLRSLKTAIELNETSEEQH INVMSP" CDS join(1513967..1514266,1515158..1515184) /gene="CBG10141" /locus_tag="CBG_10141" /standard_name="CBG10141" /product="Protein CBG10141" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XAH1" /protein_id="CAP29639.1" /translation="MYIRTFSLGGLLYKHALSLSLSLSLSLSLSLSLSLSLSLSLSLS LSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLTHFLPSSYYQP FLIENF" CDS join(1515661..1515684,1517002..1517173,1517215..1517327, 1517415..1517633,1521197..1521416,1521822..1522046, 1522107..1522213,1523225..1523383,1523645..1523747, 1523943..1524089,1524137..1524346,1524644..1524766, 1524816..1524917,1525845..1525900,1525951..1526250, 1526300..1526409,1526467..1526637,1527149..1527249, 1527305..1527528) /gene="CBG10142" /locus_tag="CBG_10142" /standard_name="CBG10142" /product="Protein CBG10142" /note="contains similarity to Pfam domain PF01302 CAP-Gly domain contains similarity to Interpro domain IPR000938 (CAP Gly-rich domain)" /note="Predicted" /db_xref="GOA:A8XAH2" /db_xref="InterPro:IPR000938" /db_xref="InterPro:IPR036859" /db_xref="UniProtKB/TrEMBL:A8XAH2" /protein_id="CAP29640.2" /translation="MNKSHLGTADNPQEVVTAHDIGRLVDVVNVGKGFLRYVGPIHGK EGLFCGIELLEPNGKHDGSFQGVSYFIATPQHGIFAPIFRVTLDADERPKQQPPPNPS NRLSRSALPALQLRNPLTQGRKPEDDVMSTSVYISSSGTKPITIPKQCRPPETDPMQM SMFSDMMDGSMVSHRHFSNGSWSDIGESMITSNCTFTVRKGVSLKIQIFKKMKMFQPP LPMDDDTDLMSVPMVQSVFNIDREALRREEQLQSSVVLGESRIGVEHLPIIEDENELE TPLVETRTLPIPNDVNANLSKNLSPTNPFIQDTLPPILETPKVEVRENGNMDTPTSQQ SPAASGGSMVSQESDSRKEETTKSDKNPPVQPVKQQKMEEKVEKPTKKKDELPAPPPP PKFPVKAKAPSKHQLMMEQLKASIEAEKNKPKKEVKSRVSLLPPPAPKPQKENKEGGE MTETPRRSISKTPLKTVNAKAKTSPAPPVERVKKERKPLYTPPPAKERVEKEKKPPTK AIVSPPSTGDKKPVVSSIPSTSSAPKGTYPTSSFAGGKIQAPRKASTASSVTKKKKPI DEKEKLARLHESIRAFDAIMIVMSQQNEANEKKLGHISEQYEKKTSELGDLKKMLDEA RRKFEADVEQMKSNNQQVIRNHANTVESMQKAHETQNAEKNKESERNLEDERARREAE ILAMNNRHQKVVACLDEKIAEAEKQCEQLSADKKTLQAALANDCDHRNQMLTKEISSL QTALEMKSAEMKDLRQKNQNLSLQVDEIPLKELEISKWKHKSNEYKQMLDQKINGEKI LVQQIEDLRRKQIHDEEEKEAMKRSFDLMQFKYENGDDPNVTSVMSAPMECRFGTPTK VQFRSRSSASGSRPISMAASNGDQRLSTSSHHDDSMNRSTISMYTSHIRLPENHADDV IYAPDEIISSRSGSISQRLAIAIEDDGEPILKSESRNASDSGIGLVM" CDS complement(join(1527925..1528058,1528845..1528957, 1529006..1529077,1529268..1529463,1529543..1529592, 1532873..1532945,1533528..1533609)) /gene="CBG10143" /locus_tag="CBG_10143" /standard_name="CBG10143" /product="Protein CBG10143" /note="Predicted" /db_xref="GOA:A8XAH3" /db_xref="UniProtKB/TrEMBL:A8XAH3" /protein_id="CAP29641.2" /translation="MSFLAIRMPFSRNTSPAVEASPTPTPELVFIGLIALFMFGCKAV MRLFTRKRNTNTAQTDTDVIYPSDERRATRSHQNFGFMDPPPRYEQIFKRGGGTPSVI TTREAPSVTRSSGDASLPPSYEQAAINARRESQLQSVIVSQPGFREVPLTAIDMEHPA MPSPSSTILDMESEIANIQNHAHACVTRYDSNHANEIARTLAATSTPSSSTALPELEA PEGGPPGYDAISLHNETISTR" tRNA complement(1534273..1534354) /gene="CBG28936" /locus_tag="CBG_28936" /standard_name="CBG28936" /product="RNA transcript CBG28936" /note="C. briggsae predicted tRNA" tRNA 1536355..1536436 /gene="CBG29015" /locus_tag="CBG_29015" /standard_name="CBG29015" /product="RNA transcript CBG29015" /note="C. briggsae predicted tRNA" CDS complement(join(1538503..1538865,1539274..1539430, 1539478..1539593,1539640..1539697,1540419..1540690)) /gene="CBG10146" /locus_tag="CBG_10146" /standard_name="CBG10146" /product="Protein CBG10146" /note="contains similarity to Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger) contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR017907 (Zinc finger, RING-type, conserved site), IPR018957 (Zinc finger, C3HC4 RING-type)" /note="Predicted" /db_xref="GOA:A8XAH4" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR013083" /db_xref="InterPro:IPR017907" /db_xref="UniProtKB/TrEMBL:A8XAH4" /protein_id="CAP29642.2" /translation="MVCCCDFRIAPVIYLMCFYCCYMILVFPIMEFVGWCLQYALGYE FGPDSPVSKWIYFGCLLMFIPMYIGLFYWSWVKHRAKQLFTPKWKTNEPLDEEDVICT ICYEIIVNPRTLRCQHSFCKKCIDQCLPQSRRCPSCQQWVYWSSRNKLFKSKVLRWVK ENGREEEYKEVVAIKKEQKVPKIGFWKKFWPMIVPFLEVHMVPREDRRARRVRGFRLR RNNIEPAAPAHAPQTLIVNVIDEMEDVTDQELDVSSVNPPVAALHIPMPNIVEVPETS GSSDSLECICHTFPDIAVSPYSDEHIVASSSSLSSISSHASDVQL" CDS complement(join(1544173..1544304,1544833..1545010, 1545276..1545391,1545439..1545489)) /gene="CBG10147" /locus_tag="CBG_10147" /standard_name="CBG10147" /product="Protein CBG10147" /note="contains similarity to Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger) contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR017907 (Zinc finger, RING-type, conserved site), IPR018957 (Zinc finger, C3HC4 RING-type)" /note="Predicted" /db_xref="GOA:A8XAH5" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR013083" /db_xref="InterPro:IPR017907" /db_xref="InterPro:IPR018957" /db_xref="InterPro:IPR039577" /db_xref="UniProtKB/TrEMBL:A8XAH5" /protein_id="CAP29643.1" /translation="MHDEDFCCAVCLDFFVEPCIIKCGHSFCHLCIESHLNVNEKCPL CRSYTGSPIRNRQLESLTMSYVASRNLSNAYYERMKFNQKKVLLQKRALALIYTGLKD KPGQSTELCNLVKNVDDEELKSEIRSQVRQQVGVGLEHVGDLENDTVTIRLKNSTR" CDS complement(1548627..1548749) /gene="CBG25917" /locus_tag="CBG_25917" /standard_name="CBG25917" /product="Protein CBG25917" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHM7" /protein_id="CAR99428.1" /translation="MNVKGLLLENSRYLFQLQNSTVFRNGNELQFPIERGQTGH" CDS complement(join(1550014..1550110,1550226..1550326, 1550817..1551017,1551060..1551959,1552007..1552116, 1553049..1553174,1553282..1553513,1553561..1553842, 1553890..1553952)) /gene="CBG10148" /locus_tag="CBG_10148" /standard_name="CBG10148" /product="Protein CBG10148" /note="contains similarity to Pfam domains PF03765 (CRAL/TRIO, N-terminal domain) , PF00650 (CRAL/TRIO domain) , PF04707 (PRELI-like family) contains similarity to Interpro domains IPR006797 (PRELI/MSF1), IPR001071 (Cellular retinaldehyde binding/alpha-tocopherol transport), IPR001251 (CRAL-TRIO domain), IPR011074 (CRAL/TRIO, N-terminal domain)" /note="Predicted" /db_xref="InterPro:IPR001251" /db_xref="InterPro:IPR006797" /db_xref="InterPro:IPR011074" /db_xref="InterPro:IPR036273" /db_xref="InterPro:IPR036598" /db_xref="InterPro:IPR036865" /db_xref="UniProtKB/TrEMBL:A8XAH6" /protein_id="CAP29644.2" /translation="MVQTYRSPVRIYKHPFEIVMAAYEMRFPTCPQIPIFVGSEVTYE YNSDDGAEWVIDRKCQLNVEAPYLVKKIAGVDYVYFSQKNSLDRRNRTLNIEATNISF ASRINVKENCTYYVHAENENWTCFEQSASLDVKNFFGLESAVEKLAVRQYGANLAKGK EILEFFIEELLKTTTHIERYRDPNAEETTSTADSAIELKESSDGEPVAVHQKPPMLAA ENDEMRTARATASFDDADSKLEAEYIRRFLGQLSPLEESRLCEIKYSLQAHHKGKLPN DAHLLRFLRARDFDVAKAKDMVHASIIWRKQHNVDKILEEWNRPTVIKQYFPGCWHNS DKAGRPMYILRLGQLDTKGMLRSCGVENLVKLTLSICEDGLQRAAEATRKLGTPISSW SLVVDLDGLSMRHLWRPGVQCLLKIIEIVEANYPETMGQVLVVRAPRVFPVLWTLISP FIDEKTRKKFMVSGGSGGDLKEELRKHIDEKFIPDFLGGSCLTTNCGLGGHVPKSMYL PVEEQEGASSSEDPLHSTYTNTATWRGYPVEVVIPIETAGCVLTWDFDVLKNDCEFSL YFSTEKIEQPAVRDGAQSPTTILNPVEMVSAAIGGASHQHPDLQCAPELKVGTPQLSV EEKPVLFQEGDSMQGSHYCSRAGTYIMQWRVPETTAGHSSTFDFGSHKGSVASLESCR SSSFSSIAPPTPPTPGTPRKS" CDS join(1558451..1558567,1558781..1558864,1558914..1559192, 1559789..1560043,1560095..1560216,1560709..1560835) /gene="Cbr-saeg-2" /locus_tag="CBG_10150" /standard_name="CBG10150" /product="Protein CBR-SAEG-2" /note="C. briggsae CBR-SAEG-2 protein ;" /note="Predicted" /db_xref="GOA:A8XAH7" /db_xref="InterPro:IPR026064" /db_xref="InterPro:IPR041384" /db_xref="UniProtKB/TrEMBL:A8XAH7" /protein_id="CAP29645.2" /translation="MFDRMTGNGNGNKMNMRISILDELLNREMDGSSDGSSARVNSLK HVIKRNKMDMADDAPSSLDLMRRIFQAEISREIHQIMERHTRTTLWPAIENLRKNGHV VDESVLNGLYCNILEAAKKLYQTKEDEPTPPPTNGNGFLDIGLGVGIQDQDSHDNNLK RGYESDSSDVSGVSHCSDAKRRRGRPRKDEEAYRLEMTPPTMNEVIRWNPDRIDMNTR FVTATKIAQVLGMPPSILFNKYPRMFRYSCDEDDKNILHDQNRLIRAPGRCYLLAAED ARQLVSPNYFQDILNASFLISEPLLSKIRNKAAATYDKYKVFLPQQQSSFI" CDS join(1561538..1561556,1562455..1562573,1562632..1563101, 1563147..1563435,1563464..1563597,1563657..1564023, 1564075..1564275,1564319..1564489,1565089..1565187) /gene="Cbr-dat-1" /locus_tag="CBG_10151" /standard_name="CBG10151" /product="Protein CBR-DAT-1" /note="C. briggsae CBR-DAT-1 protein; contains similarity to Pfam domain PF00209 Sodium:neurotransmitter symporter family contains similarity to Interpro domain IPR000175 (Sodium:neurotransmitter symporter)" /note="Predicted" /db_xref="GOA:A8XAH8" /db_xref="InterPro:IPR000175" /db_xref="InterPro:IPR037272" /db_xref="UniProtKB/TrEMBL:A8XAH8" /protein_id="CAP29646.2" /translation="MQLVPTDDPDEKIRRPSNGIQNATLPTGGPVIEEQKDPAREQWS GKLDFLLSVVGFAVDLGNIWRFPYLCFKNGGGVFLIPYSIMVLLTGVPLFYMELCLGQ YYRKGAITTWGRICPLFKGIGYCVILTAFYVDFFYNVILAWGLHYLYTSFSFNLPWAS CNNTYNSAACYEPHWSEDGTTMCRSANESVSAEKISAAEEYFYKGFLGLHEANAPNSH VIRSMTDLGGVRWDIALSLFVVYLICYFSMWKGIHTSGKVVWFTALFPYVVLGILFIR GVTLPGWQKGIEYYLRPNFEMLRRICYIFQKPSVWQDAATQVFFSLGPGFGVLMAYSS YNDFHNNVYVDALFTSFINCATSFLSGFVIFSVLGYMSCKSGKPIEAVAQEGPGLVFV VYPEALSTMPYAPFWSVLFFLMLMTLGLDSSFGGSEAIITGLSDEFPILKKNREIFVG CLFSFYMIIGTAMCTDGGILIMEWLIIYGTTWGLLIAVFCEAMVIAYIYGLRQFVRDV KEMMGFRPGNYWKFCWSCAAPAILLSMITSNFINYQALTYQDYTYPTAANVIGIIFAL SGASFIPFVGIYKFINARGNTMAEKWERVTMPYRKRPNQTEYIPIPTTQPHCDIML" CDS join(1565791..1566092,1566137..1566727,1566777..1566972) /gene="CBG10152" /locus_tag="CBG_10152" /standard_name="CBG10152" /product="Protein CBG10152" /note="contains similarity to Pfam domain PF07735 F-box associated contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /note="Predicted" /db_xref="InterPro:IPR012885" /db_xref="UniProtKB/TrEMBL:A8XAH9" /protein_id="CAP29647.1" /translation="MKFPTYPSVVRKEILLEMQIHELFLLSLTSKNARKIVSTKKFKS TGTCFDFSKYSGISTLVFEEWTEDIDVVRWAFRKPPVSEETLSAEILNIPGIDSPCRI TISPYSGIPTIWCSSRLKKVFPSFIHRYFCGLFNVPSDVQMVMDLKHLHSLPNTEFVK NVRLIGSETNAKLVNSFFGAVPVSYCAILDTKIRGDLNMDSSLLKVENICLRNAQTFN IEHLLRFEGKHAFLSQSHLTVQEIVRFIQHWIDGFGLQNLETLVIFSRAVDNFSESIP EEIELKPWDSAKRPSGFYIRSAMRDFMGLSPLLQDCSEAQDVERNEDGLLATVLLGNN TFMFNVWRDTDPKGPFQGDNEWIRRRIR" CDS join(1567970..1568104,1569113..1569646,1570897..1570926) /gene="CBG10153" /locus_tag="CBG_10153" /standard_name="CBG10153" /product="Protein CBG10153" /note="contains similarity to Pfam domains PF02214 (K+ channel tetramerisation domain) , PF00786 (P21-Rho-binding domain) contains similarity to Interpro domains IPR000095 (PAK-box/P21-Rho-binding), IPR000210 (BTB/POZ-like), IPR003131 (Potassium channel, voltage dependent, Kv, tetramerisation)" /note="Predicted" /db_xref="GOA:A8XAI0" /db_xref="InterPro:IPR000095" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR003131" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR036936" /db_xref="UniProtKB/TrEMBL:A8XAI0" /protein_id="CAP29648.2" /translation="MPPPPLISLDVEGVFFKTRIATLKSIEGTYFTKLFETNWREQLD RDGRLFIDRDSSVFPVILNFLRDHDKCPLPKDEYQLMRILREAVYFKIGPLRNLIEHK LRASPSCTCPPELPSTPIPTQKENIPLPRSVLLSKPPPPPPPLPSLIQPKDTVQIPLR KPPVDRSSKKLKTSADSISLPRNFTHIAHVGWNGASVLFDKKMTDDPTVKKICDAAAE AVDLNSSSNCIENE" assembly_gap 1572738..1572765 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(1573982..1574107,1574161..1574439,1574483..1575213, 1575439..1576089,1576137..1576722) /gene="Cbr-rnr-1" /locus_tag="CBG_10154" /standard_name="CBG10154" /product="Protein CBR-RNR-1" /note="C. briggsae CBR-RNR-1 protein; contains similarity to Pfam domains PF02867 (Ribonucleotide reductase, barrel domain) , PF03477 (ATP cone domain) , PF00317 (Ribonucleotide reductase, all-alpha domain) contains similarity to Interpro domains IPR013509 (Ribonucleotide reductase large subunit, N-terminal), IPR013346 (Ribonucleoside-diphosphate reductase, alpha subunit), IPR005144 (ATP-cone), IPR000788 (Ribonucleotide reductase large subunit, C-terminal)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XAI1" /db_xref="InterPro:IPR000788" /db_xref="InterPro:IPR005144" /db_xref="InterPro:IPR008926" /db_xref="InterPro:IPR013346" /db_xref="InterPro:IPR013509" /db_xref="InterPro:IPR039718" /db_xref="UniProtKB/TrEMBL:A8XAI1" /protein_id="CAP29649.1" /translation="MQRHNSTYVVKRDGRMENVHFDKITSRIQKLSYGLNMDFVDPVA VAIKVISGLYKGVTTVELDNLAAETAASMTTQHPEYALLAARIAVSNLHKKTNKVFSE VMKTLHEFHHPHTGKHAPMISDETWEIIQKNADKLNSAIVYDRDYSYTYFGFKTLERS YLLKINKEVVERPQQMLMRVAIGIHGKDISAAIETYNLMSERYMTHASPTLFNSGTCR PQMSSCFLLTMSEDSILGIYDTLKQCALISKSAGGIGLNVHKIRATGSVIAGTNGTSN GLIPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHADIFEFVALRKNTGPEEERARDL FLALWVPDLFMKRVEKDQDWSLMCPCECPGLDDCWGEEFETLYAKYEAEGRVRKTVKA RKLWEHIVSNQIETGLPYITYKDAANRKSNQQNLGTIKCSNLCTEIIEYSAPDEVAVC NLASIALNRFVTNDKKFDFVKLAEVTKVITKNLNKIIDVNYYPIEEARNSNMRHRPIG LGVQGLADCFMLMRYPFTSPQARDLNKRIFETIYYAALEASCELAERDGPYSTYEGSP VSKGQLQFDMWGVTPTNQCNWDELRKKIAKHGVRNSLLMAPMPTASTAQILGNNESIE PYTSNIYSRRVLSGDFQIVNPHMLKDLVERGLWTDEMKNRLIANNGSIQNIPGIPDDI KELYLTVWEISQKEIIEMAADRGAFIDQSQSLNIHMAKPSYAAITSMHFYGWKKGLKT GMYYLRTKPAVNAVQFTVDKAALQQKNVQKAESRVASPEAQDEGCLMCSG" CDS join(1577259..1577303,1577351..1577412,1577465..1577538, 1577588..1578105,1578156..1578257) /gene="Cbr-rnh-1.0" /locus_tag="CBG_10155" /standard_name="CBG10155" /product="Protein CBR-RNH-1.0" /note="C. briggsae CBR-RNH-1.0 protein; contains similarity to Pfam domains PF01693 (Caulimovirus viroplasmin) , PF00075 (RNase H) contains similarity to Interpro domains IPR017067 (Ribonuclease H1, eukaryote), IPR011320 (Ribonuclease H1, N-terminal), IPR002156 (Ribonuclease H domain)" /note="Predicted" /db_xref="GOA:A8XAI2" /db_xref="InterPro:IPR002156" /db_xref="InterPro:IPR009027" /db_xref="InterPro:IPR011320" /db_xref="InterPro:IPR012337" /db_xref="InterPro:IPR017067" /db_xref="InterPro:IPR036397" /db_xref="InterPro:IPR037056" /db_xref="UniProtKB/TrEMBL:A8XAI2" /protein_id="CAP29650.1" /translation="MGKNDQYYAVARGRQVGIYRTWNECKTQVDGFQSARYKKFPSEA EARKFVADNINVAGSMPKPDVPTVKVGASLNNKSTPSTPDGTRKRKGNESWRSSPAKR SKPDPEVTDPEFIDAPVVYTDGACSKNGKAKARAGWGVYWGEDSEDNAFGPVYGTATN NRGELIAVEKALEKAIEKGLTKLVVKTDSNLLVQSINIWIHGWKRKGWKTATGSDVLN KDVLVKIDNLRQKLKVKFMHVRGHAGVDGNEKADKLARKGAAMYTKMG" assembly_gap 1580293..1580824 /estimated_length=532 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(1589822..1590079,1591792..1591848)) /gene="CBG10158" /locus_tag="CBG_10158" /standard_name="CBG10158" /product="Protein CBG10158" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XAI3" /protein_id="CAP29651.1" /translation="MAKYNSGYDSCPLSIVHGKNPKSIKSLNDFEKSESQNLRISKSQ NLRISESQNLRISESQNLRISESQNLRISESQNLKISESQNLRISESQNLRISESQNP RI" CDS join(1595381..1595449,1600912..1601089,1601136..1601229, 1601274..1601370,1601986..1602142,1602203..1602275, 1602322..1602381,1602576..1602706,1602765..1602945, 1602995..1603142) /gene="CBG10160" /locus_tag="CBG_10160" /standard_name="CBG10160" /product="Protein CBG10160" /note="contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domain IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8XAI4" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8XAI4" /protein_id="CAP29652.1" /translation="MDFTEDEAEYEQWTHIERRVPFQGYRTYVASTYIGFNVVGFAIN AWVLYVVAPLLFAPAIKVPKSILFYIFALCVGDLMTMIAMLLLVIELVFGTWQFSSMV CTSYLIFDSMNKFMAPMIVFLISRTCYSTVCLDKTRGEKAATLKYAIIQFCIALACVM VLLWPVFAYSQVFTFYMNPNATSQEVTVMRKCGFFPPPQIEFWFNLIACITSYAVPLF GIIYWYVSVPFFLKRRALTTLVASSSMDAALRKVITTVLLLTVIYVLCWTPYWVSMFA NRIWTMEKKSIIIFSYFIHLLPYISCVAYPLIFTLLNRGIRSAHAKIVADQRRRFRSL TDEASSQIRTAIRTIPGTKMKKQDFLTRTEEISSDKAASEAISEFRDALPSQTSFPDE TLL" CDS join(1604156..1604293,1604359..1604640) /gene="CBG10161" /locus_tag="CBG_10161" /standard_name="CBG10161" /product="Protein CBG10161" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XAI5" /protein_id="CAP29653.1" /translation="MSSSQIRNKIGQAMSKIRRCLEVDRLQPSEQGIQNLDLIQLKKV LKDNWDNHHRLVKNMNALMQLDISWAALIMDNPSERRQKREFIESNGNYAALWESCSQ AIRHNKRLYEATMRLILQRHPDANLPIRLIFEIFDYS" CDS join(1605408..1605436,1605486..1605574,1605615..1606086, 1606133..1606219,1606269..1606440) /gene="CBG10162" /locus_tag="CBG_10162" /standard_name="CBG10162" /product="Protein CBG10162" /note="contains similarity to Pfam domain PF04370 Domain of unknown function (DUF508) contains similarity to Interpro domain IPR007465 (Protein of unknown function DUF508)" /note="Predicted" /db_xref="InterPro:IPR007465" /db_xref="UniProtKB/TrEMBL:A8XAI6" /protein_id="CAP29654.1" /translation="MNLDGVQLLSQDQLPPVLRLFIDPSLKYSKHKHTVETSRDCVHH TYTLVLTREPSTQPDEYIHLKLAPTTSTDISTQLSSAREMMSKSSLSETSPKTDNWSF TEKKMDSIYYTIPMKTDPVSFQKNNPSEKTTKPTSSGSSSVSTSATSTVSSSQTSSVP SSSLPTFDPNYEKIPRKVVTMVHVKFILVHRDTFKRRVQSTFTDEFQSDCRLEDVIVN FQQLCARQLRDARLQPRLSYCIGEISGKNSKPVLSSDLGKTLTQLAASKNVFQFALIV DNFDNS" CDS 1607069..1607488 /gene="CBG10163" /locus_tag="CBG_10163" /standard_name="CBG10163" /product="Protein CBG10163" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XAI7" /protein_id="CAP29655.1" /translation="MSQSHRIRRRIRCLVIYIRIVGDFHRQILHQQHPMGYNPRNMEM EQLRKTMKKNWKIYHRLMKYHNLLIIQNDAWAALIEGNPDEEEKHKRYVESNGNYMEV LGDCLRTIRHCRRIYEATVREIIRRCPDSMLPLCLDH" CDS complement(join(1607591..1607947,1608182..1608301)) /gene="CBG10164" /locus_tag="CBG_10164" /standard_name="CBG10164" /product="Protein CBG10164" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XAI8" /protein_id="CAP29656.1" /translation="MHSLKIQLIFKDSDVNDPTVIDDSDLIKKVPVFARSLNPYNLDW NTMKPVKTEPLKIKFSKEAGEFIFANFHSYKYPEDDAKLEDYPEANEKNLEELKIIIE LANFLECDDFRKCIGFVIAKKLESKTAQEIVDYLGLECNPNDLDDSWIHPKLETEE" assembly_gap 1608446..1608605 /estimated_length=160 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(1609501..1609590,1609746..1610063, 1610370..1611053,1611104..1611207,1611251..1611461, 1611507..1611566)) /gene="Cbr-set-31" /locus_tag="CBG_10165" /standard_name="CBG10165" /product="Protein CBR-SET-31" /note="C. briggsae CBR-SET-31 protein; contains similarity to Pfam domain PF00856 SET domain contains similarity to Interpro domains IPR001214 (SET domain), IPR001525 (C-5 cytosine methyltransferase)" /note="Predicted" /db_xref="InterPro:IPR000953" /db_xref="InterPro:IPR001214" /db_xref="InterPro:IPR016197" /db_xref="UniProtKB/TrEMBL:A8XAI9" /protein_id="CAP29657.1" /translation="MPVAEKIDTERYEIEKISGNKIINNTILYKIQWVGYTKDYDSEE AEWRMTCDEKLIEFSLSTLDKNRYIDRLEPMLLNYRKFRDDAKSIMNFIDPVSILALT TFQCGSVKFVDQDTVSSRFLLLEYLRDSKQQYLLHTAFLPSEDVIDESEHRYARELQS RMEVFSEHPLVKIIIPLDIEGVFYSPPPLSNLIFEPVTVWMCENSSHYENLFVSKSED VGFNGTKPFLDSEYLEPKGPKQDPKYFHAFEANENKKFYNGMKRLDYQQDPRFHCNLK LISEIGRGWVLRASHVIPKETPIMMMAGVIGPWKRAHNSLVRSGERIAFSSFIEIPGT EMCLDRRLYHDFTKYIPHSCAPTCSVRLVKSGNEYPDLVVYSLTDINASNNFSISIDY YQGFRKYVNRYFWTNRHPDGKIFNLYENEIDFVHCQCMERQCRTILYIDKSLKSHDPS VGKEKKLENLDPNFEFRGMSVVADTKRIWEIQKGVFVE" assembly_gap 1612100..1612109 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(1612615..1612872,1612931..1613416)) /gene="CBG25918" /locus_tag="CBG_25918" /standard_name="CBG25918" /product="Protein CBG25918" /note="contains similarity to Pfam domain PF00907 T-box contains similarity to Interpro domain IPR001699 (Transcription factor, T-box)" /note="Predicted" /db_xref="GOA:B6IHM8" /db_xref="InterPro:IPR001699" /db_xref="InterPro:IPR008967" /db_xref="InterPro:IPR036960" /db_xref="UniProtKB/TrEMBL:B6IHM8" /protein_id="CAR99429.1" /translation="MTAVSLVGGAPRGLDLEMIAATKPRLMFPSTTLQIDGLDPNAEY RIYLKLVRSSYRYQLKEQRWVSDKVPHPKEDLEEKPILNKYRQQTGEFFMRNGVSFEN ARISFNKIQTRRSTDTFYVRKYFKYSQQIHVDLVRPGDGNRCCKVYPIVGGEFVAVSH LESSRMSQYYAIGFENIRQFGKKRQPNYKTSHKIHPVIVMNHPSEHPSNFYGFQIEDP DDMPPTRLFDGSVVTRKHGRTYYYPPVCQ" CONTIG join(complement(CAAC03001334.1:1..29359),gap(161),complement (CAAC03001333.1:1..81112),gap(2940),complement (CAAC03001332.1:1..94780),gap(25),complement (CAAC03001331.1:99..57796),AC084685.1:29476..30005,complement (CAAC03001330.1:1..19370),gap(7538),complement (CAAC03001329.1:451..103698),AC084478.1:39477..41505,complement (CAAC03001328.1:1..40215),gap(824),complement (CAAC03001327.1:1..4846),gap(4459),complement (CAAC03001326.1:1..23934),gap(2289),complement (CAAC03001325.1:1..38236),gap(772),complement (CAAC03001324.1:1..24174),gap(228),complement (CAAC03001323.1:1..2634),gap(1000),CAAC03004578.1:1..1360,gap(10), CAAC03004579.1:1..3638,gap(550),CAAC03004580.1:1..10430,gap(71), CAAC03004581.1:1..11316,gap(1000),CAAC03001505.1:1..3820,gap(3474), CAAC03001506.1:1..37946,gap(10),CAAC03001507.1:1..9965,gap(1090), CAAC03001508.1:1..21721,gap(10),CAAC03001509.1:1..7811,gap(620), CAAC03001510.1:1..26097,gap(338),CAAC03001511.1:1..12311,gap(517), CAAC03001512.1:1..2020,gap(267),CAAC03001513.1:1..69924,gap(97), CAAC03001514.1:1..18986,gap(701),CAAC03001515.1:1..75681,gap(10), CAAC03001516.1:1..6120,gap(1000),CAAC03005001.1:1..6752,gap(102), CAAC03005002.1:1..1268,gap(1000),CAAC03003755.1:1..34953,gap(145), CAAC03003756.1:1..53639,gap(1000),complement (CAAC03004269.1:902..6311),AC084546.1:14462..16005,complement (CAAC03004268.1:352..1321),AC084546.1:16976..17505,complement (CAAC03004267.1:660..4631),AC084546.1:21478..22005,complement (CAAC03004266.1:3689..15832),gap(10),complement (CAAC03002157.1:1..46300),gap(370),complement (CAAC03002156.1:1..18334),gap(517),complement (CAAC03002155.1:1..2458),gap(126),complement (CAAC03002154.1:1..36970),gap(739),complement (CAAC03002153.1:1..25934),gap(1169),complement (CAAC03002152.1:1..18497),gap(337),complement (CAAC03002151.1:1..2944),gap(612),complement (CAAC03002150.1:1..17383),gap(99),complement (CAAC03002149.1:1..34148),gap(223),complement (CAAC03002148.1:1..15019),gap(541),complement (CAAC03002147.1:1..2710),gap(10),complement (CAAC03002146.1:1..12457),gap(401),complement (CAAC03002145.1:1..40827),gap(3180),complement (CAAC03002144.1:1..23063),gap(130),complement (CAAC03002143.1:1..45155),gap(133),complement (CAAC03002142.1:1..10672),gap(2031),complement (CAAC03002141.1:1..927),gap(1000),CAAC03003524.1:1..1791,gap(441), CAAC03003525.1:1..64720,gap(644),CAAC03003526.1:1..144446,gap(28), CAAC03003527.1:1..7527,gap(532),CAAC03003528.1:1..27621,gap(160), CAAC03003529.1:1..3494,gap(10),CAAC03003530.1:1..1740) //