LOCUS HE601409 1191916 bp DNA linear CON 17-SEP-2015 DEFINITION Caenorhabditis briggsae AF16 supercontig from assembly CB4, cb25.fpc0003. ACCESSION HE601409 CAAC03000000 CAAC02000438 VERSION HE601409.1 DBLINK BioProject:PRJNA10731 BioSample:SAMEA3138181 KEYWORDS . SOURCE Caenorhabditis briggsae ORGANISM Caenorhabditis briggsae Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 1191916) AUTHORS Howe K.L. CONSRTM WormBase Consortium JOURNAL Submitted (03-OCT-2011) to the INSDC. WormBase group, European Bioinformatics Institute, Cambridge, CB10 1SA, UNITED KINGDOM. REFERENCE 2 (bases 1 to 1191916) AUTHORS Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R., Waterston R.H. TITLE The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics JOURNAL PLoS Biol. 1(2), E45-E45(2003). PUBMED 14624247 REFERENCE 3 (bases 1 to 1191916) AUTHORS Ross J.A., Koboldt D.C., Staisch J.E., Chamberlin H.M., Gupta B.P., Miller R.D., Baird S.E., Haag E.S. TITLE Caenorhabditis briggsae recombinant inbred line genotypes reveal inter-strain incompatibility and the evolution of recombination JOURNAL PloS Genet. 7(7), E1002174-E1002174(2011). COMMENT Details of C.briggsae assembly version CB4: To improve upon the C. briggsae nuclear genome assembly CB3, 167 AF16/HK104 advanced-intercross recombinant inbred lines were successfully genotyped at 1,032 single nucleotide polymorphism (SNP) markers. The resulting data were used to estimate high-density genetic maps. Sequences were assembled by combining the physical and genetic positions of the SNPs to inform the process of ordering and orienting the cb25 supercontigs into chromosome assemblies. 37 of the cb25 fingerprint contigs were split into 100 supercontigs to resolve discrepancies between the physical and genetic orders of SNPs. 638 sequence supercontigs comprise the CB4 assembly. The total nuclear genome content decreased from cb25 to cb4 because of the removal of three supercontigs containing mitochondrial genome sequence (totaling 20.1 kbp). Assembly_name: CB4 Assembly_program: Phusion Seq_technoloy: capillary (whole-genome-shotgun) Seq_coverage: 10x Annotation details: Coding seqences below are the result of integration and manual review of the following data : computer analysis using the programs Genefinder (version 980506; P. Green, unpublished data), FGENESH (Salamov and Solovyev 2000), TWINSCAN (Korf et al. 2001), and the Ensembl annotation pipeline (Clamp et al. 2003); similarity to other proteins from BlastX analyses (http://blast.wustl.edu); sequence conservation with C. elegans using Jim Kent's WABA alignment program (Genome Research 10:1115-1125, 2000); individual C. briggsae GenBank submissions; and personal communications with C. briggsae researchers. tRNAs are predicted using the program tRNAscan-SE (Lowe, T.M. and Eddy, S.R., 1997, Nucl. Acids. Res., 25, 955-964). FEATURES Location/Qualifiers source 1..1191916 /organism="Caenorhabditis briggsae" /strain="AF16" /mol_type="genomic DNA" /note="supercontig cb25.fpc0003" /db_xref="taxon:6238" CDS complement(join(3648..3713,3760..3849,3900..4240, 6126..6220,6316..6452,6500..6697,7763..7886,9540..10201)) /gene="Cbr-pqn-18" /locus_tag="CBG_00045" /standard_name="CBG00045" /product="Protein CBR-PQN-18" /note="C. briggsae CBR-PQN-18 protein ;" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WM73" /protein_id="CAP21577.2" /translation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gene="CBG27854" /locus_tag="CBG_27854" /standard_name="CBG27854" /product="Protein CBG27854" /note="Predicted" /db_xref="GOA:B6IEE9" /db_xref="UniProtKB/TrEMBL:B6IEE9" /protein_id="CAR98279.1" /translation="MEKHRGEEIWKTGGKRNMNAQMLVLIAIGPWATRFFLRLPWMAD REKGGRSRVLWSTKKAEPYEELGWDVMGRKKKLMMM" assembly_gap 25207..25785 /estimated_length=579 /gap_type="within scaffold" /linkage_evidence="unspecified" tRNA 35643..35714 /gene="CBG28348" /locus_tag="CBG_28348" /standard_name="CBG28348" /product="RNA transcript CBG28348" /note="C. briggsae predicted tRNA" tRNA complement(37594..37675) /gene="CBG28227" /locus_tag="CBG_28227" /standard_name="CBG28227" /product="RNA transcript CBG28227" /note="C. briggsae predicted tRNA" CDS join(42398..42480,42555..42660) /gene="Cbr-gpc-1" /locus_tag="CBG_00049" /standard_name="CBG00049" /product="Protein CBR-GPC-1" /note="C. briggsae CBR-GPC-1 protein; contains similarity to Interpro domains IPR001770 (G-protein, gamma subunit), IPR015898 (G-protein gamma-like domain)" /note="Predicted" /db_xref="GOA:Q4VT26" /db_xref="InterPro:IPR001770" /db_xref="InterPro:IPR015898" /db_xref="InterPro:IPR036284" /db_xref="UniProtKB/Swiss-Prot:Q4VT26" /protein_id="CAP21578.2" /translation="MENIKTTTEQLRTEANIQRKKVSEVAKDLVEFCEKNKATDMLVS GPLDAHNPFQEKKSCSVL" CDS complement(join(44910..44951,45003..45749,46016..46147, 46802..46990,47037..47171)) /gene="Cbr-bcat-1" /locus_tag="CBG_00050" /standard_name="CBG00050" /product="Protein CBR-BCAT-1" /note="C. briggsae CBR-BCAT-1 protein; contains similarity to Pfam domain PF01063 Aminotransferase class IV contains similarity to Interpro domains IPR018300 (Aminotransferase, class IV, conserved site), IPR001544 (Aminotransferase, class IV), IPR005786 (Branched-chain amino acid aminotransferase II)" /note="Predicted" /db_xref="GOA:A8WM75" /db_xref="InterPro:IPR001544" /db_xref="InterPro:IPR005786" /db_xref="InterPro:IPR018300" /db_xref="InterPro:IPR033939" /db_xref="InterPro:IPR036038" /db_xref="UniProtKB/TrEMBL:A8WM75" /protein_id="CAP21579.1" /translation="MPAILSRVAPRTFTVGSRLMASAARLETVPREEIHKEYDRKKTF YHKDLEIHLANPEQLKTKPLDPTKLKFGHTYADYMMTCDWDATSGWHHPKIEPIGELK IHPGAKVLHYASELFEGMKAYRGVDNKIRMFRPEMNMARMKRTAIRAALPDFDSEEMI NVLTEMLRLDQEWVPNSDVCSLYMRPTLIGTDPTLGVGCATEAKMFVITGPVGAYYST GFQPVSLLADSRFIRAFPGGVGAYKMGCNYAPTIWVGKEAASKNCQQVLWLYGENEDL TEVGTMNIFLFWKNEEGDMELITPPLHRGLILPGVTRDSLLELGREWGEYKVTERTLN MQEVKKALAEKRLYEMFGSGTACVVSPVGKILYHNKVTDEYEELHIPTMSSKHGVMQK FYNTINDIQYGRLIKDGWMRDI" CDS complement(join(53550..53630,54989..55150,55349..55880, 56196..56707,56755..57189,58143..58307,58358..58507, 59661..59768,59822..59914,63620..63710,63764..63915, 63967..64142,64192..64258)) /gene="CBG00051" /locus_tag="CBG_00051" /standard_name="CBG00051" /product="Protein CBG00051" /note="contains similarity to Pfam domains PF06723 (MreB/Mbl protein) , PF00012 (Hsp70 protein) contains similarity to Interpro domains IPR001023 (Heat shock protein Hsp70), IPR013126 (Heat shock protein 70), IPR004753 (Cell shape determining protein MreB/Mrl)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:E3CTV0" /db_xref="InterPro:IPR013126" /db_xref="InterPro:IPR029047" /db_xref="InterPro:IPR029048" /db_xref="UniProtKB/TrEMBL:E3CTV0" /protein_id="CBX33029.1" /translation="MKLLIFGPCGLLAALCCFYQPTDAALAAMSIDLGSQFIKIGLVK PGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSSSHPQSSYNFLLSLIARKEG DDAFTAYKKTFPFTAFEFDEVKKTVIFPYKEEKYNVETLLAMILWNAKKVTEAYADQT VKDVVITVPIFLNQAERRAIATAAEIAGLNLLQLLNDGSAAALNYGVFRRKEITEKPM HMLIYDMGAVKTTATIVQYVLESTRKDGKDKQPTLRTVGVGYDKTLGGLEITNRVRDH LERVFRDTVSTSKDITTNARAIGKLHKEAERVKQVLSANTETYAQVESLFEEQNFRAK VTRDELEKMIEDLEPRIAAPILDALGMSQLKVEDVDLIVLMGAGTRVPKVKEILKSIL KDKEISNFLNTDEAIAMGAVYQAAHLSKSFKVLPFNIHEKILYPVFVNFQTKTEEGRM KPIRKSLFGENYPVPNRVMHFASYSDDFKIEIQDADKNPLSEIEFTGVKDAIEKEVTD ENSILKGVKTTFSIDLSGIVSVEKASVVVEKIPTTEETEKYEIEKKEFEEWEKEQEEL KKKEKAEKKEKEEKNKAEGEKADDEEKEDESEKKTEDVEKPAPVKKTKPVEPKPKKIN VALTVKETKTDNVDLNKEEVATAKKTLSDFEQKEQEKHDREEAMNLLEGLLYDLAVRL EDGEEYAEYVTEDEKKAILEEVSILKLWFEDDVSLDTKKEEFDERRKKLEELTAKPNS RKQEHIDVPKVAEVLEDNFNRSMTFHGMALNLTQHEEGNKTFTDTELEVLTKLIETTT EWWNEKKELFDKQAKNEEPAVKASEIAEKARDLEREVRYLVNKLKIASSKKTKEEKKK AKKEKKDAEEAKTDEGANVDAPDAETPPPAENDESTTAEPKKEAEHDASEL" CDS join(61161..61259,61308..61412,61500..61598,61643..61723, 61773..61976,62033..62101) /gene="CBG00052" /locus_tag="CBG_00052" /standard_name="CBG00052" /product="Protein CBG00052" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WM77" /protein_id="CAP21581.1" /translation="MPTTTEALHIPITIHKPNLDFEARQVAVFKEVIENFEVKCCDEH DMERQKIVEKAKRALQSMQNLWEENEAEEIRKLREFAQSKGLTFEDVAKLKTNINYHK CSYQLATWCQKLTMIQQNYQASHSERLLTMKMPPGSHEISQLHFQINYRLAIMAYVVI SNVPNARVRRMNPFQVICGAQLLIRARILPDPASYHLMAMFIEGSVRDANSLLLNQPV " CDS join(65130..65970,66043..66156,66272..66447) /gene="CBG27855" /locus_tag="CBG_27855" /standard_name="CBG27855" /product="Protein CBG27855" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEF0" /protein_id="CAR98280.1" /translation="MSNNYVPPDSSSQGERSDRSEQHNGPRMATAARAEIVMREVQVI HLTPCLRLDGTVDWANPNEPSADSEELDKSDDDGSGHEGAIGGPQQQNGRQMAREPMK VIIREYPVHSVEASGHLQRWEPGNLHGPSYHKGFIRNRFSRNAEEQDRNHHRQGAHAD PDEHRDSHRGRQVAVISPNSYSRKFNQIRVGNPVSRQECVNDYSTRGRKGSSRYAAVR DNDRSDFDSHRGRPTANSTVNRSNYAQGFFIERNRLGHQGEYSDGERERSSRYESRNN AHRSDGQSGSQRRPTRSDSFDAMVNQAYYDFAMNNGPTPIPPYDNIRRLHQACIEHQE NRRARQNGKLPPYERRYRYPGITPEPRLEFDFLNKTGPFRRT" assembly_gap 70515..70781 /estimated_length=267 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(71449..71501,71645..71881,72077..72201,72247..72419, 72604..72834) /gene="CBG00055" /locus_tag="CBG_00055" /standard_name="CBG00055" /product="Protein CBG00055" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WM78" /protein_id="CAP21582.2" /translation="MSDEAFRSRFHLNDADNKKKYREDHVEKFNDSVEFLQNVTGISQ EDAEEKILNDLIRITFVETNLTVNGQQNAEQLFANLLLAINEEQEIPFKSAQDFENFR KTIHVDEELKNFTEQEAQLDYSSLFYISKTIPGFVYDKASGRLGLSPDADRSLLLNAP IFTDTINSSHPLKLDLSRTVDACAINACTTYPDRQQTSIHSCISPNNPRLQVETFRIE PTKLCLVDADFERAKENIDKRKSQSFEKFFAVYGNLNKEEAGEDQKEMEAADDV" CDS complement(join(74731..74897,74939..76043)) /gene="CBG00056" /locus_tag="CBG_00056" /standard_name="CBG00056" /product="Protein CBG00056" /note="Predicted" /db_xref="GOA:A8WM79" /db_xref="InterPro:IPR039908" /db_xref="UniProtKB/TrEMBL:A8WM79" /protein_id="CAP21583.1" /translation="MYGKNEQQALRPQFVLFNCTRQPQLVLLGVHRKENRYLKLEFEH PQHQFKVHSCDCQTPTMESDLNPLHTSHCSEIGKIVVDCWNSFNNKREQYVYNKESKI LEQVHRSDIMFRPDLNISRHVMICDIGSGVNISIEKDADGLCQFRHEEGQTVKLPDSV VQQFVSDNDVIPEPEQPPENVFQQYFQTLPDFITLFCPCFNRINICVKITDGTYLKYY FNEKRMVRTINCPVCPEKITQNFLVPMYFDCREGQDNVIHCRNKTTNLFEQYIYDWNA SELKQVFLPEFPYDGSRRQDSDSYFFKIDDIIISKEGEYLMLEILRSSNKRVRFGPVA VNTMTMQYKIFEENERERKSKEIQNNSSRAEDVEGFSPTFSQELHNRIRGCQSSEFFL DHGNYDKLYEFVENVGKLIAHNNKNRFNTNQ" CDS complement(join(80114..80267,80318..80583,80631..81119)) /gene="CBG27856" /locus_tag="CBG_27856" /standard_name="CBG27856" /product="Protein CBG27856" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEF1" /protein_id="CAR98281.1" /translation="MTQTSKRMKEMIQRKVKTTKPIFISIRRSGETIRIDDFTYQIIR TRAALERPPNTELSNLYVDNPFSNVWTSQTSQYGDELSEFITNVRKLFPNAPIDYLSI NLNRAQPHADLIDLVVPRQLSKVICSFHGYNILNSNLLETFSVLDCCAFRAYGPPFDL KAINLQADFKNSMYEFMLDNGMFYGENEIFLINGTQFTNRDANLLIERWKNGGLERCR AIKVRNFRNFDMNLVSNGLINCEWNSSIMERYFRTSQAILYDLKGHIIFSNDDVATVR YVEEDQMLYIIFWKVNDLPLRFPNLI" CDS join(84576..84676,84721..84849,84897..85107,85609..85862, 85911..86030,86082..86156,86203..86355,86612..86743, 86788..86892,86937..87056,87254..87373,87879..88046, 88090..88209,88253..88363,88407..88511,88555..88693) /gene="CBG27857" /locus_tag="CBG_27857" /standard_name="CBG27857" /product="Protein CBG27857" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEF2" /protein_id="CAR98282.1" /translation="MAFSVDSNVNMIRYLGTEKMNEIVEEMPKDLLEVVSNIVATVDK EGRGPNGKIDMAKTVNIQYSPQIQRTASRIRMIIGSSIDPTIAASWLVSEILGLFENF SDAIKVIKKRLMFPEERDLMEPLRKAEKIVDEALNKMRAQFKNMKKIRTKAVQKECHN CTGILAKQEKAFFEKNASQIKLEELKKELEGIESENGILVGSIQSLQANCRGLEETKR MFKQKTLEAQEAQRRWEEIKNARASRDMEHLMNEKVKLESEAARQERMIQQNEEQIES NRQQLVKLEEENQLGQNVTARLEQQYEEVANENTKTKAEIDEIVAALEHQKNVEKNRK EQEARTMKELQMKMLPSTKFSPFNTQPTPEYNKQYAESGNQKFNLPTKNSREVQIKET IPKATYTCQNPSEPWSQLRSVLDLHRSCNQERNQEVTVNVYSSTQVREYHHNVGNDLT NRNLPHSKMQNSQMNQSITANVYSPPQVREHQHHVDNYYRNRNLQRNTMQNLHMNQSH TDTAHNQQNGKKYLLHVENALNNLNAKDCLLNVDNGAYNYNLQRIDMQVSQLKQLTSA SAYNLRSSMENVPRVEKGAYNFNFQRSAIQNPHMKRPATATAYDKKDIMKYLENGLND LNLQNSIMNGKEGNQANTKTAYTQQNTNHYQPHMENGLSNFEIQSIQENASSSTAEYT RTMMPFFPLLSNLYDCPRCGKKVVKHDRDSLCADCEFR" CDS join(91313..91458,91726..92214,92260..92379,92426..92500, 92545..92685,92827..92953,93002..93295,93344..93439) /gene="CBG00059" /locus_tag="CBG_00059" /standard_name="CBG00059" /product="Protein CBG00059" /note="Predicted" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR013083" /db_xref="UniProtKB/TrEMBL:A8WM80" /protein_id="CAP21584.1" /translation="MLPNKSNQSDVPKGPIVLPEPEKRTVVKEAFPDPLPSQNRFVFQ KDKNFYFVNFGVYRQSNGSQYFQFASEIILNQKYINIMERINKECQGRKLIDPSYKMP TYGVVWQTTETKGTMTTPLELESPTPPNQKDHPETCEGCILKSELRIKNDEELRILGD YFDEAVRELEKHTETKRNLEKKLKNTMFSEKLLEEARREFQEKNKKISSLEETLREVQ SQKEGKLLEKMRNQKMLLIDAHSTRETELEKLKEIIRNQNEEICQMIETKEDLTENIR RARIEHKDLHQKNKALRIQYQTIRTERHRGEEIYMKHIDKSIEIHSGRIEELEELGHQ TLANRAKVEFERYKTAFNARLDIITANQIHLQQIDTLYLLVDVPSFKKFSSKLFDEIT AAILHNDNQRGDNGNRVAPPTLQRADDGNRVAPPNIQQDEQEKEHECPLCFASMLHGK VLACWSCKNKSHESCVRKWLQKKSTCLFCRIKWVDPVDFPPLSGS" CDS join(93701..94056,94102..94221,94267..94341,94484..94594, 94739..94820,95272..95465,95512..95643,95689..96357, 96404..96523,96566..96640,96687..96804) /gene="CBG00060" /locus_tag="CBG_00060" /standard_name="CBG00060" /product="Protein CBG00060" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WM81" /protein_id="CAP21585.1" /translation="MPPKKNKKNKTPSNEPKPTSENSKVTVESGNGQLVRDTEKTPEK CVDCLEKQKFFKKNEEKLKRMKDSISSFKVDINRLKDYNSKREIEVENWIAKSEELKK IQNECSEQNETIQYYENMLNDMEAEEIIFEMSSLKLENDRLERQLEPKDHELEALKEQ IRKNSERITTMTQGYELQLKTFESIFRFLKDTVQKLRKKASLRKRQITEKLRISKLSV TSNLSNENHIMSEDSAALKSQIEIRENNPRGNNTMTRKKKSKAQKSSPKTDANTALQP TSEQILKTAASSKSANHFTDEEKKSAMTRFRDMEHTLISDAYCQLFDGTKEGNCIYMD IPIKVTDQFKKSLEETIQLFKQIKMSDFQIPFEVEIRPKMSRREILKMYGIFLSAVAK CISCFERKDCPDNHNYDCLSMLSLMGTMYNFFVAGVDIQSPRTSSISDHSFKLIEVVG NGTRGRSAVHHRSQHSTPFSQHVLYRMLETPILQNQAEQKNGKTEEQTVTPQEAVCEK CSKTEAKYEMQKTELKKTQQEIETVKKQLENAKLRNSSLRKEEMTLKKKAEKMENLQR DCNEHAETIRFYENSMNDVGGDFVLDDIQMLSEGVQKLSENNNQRMANLNHLQQEIAE QQQGILALTQQNESLRENYHSVKNKMEQAENEKIQLQQKRTSLLRNSGALFTSQNGNA N" CDS join(98769..98912,99290..99376) /gene="CBG00061" /locus_tag="CBG_00061" /standard_name="CBG00061" /product="Protein CBG00061" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WM82" /protein_id="CAP21586.1" /translation="MTHEVLEKLYEKIDKELGEDHVQNLVKNLMATENQEETLQNLIE LHKQCCSVFLNTSSTSTTRNRPASTKKKIMKK" CDS complement(join(99568..99693,99742..99845,99970..100076, 100409..100509,100586..100654,100935..100946)) /gene="CBG00062" /locus_tag="CBG_00062" /standard_name="CBG00062" /product="Protein CBG00062" /note="contains similarity to Pfam domain PF08768 Domain of unknown function (DUF1794) contains similarity to Interpro domain IPR014878 (Domain of unknown function DUF1794)" /note="Predicted" /db_xref="InterPro:IPR012674" /db_xref="InterPro:IPR014878" /db_xref="UniProtKB/TrEMBL:A8WM83" /protein_id="CAP21587.2" /translation="MKNTVLNEHNQKLEWIVGKWRSEFSGKIFWPTVPTMTFGEELVI NEAPIAKSANVQFLNFSARAWSHSTKDHFHDEWGFLTVDPVGNATLMTTGNNGFTTYE TGTVSPNKLVLTLKDIGRISFSRDLPVEDLRRTFIRHDDRYMEQVIEMRTATHPKVGY LEHTRVVYTKLK" tRNA complement(102575..102647) /gene="CBG28793" /locus_tag="CBG_28793" /standard_name="CBG28793" /product="RNA transcript CBG28793" /note="C. briggsae predicted tRNA" CDS join(127337..127468,128200..128359,128807..128911, 128961..129247,129296..129388,129437..129556, 129830..129930,130101..130223,130458..130620, 131085..131249,131367..131471,132730..132832, 136185..136339,137671..137745,138372..138669, 138719..138838,139128..139232,140803..140873, 141155..141206,141299..141411,142129..142428, 142510..142794,143055..143195,143362..143454, 144509..144785,144833..144923,144973..145033, 145225..145501,145548..145679,145727..145815) /gene="Cbr-gei-3" /locus_tag="CBG_00068" /standard_name="CBG00068" /product="Protein CBR-GEI-3" /note="C. briggsae CBR-GEI-3 protein; contains similarity to Pfam domain PF00505 HMG (high mobility group) box contains similarity to Interpro domain IPR000910 (High mobility group, HMG1/HMG2)" /note="Predicted" /db_xref="GOA:A8WM85" /db_xref="InterPro:IPR009071" /db_xref="InterPro:IPR032147" /db_xref="InterPro:IPR036910" /db_xref="UniProtKB/TrEMBL:A8WM85" /protein_id="CAP21589.2" /translation="MIAKCCSDQKDVSFKIQKSTIPGSLHIVLKIISMENQEGGSSQQ KILTYSVASEESILQIAAIPSLLHQQTLPSAAATAYRSHASESQDELSPTNSSQAPTP AGPISAFRFSSAFFNPDILRNLNIQKSSPPNQPTEDVTPPQASQSSSDTPTEPPPPHT VPSTSRPIVIHIAHPIPLALNNELLSNSNSAVVLGDWIGCRVLARVPPGVYQTGYVKQ SSNNRNVLVQLDDGREARYENIIHEFNLTLVIADQAPTIAELTQVNANPLLAVRLPLE RSESLYRTAQLVKPCVEKDAKYLVRVTGAPYASLVSRANIRLLRPPWYEDLMQKTSGT STNPSSKSENGGRRISRENTSLLMTLQQQRSQYFQNVPSVSSPTSSNQVVALSPPAGT VTIIDPTTQPGSSNRESSSKTVSVDSDEEIPGSSNQDQSAEPSPNPAAPRSLFVNPSQ DSEIFEGDSEGQTTSVFQNITAPVCATKAMLDQQRFKKGEIVTTQCGIRKKFNGKQWR RLCSKEGCNKESQRRGYCSRHLSLKSKPPHGHHLERGSPGNSKSDLFHPESSVFLQSP SSSRVPTTVNSTAFSGKINPLSAPSTLLSDKNLPPHFSIERAQQIQQQLMQLGNVRFE NQFQQIQQLLMQQVPPGRRPDLPPMTQANNVFCPPLSLPNTSGLFNLNPALLSQLTAP LIQQHAQALLQQHMTAQNNQVNNNNIKQEIKEEEPDEDDDDIIGSDNVSYCQKTEERS DDDDDESSGGGGGGLASTGSTNPNGSSSNFAIHSAPTGQSNVAAPEDHNRTQKSNSRD SSAELTGYDMSDVLSVETNSAGPPSLPSQPSSASIGSSVNSAFRSPVKIEPKDDYEQL PIKEMIEVKREVFLKAKERRRSKTTTVIPRVRRPMNAFMLFSKRHRPLVHQENPNKDN RTVSKVLGQMWYSLTPAEKAEYHSLALLIKQAHYKANPDWRWSTKEKKKAKSESLHST PIAVTPQKNKIFDFDFRQSDDLAKSFVDGTAMLSPMTPMTPGASVFRHLSSSRDPLQP APSCFDFASLLSPSLSATSANTPSFSGSPALSSFSLDFERFRQGTNGRYPNVFNPAMM SSLVNSSTPLLPMYGSTPTADTSSFYSPTASAFRVLNPTISSLIGGFSSADSVTSPLL NITPTMTMKLPRHHPNFANETPLVAPDAEVVAAALPSAPSSAPAAEPEPVPAAPVEEP VAVPTPSLLPTIVRPTPIPTAQFLAPTTPAFILQPTPAQLGMKRNKRPRPLEIDTDEG LSAWKMFKRDDKQMDKVLDGVGFTTRFAQLPEFTPKIYSEIPSSPNLPTAAFKTPGEG TFFFGANFNAEAIAKGESLTPLSASTPVTPAVKSVPTTPMFGERSSMKKLLEERRKLV ADFLREEGLFPDNDVIFKFQEDHEDVFPSRMALILKIREVRQRKMATNQGPLNCNSNL DTIIAAIFDKYPLDASCYTPTVNEITV" CDS complement(join(146983..147477,147521..147655)) /gene="Cbr-abf-6" /locus_tag="CBG_00069" /standard_name="CBG00069" /product="Protein CBR-ABF-6" /note="C. briggsae CBR-ABF-6 protein ;" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WM86" /protein_id="CAP21590.1" /translation="MIRNGFLVLFCLHLSTLVSSVTICSSSSILSTFTDPLCTSWCKV RLCSSGSCRSVLSGNDPTCECESCTFGSWFGGSSDSNSNQPVTGQVYAAGSGGEMTTQ NYRDSQYGYNNGYNNNNNNGYNNGYGSNGYNNGYNNGYGNNGYNNNNRAPVTAGYGNA NGNFNSNQQYADQQYYNRNNQYGSSVPAGYGNAGQSNYASGYQNLKKRR" CDS complement(join(149241..149498,149572..149721)) /gene="Cbr-abf-5" /locus_tag="CBG_00070" /standard_name="CBG00070" /product="Protein CBR-ABF-5" /note="C. briggsae CBR-ABF-5 protein ;" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WM87" /protein_id="CAP21591.1" /translation="MHYSCIFLCTVILFIIPDNSESVCVTKRTDWGQFGSFFTDPLCD VWCRMRRCGKGECRENPTTTNTANCVCEKCYRDNNGNVIFPEDDGFYQQSRLNFDNPS TSSSSSSFNGGTMNQRNQDNLYPSQNSYDYDRN" CDS complement(join(150181..150456,150502..150696, 150738..150804,150853..150987,151035..151113, 151158..151242,152208..152390)) /gene="Cbr-str-123" /locus_tag="CBG_00071" /standard_name="CBG00071" /product="Protein CBR-STR-123" /note="C. briggsae CBR-STR-123 protein; contains similarity to Pfam domains PF10326 (Serpentine type 7TM GPCR chemoreceptor Str) , PF10319 (Serpentine type 7TM GPCR chemoreceptor Srj) , PF10327 (Serpentine type 7TM GPCR chemoreceptor Sri) , PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) , PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd) contains similarity to Interpro domains IPR019423 (7TM GPCR, serpentine receptor class j (Srj)), IPR019422 (7TM GPCR, serpentine receptor class h (Srh)), IPR019421 (7TM GPCR, serpentine receptor class d (Srd)), IPR019428 (7TM GPCR, serpentine receptor class r (Str)), IPR019429 (7TM GPCR, serpentine chemoreceptor class i (Sri))" /note="Predicted" /db_xref="GOA:A8WM88" /db_xref="InterPro:IPR019428" /db_xref="UniProtKB/TrEMBL:A8WM88" /protein_id="CAP21592.2" /translation="MEQIVESLQYFGFLGSLVLNSFLLFLLHTRAHRNFGKYRILMIV FCLFAIVYSLVEVLTLPVMFVKGRSLCVCSNGPLRLYRPIGVPLTSIYCGSFGMCISL LTLHFFYRYVAVCKPDKMRYFNGKHIFLTFSPSLFIFVTWSMTTYWPMAPDEMREIHY HDVLMKTFQTNSFEASFVAMMFQDPQTSTWLPSQLLSCAYMSFLMSVCFSVIVFCGYQ ALKQMRSHASHMSSKTKELNKQLFMTLGIQTLLPVFTMYIPVGCLMILPMFGIELGAA ANNAAAFLGLYPALDPLVAILLIKDFRNFVFCKSVTSTYASAVSNTAPPSKILQASRN QSQNK" CDS complement(join(<152917..153168,153213..153486, 156026..156160,156208..156286,156331..156415, 156465..156653)) /gene="Cbr-str-124" /locus_tag="CBG_00072" /standard_name="CBG00072" /product="Protein CBR-STR-124" /note="C. briggsae CBR-STR-124 protein; contains similarity to Pfam domains PF10326 (Serpentine type 7TM GPCR chemoreceptor Str) , PF10319 (Serpentine type 7TM GPCR chemoreceptor Srj) , PF10327 (Serpentine type 7TM GPCR chemoreceptor Sri) , PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) , PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd) contains similarity to Interpro domains IPR019423 (7TM GPCR, serpentine receptor class j (Srj)), IPR019422 (7TM GPCR, serpentine receptor class h (Srh)), IPR019421 (7TM GPCR, serpentine receptor class d (Srd)), IPR019428 (7TM GPCR, serpentine receptor class r (Str)), IPR019429 (7TM GPCR, serpentine chemoreceptor class i (Sri))" /note="Predicted" /db_xref="GOA:A8WM89" /db_xref="InterPro:IPR019428" /db_xref="UniProtKB/TrEMBL:A8WM89" /protein_id="CAP21593.1" /translation="MDADKLIEYIQYGGFVSSQLINALLLYLLCFQASNNFGRYRILM IVFSIFAMIYSLIEVVTFPVMMCKGRSLCVCSNGPFTLYRSIGVPLLSIYCGSFGMCI SLLALHFFYRYIAICKPEKLYYFEGKQIISTLSPCFIIFVIWSLLVYFFMDVTEEKER IYHDVLFRSYNVDSHKVSFISMLYKSPATETSPEHWNFDQLVPFFGCCFIMDSCFFAI IYYGSKAFLQMKSCGTEMSKKTKELNRQLFLTLGIQTLLPLITMYVPVGCFIILPIFG VELGVEANKTGAFLGIYPALDPLIAILLIKDFRNYVFCQKRTLAKVSTTSGIASKITS TFQA" CDS complement(join(157260..157570,157621..158083, 158141..158688,158740..159115,159232..159484, 159559..159680,160241..160397,160822..160928, 160975..161046)) /gene="Cbr-alh-13" /locus_tag="CBG_00074" /standard_name="CBG00074" /product="Protein CBR-ALH-13" /note="C. briggsae CBR-ALH-13 protein; contains similarity to Pfam domains PF00696 (Amino acid kinase family) , PF00171 (Aldehyde dehydrogenase family) contains similarity to Interpro domains IPR001057 (Glutamate/acetylglutamate kinase), IPR019797 (Glutamate 5-kinase, conserved site), IPR001048 (Aspartate/glutamate/uridylate kinase), IPR020593 (Gamma-glutamyl phosphate reductase GPR, conserved site), IPR005766 (Delta l-pyrroline-5-carboxylate synthetase), IPR000965 (Gamma-glutamyl phosphate reductase GPR), IPR015590 (Aldehyde dehydrogenase domain), IPR005715 (Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WM90" /db_xref="InterPro:IPR000965" /db_xref="InterPro:IPR001048" /db_xref="InterPro:IPR001057" /db_xref="InterPro:IPR005715" /db_xref="InterPro:IPR005766" /db_xref="InterPro:IPR015590" /db_xref="InterPro:IPR016161" /db_xref="InterPro:IPR016162" /db_xref="InterPro:IPR016163" /db_xref="InterPro:IPR019797" /db_xref="InterPro:IPR020593" /db_xref="InterPro:IPR036393" /db_xref="InterPro:IPR041744" /db_xref="UniProtKB/TrEMBL:A8WM90" /protein_id="CAP21594.2" /translation="MFRVTRCLRIPFRNSHVNILRPSQVELIKTRSSQLAPYEKVSPI TAVGATPVGDANGNYCTKTRQKHPLISTRNDLKKAQRVVVKLGSAVITREDECGLALG RLASIVEQVSVSELQQSGRQMLIVSSGAVAFGRQKLRQELVMSMSMRQTLRGPSGMTA DKRACAASGMPGLMSLYEQLFQQYGITVAQVLLTKPDIDDDQRRKNLQATIESLLSLN IIPIVNANDAVAPDPKLNMHISDNDSLAARLSAEIEAELLIILSNVNGVYTGPPDLEG SRLLHTYVPSENSGVTFGANSKFGTGGMESKVTACVNALQNGVTTVITNGLAQDAITD AVAGKKIGTMFCHTKGYEGPPIEEVAEKCRDAGRQLAALSNKERGAMVRHLAALLVDK EKYIIEANKTDLANAKSSGIDPQLLNRLKMTPEKIQDLHAGLNTIADSAETLVGRVLK KVKVSEGLFLEQVTVPIGSLMVIFESRPDCLPQVASLAMASGNALLLKGGKEAEESNK ALHALVQEALGTHGFEMRDAVTLVRSREDVADLLQLKDLIDLVIPRGSSDLVRSMQEK SKGIPVLGHAEGVCHVYIDKDCDEQKAIQIVRDSKCDYPSACNAAETILIHKDLATAP FFDALCSMFKAEGVKLHAGPKLAALLKFAPPPAESMSFEYGSLECTLEVVDNVEEAVA HIIRYGSGHTESIITENTNTAEHFLKHVDSACAFHNASTRFADGYRFGLGAEVGISTG RIHARGPVGVEGLLTTKWLLRGEGHMVEDFKNGKYNYLHENLNPSEVYRALEATGELK KATA" CDS join(171799..171881,172751..172934,173727..173873, 173922..174023,174076..174162,174210..174275) /gene="CBG00075" /locus_tag="CBG_00075" /standard_name="CBG00075" /product="Protein CBG00075" /note="contains similarity to Pfam domain PF06083 Interleukin-17 contains similarity to Interpro domain IPR010345 (Interleukin-17, metazoa)" /note="Predicted" /db_xref="GOA:A8WM91" /db_xref="InterPro:IPR010345" /db_xref="InterPro:IPR029034" /db_xref="UniProtKB/TrEMBL:A8WM91" /protein_id="CAP21595.1" /translation="MPKSPHRTNFPSLYPLLIVLSHFALASHAWRIRRDLDSDEEDMI VTDECYNKYNEENHFKVFSNYLNRKNSSHYSPIAPSFQQALLTLQQTKGLRHGEQITK SSSKCNSRKQDQISADTPLRDRALCKFEYVLNYNPKRLPAALTEVKCSCPRPNAKLVG KRIFECEHLRYQVRVLMWDDGCNTFREAVETISLACIPVIQANVNADGDDDFVYTIKA EIPI" CDS complement(join(175856..175969,176018..176169, 176464..176596,176644..176769,176813..177042, 177089..177236,177283..177412,177772..177869, 177913..177966)) /gene="Cbr-cept-1" /locus_tag="CBG_00076" /standard_name="CBG00076" /product="Protein CBR-CEPT-1" /note="C. briggsae CBR-CEPT-1 protein; contains similarity to Pfam domain PF01066 CDP-alcohol phosphatidyltransferase contains similarity to Interpro domains IPR000462 (CDP-alcohol phosphatidyltransferase), IPR014472 (Choline/ethanolamine phosphotransferase)" /note="Predicted" /db_xref="GOA:A8WM92" /db_xref="InterPro:IPR000462" /db_xref="InterPro:IPR014472" /db_xref="UniProtKB/TrEMBL:A8WM92" /protein_id="CAP21596.1" /translation="MTSTISCKACNFGQKYIEADCLLSDQELKRLREHKYSAVDNSWL DELCMKRWWEFVITLCPMWIAPNLITWIGLVINLITVLILSSFSYSATEPAPSWAYLQ AALGLFFYQTLDAIDGKQARRTGSSSPLGELFDHGCDSMTQVFVTLNICYAMSLGTVP YGVLIVSVISVVMFYCAHWSTYCTGQLRFSKFDVTEAQMSVISVLLFTALFGNGVWET HIAFGYTLKYFVISSSFLVSLYQIWGYVHVIFSGGVGKNGSTIAGTSVIFPLFPLLMV VVPFIMIYNKTDSTVFVDHITLFSLCFGAVGAKATNRLVIAHMSKSELRLWDWIYVGP LALMLNQYYNYVFDEYILLWIATIYCYASLFIYCTVVCRQFCDFLNIYIFVLGPRNSK SQ" CDS join(183406..183611,183659..183811,183870..183996, 184054..184187,184236..184407,184456..185708, 185752..186196,186240..186844,186888..187638, 187686..187886) /gene="CBG00078" /locus_tag="CBG_00078" /standard_name="CBG00078" /product="Protein CBG00078" /note="contains similarity to Pfam domains PF00664 (ABC transporter transmembrane region) (2), PF00005 (ABC transporter) (2)contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR001140 (ABC transporter, transmembrane domain), IPR003593 (ATPase, AAA+ type, core), IPR017871 (ABC transporter, conserved site)" /note="Predicted" /db_xref="GOA:A8WM93" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011527" /db_xref="InterPro:IPR017871" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR036640" /db_xref="InterPro:IPR039421" /db_xref="UniProtKB/TrEMBL:A8WM93" /protein_id="CAP21597.2" /translation="MFPVADPPRAGPENTGKISRRSTIRAAPALAVSEPKPTSAPIEF IDDDEIRKDYQPSCFDRFVDYILCRGDVAKQTYESRPVSIFGLFRYGKAFDHFLLFIG IICAIISGISQPVLTIIAGRVTNALLVYAPHTKQFRNKATENVYIFLGIGIFVTITNY IQYMCFQHCCSRIMAQMRHRYVYSVLRQNAGWFDKNHSGTIATKLNDSMERIREGIGD KLGVLIRGVAMLLASIVVAYIYEWRLACMMLGVAPTCVGCMSLMARQMTATTVKELGG VEKAGSIAEESLMGVRTVQAFNGQEEMVERYRVELNKGRKFAIWKGFWSGLYGGLFFF WLFAFQGCGFLYGAYLLKIGIITSPGDVFIIVMAMLLGSYFLGLISPHLMVLLNARVA AASIYETIERVPKIDPYSKKGRFLDKVIGRVKFENVHFRYPTRKDAKILNGLNLTIEP GTSVALVGHSGCGKSTSVGLLTRLYEPETGNVTIDGTDVRELNIDYLRNVVGIVQQEP ILFNDTIHNNLLLGNPNAKREKMIEVCKMANAHDFIEKMPKGYDTLIGDGGVQLSGGQ KQRVAIARTLIRDPKVLLLDEATSALDAQSESVVQSALNNASKGRTTIMIAHRLSTIR EADMIVFFEKGVIVEAGNHAELVRLEGRYYDLVKAQAFKPDDNPISQYDEIAEDIDLG PSATAIHSRQSSFTSSIRSRISGAEAFRRGTLGADSFAGGRSSARADAENAAFAEEVA KVMEQDGQISAGFLDIFKNAHGNYTVMLLGFVTGLIRGLELTAFALLFGWVFEGFQYL TVDNGKMMHRMAMAVIAYGCSGFGCFVSQFLSSVFFAIVSENLALRFRVMSFRNLLYQ DASFFDNPAHAPGKLITRLATDAPNCKTVVDSRMLQVLYALSAIIANIAIAFIYCWYL AILGTALIILLAVTMCGLAYKISLLNMKQIQDDEAGRIAIEIIENVKTIQLLTRCDHF FERYQKSSKSQKRSELKKGLIEAVNYTITQSFMYYMMCFCFALGIRLIYQGNKSSQDV FQGNIAMLLTAMGVMNSAQYFPEFVKAKTASGLLFNIIYRKPRTGDLMEGTCPEVRGN ILFEDVKFSYPQRPHQPIMKGLQWTALRGQTVALVGPSGSGKSTCIGMLERFYDVTGG VLRIDGQDIRGLSLFHLRTQMALVGQEPRLFAGTIKENICLGLENVRNLIHMSNKNIY VTNVQVSMEKINHALELANANRFLSNLPAGIETDVGEKGSKLSGGQKQRIAIARALVR DPKILLLDEATSALDSESEKAVQEALDRAREGRTCITIAHRLSSIQNSDVIVYIENGR VQEAGNHKQLMAKKGKYYELIQKQDLGI" CDS complement(188097..188165) /gene="CBG27858" /locus_tag="CBG_27858" /standard_name="CBG27858" /product="Protein CBG27858" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEF3" /protein_id="CAR98283.1" /translation="MLILVKHGEREKEQMVWHLVLC" CDS join(189924..189992,190045..190254,190278..190388, 190452..190472,190527..190885,190939..192357, 192406..192829,192878..194179,194230..194430) /gene="Cbr-pgp-14" /locus_tag="CBG_00079" /standard_name="CBG00079" /product="Protein CBR-PGP-14" /note="C. briggsae CBR-PGP-14 protein; contains similarity to Pfam domains PF00664 (ABC transporter transmembrane region) (2), PF00005 (ABC transporter) (2)contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR001140 (ABC transporter, transmembrane domain), IPR003593 (ATPase, AAA+ type, core), IPR017871 (ABC transporter, conserved site)" /note="Predicted" /db_xref="GOA:A8WM94" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011527" /db_xref="InterPro:IPR017871" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR036640" /db_xref="InterPro:IPR039421" /db_xref="UniProtKB/TrEMBL:A8WM94" /protein_id="CAP21598.2" /translation="MAPKDDPDNRGFDDQRRPSQRSTVLAIPALAVNDPKADPKIASD LPANYVDDDDDAPKLYTPSLFEKILNYLLCRGDIANQQLEAQPVSIPGLWVPMFVYHA LLTLTIFKQVSKFCRILSTSARRTNTTRRSKTYAIFRYGKRFDYLLLFIGTICAIISG VSQPIMALVSGRVTNALLVYPPTSKQFRNKANENVYIFLGIGIFISITNWIQYMCFQH CCSRVMAQMRHRFVYSVLRQNAGWFDKNHSGTITTKLNDSMERIREGIGDKLGVLLRG FAMLIAAIVVAYIYEWRLASMMLGVAPVCCICMSLLARQMTSTTIKELIGVGKAGSIA EESLMGVRTVQAFNGQEEMVGRYQTELEKGRRFAVWKGFWSGFFGGLFFLCLFSFLGT GMLYGAYLLKVGIIGSPGDVFIVVMSMLLGAYFLGLISPHMMVLLNARVSAATIYQTI DRVPKIDPYSKAGKRLPNVVGRVKFENVHFRYPSRKEAKILNGLNLTVEPGTSVALVG HSGCGKSTSVGLLTRLYEPEAGNVTIDGTDVRELNIDWLRNVVGIVQQEPILFNDTIH NNLLIGNPGATREKMIEVCKMANAHDFIEKMPKGYDTLIGDGGVQLSGGQKQRVAIAR TLIRDPKILLLDEATSALDAQSESVVQSALNNAAKGRTTIMIAHRLSTIREADKIVFF EKGVIVEAGNHEELVHLGGRYFDLVKAQQFKADPEATEEFEEEEIDLDDNSRSSRRSS MTSARSGSEAFQRGNSLNDSFSGSRRSARADAENDAFAAHEAEVMAQDGQITAGYLDI FKNAKGNYIYMFLGTVFALIRGLELPALALIFGWVFEGFTFVPYGGRMMHRMAMAVIA FASVGVGVWISQVASSVLFAIVSENLSLRFRVQSFRNLLYQDASYFDNPAHAPGKLIT RLASDAPNIKAVVDARMLQVIYALAAIIANIVIAFIYCWQVAILGTSLILLLAFVMIG LAYKISLMNIEQIKNDEAGRTAIEIIENVKTIQLLTRCELFFDHYQTSSKQQKRSELK KGMIEAINYSITQSFMYFMMCFTYAVGIRVIYDGDKSSDVTFKGIISMMLGAVAVMNS AQYFPEFVKAKTAAGLLFNIIYRKPRTGDLMEGDRPEIRGNILFENVKFSYPQRPLQP IMKGLQWTALRGQTVALVGPSGSGKSTNIGMLERFYDVTGGVLRIDGQDIRNLSLYHL RTQMALVGQEPRLFAGSIRENVCLGLKDVPLEKINKALELANANRFLANLPAGIDTDV GEKGGQLSGGQKQRIAIARALVRDPKILLLDEATSALDSESERAVQEALDRAREGRTC ITIAHRLSSIQNSDLIVYIDKGKVQEAGNHAQLMQKKGRYYKLIKKQDLAV" CDS complement(join(194853..195365,195431..195691)) /gene="CBG27859" /locus_tag="CBG_27859" /standard_name="CBG27859" /product="Protein CBG27859" /note="Predicted" /db_xref="GOA:B6IEF4" /db_xref="UniProtKB/TrEMBL:B6IEF4" /protein_id="CAR98284.1" /translation="MGASTDPSWVSFLDPYVWLDYFHILGWYACSPFVWLGIYTWIIW RRVEARRKIGRKTFLFAKTVLPIVFTVFCASGHLHLSLDHPIKEFLLYVFAISVHILI FVGILIIQPAKEKLEHRNSDLWIIHYLILITSWCLVQWFLYFYFPPVNIPFEMDDGGK RFAEVLTCALSLSIPALVLVLIAESVLCFRAPCLVYKKDGVDTGGFFLIHDEWLEIVR ESYEVNVPVNPKRKIIVSAAEGPRRTFRNKKNKKHKQKK" CDS complement(join(195903..196166,196402..196569)) /gene="CBG27860" /locus_tag="CBG_27860" /standard_name="CBG27860" /product="Protein CBG27860" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEF5" /protein_id="CAR98285.1" /translation="MERYLQNEAIRAQELNFWSEVDGVQLLVGSVRMVFVFEKCFFFV PNRLPNTLFFTLDLLFFNAPICRLFVSASTIERTVILLLVMVQPDACIRISLTSEILI PKNGVQGGGRAGEYFNLDVPCSSSFSISIWVSKQMRFQPIH" CDS join(200900..200957,201790..202065,202111..202256, 203028..203293,203337..203885,203928..204206, 204497..204844,205648..205948) /gene="CBG00082" /locus_tag="CBG_00082" /standard_name="CBG00082" /product="Protein CBG00082" /note="Predicted" /db_xref="GOA:A8WM95" /db_xref="InterPro:IPR032675" /db_xref="UniProtKB/TrEMBL:A8WM95" /protein_id="CAP21599.2" /translation="MNLNSTNLSIQEIVEKFRTNAFLTDELKDFKIEDENFSNEIFNQ FLFEWNYHGKVFPSIVEELSQRLNVTKVVTDHIDLIPRVCEVIKSFQLKELSIGSHNS LKIFRTEDDDEYRFVKATVDIVACLKTLIEGKNGKCLKSLRIVGNHKKETFPDGWIKQ IHELCPLVEELHLPMCFFSKNDFDFLCENFRTLRCLNIAGSEYHSLRGIGQLRNLEVF HAGNAVSENKTDVSELFELQKLKDLDISGHRYHISQEVKWLLKTRGYFPLKVLNCGYN DVSLRDLYDLCQRFPSLKTIGLLGGSLIIRKVDMKNIFSGTSLQVSENIPVPRRNTEL MTIKTLPSAFRSMKYFLSRDPHSLGSFEYFRNDIYTNPSYSRIFNHIGSVFEKLKRAK TMKQTDVCGFLEILMSEMSRKKPADWIVAPLLAHTKSLTDSRFFWKCVDDTRFVPAIL HVLDRTPLEIETIAAESFAIHNVLEILNHYCNFFPKSRFTDDIVERTAHVFCRCEKVG KDRIYTKCLNIFQLSMCNVPRDLALNLNEGQEIQSQCMKLMDKIFDRDIVKRFRWMIV GFMKINECEEARAIDLQRRFMNEFCRRMRLGVENGDNDITLRVRNFSELQFLLAMNVK AVDIFFRKTEEACIHVMNLINYGSTFSKRYGISLLVELYHHAEKRDRDLQRHIEPELQ DISGTEAFEIDCQNNPLARLEYIVDIGTREQSEWASWVIENMNKGLNPDAVFDFRPRR " CDS complement(join(206261..206461,206509..207447, 207492..207854,207903..208105,208153..208394, 208439..209688,209731..209902,209951..210084, 210132..210406,210452..210677)) /gene="Cbr-pgp-13" /locus_tag="CBG_00083" /standard_name="CBG00083" /product="Protein CBR-PGP-13" /note="C. briggsae CBR-PGP-13 protein; contains similarity to Pfam domains PF00664 (ABC transporter transmembrane region) (2), PF00005 (ABC transporter) (2)contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR001140 (ABC transporter, transmembrane domain), IPR003593 (ATPase, AAA+ type, core), IPR017871 (ABC transporter, conserved site)" /note="Predicted" /db_xref="GOA:A8WM96" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011527" /db_xref="InterPro:IPR017871" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR036640" /db_xref="InterPro:IPR039421" /db_xref="UniProtKB/TrEMBL:A8WM96" /protein_id="CAP21600.2" /translation="MDDKEPKSSISKTSSYDDDDDEKVEYFPSVFEKAVNFLLCRLVI ISHFQRIVKFFRCDLSSQVLEFKPVSLLQLVFPLRHTVRLHSSDNWRRYFHHLRRFST GSCHHFVSYTFKELLKFKIQNFRGRLTNVLLVVDPLSKEFKNKAMENVYIFLGLGIFV SINDFCQYMCFQRVCSRMMTQMRNRYISSILRQNAGWFDKNLSGTITTRLNDNMERIQ DGVGDKLGVLIRGISMVLTSVIISLVYEWRLALMMVGLIPVSTICMTLLSRFLEKSTG EELEKVGIAGAIAEESLMGVRTIQAFNGQEEMVAKYEKHLNSGKRHAIIGGFWSGFFG GMFFFWLLAFMGCGILYGGYLLKVGIIKSPGDVFIIIMAMLLGAYFLGLISPHLMVLL NARVAAASIYKTIDRVPKIDPYSKAGKKLDRVVGKVTFRNVHFRYPTRKEAKVLNGLD LTVEPGTSVALVGHSGCGKSTSVGLLTRLYEPEDGSVQIDGVDVRDLNMDWLRNIVGI VQQEPILFNDTIHNNLLIGNPDATREKMIEVCKMANAHDFIKKMPKGYDTLIGDGGVQ LSGGQKQRVAIARTLIRDPKILLLDEATSALDAQSESVVQSALNNAARGRTTIMIAHR LSTIREADKIVFFEKGVIVEAGNHGELVALGGRYYNLVKAQQFKQDPEDIELEAEQED QFDEFEKPTMFTRQVSTRSSRSSGRSGSDEFRRGTLANHSFDRFRKPSHVPTAEDEAF ALKVKETMEKDEEVTAGYLDIFKNAHGNYGYMFIGLVAALIRGLDLPAFALLLSWVFE GFEFVPYGGKMMHRFVMSVIAHCGVGLGIWFFQTLSTVMFAIVSENLGVRFRVDAFRN LLYQDSAYFDNPAHAPGSLITRLAADPPSVKAVVDGRMMQVIYAFSAVVACVTIGFIY CWQVAILGTSLIFFLGFVMCGLAFKITILAVEHMQNDDAGKVAIEIIENVKTIQLLTR TKRFLNSYENESKKRKTTELRKSVFEAINYSITQNFMYYMSCFCFALAIRVINEGDQP VDKTFRSLMAMMLCCEGIILSAQFFPQFVGAKSAAGQMFNLIYRKPQTGDVKTGSQPE IRGNILFENVKFSYPQRPHQPVMKTLQWTALRGQTVAIVGPSGSGKSTCISMLERFYD VTGGALRIDGQDIRTMSLYHLRTQMALVGQEPRLFVGTIRENICLGLKDVPLEKINQA LELANANRFLGNLPAGIDTEVGERGGQLSGGQKQRIAIARALVRDPKILLLDEATSAL DSESEKAVQEALDRAREGRTCITIAHRLSSIQNSDLIVYIDDGRVQEAGTHNELMHMK GKYFELIKKQDLAI" CDS 212215..212373 /gene="CBG27861" /locus_tag="CBG_27861" /standard_name="CBG27861" /product="Protein CBG27861" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEF6" /protein_id="CAR98286.1" /translation="MSCTMSCFGKLIVCLNPNASKGKEYIRWVIFITKEFTNTIRVVI VRYWDRKY" CDS 213187..213429 /gene="CBG27862" /locus_tag="CBG_27862" /standard_name="CBG27862" /product="Protein CBG27862" /note="Predicted" /db_xref="GOA:B6IEF7" /db_xref="UniProtKB/TrEMBL:B6IEF7" /protein_id="CAR98287.1" /translation="MFTVLILDFLFSTFSKKFQSFFLVYYIIILFSVAELFVFISSLV SCLVQFAAYVSSSKFLLKFPISTKRLINIQFQVQTV" CDS complement(join(213515..213535,213926..214102, 214238..214370,214629..214792)) /gene="CBG27863" /locus_tag="CBG_27863" /standard_name="CBG27863" /product="Protein CBG27863" /note="Predicted" /db_xref="GOA:B6IEF8" /db_xref="UniProtKB/TrEMBL:B6IEF8" /protein_id="CAR98288.1" /translation="MFEGDVPFTNVELFAIGLTMFVAHTVIGDKTQRHSSQYNSSMKL AENNPKRKKGDFLRKYGTRVVLIITHSGRNDPFLFFFFIFNDLGVLGSFIKQRKQKKH YHKSIKASIIAIKRASEQHIERSSTNLPYENRSRSSFNSSQFDEIARVMYQAAGFQIH EHHS" CDS join(216530..216753,216784..216865) /gene="CBG27864" /locus_tag="CBG_27864" /standard_name="CBG27864" /product="Protein CBG27864" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEF9" /protein_id="CAR98289.1" /translation="MANTRVVNTGGDFVRNPNLPDPEQQATTSNNRTADANRAADING GGGLSSFLNLLSCLPICGKKANTTPVESMEEGIGESFFSFVKLGYNQFIVFKNLLFL" CDS join(218116..218219,218252..218443,218582..218636) /gene="CBG27865" /locus_tag="CBG_27865" /standard_name="CBG27865" /product="Protein CBG27865" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEG0" /protein_id="CAR98290.1" /translation="MAIIIQKHFYTSHFSQKQIHLSPAIPNAHFLILCDSYLSIFGYQ KVFCILWITMAHSCFSRNFSCHPATFAEIRSDPHPALPLSRTPSPPRSSLCSQLIKTN DKTRIREKSNSMVD" CDS complement(221106..221168) /gene="CBG27866" /locus_tag="CBG_27866" /standard_name="CBG27866" /product="Protein CBG27866" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEG1" /protein_id="CAR98291.1" /translation="MNFQCFYFCCFRIKKTTDTF" CDS join(222567..222573,224024..224036,224499..224505, 224697..224952,224997..225001,225152..225388) /gene="Cbr-rgs-2" /locus_tag="CBG_00085" /standard_name="CBG00085" /product="Protein CBR-RGS-2" /note="C. briggsae CBR-RGS-2 protein; contains similarity to Pfam domain PF00615 Regulator of G protein signaling domain contains similarity to Interpro domain IPR000342 (Regulator of G protein signalling)" /note="Predicted" /db_xref="InterPro:IPR016137" /db_xref="InterPro:IPR036305" /db_xref="UniProtKB/TrEMBL:A8WM97" /protein_id="CAP21601.2" /translation="MQSSKIFATHKTCLQNLFLSEKTDNNVPHSSRVTYEVVYGWSLS FENLMKHRCKKNSKLLSLSNHLTNYFQLDKSTSPSFSKGSTLMRTYFSGRQKARIIYE DFISILSPKEVSLDSRVREIVNTNMGRPSASTFDDAQGQIYTLMQRDSYPRFLASPIY KACVANFGVQEEAV" CDS complement(join(226131..226283,226362..226382)) /gene="CBG27867" /locus_tag="CBG_27867" /standard_name="CBG27867" /product="Protein CBG27867" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEG2" /protein_id="CAR98292.1" /translation="MGQVKEHGFSGALSNKMGDPTSKKVRDTCKKRTVKKKSEEMKKY VVRTITTSFWKGF" CDS 226615..226695 /gene="CBG27868" /locus_tag="CBG_27868" /standard_name="CBG27868" /product="Protein CBG27868" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEG3" /protein_id="CAR98293.1" /translation="MEFLGIFMMIKNLTVVFCYVSDILIG" CDS 227027..227062 /gene="CBG27869" /locus_tag="CBG_27869" /standard_name="CBG27869" /product="Protein CBG27869" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEG4" /protein_id="CAR98294.1" /translation="MNEEWKEEDKK" CDS join(228882..228965,229010..229168,229215..229312, 229359..229509,229539..229672,229724..230086, 230122..230410,230464..231296,231367..231787, 231836..232198,232241..232482,232620..233364, 233414..233614) /gene="Cbr-pgp-12" /locus_tag="CBG_00086" /standard_name="CBG00086" /product="Protein CBR-PGP-12" /note="C. briggsae CBR-PGP-12 protein; contains similarity to Pfam domains PF00664 (ABC transporter transmembrane region) (2), PF09818 (Predicted ATPase of the ABC class) , PF00005 (ABC transporter) (2)contains similarity to Interpro domains IPR019195 (ABC transporter, ATPase, putative), IPR003439 (ABC transporter-like), IPR001140 (ABC transporter, transmembrane domain), IPR003593 (ATPase, AAA+ type, core), IPR017871 (ABC transporter, conserved site)" /note="Predicted" /db_xref="GOA:A8WM98" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011527" /db_xref="InterPro:IPR017871" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR036640" /db_xref="InterPro:IPR039421" /db_xref="UniProtKB/TrEMBL:A8WM98" /protein_id="CAP21602.2" /translation="MKWRKNGDAIAPTDVIGEEVGKKKQENQTVDLEDVVSIDSDEEP KFVYEPSHLEKFINYMLCRGDLAKRELSVKPVTLLGLFRFAERRDHIILLIGILLSFL SGVAQPGLGVIAGGMTNTLIVYNVTSPQFLDSALMNVYLFGGIGVVVLIINFIQVSYS NQIIYMCFQNVCIRIVTKLREEYIKSILRQNAGWFDKNHSGTLTTKLHDNMERIHEGI GDKLGVLIRGIVMFGTGIVISLFYEWRLALMMMGIGPLCCICMSLMSRVRDCFSNIHN NEVLVNVVIHIERISRRWKSWKYCRGVVDGCQNSTGVQWSGRDGWKVQYFFSSSYTAE LGKGKSYAVKKGLWGGFFGGIFLLILFTYFGGGIFYGGQLLRWKIIENPGDVFIVVFS MLIGAYFLGLISPHLMVLLNARVAAATIYEVIDRVPEIDAYSNEGQKIDKIVGRVVFE NVHFRYPTRKKAKVLNGLNLTIEPGTSVALVGHSGCGKSTSVGLLTRLYEQEDGKVMI DGHEVRNLNIDWLRKVVGIVQQEPILFSGTIHNNLLIGNPNATRDDMIRVCKMANAHE FILKMPKGYDTVIGDGGVQLSGGQKQRVAIARTLIRDPKVLLLDEATSALDAQSESVV QSALNNASKGRTTIMIAHRLSTIREADKIVFFESGVIVESGTHDELVALGGRYAALVK AQQFKEADEVDDDVEEDITARIEKQMPSRQVSYHGSCVSLASADLEIGYASAFNSFNL KQAQDDIENEDFAEEVQRVMEEDGVITSGYYDIFKNAKGNYWYLSMGTVFAIMRGSEL ALLAIMFGYVFEAFEKPDAEMARELVIIFILYGCLGLYVFITQVLSSTLFTIVAENLG LKFRVQSFKNLLYQDASFFDNPAHAPGKLITRLATDAPNVKAVVDTRMLQVIYSMTSI TINLVTGYACCWQIAVVGTVMIALFALLMISMAYKIARVNLKQIKRDEAGKIAIEIVE NVKTIQLLTSTEHFLTEYTTALELQHKSEMKKAYIQALNNAISQTFMYFAMFVCYAVG TPLMYNGIVDPNGAFRAINSMMMGSVAVMHSSHNFPEFVKAKTAAGMLFKLIYRKPKT GDVMKGNQLDIRGNILFESVKFSYPQRPLHPVMTDLHFTARNGQTVALVGPSGTGKST CIAMLERFYDVSGGALRIDGQDIKTLSLHHLRTQMALVGQEPRLFAGTIRENVCFGLK DVSLDDENQVIKIKKLQVPIEKVNQALELANASRFLANLPSGIDTEVGEKGSQLSGGQ KQRIAIARALVRDPKILLLDEATSALDSESERAVQEALDRAREGRTCITIAHRLSSIQ NSDLIVYIDQGKVQEAGNHNHLMSLRGKYYDLIKKQDLTS" CDS join(234474..234748,234795..234879,234922..235041, 235168..235470) /gene="CBG27870" /locus_tag="CBG_27870" /standard_name="CBG27870" /product="Protein CBG27870" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEG5" /protein_id="CAR98295.1" /translation="MVLFMTTKNSISYPVVNLASGMLTAADTVNRLSDIQRTLSNIEN TLTNMKKPKKKAIPVPRSEEPSLDLLMHNLTDVTIGTTLNIKLFIGGPIDLYLHSTSM YESPVNSPLVILFRPQQKTIVFNSLVADQFDIEEKRNIPMTIPNIIQLDIQLQETDIE EQVNCYAWKLFRLLKKDRTTKLTIQSKTPSTRIWWKEVMKSTILMGMSILKKIRTRRR LTKTYDHYSNSRILNSVYLRTFNNLIKYLIKILFTSHRTILV" assembly_gap 236035..237034 /estimated_length=1000 /gap_type="between scaffolds" CDS complement(join(238205..238245,238658..238760, 238788..238808)) /gene="CBG27871" /locus_tag="CBG_27871" /standard_name="CBG27871" /product="Protein CBG27871" /note="Predicted" /db_xref="GOA:B6IEG6" /db_xref="UniProtKB/TrEMBL:B6IEG6" /protein_id="CAR98296.1" /translation="MSSKNYVTMIMTSFILSVLMFLRFTWVTHSLLIASSRITCIFQN PMPENYETPN" CDS join(242221..242298,242349..243033,243081..243337) /gene="Cbr-nhr-27" /locus_tag="CBG_00089" /standard_name="CBG00089" /product="Protein CBR-NHR-27" /note="C. briggsae CBR-NHR-27 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /note="Predicted" /db_xref="GOA:A8WM99" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR013088" /db_xref="InterPro:IPR035500" /db_xref="UniProtKB/TrEMBL:A8WM99" /protein_id="CAP21603.2" /translation="MIFELASMESQFCVICGQSTSLYNYGTISCSACSSFFRRTVLAK VPIQQCPHQDACYTPENRATHSECKYCRFHKCVDVGMINTQKYTNLTKLINQLSVLDK KRSYTCANMMLPPDFRLSSIFDYEHIKLIKKTPEVRFISHDWGCVHQLASMEFIKTFQ FVKFLSLQDLQVFMKTAHFNHVIFASAMRSFGIRQGYLSFPDGSDVFPECIKRITCYN PEFLNRIRCKLMGRIIELNINPEEYLLLSAIILCNPAAVNLSVKGRTLISSYQKVYGS LLFQYCCQVNKKNGPLRFSELLTIFHAISQTHHDIGQFFLLFQMYQPNAQPIQLYQEV IDYMM" CDS complement(join(243543..243786,243837..244056, 244100..244180,244228..244387,245002..245178, 245411..245556,245606..245676,245722..245821, 245890..246088,246180..246276,248557..248760, 248806..249025,249067..249147,249193..249352, 249401..249577,250158..250303,250356..250426, 250485..250584,250666..250864,251190..251345)) /gene="Cbr-ugt-50" /locus_tag="CBG_00090" /standard_name="CBG00090" /product="Protein CBR-UGT-50" /note="C. briggsae CBR-UGT-50 protein; contains similarity to Pfam domains PF04101 (Glycosyltransferase family 28 C-terminal domain) (2), PF00201 (UDP-glucoronosyl and UDP-glucosyl transferase) (2)contains similarity to Interpro domains IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase), IPR007235 (Glycosyl transferase, family 28, C-terminal)" /note="Predicted" /db_xref="GOA:A8WMA0" /db_xref="InterPro:IPR002213" /db_xref="InterPro:IPR035595" /db_xref="UniProtKB/TrEMBL:A8WMA0" /protein_id="CAP21604.2" /translation="MRVLLYCFAVILLECFIVGSAKILVYCPSISKSHVILCAKYADV LHNAAHDTVLFIPSYSSALNNFDGAKHANVWRLHNVTHAYDAKLDSLANVMEDSHIGF LDRLTYDVDFWMEMCEDLARQHHRMQHLIDYGFDLALFNDIDPCNSAIIRSLNISKTV LLSSEAIMDKIAWDLGLPMLPSYVPSIEENPNHDRMNFLERMSNAYKYFQSLVVHYLQ ERRVLHIFRKYIADDFPPIMEMLKNVSLVFVNTDETFDIARSYSQKFVYVGMLGAENS ANETLPKKLDEYFSKGKAGSIFVSFGTVTPFRALTQQVQQSVYNAVQKLPHYHFVIKT ALDDISTAELFADVPNVDLVDWVPQSAILNHPNLKVFVSHGGMNSVLETMYHGIPMVI MPVFTDQFRNGKNVERRGAGKMVLRHLVVNETFFDVINEVLTDESYTTCAKRVSKLMK SRPFTSEERVTKWVDYVLDHETSEHFNLEINNLTLIQQYYIDILFVYTILPLFSLAKI LTYCPSISKSHVLVCAKYADALHNAGHDSVLFIPTYAEALNTFDGAKHAKVWRMLNVT AAYDTKFDSYASIMEDTHIGFLDRMLNDVYFWMDMCEDILKQFHRLQYLADYKFDIGI FNDVDPCNPAIVKALNISKTILLSTEPLMDKIAWDLGLPILPSYVPSMEENPNHDRMG FFERMSNAYKYFQSIVIHYLQDWKMANLFRNYISPDFPSIMEIIRNVSVVFVNTDEMF DITRSYSQKFVFVGMLEAEKSKNETLPEKLNEYFSKGKLGSVFVSFGTVTPFRVLPER IQLSVFNAIQKLPDYHFVVKTVIDDTTTAELFAGVPNVDLVNWVPQTAILNHPNLKMF VSHGGMNSVLETMHHGIPMVIMPVFTDQFRNGKNVERRGAGKMVLRQTVANETFYETM NEVLTDERYTKGAKRTSQLMKNRPFTPEERVSKWVDFIMTHDTSEQFHLESNSFTFIE HNQLDIFFVFILLPLITFFVYRRFLKRKVN" CDS complement(join(253910..254075,254747..254822, 254920..255327,255448..255473,255991..256301, 256612..256854,256903..257000,257046..257223, 257280..257389,257432..257708,258304..258515, 258547..258623,258641..259214,260238..260413, 260461..260630,260679..260771,260822..260990, 261043..261180,261225..261505,261599..261743, 261790..261931,262047..262188,262384..262512, 262622..262699,263018..263263,263584..263643)) /gene="Cbr-adt-1" /locus_tag="CBG_00091" /standard_name="CBG00091" /product="Protein CBR-ADT-1" /note="C. briggsae CBR-ADT-1 protein; contains similarity to Pfam domains PF00090 (Thrombospondin type 1 domain) (12), PF01421 (Reprolysin (M12B) family zinc metalloprotease) , PF01562 (Reprolysin family propeptide) contains similarity to Interpro domains IPR000884 (Thrombospondin, type 1 repeat), IPR001590 (Peptidase M12B, ADAM/reprolysin), IPR002870 (Peptidase M12B, propeptide)" /note="Predicted" /db_xref="GOA:A8WMA1" /db_xref="InterPro:IPR000884" /db_xref="InterPro:IPR001590" /db_xref="InterPro:IPR002870" /db_xref="InterPro:IPR024079" /db_xref="InterPro:IPR036383" /db_xref="InterPro:IPR041645" /db_xref="UniProtKB/TrEMBL:A8WMA1" /protein_id="CAP21605.2" /translation="MPPLFIVITFLFSTAFRISQSVHHHLNEEELKQVFGVSNKHEVS FSFTLMITYNVFQVPEYSLIETTRHPLKNGGLKMKFVAWNDTYHLNLRKNSRIVSPHI ISVIRHGDDAVTTYDGLRDYNQCHYQGEVKSHGNMKAAISDCGALMGSLVMEDHFLVL QTLPKRVHHLQKERHLVYKRSAGLLTDTENKIREEITRLQEEQESFCDTSEQLDDPAM TIPAHLHFNYTIPTSAQLDSPFIFPNMDPITLEIGLFLDSKLFEHFEREYIQDAEQHL LEFSLALINNVHVLYQQDTLTPNLDIVIVRYEMWKTQPSSLSTGVHKNGQAQSLLDAF CRYQAHMNPGTDLTDMNHWDHGVLLTGYDIYHTTTSVAGVAPVARMCDPLFACSLVEG LHLGRSFVLAHEMGHNMGMVHDGVQNQCNKGCCLMSAVNGAGKTTWSDCSVREFNAFL LQLDESGRGNCLRDASPGLISTNHLSDTRLPGQRFTADQQCSYFWGRDYRVEIPNGKA MDDICRILWCGNSGSTISTAHPALEGSWCGHNKWCHKGHCTSWNFDLPPVPIDGQWSE WGGAEKGCPIQQCAVSGSITIQAQHRDCVNPAPNNGGRTCEGANIRGIVCGATSSNCL GFTREEFGNKICSSIKFDPHKPDQQLTGEGFEPHQCLTNWKISDSTQPCRVWCHLIGS ELIRNKGQFPDGTPCGFDAYCVGGQCLALSCDNKALVEQQEDCPRLEGRSIHQWEDWS SWSECSVSCGPGGRQVRERKCSSGRKCQGVSEESRACEGVLRDCEEFGEWKDWGPCSE KCALGIQKRFRPCLTDQCASEHLQEKRPCDNVRVFFSKLLIAYAGKSQTEKDVGPTGT SGHHAPRRVVVDVDTDYESCFRKCLDFKCEGDDLEKESCNTQKCISQTWGDWLPCSVS CGIGFQIRERLCDGELCATANKQARTCNQQQCPSTFSLAVWSEWGEWTTCSATCGEGL QSRERSCRRGSCQESDAAQTRRCVNGPCDHTFLPWSEWTPCETCSSFDSRKRIAKCDG TTDNCQDKIDEETCDNACLREQHSFGPISPKRPKLITSNELRKAFGRPLLPIESITSS KWSEWGPCSVTCGSGRRVRTRDCQEENCPEQNIQHEECSLNSCLDLFIWSDWSSCSKS CGHDATQTRQKLCLFNNAECSSYAESRRCKNLPTCTSISSGNTISENSFDAPQWSEWS SWSACSCFSLTSTRRRFCQVADPTVQGFCAGSILEQIPCAPGLHTVCLYNFFQNCSPS AGGWSSWSEWSSCSKDCGDTGHQIRNRMCSEPIPSNRGAYCSGYSFDQRPCVMDNVCG EEKVNGGWTDWTSWSECTDYCRNGHRSRTRFLIYLIYIHFVPTRNLHKAVLNVLAQIL SSTHVSIRPDVTVSVFLKPHRFRPTSSFYFAPPLPLAFCTTHSRNHFPFFIPFLHAFL VRDGGWSIWSDWSPCSASCGFGVQTRDRTCSSPEPRGGQLCTGLAHQTSLCDLPACDH ESDGEWSAWNEWSGCMGNCGFGTRTRVRACVSPPASHGGQPCFGRSSEITECRQSEST CSSFITSSLLADGYFIETDQQQ" CDS join(274162..274243,274296..274396,274454..274683, 274732..274831,275517..275624,275660..275796, 275845..276014,278201..278352,278627..278743) /gene="Cbr-nhr-17" /locus_tag="CBG_00093" /standard_name="CBG00093" /product="Protein CBR-NHR-17" /note="C. briggsae CBR-NHR-17 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /note="Predicted" /db_xref="GOA:A8WMA2" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR013088" /db_xref="InterPro:IPR035500" /db_xref="UniProtKB/TrEMBL:A8WMA2" /protein_id="CAP21606.2" /translation="MLAFESPIAESSYSRQKAKDLAKKFTPGELCTVCGDVASGIHYS VAACNGCKTFFRRVVLENRTYSCKNNGDCIIDKSMRCSCRHCRYKKCIIAGMDRAELS MERRRKRKKLNGIEGLEERYETTNPLINLLLHKEKLYQKLLHSSAMTIHTSLREALDM SQIAFNDTNNKYDDRMDPKYPTNFSYWRAKILTVLVEWAKSFEASISVFSHLQPEDQK RLFIHTAFSNLVLAEAFHTPEKYNDRIVFPDGLCGFRNVAQTVSSDGVSTKTYGLTPT VVAVINDVLVPIRRMRLTKVEYVLLQAIIFFDPDCLSLTKHGSQLIAAKRRRLLHALQ DWLQQQNKHEAAGRFAEILLRICNVQKVAAFKRETLCTIETFELMQPHPFTMEISKSY PDFSYF" tRNA complement(join(276666..276702,276712..276749)) /gene="CBG28569" /locus_tag="CBG_28569" /standard_name="CBG28569" /product="RNA transcript CBG28569" /note="C. briggsae predicted tRNA" CDS complement(279253..279282) /gene="CBG27872" /locus_tag="CBG_27872" /standard_name="CBG27872" /product="Protein CBG27872" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEG7" /protein_id="CAR98297.1" /translation="MYYRSRAVL" CDS join(279422..279446,279605..279756,279834..279908) /gene="CBG00094" /locus_tag="CBG_00094" /standard_name="CBG00094" /product="Protein CBG00094" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMA3" /protein_id="CAP21607.1" /translation="MMNRQFLLVFVAICVLSQNASALRGALFRSGRSLLHRQNLNQEA VAHQTHLIQSEKRSPIVELYPVVDSGNVEPEAFPSYFRF" tRNA complement(join(281565..281601,281611..281649)) /gene="CBG28624" /locus_tag="CBG_28624" /standard_name="CBG28624" /product="RNA transcript CBG28624" /note="C. briggsae predicted tRNA" tRNA complement(join(281983..282019,282029..282067)) /gene="CBG28513" /locus_tag="CBG_28513" /standard_name="CBG28513" /product="RNA transcript CBG28513" /note="C. briggsae predicted tRNA" tRNA join(282567..282605,282615..282651) /gene="CBG29091" /locus_tag="CBG_29091" /standard_name="CBG29091" /product="RNA transcript CBG29091" /note="C. briggsae predicted tRNA" CDS complement(join(282896..283344,283387..283492, 283555..283668,283717..283803)) /gene="CBG27873" /locus_tag="CBG_27873" /standard_name="CBG27873" /product="Protein CBG27873" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEG8" /protein_id="CAR98298.1" /translation="MALSRPVWVKPVEKAFRKMMEKLEHKEDMMHYIEQVFLSHYKKE KVNTEEFENVNLATYFDINLKYTPRAVGIHWWESIGKKEEKVERYPVVHALCKFRIRP EDYGSTFTRHESWGPVTLNYGEMREHHIKVWIEKLEKRFGFDICSSDVKRFDYRRVVR DYYELSVIVNRCLKEENETLKNDILENIIHRLHATEIFLLKEVCEAHKKYGGRDADHK NSEWLHDLTIFVISAEIMYRKLRKIVFFNMPRK" CDS join(285548..285688,285735..285779,285837..285947, 286944..287084) /gene="CBG27874" /locus_tag="CBG_27874" /standard_name="CBG27874" /product="Protein CBG27874" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEG9" /protein_id="CAR98299.1" /translation="MPEYLYKGLTPCDQFDIKKEYNEIHKDLRDGCGIGNHGDTVISF KWAKTTVQLLCRTRQWLLNNPIVTSENERATRDIRRNNKDRLEYIVRMASNPYDQKEY EKCMQLLHSCLAEELIAMHHLDMAFQLNVESSNSVEVATSSRL" CDS 288396..288551 /gene="CBG27875" /locus_tag="CBG_27875" /standard_name="CBG27875" /product="Protein CBG27875" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEH0" /protein_id="CAR98300.1" /translation="MEKIKSGDLVTIPLSFHFHSQTSKMENRDSEEEYKNLIRRNENS NLESFEI" assembly_gap 291327..295113 /estimated_length=3787 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(296899..296940,297028..297060)) /gene="CBG27876" /locus_tag="CBG_27876" /standard_name="CBG27876" /product="Protein CBG27876" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEH1" /protein_id="CAR98301.1" /translation="MSIIFSIIISEHFEYTVTTLALLV" CDS complement(join(297538..297693,297737..297816, 298593..298737,298781..298911,298977..299129, 299176..299310,300071..300157,300204..300318, 300725..300868)) /gene="CBG00098" /locus_tag="CBG_00098" /standard_name="CBG00098" /product="Protein CBG00098" /note="contains similarity to Pfam domains PF00413 (Matrixin) , PF00045 (Hemopexin) (2)contains similarity to Interpro domains IPR001818 (Peptidase M10, metallopeptidase), IPR021190 (Peptidase M10A, matrix metallopeptidase), IPR018487 (Hemopexin/matrixin, repeat), IPR006026 (Peptidase, metallopeptidase)" /note="Predicted" /db_xref="GOA:A8WMA4" /db_xref="InterPro:IPR000585" /db_xref="InterPro:IPR001818" /db_xref="InterPro:IPR006026" /db_xref="InterPro:IPR018487" /db_xref="InterPro:IPR021190" /db_xref="InterPro:IPR024079" /db_xref="InterPro:IPR033739" /db_xref="InterPro:IPR036375" /db_xref="UniProtKB/TrEMBL:A8WMA4" /protein_id="CAP21608.2" /translation="MSKSSLYTKISQIIGSYWGKSIITYRLKQPSQRMSLSQQREVFA KAFAEHTRLWFVAVNDDDPQKANIDIVFAAGDHEDGEPFDGKGNILAHAFFPRYGGDV HFDEDEMWSANKSKGVDLYAVAVHEIGHSLGLKHSANHLSIMAPFYKQYTGNVMHLHQ DDIQAVKRLYGSPVKIRKRTNSNYIWRSELCTRPFLDAVTTLKNGTVLAFRGNMFFEF KTNRNQFNPKRIIKFFPFDGPLEAVTTDRHGNVYFFKKDIYWVMTKYGDMMTGYPKKI SAGLTDTPDGISAALYYHHDGKPYFFKKSYFWQYSRHGKQQKWPQLIAAIFEGKDYPP EIDAAFQLHNNASFLFYRDKYWKVSGSPMRIEPGYPRSLAKDWFNCA" CDS join(307088..307156,307514..307613,307659..307845, 307891..308029,308079..308210) /gene="CBG00099" /locus_tag="CBG_00099" /standard_name="CBG00099" /product="Protein CBG00099" /note="Predicted" /db_xref="GOA:A8WMA5" /db_xref="UniProtKB/TrEMBL:A8WMA5" /protein_id="CAP21609.1" /translation="MIYFFGIDDWLTSSGRTCNTSMKKSILCSVIFIMIFAAGIAQFF FIDHFKLVVPSIGHAVLFLFEMICFLVLINALFNERPLLFLPFVITELVRCVCLLIVI GLYIVKMFQVQGREDVRPNIVLPALHYDNEHKTVKMMVKLVFHLIFVFFVHLILAGIG YRCYQIYSYGTGRNRMNHADYRPTQPLHTVIVLEQPIEQAMYGKKPVN" CDS join(311738..311893,311943..312632) /gene="Cbr-col-182" /locus_tag="CBG_00101" /standard_name="CBG00101" /product="Protein CBR-COL-182" /note="C. briggsae CBR-COL-182 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain) , PF01391 (Collagen triple helix repeat (20 copies)) (3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /note="Predicted" /db_xref="GOA:A8WMA6" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/TrEMBL:A8WMA6" /protein_id="CAP21610.1" /translation="MSDSARIAAYGAITICTVSIAATLFYLPVFFSRIDNIRTSLAFS MEEFNTLQAEVWGDMVHLRGEMPGLKRHQVKRQAGNEQCNCDQQNLCPSGPKGRPGPD GLDGLPGTPGEQGEQGLAGIAPEAEKAKDGCRVCPPGPSGPPGYPGQPGPQGLPGNQG DQGEIGREGSPGPQGAPGDMGMMGDAGKEGEKGVPGREGVRGEKGPSGPPGLPGLVGP KGFSGNSGPPGNPGEPGPEGEQGPAGKDGAPGYDGGFGNYGEPGQPGEDAGYCKCPAR KQRKH" CDS complement(join(318210..318292,318330..318370, 318660..318700)) /gene="CBG27877" /locus_tag="CBG_27877" /standard_name="CBG27877" /product="Protein CBG27877" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEH2" /protein_id="CAR98302.1" /translation="MNGTAGEEVSRGMKHKGMLRKGGVKIYCDWKLFGGYPFSSSDYF PLFSTCFFFH" CDS 318838..319005 /gene="CBG27878" /locus_tag="CBG_27878" /standard_name="CBG27878" /product="Protein CBG27878" /note="Predicted" /db_xref="GOA:B6IEH3" /db_xref="UniProtKB/TrEMBL:B6IEH3" /protein_id="CAR98303.1" /translation="MFGLHSRRLFTQMFGVLDMSQKLYFYILNCVFFPWLLFCGQADC NVTQDFSHYKE" CDS join(320007..320096,320756..320893,321103..321259, 321309..321513,321800..321924,321972..322099, 322300..322443,322491..322818,322865..323107, 323162..323834,323881..324148) /gene="Cbr-tag-147" /locus_tag="CBG_00102" /standard_name="CBG00102" /product="Protein CBR-TAG-147" /note="C. briggsae CBR-TAG-147 protein; contains similarity to Pfam domains PF07707 (BTB And C-terminal Kelch) , PF01344 (Kelch motif) (6), PF00651 (BTB/POZ domain) (2)contains similarity to Interpro domains IPR006652 (Kelch repeat type 1), IPR013069 (BTB/POZ), IPR011705 (BTB/Kelch-associated), IPR000210 (BTB/POZ-like)" /note="Predicted" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR006652" /db_xref="InterPro:IPR011043" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR011705" /db_xref="InterPro:IPR015915" /db_xref="UniProtKB/TrEMBL:A8WMA7" /protein_id="CAP21611.2" /translation="MPLELNIDLTEERPKLSDILAFDMEKPLVKTNVLALVPKRTRSA VSMRADETDNWGQEALDEKEAYTLTLSDPSIKNELLDRLNTFRRNRNLCDTVLFVKER EIFVHKVVLAAVSPALFDMFNVENEDEKSPTSTPTTNGEAPTNGVTTNGNGVGVVANG SLSQGQKPQNQSITFYEFAQTDFECFEALVNFAYTSNLEISSKKVAELYKTAYALQMN PVIKACAGYLADNLQVSNCIGVRRQANFHNDSFLMSKVDDFITENFDSIVNDSKEFTQ LPVIQVRIIVPAEDGKVANNANNQGGLAEMALFYFQNMPHERVEHSIDMLTCKTHILY MEEDHLADCLEMDERSSVGSCDIIQDYKKSGKDRKDVAKAMTVQEPIITSVVQHRVNG AVPVRLNASRLPNMNASNESLESAGTDDSDPQDTIEARLISTHRTAPQYWVALVVLYR RLCVLSLQLTDNEELLRTKREPCPVDSQKAALLSRLISCTGKQQKPLECMGSSRCSIG ASFLNGKIFVCGGYDRGECLKSVEEYDVVQGKWRYVANMKAERGRFDCTVQGGKVYAV AGSNGNKELKSCEVYDPKADKWAPLPNLNTAKCHNGCATIDNYIYCIGGLFDQKVLKD CERFDTNTLGSEEAVWEPMTSMEQARYQAGVCTWRGLIIAAGGCDRWICMDTVEAYDP KTNTWRQLPKLRQARRGCAVAVVRDTLYVIGGHDGTQCLDTVEILDSPSSQWRVGPTL TTARGNTHAVVTAGNVIYCIGGFTGVKFLDTIELLENGKPKLSITSLLCTNVSEQIGW RNWQTCPEQILEEQEEDESSQIDNDATSTPPSSP" CDS complement(328040..328123) /gene="CBG27879" /locus_tag="CBG_27879" /standard_name="CBG27879" /product="Protein CBG27879" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEH4" /protein_id="CAR98304.1" /translation="MILHVSCVDEILLEYSNSLKAIFGVLE" tRNA complement(328557..328628) /gene="CBG28308" /locus_tag="CBG_28308" /standard_name="CBG28308" /product="RNA transcript CBG28308" /note="C. briggsae predicted tRNA" CDS complement(335513..335608) /gene="CBG27880" /locus_tag="CBG_27880" /standard_name="CBG27880" /product="Protein CBG27880" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEH5" /protein_id="CAR98305.1" /translation="MEESPTFLRMRMLRKKMGGRELIESLKEALV" CDS join(336294..336955,337123..337183,337232..337447, 337492..337800,337844..337974,338023..338152) /gene="CBG00105" /locus_tag="CBG_00105" /standard_name="CBG00105" /product="Protein CBG00105" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMA8" /protein_id="CAP21612.2" /translation="MDQNAVQEFQDAIEQAATDTVKGNKLGDMKSIIKIMEKVAINEK KEVSKDGKEVCKNKGEDFDDDNDEYEDVTEEFKDATEHFHDAKETFEGTEAKPGLGVE DGADDLENYLAEDEMEEEDDLLRDSETESNEYIGFPRIPMNNLPPDYVPDDGGVITEP EDEESDYEEHTPEKAALVLWRIGFRNHNRVMSDSIYVDEIPTPPKSRPVTSLSSFRRG EQGEIIADFFQFRHDLNEESYKNKYTILLDNYRRKYREREDSASIRSENESRVHMGTN SEVVFQGRNMAMEHLRELLGQKLRLWDSEFTSYRSAQVGEMDLSKCVHTITSHSLRVT MDSYHNIVEILNLHRPVLVTLTLECCEEYPGIFEMEQVRKCPMVRLKGPCGLTDETLL DIANVQLEANVERVTNQGLNTFFQMKLAGDIPDKLYIKLLNGNWNPQEALKDLEYVEY ESEKSFREKNGYLPPTMRNLFLASLPTKNPDVRLAVGISNSAMICCKEGYKH" CDS complement(join(338909..339437,340056..340298, 340381..340494,340539..340784,340833..340927)) /gene="CBG27881" /locus_tag="CBG_27881" /standard_name="CBG27881" /product="Protein CBG27881" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEH6" /protein_id="CAR98306.1" /translation="MSHKEPKKEKFIETDGSGNESNVTETGDEFLKKMKKALEETRKD SDSVFPATTESRRYVFVYLVSIFENVSRFVLFSPSNEKKLLIDQETFNSQMKKLSFLV KKSSIDYSCNNGSKQCSSASPPGFFSYPSSDESSGEENESYTEDSESETESARIAPIY PAPDRPPGILTTAFQSEESNAPSSSSPEDNSVRRQQSSSPRNVVIPPLLVSETPNNLH RRNNVSQFPPPANDRLSQFQLSTDSSPPSYSGPVEVPPLDTIKSRLESHLLMLYYSKR SNQPGSEGRFLYPTFITQSEISGFDQMLEVYKEIILTILYMEEGMTPQEEVDNLEIAR FFVYDRLADLEDSEEVLTLAVYKVMNEYLKEKTRTVAFNMLVLELIHLEKIIRQKSKD DYAETERNLFSDIVLC" CDS complement(343253..343318) /gene="CBG27882" /locus_tag="CBG_27882" /standard_name="CBG27882" /product="Protein CBG27882" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEH7" /protein_id="CAR98307.1" /translation="MILTEGKQQIGDATVQSQVIH" CDS join(344526..344583,344636..345222) /gene="CBG00107" /locus_tag="CBG_00107" /standard_name="CBG00107" /product="Protein CBG00107" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMA9" /protein_id="CAP21613.1" /translation="MIILVIFSVCISLCTNVQAGSISTPTTTSLVHNTFGADLTRIAE SCFSGANHEQLTRYTVRRSIARTLGSVLNPEFLLTIGLTELRSTLNLEPLPPWKPYNN TDPSDLDLASAPTIQAYYDLKEPRDVMRSLDDDYNYEHNLTPAKAYLDKQFPATRKVF KRRFEKIRRSIELLDRKRIDKMNGKYYKANSLITETVEQTTSRRNLFRCWNATN" CDS complement(347429..347632) /gene="CBG27883" /locus_tag="CBG_27883" /standard_name="CBG27883" /product="Protein CBG27883" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEH8" /protein_id="CAR98308.1" /translation="MYRKIKNYSQIEPLRKLCVRLEDEKKRKQKTNERRGEEKYASIN LDSISRLRSTQLLRRVNLDDETK" tRNA complement(349276..349347) /gene="CBG28609" /locus_tag="CBG_28609" /standard_name="CBG28609" /product="RNA transcript CBG28609" /note="C. briggsae predicted tRNA" CDS complement(join(353535..353621,353758..353811, 354112..354114)) /gene="CBG27884" /locus_tag="CBG_27884" /standard_name="CBG27884" /product="Protein CBG27884" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEH9" /protein_id="CAR98309.1" /translation="MEIIEMGHIQKKRKNLEKNNRLHFKQTLEKNREKKKTTITKRRR QKK" CDS complement(355155..355223) /gene="CBG27885" /locus_tag="CBG_27885" /standard_name="CBG27885" /product="Protein CBG27885" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEI0" /protein_id="CAR98310.1" /translation="MERVFRGYQRFLEAIRTKNDEF" CDS complement(356382..356480) /gene="CBG27886" /locus_tag="CBG_27886" /standard_name="CBG27886" /product="Protein CBG27886" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEI1" /protein_id="CAR98311.1" /translation="MSTKINIQTLPSKKIQNKSQRFWNTSHTQIKK" CDS complement(join(358287..358398,358951..359120)) /gene="CBG27887" /locus_tag="CBG_27887" /standard_name="CBG27887" /product="Protein CBG27887" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEI2" /protein_id="CAR98312.1" /translation="MKRRKQKIENQLVTVEKKTMSGKQHCIFCDSRFEPFFLTNVIII PRWDLPSLKLNFITKLDVSLTDNPAETIELKESRKKNDSRKKEEESWNF" CDS complement(join(366194..366400,366647..366769)) /gene="CBG27888" /locus_tag="CBG_27888" /standard_name="CBG27888" /product="Protein CBG27888" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEI3" /protein_id="CAR98313.1" /translation="MFKLSGLSYVTSRKLEKRIKIELAGSEGVIENDRINTIWEKCVG NIFAQHWMDQRIIKSSRKQFEDVTSESNLSVKFEILLRINWKQNKDWLTAFRSIRGEK ESSTKII" CDS join(369130..369201,369325..369422,369470..369788, 369843..370201,370254..370371,370446..370619, 372400..372500,372552..372768) /gene="Cbr-npr-4" /locus_tag="CBG_00112" /standard_name="CBG00112" /product="Protein CBR-NPR-4" /note="C. briggsae CBR-NPR-4 protein; contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10320 (Serpentine type 7TM GPCR chemoreceptor Srsx) contains similarity to Interpro domains IPR019424 (7TM GPCR, serpentine receptor class sx (Srsx)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8WMB0" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8WMB0" /protein_id="CAP21614.2" /translation="MQNSTDCLNLNSELWLYREDMSTRWYIMLIFAFLYLIIIAAGII GNTCVILAITRNKALQTVPNLFILSLSCSDIVVCCTSATITPITAFKKEWIFGEVLCR VAPFIAVCKLNKNKVDVLNFQGISLCYSTFTLTAISIDRYILIRFPMRKPISHYQALG VIALICAFAATITSPIMFKQRLGEFENFCGLYCTENWGANESQRKIYGAALMFLQLVI PLTIIIISYTAISLKIGQSMILKGAKKQKTDNWEIELSDQQRMAVKRRQRTNRMLIGM VVAFACSWIWSVTFNILRDYEYLPDLIKNQEYIFGIATHCIAMTSTVWNPLLYAVLNL QLRAAFIDLMPQWLRRRLNLDGDNSSPLLTHPTMTITNKYGSTATQAIKATYINTAAN GQPYVSTSLMGKVQQEPSSFIFNGSARKKSAMMRILVQKRNSEEEEQLITKESPSPPE IQMDTLCAAPIIPRRKSAQPRSTNEKVVLPRKASF" CDS complement(join(385803..385879,385989..386061)) /gene="CBG27889" /locus_tag="CBG_27889" /standard_name="CBG27889" /product="Protein CBG27889" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEI4" /protein_id="CAR98314.1" /translation="MGKSRRRTGMWSWRWSVEPHWCSDHICFESSKKENRKRFRDADK KYKKK" CDS join(386113..386308,387121..387149) /gene="CBG00113" /locus_tag="CBG_00113" /standard_name="CBG00113" /product="Protein CBG00113" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMB1" /protein_id="CAP21615.2" /translation="MMQMGPNGPHPVLPGMPLGAMPPLPPMTPMPQMANGVGHPHMMP NGVPPGPPHHVHRGRPPGRPAAFTPLFFSP" CDS complement(join(388539..388584,388637..388677, 388828..388989)) /gene="CBG27890" /locus_tag="CBG_27890" /standard_name="CBG27890" /product="Protein CBG27890" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEI5" /protein_id="CAR98315.1" /translation="MTTYTYFFSFSFFFHFQDEKKTNRIRERLQSSNQSHGVLRLASD PNSSFQCHQMKRLRSKYQADFGLRKIEEEGDKISHLKR" CDS complement(join(395776..395787,395844..395861)) /gene="CBG27891" /locus_tag="CBG_27891" /standard_name="CBG27891" /product="Protein CBG27891" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEI6" /protein_id="CAR98316.1" /translation="MRIPMEMGD" CDS join(400855..400974,401263..402215,402263..402996, 403055..403185,403276..403401,403601..403860, 404105..404195,404320..404427,404773..404947, 404996..405072,405983..406093) /gene="Cbr-scd-1" /locus_tag="CBG_00115" /standard_name="CBG00115" /product="Protein CBR-SCD-1" /note="C. briggsae CBR-SCD-1 protein ;" /note="Predicted" /db_xref="GOA:A8WMB2" /db_xref="InterPro:IPR033031" /db_xref="UniProtKB/TrEMBL:A8WMB2" /protein_id="CAP21616.2" /translation="MNVGNGINAMNQITPAQLQVSQSDQNILLGHPTVAFSHSFSLQS IGLTPTQIAMLQNGVLTLHPPQPSSSNQNQVSSAQAVNVQAMNHPPVPQPHLAQAHAQ AQAHAQAQAHAQAQAQAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAHAQAQAQ AQAQHHLQAQQQAAQAQQQLQAQQAAQQAQLQAQQQATAHLQAVAAQQQAQQQALAAQ QNAHQAAQQAAQQAGNPAGIVVSAPQPPGQPNAAQLIHQIQAMQAAQNAQAQVAQAAQ AAQQSAQLSQQMTANQTAQQLAHPTCPPPPPGVPSMPWPVGSPVCHVPFFDTNSYRNV NVEVAPSHDTSGMDLPLVDINTLRFFFNLGVQQSRNLLAARQAVSGHPISLAATPTPT PAQHPSTSSQEGNSGGTPSNPNLVALVNQAASGGNVPTQSQIEQLNSLIGHNSLLRQA QQLQTPQGGAPVPLQNTLLQQQLNQILRNQQQQQQQQALQQQLQQQASQNALQQQINA LVQQQQQQQQISLSAGTSGSIQNQERKLGSADVAAGHASVGLTPTPFQLNGPGMPSAT TPVPPAVTPNAQQQQFQKHIDGQTMLLQQALLNANNNGQNGNKATLHDIRFQAMAQQQ QVAASGIGQGVSNLHPFIRPTEAVRQSVMNGSNSEPNVSPRPIPLDPSPPRATSGGAA TGEPTKESLINVEDDKPTTSAAGPSHPHPLNPIGIANPLNAAASAAGFHNNSKTNTAV SGNGNPGSNVATPVLSMIQMSEDHYTETFRKNEQKRQQGLTNTNGQAGGSPKTDGVPD ADERPPALAPILMMSYLNNCMSHAKTHLTANGVQVGVDDNGQVVDFAARPIDPIFKDA REDMKAKDVRNLEHHPGKRPFPGAVTSQPKSIFAKKSPSPQRHPGQSPHQTPSPMRQQ INQNPIGINRPIPDVAPPKIEPETDRSPSEDLDDDGAKRLRIATDEE" CDS complement(join(412743..412856,412906..412976, 413141..413300,413492..413950,414095..414128, 414400..414644,414817..414907,415507..415613)) /gene="Cbr-lips-1" /locus_tag="CBG_00116" /standard_name="CBG00116" /product="Protein CBR-LIPS-1" /note="C. briggsae CBR-LIPS-1 protein; contains similarity to Pfam domain PF01674 Lipase (class 2) contains similarity to Interpro domain IPR002918 (Lipase, class 2)" /note="Predicted" /db_xref="GOA:A8WMB3" /db_xref="InterPro:IPR002918" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8WMB3" /protein_id="CAP21617.2" /translation="MLLINSYCFLASMVIIGAMADVYGPVSDHFLHHLNKRPKRNDAI IRQVEALGDTGSFGGKAFSDEKRVGALFSLVANTHSDVEEGMTTVSGKSQVQKLWEVI AAEGADVGEGDHLMRGNFCSNALECFWKHNIRKNAHTTNMTKHSIGGGKVQTERISWL TNTPIVFIHGNSDSALKYENHPFQTGFNDVIKYFMDKDYTLAELYGITYGNRSMAHSF SNFMQCEYFQLQRRFLEFVLHYTKSAQVNIVAHSMGATIARRIIKGGQYTTSTESCDL GHDLTKRVNTFISIASANYGMCICEHALAFAACGMETGFHPGTCTGTSCDSQDYKSTE NCGDVKYSSTLMDLNKDGKKVAGFVASLWSEDDEIIGNLVWGRHTSLVPHSDMRKIYT NLSHMDMKSSTAADQYNIIRMNDQKFTFADSTEY" CDS complement(join(416677..417006,417571..417666)) /gene="CBG27892" /locus_tag="CBG_27892" /standard_name="CBG27892" /product="Protein CBG27892" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEI7" /protein_id="CAR98317.1" /translation="MHLMRVLASKKMDHKKQRQRLSIINVWRDPTAVLQIWIKITVEK KHKESDQLNESNETSSSGNVALKVFFSQGIVCRSHEAYSVFGLRFRSVTIRIPRHHTP DIFFREDRKCIFLEEKNSMCTRTRSFTYSNSLSHLDPDT" CDS complement(join(418392..418559,419476..419572, 419618..419715,420056..420147,420581..420644, 420865..421026,421563..421679,421816..421909, 421957..422093,425271..425564)) /gene="CBG00117" /locus_tag="CBG_00117" /standard_name="CBG00117" /product="Protein CBG00117" /note="contains similarity to Pfam domain PF00566 Rab-GTPase-TBC domain contains similarity to Interpro domain IPR000195 (Rab-GAP/TBC domain)" /note="Predicted" /db_xref="GOA:A8WMB4" /db_xref="InterPro:IPR000195" /db_xref="InterPro:IPR035969" /db_xref="UniProtKB/TrEMBL:A8WMB4" /protein_id="CAP21618.2" /translation="MTTRYMERLAKIEEVLLIANKKIDMNDFRAGCSYGVPESLRPLA WRLLLHYLPLERHKWQSFLADQRNNYDQMIEQIIVEPGNIAMEQSNSQTSDSDHPLSD HPTSDWQAFFQDNKVLSQIDKDVRRLYPEIQFFQLLSKFPHPHGMKYPLSRRVINHQE LTSQEFGANRDGIVGEGEKMQLIMKSLFLQCVKTNLAKGSHDENQAPNSEFHWHIVER ILFIYAKLNPGVQYVQGMNELVAPIYYVFANDTDEEWAAYAEADTFFCFQQLMSEVKD NFIKTLDDSICGIESSMSAFHNMISTFDPELHKHLTSTLEIKPQFYAFRWLSLLLSQE FPLPDVITLWDALFSDPQRFALLPYVCLSMMVLQRESLISGDFPFCVRLLQNYPDSDV AKIVAYAQDIRDGKAPRPASKEVSKGSKIAKHARQLSDTLRNLSIIKK" CDS complement(join(426411..426497,426798..426887, 427461..427466,427491..427677,428211..428441, 428491..428573,428620..428859,428910..429233, 429650..430030,430080..430274,430323..430415)) /gene="Cbr-atf-6" /locus_tag="CBG_00118" /standard_name="CBG00118" /product="Protein CBR-ATF-6" /note="C. briggsae CBR-ATF-6 protein; contains similarity to Pfam domains PF00170 (bZIP transcription factor) , PF07716 (Basic region leucine zipper) contains similarity to Interpro domains IPR004827 (Basic-leucine zipper domain), IPR011616 (bZIP transcription factor, bZIP-1), IPR011700 (Basic leucine zipper)" /note="Predicted" /db_xref="GOA:A8WMB5" /db_xref="InterPro:IPR004827" /db_xref="UniProtKB/TrEMBL:A8WMB5" /protein_id="CAP21619.2" /translation="MDFDSSQLGPDIDEFLNNPDFPAHFDELELDSLLYEESASQESS PSSSFGFSDENAGFRSRDGGSLGDSSSSDSSPPLSCTNFTENDQEMWEFGFQNPNPFE NFDQRFDQSYQQQEEVFDDQHGEYQEVQYDQEVQYDQDVLCDQQIQYVEEEKIQSEFQ RPNKIIAILPRPQQIKRVITKPVHKIYRVKESEHQQVQQHHTTYKAVPVASFFFEIFY GYSRCVHPSPRPPPPTVRYSNNLPIQPKQGQLTRIVPARVSAQTVSPQKREAKQPGFT QDQRKIRNRMYAQASRIRKREAEEEMKRTIEELTTENDILRNENTILKQRLAYYEPET PTYEYSPMEKRSQVRKKMMAAGTVLMIFGLFAVISPFNVENTLHVKPQIIAIPNETVM MARHSRVLIAEEAPPVSKLPHHTVHNYPNSTQTDCEMYKLNATETRRVNSEIERWVQV HSFDNVPIQHSGGLFNKEAMRKFNEARKQKNPVAFGPETLQAKKKSEKAAQQFRERTW LQLDQLNTANKIGVKNEKVENKSQDIAKIASIVRQKRDTLYIMALQDYVLLPSLTKGG NTIPKLSLLLPSDQKQGKIMKNDTNSEKIKENKKKLKICIMTVTYTLLRVDCEVTGTG RLTLSNKQLSYLMP" CDS join(433530..433670,433720..433867,433913..434042, 434094..434184,434232..434372,434419..434682) /gene="CBG00119" /locus_tag="CBG_00119" /standard_name="CBG00119" /product="Protein CBG00119" /note="Predicted" /db_xref="GOA:A8WMB6" /db_xref="UniProtKB/TrEMBL:A8WMB6" /protein_id="CAP21620.2" /translation="MGVLNVFSSNLKLETELDLTLAVTFVVFLPFLGILFLYYKSRHC DSQCSHHPINTNLVILSAFQVFGSSLLSCLIALLKSSQHIIMKSQFLFGSYRVTVCLL KNMSMVTITVFYYIVFLSALQRIVLMVNAKIGTRAMTGRRLNLYLILLYPVAIVSAFN KIMVVDKTPWLEIGVITITLIMSTFNLFLVNHIEREPIACVHKTALAQTAPIIILLAL FTAAQLYILTRSENFISKSAFQSLTTTVFSAVIPFFIIIGSSSKRKEAIRLLTCRAER RNARRTKYAASRTPLTGSNVASIVLTRF" CDS complement(join(435622..435762,435789..436222, 436274..436568,436615..436765,436815..439351, 439400..440727,440969..441128,441181..441362, 441413..441881,441933..442073,442127..442255, 442377..442439)) /gene="Cbr-myo-2" /locus_tag="CBG_00120" /standard_name="CBG00120" /product="Protein CBR-MYO-2" /note="C. briggsae CBR-MYO-2 protein; contains similarity to Pfam domains PF00063 (Myosin head (motor domain)) , PF01576 (Myosin tail) (2), PF02736 (Myosin N-terminal SH3-like domain) contains similarity to Interpro domains IPR004009 (Myosin, N-terminal, SH3-like), IPR023827 (Peptidase S8, subtilisin, Asp-active site), IPR002928 (Myosin tail), IPR001609 (Myosin head, motor domain)" /note="Predicted" /db_xref="GOA:A8WMB7" /db_xref="InterPro:IPR001609" /db_xref="InterPro:IPR002928" /db_xref="InterPro:IPR004009" /db_xref="InterPro:IPR008989" /db_xref="InterPro:IPR027401" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR036961" /db_xref="UniProtKB/TrEMBL:A8WMB7" /protein_id="CAP21621.2" /translation="MDHENDPGWKYLRRSREQMLEDQSRAYDSKKNVWIPDAEEGYIE GIITKTAGENVTVSTGPGVEKTVKKDIVQEMNPPKFEKTEDMSNLTFLNDASVLYNLR ARYAAMLIYTYSGLFCVVINPYKRLPIYTDSVARMFMGKRRTEMPPHLFAVSDEAYRN MLQNHENQSMLITGESGAGKTENTKKVISYFAAVGAAQQETFGAKKAEEDKDKKKVTL EDQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFSKQGRVASCDIEHYLLEKSRVI RQAPGERCYHIFYQVFSDFVPTLKKDLLLNKPVKDYWFIAQAELQIDGVNDKEEHQLT DEAFDILKFSPTEKMECYRLVAAMMHMGNMKFKQRPREEQAEPDGTDEIMEYKLTPLF SDAERAAKCFGIDPEEFLKALTRPRVKVGNEWVNKGQNIEQVNWAVGAMAKGLYSRIF NWLVKKCNQTLDQKGISRDYFIGVLDIAGFEIFDFNSFEQLWINFVNEKLQQFFNHHM FVLEQEEYAREGIQWTFIDFGLDLQACIELIEKPLGIIAMLDEECIVPKATDATLAQK LIDQHLGKHPNFEKPKPPKGKQAEAHFAMRHYAGTVRYNVMNWLEKNKDPLNDTVVTV MKASKEHALIVEVWQDYTTQEEAAAAASKGGPGGKKKGKSGSFMTVSMLYRESLNKLM TMLNATHPHFIRCIIPNEKKQSGMIDAGLVLNQLTCNGVLEGIRICRKGFPNRTLHPD FVQRYALLAADESIIGKTDAKKGSALMLARLVKEKKLEEDNFRVGLTKVFFKAGIVAH LEDLRDSRLAQLITGLQAQIRWFYQLIERKRRVEKITALKVIQRNVRSWAELRTWVWF KLYGKVKPLINSGKIEAQYEKLQETVATLKDTVVQEEEKKRQLQEGAERLNKETADLL AQLEASKGSTREVEERMTAMNEQKVALEGKLGDANKKLEAEEARAVEINKQKKLVEAE CADLKKNCQDVDLSLRKVEAEKNAKEHQIRALQDEMRQQDENISKLNKERKNQEEQNK KLTEDLQAAEEQNLAANKLKTKLMQSLEDSEQTMEREKRNRADMDKNKRKAEGELKIA QETLEELNKSKSDAENALRRKETELHNLGMKLEDEQAAVAKLQKGIQQDEARVKDLHD QLADEKDARQRADRSRADQQAEYDELTEQLEDQSRATAAQIELGKKKDAELTKLRRDL EECGLKFGEQLTVLKKKGSDAIQELSDQIEQLQKQKGRIEKEKGHMQREFDESSAALD QEAKLRADQERIAKGHEVRLLELRLKADEQSRQLQDFVSSKGRLNSENSDLARQVEEL EAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKESIEDEVA GKNEASRQLAKASVELDQWRTKFETEGLIGADEFDEVKKRQNQKTSEIQDALDACNAK IVALENARSRLTAEADANRLEAEHHAQAVSSLEKKQKAFDKVIDEWKKKVDDLYLELD GAQRDARQLSGEAHKLRGQHDTLADQVEGLRRENKALSDETRDLTESLSEGGRATHAL SKNLRRLEMEKEELQRGLDEAEAALESEESKALRCQIEVSQIRAEIEKRIAEKEEEFE NHRKVHQQTIDSIQATLDSETKAKSELFRVKKKLEADINELEIALDHANKANEDAQKN IRRYLDQIRELQQTVDEEQKRREEFREHLLAAERKLAVAKQEQEELIVKLEAIERARR VVESSVKEHQEHNNELNSQNVALATAKSQLDNEIALLKSDIAEAHTELSASEDRGRRA ASDAAKLAEDLRHEQEQSQQLERFKKQLESAVKVLCVVQKFAIALATTYLFIFCARHS LSKQLPKSYLMSFIRFVFQDLQERADAAEAAVMKGGAKAIQKAEQRLKAFQTDLETES RRAGEASKTLARADRKVREFEFQVAEDKKNYDKLQELVEKLTAKLKLQKKQLEEAVSL IINMTEEQANSHLSKYRTVQLSLETAEERADSAEQCLVRIRSRTRANAEQK" CDS join(443818..443852,443960..444072,444183..444392, 444443..444596,444644..444830,444979..445084, 445131..445237,445280..445450) /gene="Cbr-cdf-2" /locus_tag="CBG_00121" /standard_name="CBG00121" /product="Protein CBR-CDF-2" /note="C. briggsae CBR-CDF-2 protein; contains similarity to Pfam domain PF01545 Cation efflux family contains similarity to Interpro domain IPR002524 (Cation efflux protein)" /note="Predicted" /db_xref="GOA:A8WMB8" /db_xref="InterPro:IPR002524" /db_xref="InterPro:IPR027469" /db_xref="InterPro:IPR036837" /db_xref="UniProtKB/TrEMBL:A8WMB8" /protein_id="CAP21622.1" /translation="MSSERAPLLENGASLIYATDEGRKTTVTYDNFHCHDEAESTDSH DSNQRATRILWLTVALCLFFMVCEVVGGVLAGSLAIVTDAAHLLTDFASVLISLFSLY IARRPPSQTMSFGFHRAEVLGAFFSVFLIWIVTGLLVVLAVMRIISGDYEVEGGIMAI TAALGVVVNLVMLALLYFGGHSHSHGGGSSHSHGHSHGGNGNNINVRAAFIHVLGDLL QSLGVLVAALFIYFQPSWVIIDPICTLLFSVIVLCTTIYILRDAMIVLLEGRPSNIDF AKVFTSLEDIEGVKKVHDLRIWCLTMDKIALSVHLEIDSNSQSQSILRETRKMLKQTY NVHEITIQIEEFGANRSDCDKCEPLK" CDS complement(join(445543..445737,445794..445902, 446025..446116)) /gene="CBG00122" /locus_tag="CBG_00122" /standard_name="CBG00122" /product="Protein CBG00122" /note="Predicted" /db_xref="GOA:E3CTV1" /db_xref="UniProtKB/TrEMBL:E3CTV1" /protein_id="CBX33030.1" /translation="MTLHHCFICLLIILISQVNYILAEDEDHPPRVNEASRDNSDVWL VVILCLLFCFALRHMNDFYVGESVTLVAEGEFSHRFSRKQTNKHLERVEKDFNDMFQK LCEKYERDLDSDGCCGYYEEKKKVTDKLV" CDS join(448593..448929,448979..449450,449495..449591, 450041..450284,450332..450522) /gene="Cbr-odr-7" /locus_tag="CBG_00123" /standard_name="CBG00123" /product="Protein CBR-ODR-7" /note="C. briggsae CBR-ODR-7 protein; contains similarity to Pfam domain PF00105 Zinc finger, C4 type (two domains) contains similarity to Interpro domain IPR001628 (Zinc finger, nuclear hormone receptor-type)" /note="Predicted" /db_xref="GOA:A8WMC0" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR013088" /db_xref="UniProtKB/TrEMBL:A8WMC0" /protein_id="CAP21624.2" /translation="MNKGMLGYYCINCIMAMPHFTCYPMILSESDVTVALLKNMAEKV DLQANNNGQQQWGQQFPPPFTGRPPGSQHPFNYEEQHRVREPVSHDFDNDLARQQTTA PFMQHFFPRIVPSLPFPDFTDYQRFNGFQRNAFFPTPFGPQFVNPAWNSFQISPAMHN PMMGMDNFNTPQHGQHPSINSTAKGKESLQSYQETSLTQATSSTPDKPPVLLAEYNIK QSLDEKFESGSEMKAVKDEPMENLDSKKQNEAKTDHQRYSSLSTDKQFEQSRTALPSF TPTFYSVPVAPLDIATNNTFKPELSPPPGSLHDCQVCLSTHANGLHFGARTCAACAAF FRRTISDDKSYVCKRNQRCTNASRDGTGYRKICRACRMKRCVDIGMLPENVQHKRARR ESTGSTPPPPKIGFDNFFPGCFYPPFQQNSSAVPSQPSTAESGRPSVTENNSST" CDS complement(join(451497..452292,452570..452730, 452779..452878,452926..453230,453693..453758, 454210..454481,454528..454717)) /gene="CBG00124" /locus_tag="CBG_00124" /standard_name="CBG00124" /product="Protein CBG00124" /note="contains similarity to Pfam domain PF00400 WD domain, G-beta repeat contains similarity to Interpro domain IPR001680 (WD40 repeat)" /note="Predicted" /db_xref="GOA:A8WMC1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:A8WMC1" /protein_id="CAP21625.2" /translation="MPGRIDLSNNASVRMISLNVDNLACAYLANLYIPIFTLDTEKVL RRYEVPNQISGLHFSMNKKNVIYAVDDSFGLHVFDVRTDTKKKHRLNPECENHNVVCT ALSSNNEMIAVASSEFGGGILDVRGSRRREHHAHVISLYDARYPTDPITSYYYDQTKK SQLIFLLKWSQHQETMKRHKASVTSMEFYLNGNYLITGDNDGAIKSFDCSLRDEDNAI RWERWVKGPISKVGVINKRIVYGVSNRSEGTVFVDAKGSLEVLYGSVNNSADEPIVKH SKAFFKKPEWCVGLIKGVTDDIPLVAVHGVEKKKFISLTAMNQEGVRQDTPLLSYTGH TGEVKCMTATPNLLLTGGEDGKVVVQIANFKNPKFGEDNLPSHHRLTLRRGKLAEQAD RGESGDSDSAGSDLDSDSNNPSTSAAASSSKSKSSSSSSKEKTEASSKPKKDEKEKKE KKEKKKDQPLISSAGASSSSTSKPTAESSSKSESDKKKEQKEKEKEKERKERKEKKEK GDQSSTSSTTAVASSSSSSSRHETKEERRARKEKEAAEEKAKLDAKLAAMTAEERKAW DEREKRRLAKLAETPEQRAERKQKAREERERIEKLEKEERRKKRREEKEAAAGASSSK KSKTE" CDS join(456395..456502,456556..456684,457863..457931, 458029..458106) /gene="CBG00125" /locus_tag="CBG_00125" /standard_name="CBG00125" /product="Protein CBG00125" /note="contains similarity to Pfam domain PF04117 Mpv17 / PMP22 family contains similarity to Interpro domain IPR007248 (Mpv17/PMP22)" /note="Predicted" /db_xref="GOA:A8WMC2" /db_xref="InterPro:IPR007248" /db_xref="UniProtKB/TrEMBL:A8WMC2" /protein_id="CAP21626.2" /translation="MIFLKAPTLFIWFRVLEKVKGGSRTLLLAKKLCIDQLCFSPLFN AAIIFNLRFLQHQSIGKSCELLKEDWLNIYATSLKIWPLVQVVNLCFIPLNYRVILNQ VVAFFWNSYLSYTTQRPIDHIEQFY" CDS complement(join(458659..458729,458780..458843, 458892..459635)) /gene="CBG00126" /locus_tag="CBG_00126" /standard_name="CBG00126" /product="Protein CBG00126" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMC3" /protein_id="CAP21627.1" /translation="MVDPRPMLENVRDLAGEAARHQLRFARQAAIRSGLYLPPLPVPH LLFPNLNHAPEADHRQDLLAELRVENFRMQQQHLNEAENNDYRPMSPENSDNEDDEVM EAHQRQRRMRRHWRNYMHQRVDPIPQGIIDRLMEELEREARRPLQNRQNQNNNNNNNV NNNNNGNYRNFNGMLSPLPSPGGSPPESEDEEEPEDQARAADADVEMLNVQFMEMQPN QARSRKRQNSKAPVAIKKKRVTFKSESADEAAYSDDDDIYDNIPKVAVYQKQNEDDDE GFFGGPSRRQQNIRCA" CDS complement(join(465328..465609,465883..465897)) /gene="CBG27893" /locus_tag="CBG_27893" /standard_name="CBG27893" /product="Protein CBG27893" /note="contains similarity to Interpro domain IPR018271 (Ribosomal protein S14, conserved site)" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEI8" /protein_id="CAR98318.1" /translation="MDSILRIFYGTMVLPCRQVHSIKLPEFDFWISGNFSRNFEKSEK KFEKVKKYKKKVNFFLLQGNCRKLVPSQKMIKNRPVHFRFLREIPKMYKLREFC" CDS complement(join(467464..467559,467603..467833, 469153..469218,469610..469721,472136..472298, 475057..475210)) /gene="CBG00127" /locus_tag="CBG_00127" /standard_name="CBG00127" /product="Protein CBG00127" /note="contains similarity to Interpro domain IPR000580 (TSC-22 / Dip / Bun)" /note="Predicted" /db_xref="GOA:A8WMC4" /db_xref="InterPro:IPR000580" /db_xref="UniProtKB/TrEMBL:A8WMC4" /protein_id="CAP21628.2" /translation="MSTTAAEQPVLEVLNQNADKPKKKFQVVPVPGEFTRGRWKVIDT RFGSAMGIFGNYPPEDEYKMISVVRNNVITVRKKFRRHPPLPEDATTKEADSIRVLQK SQPRLDQVPVTNQIKILIMDPETAAVTAQKLAANAVGVTEVVGTFFKDGIVKMRSSLN LEKTMVAPTSDITSSMSSVTLLDTDPAKMDETAKLANATSNTVVAIDNKIVQAMDLVK THLTFAVREEVECLRSTITDLEERLNALREENRLLRENVSPDVLAFITANKQIVE" CDS complement(join(481234..481357,481503..481744, 482439..482802,482876..482961)) /gene="CBG00128" /locus_tag="CBG_00128" /standard_name="CBG00128" /product="Protein CBG00128" /note="Predicted" /db_xref="InterPro:IPR021942" /db_xref="UniProtKB/TrEMBL:A8WMC5" /protein_id="CAP21629.2" /translation="MSSDIPDSDRKLSYDCLKCVTQKFEANFRFRLAEGLPKIQWADK AVPLFISKLTICEEGHKLNDTDYRLGVICHTCNGYAPKTIICGNQYGHLRDIDRFRFE KRLFPEFTPGDIFVQDFNPQRGVDDDLELAITEASFMMEHDRLTALEKLCDSWDVNYI ALCREIQNKKIVISLGQQMQPEQYGVLVQNLIDAKGTLGTYYDITQPGEKETRIGMRV ISNRYDNAVMGERLVIIPLSHQLQLNVSCEPYLMNPRHHLRTMKIEVVQIQAN" CDS complement(join(483475..483601,483892..484490, 484675..485341,485420..485505)) /gene="CBG00129" /locus_tag="CBG_00129" /standard_name="CBG00129" /product="Protein CBG00129" /note="contains similarity to Pfam domain PF12078 Domain of unknown function (DUF3557) contains similarity to Interpro domain IPR021942 (Protein of unknown function DUF3557)" /note="Predicted" /db_xref="InterPro:IPR021942" /db_xref="UniProtKB/TrEMBL:A8WMC6" /protein_id="CAP21630.2" /translation="MLAAIPDMDRRLSYGSLKCVLQKFKANFRFRLAERLPEIRCAEK AVPLYIDKFTFAEEGFKLNNTEYQLGVICQVRDGPAQKTFIGQAQYGGHPRDIDRFGY EIRSFTELTPGDIFVQDYNPQMDADDDLEFETTEESLLIQQNRLIALEKEKIELEHAP EEVENIPENPMELDLSEEDLIGIEPEEEDDLMDPDQVERGRDQVLSRKEQLEKINISI IYAKTLLAYIEFDLERNRRKRDNLPSLFDFFIQFTKTSPDGTVYIERFNYDKSLMAAR KYLICKLLGNRKPVMKIKSLGFWARPGGGLVISLPEGIKLDVQNFGTSGNLSDVLERV EPVLEYPNRPFNLLTSDSLRLEDAQNPKVQNAEVLVLSDNWDVDYIALCREVQNKNIV IFLGQEMQPLEYGLLVEDLIETKGTVGTFYEITQTGEDKTKEAMRFIAAHFENVVMRE SLIIIPLSHQLQLNVSCEPYLMDPSLVHLWTMKMEVVQNQKN" assembly_gap 486222..486317 /estimated_length=96 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(488047..488737,489107..489165) /gene="CBG27894" /locus_tag="CBG_27894" /standard_name="CBG27894" /product="Protein CBG27894" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEI9" /protein_id="CAR98319.1" /translation="MFFKREKIVKKFLTLQAKFFRSCHRASENEKEMKQENEDLKKKL KLAELTSRNEVNELKKKMKRQEKKSEERMKKLKGKMTSQLLKEVIECTGCVLDQAWIV PKCEEARVESSDYQEMMELLDTEKFKVLEAELEKCQDELDEERSKNVRLLDKFRYLDE LEEWDVISEFEKAFMTSEDTMKTWKQEELNRIKKLSDRLEELRQTTDPEFYPEGPSFM QLSENTMEGFNLDIADNGVVTRSTKTLIYDN" CDS complement(join(490099..490281,490443..490478)) /gene="CBG00131" /locus_tag="CBG_00131" /standard_name="CBG00131" /product="Protein CBG00131" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMC7" /protein_id="CAP21631.1" /translation="MASSYFKILDVTYKCEKECPCRPENKLTSALKLPTEQPTAQSTA QKKVRFTVVPVTESTTFMSGSPIRSGWF" CDS join(503256..503329,503384..503496,505219..505402, 505449..505672,505745..505920,506690..506791, 507230..507337,507694..507790,507900..507985, 509155..509268,511853..511927,512598..512681, 514452..514538,514922..515036,515195..515356, 516394..516726,516774..516881,516937..517383, 517431..517591,518055..518234) /gene="Cbr-lin-2" /locus_tag="CBG_00133" /standard_name="CBG00133" /product="Protein CBR-LIN-2" /note="C. briggsae CBR-LIN-2 protein; contains similarity to Pfam domains PF00018 (SH3 domain) , PF07653 (Variant SH3 domain) , PF00625 (Guanylate kinase) , PF02828 (L27 domain) (2), PF00595 (PDZ domain (Also known as DHR or GLGF)) , PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR011511 (Variant SH3), IPR008144 (Guanylate kinase), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR008145 (Guanylate kinase/L-type calcium channel), IPR001478 (PDZ/DHR/GLGF), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR014775 (L27, C-terminal), IPR001452 (Src homology-3 domain), IPR000719 (Protein kinase, catalytic domain), IPR008266 (Tyrosine-protein kinase, active site), IPR020635 (Tyrosine-protein kinase, catalytic domain), IPR020590 (Guanylate kinase, conserved site), IPR004172 (L27)" /note="Predicted" /db_xref="GOA:A8WMC8" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001452" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR004172" /db_xref="InterPro:IPR008144" /db_xref="InterPro:IPR008145" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR014775" /db_xref="InterPro:IPR020590" /db_xref="InterPro:IPR020635" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR036028" /db_xref="InterPro:IPR036034" /db_xref="UniProtKB/TrEMBL:A8WMC8" /protein_id="CAP21632.2" /translation="MKELDPDESNLLFDNQITIRDVIEQGPFSNVYRILHEPSNRKFI MRSINLGLFKKHTGLGPEEVDEEIRICQNLQHPYICRLEKNIISTNYRHMIFENIEGH DICFEIVQRASSGFVFSEYVVSHYTKQLLDALDYCHNKKIVHRDVRPHNLVLATYVTK ISENQKNSNFRKDTSAPMKLCGFGVAKDLSEIGGSLACGRVGVPQFMAPEIVRKDRVS CSSDIWSSGVVLFLLLAGRLPFTGSTSDIYERIMHADVDVDRYMPNISESARNLVRRM LSADPSKRISAKEVVALNHEWIRDKEHMASRKHMNDVIDHMRRYNESRKLKSNVLSAV NSGRFDETTPRLGTPQTAFVDGSSPGGDCCQRGESTSTDAAEPPVDKDLSGAYKVLGS LDAINSLLDPGSYKPGSTTFQKIHDDGSVRNLLRLYDKINALPCEPVVTEVDTSTLRK ETVLQIDGLLGPSPEALELRQLLNSRHLASCVQALDVVVCEIRDAKNETGGSGDKDPN CVSSDPAPAYLNGGVLPLGSQRAGTSYEHFNHSAVHTSYDEEEEDLYDCMSRLRLVQF QKDTQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREINGMSVANRSVES LQDMLRDARGQVTFKIIPSYRSAPPACEIFVRAQFDYEPIQDDLIPCPQAGIPFKTGD ILQVISKDDHNWWQARFVSSFPSIGNSSNAQRSSQQQVAGLIPSPELQEWRTACLAME RSKNSCNTHCMWFNKKKKYYTTKYLQKHSALFDQLDLVTYEEVSNVFIRGKSLIYCFQ VMRLSQYRRKTLVLLGAHGVGRRHIKNTLIHRHPNRFAYPIPRMKNKKNYSKNIKLSD TTRPPRKDEVDGKHYYFVTNEQMMADIQNNEYLEYGTHEESMYGTKLETIRNIHKSGK IAILDVEPQALKVLRTAEYSPFVVFIAAPNLQGMQDPDGSLEKLLNESDVLRQAFGHL FDFIITNSDIDDTISQLERLVEKLPAYPQWLPVTWVY" CDS complement(512967..513308) /gene="CBG00134" /locus_tag="CBG_00134" /standard_name="CBG00134" /product="Protein CBG00134" /note="Predicted" /db_xref="GOA:A8WMC9" /db_xref="UniProtKB/TrEMBL:A8WMC9" /protein_id="CAP21633.1" /translation="MNNAAVDEARDSRWRVINHNFSGDFSLSGHFASIYPTYIEKNNV ISLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSFSLSLSLSLSLFLSLSLSLSLSLF LSLSHSFTSVM" CDS complement(join(519274..519348,519955..520070, 520118..520328,520376..520521,522023..522251, 522654..522812,522859..522970,523250..523464, 523674..523788,524321..524397,524444..524526, 524611..524671)) /gene="CBG00135" /locus_tag="CBG_00135" /standard_name="CBG00135" /product="Protein CBG00135" /note="contains similarity to Pfam domain PF00153 Mitochondrial carrier protein contains similarity to Interpro domains IPR018247 (EF-Hand 1, calcium-binding site), IPR002048 (Calcium-binding EF-hand), IPR002067 (Mitochondrial carrier protein), IPR018108 (Mitochondrial substrate/solute carrier)" /note="Predicted" /db_xref="GOA:Q628Z2" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR002067" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR018108" /db_xref="InterPro:IPR018247" /db_xref="InterPro:IPR023395" /db_xref="UniProtKB/Swiss-Prot:Q628Z2" /protein_id="CAP21634.1" /translation="MSVTVETPLQAGPLLKEKKQELIDIKNIQEHARTVQPFKASKHQ PLISGSVSKEAAIATHAALHIDLTPEKEKKIREMYDRLDADNDGSIDIRDLTQALSSQ TPHIPATMAPKLLAKMKREDSDRVTYADFTNYVIAHEARLAEVFDQIDSNRDGEVDVS EIKSYCKEMGVNLDDHKALSIVKKMDQSGSSSVNLNEFQDFMLLYPSTDMREMVDFWR HNLIIDIGEDGQVPEDFTPQELQSGVWWRHLVAGGVAGAMSRTCTAPFDRIKVYLQVN STKTNKLGVVSCVHLLHAEGGLKSFWRGNGINVIKIAPESAMKFMSYDQIKRWIQEYK GGAELTTYERLFAGSSAGAISQTAIYPMEVMKTRLALRRTGQLDRGMIHFAHKMYDKE GIRCFYKGYLPNLLGIIPYAGIDLTVYETLKSCYTQYYTEHTEPGVLALLACGTCSST CGQLASYPLALVRTRLQARAISPKNSSQPDTMIGQFKHILQNEGFTGLYRGITPNFMK VIPAVSISYVVYEKVRKQLGATMS" CDS join(526712..526876,526932..527020,527066..527150, 528029..528217,528267..528338,528421..528495) /gene="Cbr-nekl-3" /locus_tag="CBG_00136" /standard_name="CBG00136" /product="Protein CBR-NEKL-3" /note="C. briggsae CBR-NEKL-3 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) (2), PF00069 (Protein kinase domain) (2)contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR000719 (Protein kinase, catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8WMD1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/TrEMBL:A8WMD1" /protein_id="CAP21635.2" /translation="MDKISNMYNFDDPPPEKLSLELFKIEKKIGKGQFSEVFRAECTW VELHVALKKIQVFEMVDQKARQDCLKEIDLLKQLNHVNVIRYYASFIDNNQLNIVLEL AEAGDMSRMIKSPERIQESGYNFKSDLWSTGCLLYEMAALQSPFYGDKMNLYSLCKKI ENCEYPPLPADIYSTQLRDLVSRCILPEASKRPETNEVLEVAEHMNNHFSPPDEQSPV PSTPQF" CDS join(537516..537597,537777..537913) /gene="CBG00137" /locus_tag="CBG_00137" /standard_name="CBG00137" /product="Protein CBG00137" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMD2" /protein_id="CAP21636.1" /translation="MGQENSKCPHQSLAEKRYKVERPKTKKVSSGSATDRSAPQKMDE ESAPLRLTVSSCDVNAEDDLPEMRKLSV" CDS join(539064..539216,539264..539402,539508..539725, 539808..539948) /gene="Cbr-glb-13" /locus_tag="CBG_00138" /standard_name="CBG00138" /product="Protein CBR-GLB-13" /note="C. briggsae CBR-GLB-13 protein; contains similarity to Pfam domain PF00042 Globin contains similarity to Interpro domain IPR000971 (Globin, subset)" /note="Predicted" /db_xref="GOA:A8WMD3" /db_xref="InterPro:IPR000971" /db_xref="InterPro:IPR009050" /db_xref="InterPro:IPR012292" /db_xref="UniProtKB/TrEMBL:A8WMD3" /protein_id="CAP21637.2" /translation="MNFHQTNFRCEPNEEEATSMANSAGAKSKCKHFLTRRERILLEQ SWRKTRKTGADHIGSKIFFMVLTAQPDIKAIFGLEKIPTGRLKYDPRFRQHALVYTKT LDFVIRNLDYPGKLEVYFENLGKRHVAMQGRGFEPGYWETFAECMTQAAVEWEANRQR PTLGAWRNLVISCIISFMRRGFDEENGKKKLYSYNGQGFSSNRARRSVSPYAPSVH" CDS join(543404..543427,543475..543663,543710..543832, 543876..544118,544166..544264) /gene="CBG00140" /locus_tag="CBG_00140" /standard_name="CBG00140" /product="Protein CBG00140" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMD4" /protein_id="CAP21638.1" /translation="MRSFQPYQKQESKVEPVRPTVIAKAPVTRTNVERKIPKIHYMER ELNNGKMVRIPVVDDNAVFALMANGFKRCYAAPGDVESIETNPENLKHVICRPSPFVP IVEQLTPFSLATLLQPSPQQLYLYHARQQTRRLRRTKNVTAEEYAKALAGDLNPLLKK YRTHKRQQKSFPMEPRMPQGKYPEPPPAVSVAEEIFVDVETIEDEDNAHILSVPQDNS ANLAISK" CDS complement(join(545114..545488,545917..546084, 546134..546184)) /gene="CBG27895" /locus_tag="CBG_27895" /standard_name="CBG27895" /product="Protein CBG27895" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEJ0" /protein_id="CAR98320.1" /translation="MYGHCQDYNLYEAPIYENLIDPPLFYIERFSPILQETDLKPRYR TEPPMLAPTPRTPPPSREYKKEFQSFLSECPPPEPTDTRNTPVHLPEISRQEPARAKL SKQARPPKKAKNCSKLPSDPPQRGRARTPRFFIKMAQICAKWEQSQKDRASASIADRL NTLTIGEFYPQDPSPVLTMVTSKLLMIIKLISLFEFF" CDS join(548269..548385,548434..548553,548597..548689, 548735..548821,548869..548988) /gene="CBG00142" /locus_tag="CBG_00142" /standard_name="CBG00142" /product="Protein CBG00142" /note="contains similarity to Pfam domains PF02311 (AraC-like ligand binding domain) , PF07883 (Cupin domain) contains similarity to Interpro domains IPR004313 (Acireductone dioxygenase ARD family), IPR013096 (Cupin 2, conserved barrel), IPR003313 (Transcription regulator HTH, AraC, arabinose-binding/dimerisation)" /note="Predicted" /db_xref="GOA:A8WMD5" /db_xref="InterPro:IPR004313" /db_xref="InterPro:IPR011051" /db_xref="InterPro:IPR014710" /db_xref="InterPro:IPR027496" /db_xref="UniProtKB/Swiss-Prot:A8WMD5" /protein_id="CAP21639.1" /translation="MAYFMANATRENCQDECRLSPNRDAVEEDLKKIGVECTKVDFDD ANVQEDLDQLIKKYNMNYHDEIHICRETMPNFDEKLKIFFEEHLHDDAELRVIKHGAG YFDVRAKDEQWIRIPVRRGDFVFLPPGIYHRFTTDRSEDVVALRLFRNNPKWTAFNRS ENGDKQPIREQYLKDVSA" CDS complement(join(549319..549385,549905..550157, 550587..550747,550793..551058)) /gene="CBG00143" /locus_tag="CBG_00143" /standard_name="CBG00143" /product="Protein CBG00143" /note="contains similarity to Pfam domain PF06966 Protein of unknown function (DUF1295) contains similarity to Interpro domains IPR016636 (3-oxo-5-alpha-steroid 4-dehydrogenase), IPR010721 (Protein of unknown function DUF1295)" /note="Predicted" /db_xref="GOA:A8WMD6" /db_xref="InterPro:IPR001104" /db_xref="InterPro:IPR016636" /db_xref="InterPro:IPR039357" /db_xref="UniProtKB/TrEMBL:A8WMD6" /protein_id="CAP21640.1" /translation="MIQLEEETILTMAWLMIASAIVVFAALRFGLTAGYGRYTNTARL GISPRLAWFIQEAPSFFIPFYYLFNGTSNSGHYLTRVFLLHYFNRVFIFPLKIRSTTV SPLYIMLSAIFFCCYNGFMQGYWNAFYQPEEGALTARHYIGSLLFFYGMYINHKADRI LFNLRAPGETGYKIPEGWLYEHISCPNYFGEIVEWTGYAIMAWNLPALAFAIFTASNI GPRAISHHAWYKEKFPEYPPHRKALIPFLL" CDS join(554322..554372,554418..554468,555251..555409) /gene="CBG27896" /locus_tag="CBG_27896" /standard_name="CBG27896" /product="Protein CBG27896" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEJ1" /protein_id="CAR98321.1" /translation="MENAVEVQTMNLTEHILDVLRQAHFVIGQRLQLINQNPNGEQSE LYQKLRIQLAFIDEMMRLGRRPLSVEDQVWLKDALKKVSFFE" CDS complement(join(557189..557311,557356..557551, 557598..557978,558027..558241,558285..558482)) /gene="CBG27897" /locus_tag="CBG_27897" /standard_name="CBG27897" /product="Protein CBG27897" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEJ2" /protein_id="CAR98322.1" /translation="MMKHKHPSTSDGSVKLADIVENVIHRIKDTMKITVSLKRMKKKT SVEFLTKEMVTLESLCKFYLEEGKLDIPSTEETESIVKKISFALEYVEAHELLGEIKD DFNELKKLEFAIIREMLQQIPKEEIINTELRALKARMEIADQKSCDSVSSFHLTLRTI KRQANNTLAFANVCQNAMALPDYEASEEILETCANRKEMAQKAIKVADNAQEQVKKIW GNFKTRVRIDDFKTKEFENKLPGEMMKNVEKVKKDVSKFNLKIQTKDPKGLVYLGAFR MYVADVKLLISYYAEAAKKHKQGLGELLDAYYDFNAVRKTNELGRRKATATLEKLQKT NSKMEELGIVVHETKQTVQENCINAGGTEHERVLIF" CDS complement(join(561630..562012,562060..562533, 563763..563896,563951..564097,564147..564317, 564572..564703,564757..564939,564993..565329, 565372..566137)) /gene="CBG00148" /locus_tag="CBG_00148" /standard_name="CBG00148" /product="Protein CBG00148" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMD7" /protein_id="CAP21641.2" /translation="MFPTSDYHSVVPLMFCDTSNSNQIPMNWQNTSNTMNHQDNRYSS HDGYEQQHFSPALSMNDSDTDFQMWTPQNQKQQQQNFNHWMDPNVPRDYSGMLPSSRG LPQNMIFTGQQRSCTIRSNLDTDSSLINEKEQEMPYFSENQNGQIVEANQDENFQDSK LSSPSKRVFENMDQATSTSTNDQPDEEYAEVPPLGFYFPLIIRFSDREPAHIENLTHE QLISLSQQAVHNVKLLEQDMRKLKKENERLVEELEAKAKKFGQNNVSTVSASTEVHLT DVLSPDGIVKYMEGCGLVFENNREWQDRGVPTEIRKTITKCEPERQQVQILELTASQL WFQSQKVKRKFSICACDYCCSDEENVNPVAEKELIVNEEKTGENTQAVTGSVEQQSEG DTPAELCDSAKKELLELEYNFNDAQEKIVNPVVDKELIANEETTRENTQASTERGTQQ NEGEIYSDLRDSAEKVVKLPEFYLSETASDEEMDQEVDEKTNEEKESHILNNSDYVYD KEETTKVISSLEAVVGGEKEQIGDVMDTKAKKETQTANAGQKSATKQQKKKAKNKNKN KNLKKKQEPSRNESKEDDKPLEMAIKENEDFLIMKSMITQYFAFVGVVNFTYFGFVKK RESLHPFYDKILHFWQDDLAHVFDPEEDEVEGAVSVHLDQRIKRYSTQKTAEAKKLGE FYSYIRHMLKESLFTRHMVLKDMCFVLGKADVEKDEEYAQLYYEMVRDFYIWQPQVFD LRAANIEDLSFSDLEEKEKLFFVEVINAEAKTMSRTIFESKIFVKAKNKDAKLKIAYN IAISKLGKPKEWEAELTKELLQTRRDCWANLEIATKDKSKYVSFYNTLLEVDSYILHT DMFMLNTMTALLAKEGKSQWILETTFMEAWFGFKCRPILYVGSDMELRRVAI" CDS join(568248..568307,568451..568651) /gene="CBG27898" /locus_tag="CBG_27898" /standard_name="CBG27898" /product="Protein CBG27898" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEJ3" /protein_id="CAR98323.1" /translation="MAQPANTGQLVRLNCTPHRIYADRRDQTVFLQYQYANFLLMYAT WKISQEPWSQEAQNNLAAIREQSVRLENYFFNTYTLRDVLRA" CDS join(571810..571875,571923..571973,572018..572191) /gene="CBG00150" /locus_tag="CBG_00150" /standard_name="CBG00150" /product="Protein CBG00150" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMD8" /protein_id="CAP21642.2" /translation="MFDLKHLELIFGTKTNFPEFQINKTRMNIQRLTLIRNTAVQCGA TALYLNKLDRLIELNCTIIRLGGQPLCHADLVVMWQTVMEIRGIEALLEGFC" assembly_gap 579207..579811 /estimated_length=605 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(580855..580989,581037..581225) /gene="CBG00152" /locus_tag="CBG_00152" /standard_name="CBG00152" /product="Protein CBG00152" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMD9" /protein_id="CAP21643.1" /translation="MDLPPPIPQAIDWSTVFGTPTNFPDTQIINNRIEANRYYFIRTV VAGIGASAEHLAKLDRIVVLNLALAHLGKKPLCHADLVVMWNTAMEIKKLEAELKAAG EEALK" CDS join(589882..590016,590062..590250) /gene="CBG00154" /locus_tag="CBG_00154" /standard_name="CBG00154" /product="Protein CBG00154" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WME0" /protein_id="CAP21644.1" /translation="MNPPPQLPRATDWINVFGTANNFPESQIMHNRLEAHHFHFMRTV VAADGGSADRLAKLDRLIALNLTLARLGEKPLCHADLVVMCHTAMEINKLKAELIAAG AKPQE" CDS join(591404..591517,591574..591674,592468..592679, 592733..593052,593104..593430) /gene="CBG27899" /locus_tag="CBG_27899" /standard_name="CBG27899" /product="Protein CBG27899" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEJ4" /protein_id="CAR98324.1" /translation="MSVLTFDAFAYGITNFDTIGEDELSKLEATKFSQIKDIEINMKS IIQILTVIKNLENELNVSTTKFFKIPDQFRYMGGHFAIDHKVKINAVLDADYTAHYDN EFRICLKILAQVRIDLTKACEESVKNLDFYNPNDRKEMELCVKLYYDVGFCNLAKWEV AVKILKNLFDSKNAMGSPVDSTQDVATVWNSYHSLDLDSGRNFVSNSPVNLNPVPSKS YIPPHMTRRKRNPFVKCYSTGQMLNSRLNRRVIPKSSIVDFNFNSNINQSLDLNPLSN SDQYSSPYMESPPPLSVEPQIPGMYLMPKNSDAPVYKLVPDGLAPEGWQNDPAWHQNV YKIGGTIEYQGKDYQMAKTWKEL" CDS join(594437..594544,594591..594698,594744..594818, 594863..595044,595089..595320) /gene="CBG27900" /locus_tag="CBG_27900" /standard_name="CBG27900" /product="Protein CBG27900" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEJ5" /protein_id="CAR98325.1" /translation="MSTNLEFEQLSEDERLLFMGRVDAAIEAFDENIDSLKMWKRDFS EHFFNEPIYWSLEVKLGLSELRSFLENKNCDLTTLIDLEIAVCEIQQYKLNRIGRFAQ ETLSPDGFTAENIFVTYFAWEGLKNGRYPTRESDMVEVAFNPRKDSKFFRVFSIKKLD LISNSNWELERSIIVEPAEEAEPVLDRRDHLVRHRSISVPSTGSDGDLEYTILEEGGF EEFEEVITEALDDQSD" assembly_gap 596478..596598 /estimated_length=121 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS 601624..601932 /gene="CBG27901" /locus_tag="CBG_27901" /standard_name="CBG27901" /product="Protein CBG27901" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEJ6" /protein_id="CAR98326.1" /translation="MQSVSSPPTLEIQPKLEPLSPIPTPPPAEQMPSPPPQVSKVPMA IVKPEFSLVPVRSGVPIYHLVHEGPAQPGWELKGEWTTFKINEPIYYKDDYFMLKHNH " CDS complement(join(606960..607337,609108..609230, 609357..609407,609457..609579)) /gene="CBG27902" /locus_tag="CBG_27902" /standard_name="CBG27902" /product="Protein CBG27902" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEJ7" /protein_id="CAR98327.1" /translation="MVPDFESIMGETYHQQFAEDSILNLNVDEMRMEKLLTKNDISCL KRLIVKFRLHLKEGHENIEQNGKGDILLDHAIFINDLMIKRTEALQAAAKHEKDKNKR SEHFMVTVSLFKKGLIAFEKQQVPLRRHLARMAFAKTDEGAAYFKQKAREEMAAIIKE RVDEYRRIEAEKEAQPKEITVKDAPKKLEKVVEEDQKDLESEEENRVIIKEEKGEIKE EQPISS" CDS join(613303..613452,613963..614079) /gene="CBG00164" /locus_tag="CBG_00164" /standard_name="CBG00164" /product="Protein CBG00164" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WME1" /protein_id="CAP21645.1" /translation="MSNDCKLIKDLRDKISKLVAVVKEHRAEAKQVNEPPKPEEIEME VFYRRPLVTIKEPAYEERWSVIRRRPGTPTAPIDIIYPVREQDW" CDS complement(join(615347..615591,615641..616158, 616490..617154,617465..617995)) /gene="CBG00165" /locus_tag="CBG_00165" /standard_name="CBG00165" /product="Protein CBG00165" /note="contains similarity to Pfam domain PF00856 SET domain contains similarity to Interpro domain IPR001214 (SET domain)" /note="Predicted" /db_xref="InterPro:IPR001214" /db_xref="InterPro:IPR026489" /db_xref="UniProtKB/TrEMBL:A8WME2" /protein_id="CAP21646.1" /translation="MAPKRKTATTSEELPGKQKRVRQVKRNQDDEVEKEIGFQCFYRS NMPTQDEIHKAVEEVSKMAVEVLKEGKTITNPDLAAVLLAEDKIQPNEEKMEDSDDDS MFEMSMDNYVEDRKFKKNPVEASFSKALPTDGNGNPPLNFFFPTISNVDGLIETQLSN FPDTNQDVKLVRSQILEAYENGVHGYRLDEHEHSEQILFEIMKRLIPGTTNADLLYFA IHCVFPNIGTQFEISKMFPKLCRKYASEDSSLVGLERWKAQEQVEDLPVLPQLPEPEV LQHFIVKQMNLKIEKDDERCSDDCYKDLSPGYFEKMLKKLDSRNPSDVLLYVAKSKVT NSKTAAFLNDLLLRSETWITGFCEHARTSKENTCAKWFELLMDNSTIPDDRLYKTTMK KYKDDQKGFNKRLNRFYSAVWTKKDLNVHPLTPCNHVGSCGPNVPHCSCNKYCTVACQ CRYDCGIKFPGCNCGEVDGQSCGTSSCPCVLLKLECNPLTCNTSSRTSGNAPCMNAEL GKGAMVVIHVKRSGVPQIEGNGAFLGQSVKKHECLGEYVGESIPDEEIERRGAEYHFS CSYIFNSGQGLGTGVDAMRTGNNLRFVNHSDKPNCEVRNMNVNGRVVIGFYALKDMEE GTELFFNYGYSEFHKKHFFGSASSSKKK" CDS complement(join(620913..621059,621114..621230, 621278..621334)) /gene="CBG27903" /locus_tag="CBG_27903" /standard_name="CBG27903" /product="Protein CBG27903" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEJ8" /protein_id="CAR98328.1" /translation="MNLDIYRTLMKMSVVIVRLAKKYRSTREIAYKELKKSVEASRRK VERAYALDTRWYKIGGKSEKIMAEYEEACREFHRDIFMVEIKVNPDNAEETLLKWLRV NDQL" CDS complement(join(621841..622083,623055..623171, 623220..623228)) /gene="CBG00167" /locus_tag="CBG_00167" /standard_name="CBG00167" /product="Protein CBG00167" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WME3" /protein_id="CAP21647.2" /translation="MCANAMFILTNETIYRVTMETIDNTKKALKKVIRHGAGIFTTEK RTTKLLESYAQHQKAYDSMMFKMEIAMMPSRALNVINTWLEDTLGDQDPAAVLICENH LYSSRIVDCGMDCPCMATSV" CDS complement(join(624154..624495,624593..624703)) /gene="CBG00168" /locus_tag="CBG_00168" /standard_name="CBG00168" /product="Protein CBG00168" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WME4" /protein_id="CAP21648.1" /translation="MHLITNETIYRVTMECAVKAIKILKKVISRGPCRYKLGSKTDNL VQLYKKIHDEYKDMILKMDIKMMPSKAEYLIECWLKKDAAQKAAQEHKDRKKERKAAR VAAAVSRQSAGSPTNSYTQAIYSNIMKPRVEVTYENLPAFYCSDEIII" CDS complement(join(628373..628508,629080..629153)) /gene="CBG00170" /locus_tag="CBG_00170" /standard_name="CBG00170" /product="Protein CBG00170" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WME5" /protein_id="CAP21649.1" /translation="MQYLTIVLLFVLIAVCPAQWDNSYWWYNQQPTQAPANNWFGGSQ SDDKGNMWHGSDNAKLMIFAKSSWP" CDS join(630014..630126,630171..630357) /gene="CBG00171" /locus_tag="CBG_00171" /standard_name="CBG00171" /product="Protein CBG00171" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WME6" /protein_id="CAP21650.1" /translation="MNTFFIFTFLFALVAFSSAQQWTAQQLAAYRQQQYYNWWYNQQR MQQVQQQPQFQQPAPAQPVPVQSPFFGNAQSDSKGNSWHGDDNAKLFLVARSSWP" CDS complement(join(630946..631014,631063..631146, 632991..633149,633349..633480,633545..633619, 634166..634291,634336..634461,634687..634769, 635127..635130)) /gene="Cbr-tsp-11" /locus_tag="CBG_00172" /standard_name="CBG00172" /product="Protein CBR-TSP-11" /note="C. briggsae CBR-TSP-11 protein; contains similarity to Pfam domain PF00335 Tetraspanin family contains similarity to Interpro domain IPR018499 (Tetraspanin)" /note="Predicted" /db_xref="GOA:A8WME7" /db_xref="InterPro:IPR000301" /db_xref="InterPro:IPR018499" /db_xref="UniProtKB/TrEMBL:A8WME7" /protein_id="CAP21651.2" /translation="MGNNTRRMPLSCTARALKFSLFIFNLVFLLCGLICLGIGTWLVL DKYAIDNLAFATAKVQGYDQDAGLRDLATKPTAVRQFGYLLFGGGLIVIIVAFLGCCG AAKEWRPLLCCYSSCLMLILAIQIAATIYAFLHSHMFENDFRDILHSSLKMYNGTDNM KVTSDGQDGLLVKTAWDKIMIEKSCCGVDSKIGEFNSSGWYHLNKGRYQFPPACCPSD EHGRLRPYCNTIMRHSHGCITPLYREHQIHLSAISSILVVLTILGVCLLFVGIQLFRR VRIEMLSYF" assembly_gap 631916..632228 /estimated_length=313 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(637273..637476,638088..638251, 638875..639014,643830..643915)) /gene="Cbr-tmbi-4" /locus_tag="CBG_00173" /standard_name="CBG00173" /product="Protein CBR-TMBI-4" /note="C. briggsae CBR-TMBI-4 protein; contains similarity to Interpro domain IPR006214 (Inhibitor of apoptosis-promoting Bax1-related)" /note="Predicted" /db_xref="GOA:B0K057" /db_xref="InterPro:IPR006214" /db_xref="UniProtKB/TrEMBL:B0K057" /protein_id="CAP21652.1" /translation="MILPALTLYTSSGYLQVDSVENEWFHVTSGWVVFPNLMGSIALI IALHVYAREVPLNYVLLAAFTAVQALTMGCVVTLFEAKVVLEAAVITGIVVASLFAYT LQNKHDFSVGYGCMGSLLMVLLWAGIFQIFFMSPAMNFVINVFGAGLFCVLLVIDLDQ IMYKFSPEDYICACVALYLDVLNLFIRILQIVAEANK" CDS join(644686..644796,645292..645453,645500..645598, 645684..645830) /gene="CBG00175" /locus_tag="CBG_00175" /standard_name="CBG00175" /product="Protein CBG00175" /note="contains similarity to Pfam domains PF00036 (EF hand) (2), PF12763 (Cytoskeletal-regulatory complex EF hand) contains similarity to Interpro domains IPR018247 (EF-Hand 1, calcium-binding site), IPR002048 (Calcium-binding EF-hand), IPR018248 (EF-hand)" /note="Predicted" /db_xref="GOA:A8WME8" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR018247" /db_xref="UniProtKB/TrEMBL:A8WME8" /protein_id="CAP21653.2" /translation="MFDTDGSGAIGNEELKQAMISIGLHANKAEIDNVIKEVDADGNG EIDFEEFCACMKKSQNIVKSTNEELIRECFEIFDQDRNGIITENEFKYIAKEFGDYDD ELAEKVFRELDVSSNGHLSADQFATIVEDYLLSDPVKYETDGGDSDVERYEDRRDDRA SPMPNHLPTVQE" CDS complement(join(645955..646067,648041..648162, 648252..648310,648722..648724)) /gene="CBG00177" /locus_tag="CBG_00177" /standard_name="CBG00177" /product="Protein CBG00177" /note="contains similarity to Interpro domain IPR006214 (Inhibitor of apoptosis-promoting Bax1-related)" /note="Predicted" /db_xref="GOA:A8WME9" /db_xref="UniProtKB/TrEMBL:A8WME9" /protein_id="CAP21654.2" /translation="MVNLLEDHDDSDYEDEVHVKRNPQMWPSNLTNSSHAEAGLLEAS DGILPGCVGQANRMIRIAFLRKVLGIVGFQLLFTIGICVAIYHIPNSKTFLQNQ" CDS complement(649254..649391) /gene="CBG27904" /locus_tag="CBG_27904" /standard_name="CBG27904" /product="Protein CBG27904" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEJ9" /protein_id="CAR98329.1" /translation="MFHALCTKADEIAETVAKHEEKQMEESEYVQKVTKRGRSDKRFI E" assembly_gap 649629..656567 /estimated_length=6939 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(659457..659696) /gene="CBG27905" /locus_tag="CBG_27905" /standard_name="CBG27905" /product="Protein CBG27905" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEK0" /protein_id="CAR98330.1" /translation="MQADAAHKVNCGKGPQGDKRLETKQKRRRRGSERARCYEEEEVN CYVGEKGTTRKKSRRLRCRRTVCKGPGLVMTTLVH" CDS join(660073..660265,660341..661003,661181..661257, 661406..661660,661769..661842,662057..662208, 662428..662600) /gene="CBG00178" /locus_tag="CBG_00178" /standard_name="CBG00178" /product="Protein CBG00178" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMF0" /protein_id="CAP21655.1" /translation="MGQTNRKQKPECTNAEVAEKVEKHEEEQDEESEYVQENMKTSES NENVDEEIKESQEALAKKEEKSDQEEEEPDVKKFKKTSKRTEASSRKTLSTVSQQKLE SFNTLLPRLKHDPENDISDEDFKKMFHALCTKADEIAETVAKHEEKQMEESEYVQKVT KRGRSDKCAADKMKESREVTSKKNEKQGTRDQQLKRTTKRFEGREQERWEESDQEEWE ESKPVLKKAKTKSKGNGVSNRKKPSASKLPRKLESLGALLHSLKHDPNNVISDDDLNK LFHALCPDTDKLYDSDDSIISEIDGLSAAELADGTARCREAMEYIRALPEKMKAVDVI LNQGNETKKEREDRKKAIREITHGLKTKDEKARAERIFQREKKKLEKSFATVVQVFDK DECKTLCSDSELPLVTTRHLDHFWKQWPKLKEGLYRGNFFTNGQTKAQYLKTRIAKIF EHKEVLEVLATDRYGFEFSTREAILVLAKYYNPNPLKQDNGLLQINIKELAAAAYIAF RSAGREMPKINDPLRMALGY" CDS complement(join(665037..665183,665227..665325, 665374..665586,666161..666287,666332..666474, 666521..666745,666789..666915,666961..667097)) /gene="CBG00180" /locus_tag="CBG_00180" /standard_name="CBG00180" /product="Protein CBG00180" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMF1" /protein_id="CAP21656.1" /translation="MTSENVRYVLAIGVSHTEIESGFIVFPDSEFQEHGVTRVLISDV DCSEDIIGKWMYLKTEKNNLSTTFHPVRTIYDKNPTRIVDGDVQVRASLQLKCVKGSR VFFTHPFFGSVAGNLSRGVSVDRLKTEPELWIQPYLCNGIGWKIADERYQDYFIPSQQ NHNITGCLEPYERYWTEGVVTKKFDKVGDTIYYVCSPSSPEGLICLHQKYCPIDVEMV GLHVSVCVDWRHEVKRKVKLIPNKRKTRVTDGEAELQICFQYKETECGKPRMEFQDEN HGSIMIWQSMLPNYKENGWYIGWIRHAPCFKMEELWIMSSCHQIEGPFASKLIQDEQA TPAAAAAAAAEEKDLEEIAKMKRILAMMIPKVNALLKHEEVVVAMQLANLEEYEELVE IAAKHGSVDPRKK" CDS complement(join(669469..669562,670099..670196, 670321..670335)) /gene="CBG00181" /locus_tag="CBG_00181" /standard_name="CBG00181" /product="Protein CBG00181" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMF2" /protein_id="CAP21657.2" /translation="MSATTSPSSSNNIPKSQSCEEIPDINQRRRHPSLGFLEVSTGRG CDSSDNPDRRGHESKEKRRRFNGR" CDS complement(join(671699..671893,672207..672476, 672522..672614,672660..672806,672862..673346, 674125..674209)) /gene="CBG00182" /locus_tag="CBG_00182" /standard_name="CBG00182" /product="Protein CBG00182" /note="contains similarity to Pfam domains PF10324 (Serpentine type 7TM GPCR chemoreceptor Srw) , PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10328 (Serpentine type 7TM GPCR chemoreceptor Srx) , PF10323 (Serpentine type 7TM GPCR chemoreceptor Srv) , PF10320 (Serpentine type 7TM GPCR chemoreceptor Srsx) contains similarity to Interpro domains IPR019424 (7TM GPCR, serpentine receptor class sx (Srsx)), IPR019426 (7TM GPCR, serpentine receptor class v (Srv)), IPR019427 (7TM GPCR, serpentine receptor class w (Srw)), IPR019430 (7TM GPCR, serpentine receptor class x (Srx)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8WMF3" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8WMF3" /protein_id="CAP21658.2" /translation="MSNSTSPNAAATVGNIAYCYVLPCICVIGIVGNITNLVVLASRR LRAVSYMYLRALAVADLLCMLFVLVFVSTEYMAKNGSTINQYKIYQIYQCHLMLTLIN WALGAGVYVVVALSLERYISIVFPMHFRTWNSPQRATRAIIIAFLIPAIFYIPYAVTR YKGKQRWDPIQNVTIYSMDDHPIYTTFYWQIYKWTREALLRFLPIIILTVLNLQIMFA FRKRQKMFQQLTKRKEQGTQKDDTLMYMLGGTVLMSLVCNIPAAINLLLIDETLKKRL DYQIFRAVANLLEITNHASQFYVFCACSTDYRTTFLQKFPCFKTDYANRDRLRSFVRR TQSVIQKQGSVEHTTNSKVWIMFKSKFQRDSLSHHSRKFSRHMPIEQDTVDIQLASGE QSTSGETCEADTLIKYGGSIQLCNDENNTTFL" CDS complement(join(687844..687981,689641..689943, 689989..690379,690430..690566,690624..691050, 691097..691318,691507..692009)) /gene="CBG00185" /locus_tag="CBG_00185" /standard_name="CBG00185" /product="Protein CBG00185" /note="contains similarity to Pfam domain PF00651 BTB/POZ domain contains similarity to Interpro domain IPR013069 (BTB/POZ)" /note="Predicted" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR011333" /db_xref="UniProtKB/TrEMBL:A8WMF4" /protein_id="CAP21659.2" /translation="MDEVHRDRLRRRYRLRRLRRGEGRANEGQADPQDPLAENPEEGN PAAGDAPPRQIRPRRVHPRRNWQDEVWQIFPEDGDMDDGDRQDDDALQLMERMNGDVH RPFLPREENHRQEPPQNGLEQLEEQLERRRSHRPHELPFPFITRGEFNISRSMIKECS KPWNNISWTIKYEAKVVDSNCHYGRFFVTFSGMGENAYKIITSLKITKVTVNTSDHIE QTLIFDKNHRTLMFPDIMLTSQSRVDHVMNSPHLNMIFTIHHAEKVDEFTYDGQSWPM SDKWVNYLDKCAVRMNTNQLHVHNPHLDLLLGDLKIGILSQNEAKAFYEFAGFLCHRW YIGTEKLHDILVNGFKLGFTEKWDLLDTPDSGIDFNAKALLPFYHDFLEEEPKQQIGF ETNSPSGVCQIFELRMNPKEVHCRTQVETMRFAREHRGQFTFYFEDTPKGTLLMMGAV FKLDGRQNAKMKITLFEHGVKKAVNTSYRIIHEQQRTYGTVVAHLSEEQLTILAKNKL SVGIQLHFHHTDANFIHTFRHEADFSSPYMMPGPCNGWIECNDGKKIGVNKEFVSKHS YQLNTLFNNNMFADCGLSTIKVNEASDIVLYCLEIMYHKSLAINFNNFKRILDLAGYW LSDTIKRYIEMAVVHTDKIDPADKLELGIFYDLDMIKYVARHPEYASSFNLNISEEER ACVAIPAGNELDGGPLGRQPVENL" CDS complement(694314..694589) /gene="CBG00186" /locus_tag="CBG_00186" /standard_name="CBG00186" /product="Protein CBG00186" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMF5" /protein_id="CAP21660.1" /translation="MSSQFTPIATDSVPDTTIPYSYFDTNSWNSENHNSNYLNTQSTD YSDYTLYSNYYAYYYAQFFQRLSSNVSIPSPTRIPQPVTDTMFPPLN" CDS complement(join(695895..696069,696116..696252, 696300..696492,696540..696659,696709..696828, 696877..696982,697104..697266,698244..698661, 698712..698833,698980..699102,699250..699422, 701521..701591,701640..702293,702341..702523, 702571..703490,703572..703679,704293..704361, 704924..705097,708915..709027,710955..711249)) /gene="Cbr-ajm-1" /locus_tag="CBG_00187" /standard_name="CBG00187" /product="Protein CBR-AJM-1" /note="C. briggsae CBR-AJM-1 protein; contains similarity to Pfam domain PF01753 MYND finger contains similarity to Interpro domain IPR002893 (Zinc finger, MYND-type)" /note="Predicted" /db_xref="GOA:A8WMF6" /db_xref="InterPro:IPR002893" /db_xref="InterPro:IPR038825" /db_xref="UniProtKB/TrEMBL:A8WMF6" /protein_id="CAP21661.1" /translation="MDTTSGRPRSPLDLPPPPPSAVLHPNAPPPPPPPLSSTEIVGNT TTTTTTHYTPKAWNDPSVTTAPKIPVSSLVGAVPLPSILTQKTSSSSYTAPSYPASTM SGVPSEIAPPPPPLVQSSSSAVSYQHHHTSSIPKSISSSREDLLSEHATSRSTVREIP VHRAPSTAPSHSSVFDYRMMPTTTTTYHHVETPSDEYYRREVMTRTIITRSTEALSQT PLGRPTSPLERYLPYTTTTTSGDGRTREEKTVDYKVTYHRDIEEEERRIREDQARRLQ EEQDRRAREEEARRLLEQRTREEMQRLREHQSLSERALADRERADKDRLEKERQQRQQ QEMLRRAEWERLEEQRLGAEEAELARRRALEKERLEREKAEEERRAMERLQREKERLE RERLEAERREKERLEKERIERERIERERIEIERIERIKKERIERERREREKEKEEEER LLKERLELERIERERRELELRERQELEIQRREAEDRERQRLEDEAREMRRREDERREA ELVADVQRQAEERERLRKRQEREEQERLERIRLEQQRIDMERADAERRERERKEEERR EFELVEAAKRKKEARDRARLEEMENERQREEEERRDRERREQERRNAAERERKRRQEE EEEIARLNDLQRAAAARAAQRNAEIERQRERDELDRRARELSELEMREKDRRDRERAI EEAQIADLRDRERRNQQIRENERREAAEREASRRLDDRRSRDKLDHLVRERTEKEKFE SEKRRLLAEKEAMNKKKHHLLSSETLAKLTQPMYYTTTREPEVTTKVERQVIERVDRN VWVEDLPYPSSQSAIGYLDNDENSRDRMYNPNDLNRNGSSRSRYQRAKTEKARRDFYS SSQDSADPVSDRFRKSIDDLTTRSRPEYRGPLLQKFHESEFRTTALNETDGLPYRRMG PSPYEQPFAKLLEETERRYAQYNSRASNPSIYQSSRYYYQDRHGQPKHTEVNTRAESV VAYERDSRRESPADQAHIRSRSADYLMDRRIREETEVPENQLQKTRTDALDQSPRESR ISEYEMRFRKSTEKLTVPDWYRENKPQSTTQTTTYRYTSGAEPITTTTTTTSTVNEPR QVQYAPPVPPQPAVVGNIGLPRGMFDRYKDDIEELRRSRSSLHQTSQEPSNRQGSTLS VGGTVSDQGHALPGYTVSEVPNAWNLQTSRTSRVVEVADTFVGTSSHEYGNFTNRYGG RVTIEEVLDSIFQKVAPTDPRRYAARSYPQADELFQGYSDGPGIYTNNYSVMRQVLKS PERAEHILQNEELFVRCTECHRTRELSAARLFFVSCKHCYTYYCSRECRHNNWPSHSG RCSFARINTLCKDVIMKVREDELAQGYMSKVAREGFSVNGRGSVNIRLSSPQLAQAYV SNGWKALSALPITQLLYYYTVNDLIAERKEPSLIALCKRYEPREKFILSVSIIADIEH CPTTPPPETRELSAVQFSSPRSRYEAIQNQDGPYFSEVAHNV" assembly_gap 711820..712036 /estimated_length=217 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(715286..715360,715632..715694)) /gene="CBG00188" /locus_tag="CBG_00188" /standard_name="CBG00188" /product="Protein CBG00188" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMF7" /protein_id="CAP21662.1" /translation="MISFDPSTSEIHTQKMSGFVVLADADRDQEEELVFNEERRKTVT M" CDS complement(join(<717692..717994,721462..721623, 721708..721857,723186..723270,724184..724248)) /gene="CBG00189" /locus_tag="CBG_00189" /standard_name="CBG00189" /product="Protein CBG00189" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMF8" /protein_id="CAP21663.1" /translation="MPSVMSLLQTDEILSSCSDDEPTTSGLIPLPSLIQSNMSVLPNF LHTINEEESDEVRSLTGSSLASPRTVVDRRLSNISLLSPTPDEDFEKQQEQQQQDEVR GSERRNSLEEERIVVGEPRTTRQIEITQSASEDDRLDLLKELAKIGKSNSGQMNTTTV DKQEEEIIDATGPGETTVEKKETVVVTSETKPEGDVEEPDYALVPAESEDENAAAAVK TVQNEIAEVMEVLEAPQKAELVTIPMTHSEPEDHKVS" tRNA 718795..718866 /gene="CBG28561" /locus_tag="CBG_28561" /standard_name="CBG28561" /product="RNA transcript CBG28561" /note="C. briggsae predicted tRNA" tRNA complement(719181..719252) /gene="CBG28763" /locus_tag="CBG_28763" /standard_name="CBG28763" /product="RNA transcript CBG28763" /note="C. briggsae predicted tRNA" tRNA 719407..719478 /gene="CBG28475" /locus_tag="CBG_28475" /standard_name="CBG28475" /product="RNA transcript CBG28475" /note="C. briggsae predicted tRNA" assembly_gap 719569..719657 /estimated_length=89 /gap_type="within scaffold" /linkage_evidence="unspecified" tRNA 720256..720327 /gene="CBG28913" /locus_tag="CBG_28913" /standard_name="CBG28913" /product="RNA transcript CBG28913" /note="C. briggsae predicted tRNA" tRNA complement(720575..720646) /gene="CBG28522" /locus_tag="CBG_28522" /standard_name="CBG28522" /product="RNA transcript CBG28522" /note="C. briggsae predicted tRNA" tRNA complement(720928..720999) /gene="CBG28635" /locus_tag="CBG_28635" /standard_name="CBG28635" /product="RNA transcript CBG28635" /note="C. briggsae predicted tRNA" tRNA 721164..721235 /gene="CBG28711" /locus_tag="CBG_28711" /standard_name="CBG28711" /product="RNA transcript CBG28711" /note="C. briggsae predicted tRNA" CDS complement(join(726745..726963,727509..727616, 728932..729024)) /gene="CBG00190" /locus_tag="CBG_00190" /standard_name="CBG00190" /product="Protein CBG00190" /note="Predicted" /db_xref="GOA:A8WMF9" /db_xref="UniProtKB/TrEMBL:A8WMF9" /protein_id="CAP21664.1" /translation="MTQKIQFSLKNDTFTFSKSCFKNPGQAGPRHNCMDIENLQSSNN RSTESRPPDGFHTFLHTAFSAILAFVLSLRVIVFATARKRLTNTAANPDIQVEEASSS SSDTSSDTEVVEEGVFVQVREIHIPNCSGFSLLPSIA" assembly_gap 731770..732335 /estimated_length=566 /gap_type="within scaffold" /linkage_evidence="unspecified" tRNA 732410..732482 /gene="CBG28499" /locus_tag="CBG_28499" /standard_name="CBG28499" /product="RNA transcript CBG28499" /note="C. briggsae predicted tRNA" tRNA complement(732600..732671) /gene="CBG28689" /locus_tag="CBG_28689" /standard_name="CBG28689" /product="RNA transcript CBG28689" /note="C. briggsae predicted tRNA" tRNA 732856..732927 /gene="CBG28229" /locus_tag="CBG_28229" /standard_name="CBG28229" /product="RNA transcript CBG28229" /note="C. briggsae predicted tRNA" CDS join(734322..734410,734454..735317,735371..735515) /gene="CBG27906" /locus_tag="CBG_27906" /standard_name="CBG27906" /product="Protein CBG27906" /note="contains similarity to Pfam domain PF07735 F-box associated contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /note="Predicted" /db_xref="InterPro:IPR012885" /db_xref="UniProtKB/TrEMBL:B6IEK1" /protein_id="CAR98331.1" /translation="MDIVPLFPPEFEWPENVITKIFLHLPLELLIRLILQFPEYRALF SAHQIHVDALKWRIYNYCYIRLKRGEETVMLHIKGDLRKRRRTPRIITMTSIEFEKYG FYRDTTQLDMCVDEDNLDSSNMELLKHLSEMLLPSLNVANFDLRFYPIDARVSFVHCF IFKMIRRFRILEFFQLRPKECETNADHNLRARRLILQYKYMQNEIEVDHLKVHFTEMP LFTEIPLRKGLDSRFMSRLYPLRTRNMTIWDTEFINLRSLLQMECENLTVSREEMRGS DIGALMKAWMNGGLRKLKTFYCYSREFQIDPEGFQGIPAKPTSTPPPPMFPHPEYWTR YALEIIRIEDGRSANVLWYEDEFWFYIIEGN" CDS join(736527..736636,737243..737803,737854..738094) /gene="CBG00192" /locus_tag="CBG_00192" /standard_name="CBG00192" /product="Protein CBG00192" /note="contains similarity to Pfam domain PF04719 hTAFII28-like protein conserved region contains similarity to Interpro domain IPR006809 (TAFII28-like protein)" /note="Predicted" /db_xref="GOA:A8WMG0" /db_xref="InterPro:IPR006809" /db_xref="InterPro:IPR009072" /db_xref="UniProtKB/TrEMBL:A8WMG0" /protein_id="CAP21665.1" /translation="MDAMDLFGGLSSDEEEENYPPTPKDSTLTLMAEMEMSDEDGDEP MEANDTDKTTSGSSPDQMVPATFSDKPTTSAQVKFFLSSDEDSMDMPDVKQMVKDSIS RLEQETKRKLMEAVEATKPITCMEPLVKKPKVEIEDLMIEQLPTVPEPMPMTSDVESV PQGKMDKKDIESVRIKSAVKQEEEKEEDNTAGKLDHDEKERLKMEVLLKNFSKEQFDR YEVFRQSKFQRTMIRRLMKKFTNNAPFPEGAVIAVASLAKMVVGDIVEEALDIRDAKE DEAEQPLQPHHIRQAYYKLAREGTIHF" CDS complement(join(752436..752835,752927..753154, 753226..753931,753977..754220,754264..754533, 754616..754753,754801..754915,755024..755088, 755139..755282)) /gene="CBG00196" /locus_tag="CBG_00196" /standard_name="CBG00196" /product="Protein CBG00196" /note="contains similarity to Pfam domains PF03137 (Organic Anion Transporter Polypeptide (OATP) family) (2), PF07690 (Major Facilitator Superfamily) contains similarity to Interpro domains IPR004156 (Organic anion transporter polypeptide OATP), IPR011701 (Major facilitator superfamily)" /note="Predicted" /db_xref="GOA:A8WMG1" /db_xref="InterPro:IPR002350" /db_xref="InterPro:IPR004156" /db_xref="InterPro:IPR036058" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8WMG1" /protein_id="CAP21666.2" /translation="MERIYIFLGLFSFVFFLEAIGGSYINSAVQNIERQFQMSSKTSG FMISVTSVIFHVLCSLLTLVQRETGQARWIGAGAILVSITYLMLATPNFLFPQGHHDI NTTAVAAQLKPTTAQLASNSTLRELLSYQLIRDRMSQDTYMSLMKLDDETTPIEDYHP IGKPPSSNNTSYTIDGWLIDEAIIEADKVINNGTSQNNLRNSLAMFIRRRVNSSEKDI KKIRISAAAPFTFCGTLTNSLRSIIKDSKCEEQSSNNYPFMVFFFSLFFLGIGRTVPW SLGVPLLDDNIKKKSLPAYFGAISSIRVLGPICGYMIGSFCNKFYYTLNPPNGLTPAD PTWIGAWWIGFLFIGTIALFPSTLLFFFPQGKQGSSSAVQLHDVHKEKLKKTVDEDRT IKMKLKDFGKSVKSVLSTKIYIGSVLGRVCDILAFKGYIVFLPKYLENHFGIPQYLVH RYMAMFGVFGFGLGAATGGWVTKKLKLNGRRAAMFVMLMSTVNVCLYSAKMFIGCDSI VNSIGLNNRYEESMNFLHHTKFFRETNYNFTRVCNSECACENARLYPVCDPTGYAYFS PCHAGCREAKQYGSNPLLDFTSCECAAGGVVSKKYCENTCKTSTVVFFLTVLPGSFVA GLGVVPAMLILLRSVPPESRSLSLGLQGMAVSLFGTLPSPIIWGLVIDAACLVWDKTC NGARGACAIYHPDRLRVWMHLLYVVIRTIALFTDIYVWKHAKHLNIMDEPVSEVRMSD SNSQLINSFQEKDNIRRNSIKMQAVQPDQ" CDS complement(join(758264..758351,760104..760278, 761690..761870,762139..762272,762358..762556)) /gene="CBG00197" /locus_tag="CBG_00197" /standard_name="CBG00197" /product="Protein CBG00197" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMG2" /protein_id="CAP21667.2" /translation="MSNSDVDRMMVPNGFPMFLKNPTTMIPNFHTIPFFGINPLIHLV NQMILAKKGQFVPMKQHSLLSLPHPQQILACANDPGVLLNTFQLPTGCFTTLLCFKPG GFKAGTNLELPDAWWRFAKESSHSANIVHSKVVADIECGAEIVICRTPPEDRKSEVEE PPTPDDVAAEDAPLPPSSTHNTTPCHSHFTGLSRNAIDYAFIFFMSTKTTDLMFAPFV KNRLASQAASTSVLIVEKPSLLMLPMIVTSDDPILLSSDH" tRNA complement(759919..760000) /gene="CBG28246" /locus_tag="CBG_28246" /standard_name="CBG28246" /product="RNA transcript CBG28246" /note="C. briggsae predicted tRNA" CDS complement(join(764819..764950,764998..765258, 765306..765404,765646..765726,765776..765879, 765924..765975)) /gene="CBG00198" /locus_tag="CBG_00198" /standard_name="CBG00198" /product="Protein CBG00198" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMG3" /protein_id="CAP21668.2" /translation="MGILHFWKYFTTSSPASGRPRIPSVDAVRNIQDFLAANSEEGNT EPEMNKKQEKKDKKEERGEPKKKLLKNEDTLTMKQTQTVQGKDHRSNNQAGNLLTPVG NNQRMRNGNRVATFEASGNLPSIPRPTCPPPAMAASIPRATQPPPGRHFEPEPTRRER LGSITSRFPQFWRSLQEQSQPRPPITRLPGTDEVDTEATLEPLWETRDSNNERFSFPY MVGSLRDVLDSEKKKKEEKRGGQK" CDS complement(join(775908..776021,776065..776166, 776437..776628,776676..776834,776885..777037)) /gene="CBG00199" /locus_tag="CBG_00199" /standard_name="CBG00199" /product="Protein CBG00199" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMG4" /protein_id="CAP21669.2" /translation="MSPADSMECFSTCSSLYSSDSEEEVVIKRPRIIRKNAGVNTDAP IAAPAPKPIVSEGVIRVVPLRPVFTVQLIPYQKHKEFDKKAPEFPTPIEEYHGIPVDL TNVQPPQIDTQEQLRIQRMRKCRLFEYLTEEQYRIVWHSVRADGEEPNVKYSVPFTTD KSNFLANGDFTTVPAETWAKTLEYAMQRSENIRDLRRTIIRNVPPRNDRSARRNAMRR YRNDNRIRRRFPHIISTYELD" CDS complement(join(781252..782064,782093..782262, 782309..782369,782416..782596,782648..782850, 782899..783031,783184..783606,783655..783731, 783957..784444,784516..784546)) /gene="CBG00200" /locus_tag="CBG_00200" /standard_name="CBG00200" /product="Protein CBG00200" /note="contains similarity to Pfam domains PF05649 (Peptidase family M13) , PF01431 (Peptidase family M13) (2)contains similarity to Interpro domains IPR008753 (Peptidase M13), IPR002052 (DNA methylase, N-6 adenine-specific, conserved site), IPR018497 (Peptidase M13, neprilysin, C-terminal), IPR000718 (Peptidase M13, neprilysin)" /note="Predicted" /db_xref="GOA:A8WMG5" /db_xref="InterPro:IPR000718" /db_xref="InterPro:IPR008753" /db_xref="InterPro:IPR018497" /db_xref="InterPro:IPR024079" /db_xref="InterPro:IPR042089" /db_xref="UniProtKB/TrEMBL:A8WMG5" /protein_id="CAP21670.2" /translation="MSQAISFVLLAGIVAGIGIVIASLVLNIIILGNVNDLTTTVNNN PVWHYSPAPQQNSSTGTVSNSAAYQQAANYLLNGLDDTIDPCQDFYAFTCNKASPVCL LNFEHRKFQFLQNTDLGKLGRSRLGTYDQAQIDVYTEIAAALDKIDVASTTTSKTERI TKAVSILRFHHLQAFDTCRKNLFNPPDKSQVVYDEITALFGGVPFLGEKLNPKIDYWM VAGQIEQKHAVGTLTYTIASSDYKDHTKNALYTGPVSLKQKNGKIVRVFFQPGLSLAR DFYVKPQYIAEVNARVTKVNSLLSAFAKNLKKTPGADVLLNAAQEVVAFEVLIAMASW PDDLLRNYQQQYNAYNIASATAAYSSINWASYLGQLFDGVATVKDQANYNIVVTEPSY FAWLNSVFAGQTSNQTVVANYMIAQLLADESDFISQDTARVASENNYIHYALRSGRGI GKHGKRDYRKMDLDGASQGCLDLLTAYMPYGTGYVYVKSKDQKYQVQSDVTNQTGLII SNFQNMINSLQWMDDFSKNRAHNKSDSLIKNFGWPTAMFGDFKDFTAVDQYNQDYASI IDIYTKDKSDIYGIFAVLKKGMESQQIGIFFNVCKKSNSIFRTNFLQSPAMVNAWYQP ERNSITFPYAAWNPPYYNFAYPQAYNFAGQGGTGGHELTHGYDDEGVQFGFNGELTDC AWNKCGWMDTNSSSGFIDMAQCVVTQFSTQCCPEKTGNVHCANGATTQGENIADLGGQ QAAYRAYRQYIAETRGGVEEDRLPGLEAYTPNQIFWITYGYSWCMKQSDANLVHQVCS FFICINLTIIFQLLTNPHSPAKCRTNQVMQDIPEFGKDFGCARGTPMYPEPANRCKVW VGQ" CDS complement(join(784817..785215,785259..786050, 786088..786433,786475..786604,786654..786748, 786796..787022,787071..787285,787425..787568, 787615..787695,787749..787998,788313..788645)) /gene="Cbr-snf-12" /locus_tag="CBG_00201" /standard_name="CBG00201" /product="Protein CBR-SNF-12" /note="C. briggsae CBR-SNF-12 protein; contains similarity to Pfam domain PF00209 Sodium:neurotransmitter symporter family contains similarity to Interpro domain IPR000175 (Sodium:neurotransmitter symporter)" /note="Predicted" /db_xref="GOA:A8WMG6" /db_xref="InterPro:IPR000175" /db_xref="InterPro:IPR037272" /db_xref="UniProtKB/TrEMBL:A8WMG6" /protein_id="CAP21671.2" /translation="MSVEWKSALRLQIEALAKRNDLHRKSSEEEIKKRIVDMDRRIVK LRELVSTSANDAAIFYLECVCHADETERLLNRESSVEKEKKWRKMKRKPSSQIGPTES RTVSSLPSVSPPDVIQTINVSTLEAQDQMPQRPHWWDQFQIYRRTDLLRFSKQNDRRE LWRTQKDFFLTCLGFMVGVGHTMRFPAKVYQHGGVFLHLSLGQYTGQAANTAFSKLMP IGSGVGWALVVIAIPVAVYYNIIVAWAIHYFFQSAKGLLLGDELPWETCRDVCLLVIF AILICIYSSEVLSLSTFGDFALGPLQSHLVLSLAAAWLLVFFGVFKGLGSIAQTMNVT ATVPYLLLSILLLRGISLPGANKGLSFFFTVDSTKLWKWQIWKSAAEQVFYELGIDAG PLISMAAFSRYRNNVYRDSVLLVIMDALTSILSGMVIFSFVGFIASESNSNVNDVLKH DPLYLSFTVYPGVTSFMYWGGLWATMFFGMLVMAALDAEFAWLEMIASAFMNHFSTKN KAVENRLLAFLCLVGFFFGLPLCAQVLKCILTQLILIFQGGIFVFHAIENLNANWNSF SLALLSVAIVCYVYGIDNYLTDISGMLRVPRIPISKAIRFRFKDKIVSILGPGGIYIK FSLCFICPVILTVLLVASVLGYQRISFAGRPIPIDYEIVAWVVMIGPLLVVPLVAFLQ VRQIRNEGKLLKSLFDTSEWRENPDDLLEPKDAYMKQDSKYESPPNRRRTPTIFTHRE NTYMYIDSRGPTVRSRVFPMGAPLDPYGWKLGRLRDHQQHIEEVESNYSEEGSTTNNS FMASTVKHNDDVELTLFGSPPAIMGDEDKNMVTKFSESMPVNYKCRNEQAAPVQSRRE PRLGRMARKTRRKRSSPSASDPPVPTSPLPPPPRLYHCKSEPPMMRSEEEHGTPKIIT PDGSCSISDSSDDSSDDNIRRATVIRRKTSDDDAFTQISTAESISITPLDFPRQRSLS SVAIYDQEQKNGRSKVLSQLKRPTPIVMPPK" CDS complement(join(789168..789380,789428..789601, 790126..790281,790326..790388,790433..790592, 790638..790915,790960..791062,791274..791374)) /gene="CBG00202" /locus_tag="CBG_00202" /standard_name="CBG00202" /product="Protein CBG00202" /note="contains similarity to Pfam domain PF01431 Peptidase family M13 contains similarity to Interpro domains IPR018497 (Peptidase M13, neprilysin, C-terminal), IPR000718 (Peptidase M13, neprilysin)" /note="Predicted" /db_xref="GOA:A8WMG7" /db_xref="InterPro:IPR000718" /db_xref="InterPro:IPR018497" /db_xref="InterPro:IPR024079" /db_xref="UniProtKB/TrEMBL:A8WMG7" /protein_id="CAP21672.2" /translation="MSTTPLILAPISTHMLVPHRLKEAFSKCWAPKGIRMDLVEIHLT DFQKMSDDQKQKLFRQIIVGNNQYAQLKTELNQAANALAVSIIFDRLDKNARSFFDKL KNYAMKVIEATPWAKTYQSIEIFQEALDKIELFTFRDARLAVELAMDKYNKIFDSCQS TVHGSYSSEHAETFCEIVACRHAKMFLDTRSEKVFDFGRYTVLGDKGSMLNHNDTAVF FSNDFLLLLSTTHLSDKFGAAGFVFLHEIMHTLVMGPTDFFNPLIPFWTTKSDGVAEQ AMKTCTTFPIMGCSPNATFEEDASDMAAYRIAWDFYRKSYRRKTVVKNYESLTKDQLF FYGASVLLRDSRAMTAMKTNEIDPHTNNYQRVNTLMSQMPAFGDAFQCKPTDKMIENK ARHCELYGNNAPAVKKRKFSSKR" assembly_gap 794734..795327 /estimated_length=594 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(796437..796637) /gene="CBG27907" /locus_tag="CBG_27907" /standard_name="CBG27907" /product="Protein CBG27907" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEK2" /protein_id="CAR98332.1" /translation="MFHHCSPYILLFFANKNKNFSDLSLLAVDNPAIRVLHVSKTTPK CSCFVFRFESRSQQIVEVVHEI" CDS complement(join(800969..801076,801425..801527, 801573..801742)) /gene="CBG00204" /locus_tag="CBG_00204" /standard_name="CBG00204" /product="Protein CBG00204" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMG8" /protein_id="CAP21673.2" /translation="MRLGFVLLIYIVGMSAASVSSIIQYDPIQTDFNITGTIKCHNAP QWCYTVQLLELDSTLNDVIGSVSGCEITNPSQDFLLEDWQLFDGVFDKCECTLAKFRT IGLIDHIQFSLKNSGINRRNVTLN" CDS complement(join(803357..803467,804154..804256, 804298..804440)) /gene="CBG27908" /locus_tag="CBG_27908" /standard_name="CBG27908" /product="Protein CBG27908" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEK3" /protein_id="CAR98333.1" /translation="MRLYLVHFLFIAGIIAPVVPTRFYISGTVSCQSSPPWCYTIQLL ELDSNFNDVITSVSGCELTNPNQKFSFEGWQPWDGLFDIRNVKTMQTYKMLNPTSEHV SKLAYSISSFYSDHNK" CDS complement(join(805643..805730,805779..805885, 805928..806030,806072..806214)) /gene="CBG00205" /locus_tag="CBG_00205" /standard_name="CBG00205" /product="Protein CBG00205" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMG9" /protein_id="CAP21674.2" /translation="MRLFLVIFIFIAGTIAPVNPSRFFIRGTVKCQDAPPWCYTIQLL ELDSAFNDVLASLSACELTNPNQEFLIESWQPWDGPLDWHFELELSIKHDCGIEITEE KQSMKLSFGQFYRLKPYFDKKVEIDFNKNTAKVIEIWDPKYWSD" CDS complement(join(809350..810252,811262..811340, 811388..811458)) /gene="CBG00206" /locus_tag="CBG_00206" /standard_name="CBG00206" /product="Protein CBG00206" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8WMH0" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/TrEMBL:A8WMH0" /protein_id="CAP21675.1" /translation="MDDVGDLDRFPNNFKFEEVVENESIPQSDVQMREIEFKCFALLG KGGYGKVYLAYVHGRTKYYAIKEVRKDIIVSKNKLKYVKNEFHVFKQLDSVFFPKFYA AFTNEKYLMFVMENVEGGSMRQLLERQGRLDQHEAKFYAAELFVGICYLHDNNIAHRD LKCENLLLTANGHLKICDFGLAKPNMTENTLCTEFCGTLLMLAPEVLQGLAYTRSTDW YAFGLILAEMFIGRSPMFLGDRKSTKQFIIEMPFDKLALPEMPFFAKNLANKLVTDRR KRLKPEQIANDQFFVGTDWNNVRLQLIPPPFGRNKFIQETRVLISGKGNEVGIVSESK QNLFEEFDYNVPGEFQ" CDS complement(join(814902..815012,815064..815378, 815427..815564,816046..816173,816309..816477)) /gene="CBG00208" /locus_tag="CBG_00208" /standard_name="CBG00208" /product="Protein CBG00208" /note="contains similarity to Interpro domain IPR000609 (7TM GPCR, serpentine receptor class g (Srg))" /note="Predicted" /db_xref="GOA:A8WMH1" /db_xref="InterPro:IPR000609" /db_xref="InterPro:IPR040298" /db_xref="UniProtKB/TrEMBL:A8WMH1" /protein_id="CAP21676.2" /translation="MKTIRKYPKQFNASFYLLYLWDSALNIFTCLTGFYMMRLNTVVS DDSMFAFLYRDVAKYVPMNVFTALSYHMAYVQYTTTALISFNRMTVIWKNERFERHWM KHTWLIMAVVLLVPLLDTHRFIHYKTEIQYDNDTESYEFVPSMPLADTFTFLLPTMVV ITVLSVCFNVCSAVLIKRLKSTLSKKGSTKFMVITAVTCIVQLLGCSLSLIRVNETEN FFARFLANNVLPIVSDALTHIQPFLLFGFSSVIRRQMMEMLGLRKPNKVNVNTIAMHV NNPSLTSHPL" CDS complement(join(818630..818728,819042..819229, 819277..819400,819447..819584,820307..820687)) /gene="Cbr-srg-38" /locus_tag="CBG_00209" /standard_name="CBG00209" /product="Protein CBR-SRG-38" /note="C. briggsae CBR-SRG-38 protein; contains similarity to Pfam domain PF02118 Srg family chemoreceptor contains similarity to Interpro domains IPR023795 (Protease inhibitor I4, serpin, conserved site), IPR000609 (7TM GPCR, serpentine receptor class g (Srg))" /note="Predicted" /db_xref="GOA:A8WMH2" /db_xref="InterPro:IPR000609" /db_xref="InterPro:IPR040298" /db_xref="UniProtKB/TrEMBL:A8WMH2" /protein_id="CAP21677.1" /translation="MRFLSDLQILNLSLCYEIPIWALYFISVAVIFLKWSTVKSSFLQ FYIFEFLTSILTFYNTYISLRLPNIAGTDDSLSRRYASKNETDFFHQLQFALQYHMAY VQYATTMVVALNRMAILQNAEYFEKKNRRYGWIIMCVIMLCPIAATYEVFLHDAYYKY IPSTNNYYVYSGCSSPDLLKQLFYFMCVCLSLTTVSNCFVFAKLCFFPLTPRNLETEF FFVSFMSSNTLTIGTVLTYGMRSATPGTLLFEVNKILLPVVSDVLSLNQPFYLIFYHK PARKLFFDIIHEVFRCLCCRKPRGIRPVDVTIL" assembly_gap 822266..825814 /estimated_length=3549 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(831970..832188,832241..832431,832479..832880, 832927..833101,833201..833359) /gene="CBG00212" /locus_tag="CBG_00212" /standard_name="CBG00212" /product="Protein CBG00212" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMH3" /protein_id="CAP21678.2" /translation="MATSSTASLEDLPDPGQETLVIYTKCREELDHSYVEEFKQIPKP EEHYPWFTKYIATYVCENFIMWPEAGKMRRPNDKTKCRAKIVDDVKALDIVKIHKKLQ HEVAKWMTHIKSSEIETEKFNEAMFDRYYKRRFEDLMGWINPTLEFIQDYQTDFLYLS DQDEELIHGHIEKIKDQYNLGRLGLKQKGSPPKDPESKVENAVVRELETELNRLKRRI LVADKYVQSLSSNPKESVCAQRKNERPLDKQIMDILREIVAAMDVWKKEFRDTESKKY VESAEFFLRHVITQFNVLREKEKQLGFQRNESFRKPEKMEKDHFFDTETSCVELSKIN ITLGNIYSRDAWITRELKKKALAEKAAAAKVQVQVQAKKNPNKKEKQ" CDS join(835915..836009,836426..836782,838354..838534, 838691..838822) /gene="CBG27909" /locus_tag="CBG_27909" /standard_name="CBG27909" /product="Protein CBG27909" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEK4" /protein_id="CAR98334.1" /translation="MSKNKQETIEWNIQIYKQEAEKMDALVKERFKLYMKIEAVREML CVIDITETFDKEFDELLKSNNLEEESHDQPSQENGSPPAYLKPLKAIDAMLNTMEKRA ADRLESILTAHRNNWPILDGDGLLALSIEEHLTAAEETLAKWQKKYSGKRVSRYLNAA EYYIKHVIEQLREYFIIASDYECYRKMAIRRTEEETRNKMFIEDTVKADEMILDVEKH LAETFGCTSEKLRAAFEFDTTSDNSPKNDSQVAEQM" assembly_gap 837542..837702 /estimated_length=161 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(839307..839516,839559..839749,839797..840198, 840245..840419,840813..840947) /gene="CBG00215" /locus_tag="CBG_00215" /standard_name="CBG00215" /product="Protein CBG00215" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMH4" /protein_id="CAP21679.1" /translation="MAIVYIEGLPDPSPDTLAVYTKCREDLNQLYIEAFQQIPKPGEH FPWFTKYLATTVCENFIIWPETVKTKRPNDKSKCRSKIVETIKVMDIPATHKELQHEV AKWMTHIKCSEIETASFNEELFDRYYERRFEDLMGWIDPILEFIQNYQSDFLYLSDHD VETIHGHIEKIKDQYNLGRLGLKQRGSSPRDPESKVENPVVRELERELNHLRTRIMIG HTYIESLAQNPRESVAAQRENEAPLDKKIVDTLEEIVEIVDAWKKEFRDHESQKCIES ADFFLQYVTAQFKVLLKKETELGFLRNDSFRKPEKMQKDHFFDTETSCVELSKINATL GTIFTRDAWITRELKKKALSKKATVNAQVDKKLIKN" CDS complement(join(842204..842962,843097..844101)) /gene="CBG00216" /locus_tag="CBG_00216" /standard_name="CBG00216" /product="Protein CBG00216" /note="contains similarity to Pfam domain PF07245 Phlebovirus glycoprotein G2 contains similarity to Interpro domains IPR009878 (Phlebovirus glycoprotein G2), IPR020901 (Proteinase inhibitor I2, Kunitz, conserved site)" /note="Predicted" /db_xref="GOA:A8WMH5" /db_xref="InterPro:IPR009878" /db_xref="UniProtKB/TrEMBL:A8WMH5" /protein_id="CAP21680.1" /translation="MTTLRKWKSQENPMTRSCLVRNGIVLRPTRIPYADYSPRKVFSR SLPRQSAMGYTIVRTSPQTMDRHWQPLERTTMDNSASILHRYLLKFFLKKRNQHHEVI IALVCIFLIGITSECTEIASFQAADSVCVFRDGNEMCMLNKVSILNLRPNGSVGCFND LEGADVLHTVEVKVQAIKSTCQSHSHFYARDYDLHHQYSHRCAGAGSCVSAKCSKTTL QDTIEELSLDSRKSPGFTKCFEGCGCVTCGGCFRCDSSCLFNRVYATTRSNDIYEVFI CQREKQLWTSPSVSEAKFGMWISTTEFLTKFQAQMFPLPSLVFPLHRHQSMEQHSSKE LFDKSLCTCMGQGTYVDCLCNRISLEDIVKRTLLPRLETDTIIREHEGRVTTSTATTA LVNLQLNFANQTISRAAREGACKATSQEVVGCYSCNEGATAKVKCFSDLDDSISVLKC LSSISFLECSKIGVINEVFLYTSSADLSWDCEVSCGNGSSSITMRGQLQDQLRFEKKE YGTDRLQSVIFDSIGTHLANAVTTVFGGLLKWISSISVISLVFLISLVFIIYRVLSRA LPFPWRVSPLVRKNKRLEEKM" CDS join(845713..845919,845967..846163,846205..846588, 846635..846821,846872..846976) /gene="CBG00217" /locus_tag="CBG_00217" /standard_name="CBG00217" /product="Protein CBG00217" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMH6" /protein_id="CAP21681.1" /translation="MCDFPPPSHPYLSEDYWRKKFEKHLKVEWKPFFKSTVQPNSFDE SFMHYISTKVCQNFVLHNCKPQVEESVSSVVEQCPEEILNDLKQLDLKTVYDKVLREI IGWKIMIIEVESNMQEFENQGIREKWPERLSMWLHKQIEDTSETIMLMDRRPYDPTKS EIDKITKHMDEVIRHSENLARIQNGGNTYEYLRRKPCLDLLDNALQCMKIRTALLGAS IEVVKVHAARFPEPFRPSDFAAPIDEILEKIEAARRRWSIKYTNNQSLKYSETANYFL KLVSLQFVMMKKSEEEFRENWHNRPDYNVYEEHQKTIDAMRQVTKTAFILHETRMTLV EIFLPDQIETLKLEIKEIEDRANEE" tRNA 850563..850634 /gene="CBG28827" /locus_tag="CBG_28827" /standard_name="CBG28827" /product="RNA transcript CBG28827" /note="C. briggsae predicted tRNA" tRNA complement(850923..850994) /gene="CBG28255" /locus_tag="CBG_28255" /standard_name="CBG28255" /product="RNA transcript CBG28255" /note="C. briggsae predicted tRNA" CDS join(855695..855898,856762..856902,857133..857465, 857964..858131) /gene="CBG27910" /locus_tag="CBG_27910" /standard_name="CBG27910" /product="Protein CBG27910" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEK5" /protein_id="CAR98335.1" /translation="MNDLSSAMEEVRLSSQPIDMEESSEAVTMEEDSNMSVDEKREQE YKLRVLEALEKGVQHQLKKKKDLGVDILSDLGVLGQMKECILDKNKYIDKKLSEKALS DSALSNYSRQNAPSELVHMPDMQNERDATDYYEMTPGGCDVHVIRVFMTPTDKSVNQL EFSVSHHTHMILDLNSPEDGIKLLEEVKQMIKYLVQHGDYSINYQNTIIARLEQDREI IATTKPSRERREAINFLHKHYDRYEADKKRMDARMFCGPVFNRRLFKYNQSKGLELRH LSDKK" CDS join(858617..858676,858720..858845,858994..859167) /gene="CBG00220" /locus_tag="CBG_00220" /standard_name="CBG00220" /product="Protein CBG00220" /note="contains similarity to Pfam domain PF00367 phosphotransferase system, EIIB contains similarity to Interpro domain IPR018113 (Phosphotransferase system EIIB/cysteine, phosphorylation site)" /note="Predicted" /db_xref="GOA:A8WMH7" /db_xref="InterPro:IPR018113" /db_xref="UniProtKB/TrEMBL:A8WMH7" /protein_id="CAP21682.1" /translation="MVQSKEENISDLFVDVELKLDTIIRTFNDAGKTFESSEWAKEKK LTLRKFDVMVRLAEGENEVAKNLLIKNLESCMTRLRLVLKLAGSGIFVLFGGPGNLFP IPGFLVHIFKGTPHAKH" CDS join(862324..862491,862596..862727,862775..863116) /gene="CBG27911" /locus_tag="CBG_27911" /standard_name="CBG27911" /product="Protein CBG27911" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEK6" /protein_id="CAR98336.1" /translation="MPAIMPEKVLLLKPVVRMSRDIVCATENKNRILLTPKQKEMNSL TIAMFDACFNELYFVIKSQPFPFDGQPRFADELMKRDAKITEMLNKRGLVTAKVFETD QIVFEQLLDDFRREIGVQYKELYMFMLLVEETHAFQGLCAMFEVEEIIEDLTDAERHV WNFINRRFEWLNGAPQPESCWLYNALTYYNDEKYVKNEYKDILIERYGPENMN" CDS join(864571..864654,864719..864832,865061..865216, 865263..865343,866465..866541,866588..866741, 866841..867143,867366..867470) /gene="CBG00223" /locus_tag="CBG_00223" /standard_name="CBG00223" /product="Protein CBG00223" /note="Predicted" /db_xref="GOA:A8WMH8" /db_xref="UniProtKB/TrEMBL:A8WMH8" /protein_id="CAP21683.1" /translation="MFSICIIGDCIRFISRCDLLLTGFLFLLAIVNFFMRLQFLDRWM HKTKLLVKQIRLVRKNSKKVLMELPFLIEDMTTIRELYKYIKDFTGGLDGEDNILAGD YCSENCVENCIKNGTMKLGSVFTAKDVLVVNTDEVSILRTVGSVHHKMSDSDHSGLGL SENLRNILFKRKYLWTAFDQWINEEPSERRHQFEIIRSALLVPCEYASFVFNGIGEEE EPPMRKLTSFMNQTEFLQAPSWTVPSKSIFDILKDIFNTVTEFQSENGIIHDIFLLML ISSTHFRVLSQFFIVGLWLLKRYKEDVGKVSSDELLTQEQMEGQFRKFRRTIEEQSNV LDQEQKTDEIQKEWETLPAVSNL" CDS complement(join(868301..868411,868463..868606, 868654..868791,869396..869512)) /gene="CBG00224" /locus_tag="CBG_00224" /standard_name="CBG00224" /product="Protein CBG00224" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMH9" /protein_id="CAP21684.1" /translation="MRLCLNIFDLLTFRTRGEELAAFSISLVKSAMSFSKYKEVTTSF VMTIIANNQAQVVVNNHQEQPTEAMKFEFVKNKFVSLRNNLMYLLEYINHMEYHPEER VDNYHIMKIKANFFIDEIDYHLHREITYQNKVSFQEYYAAYSKFYQRSRTELMEAFHQ LTPDRQYTW" CDS join(874400..874486,874538..874690) /gene="CBG00226" /locus_tag="CBG_00226" /standard_name="CBG00226" /product="Protein CBG00226" /note="Predicted" /db_xref="InterPro:IPR035291" /db_xref="UniProtKB/TrEMBL:A8WMI0" /protein_id="CAP21685.2" /translation="MKSDDYPNVLNLYQVVHRGHAMLNVCLQEAFQFHVAGRPFQTSS LLVQTRRMQFAEWAYYVSRLQQAPNTREVFLNRPR" CDS join(875802..875881,876268..876536,877009..877193, 877241..877462,877511..877711) /gene="CBG00227" /locus_tag="CBG_00227" /standard_name="CBG00227" /product="Protein CBG00227" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR000719 (Protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8WMI1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/TrEMBL:A8WMI1" /protein_id="CAP21686.2" /translation="MTMMAGSGIPNWYPYINYMFLELYLRKNPISCYTQGTFIIQRYR VVSRLGYGSFGTVFKVHDSSENDALQAAKVARKEDDNTGKFETEVAALKKCIGLVHWP QMSNYFETKSYRIIILSLEGESINDILSRKNNKVFTNDNCLRISFALTKALHSLHGIG YLHRDINDNNVMIKKVGKEVVVRVIDLGNSAPCHPRQKCDFHTYTTSYHVTIGKEYCE RDDLVSAMYLMSDVAGAQIFDTAKYSFDASKKRFHASPTSFFSGEQKWMGQLIEMFDT MEWNEKKPDMTRIWKQYEQSIPEVSPTSPIKYKDIDNVIVID" CDS complement(join(879520..879611,879655..879763)) /gene="CBG27912" /locus_tag="CBG_27912" /standard_name="CBG27912" /product="Protein CBG27912" /note="Predicted" /db_xref="GOA:B6IEK7" /db_xref="UniProtKB/TrEMBL:B6IEK7" /protein_id="CAR98337.1" /translation="MHWLVSTTTMLILGVIYIIFPDFEFTISNTMIIIGMILIVASHY DCYEDQRRQLPKMLVIEKNVVR" CDS complement(881934..882347) /gene="CBG27913" /locus_tag="CBG_27913" /standard_name="CBG27913" /product="Protein CBG27913" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEK8" /protein_id="CAR98338.1" /translation="MLTFAPTSYRVKSNTGHEIFDLTPAAFFLNSQFVDLYGNPQNRN TIVHVDVKEGLLRIVVRWSQMTAANASANTRELTPAQIQFFAYIENAELYELFGVALR IRNQSLIVAVQREKERRRREIEPLFYGPLAHYIRN" CDS complement(join(890396..890437,890490..890597, 890644..890737,894639..894715,894787..894886, 894935..895101,895145..895289,895337..895461, 895889..896005,896052..896277,896398..896528, 896576..896689,896730..896858,896956..897063, 897334..897388,897979..898037)) /gene="CBG00230" /locus_tag="CBG_00230" /standard_name="CBG00230" /product="Protein CBG00230" /note="Predicted" /db_xref="InterPro:IPR029512" /db_xref="UniProtKB/TrEMBL:A8WMI2" /protein_id="CAP21687.2" /translation="MSRRTRGTRDTAKDIILGLAPSGQGPKAPKEGHAVTPKTPERPP RTGDDGALIRLQSQLAQMQQQNRDLATAEKAARKRLEQNQDALTRRLQNNESSGVQSR DFDDVRRQMNSMDAKLMIMNNDISGLRNSMDRQVTDLMHINNEMKSRPVVDPSKISSA NSQLDSKLRDMHNQVMELQKNLNREQRDREKDSKTAGDGIQRLQDMIRHQDLARQDIM TNLSKKGDVDKDKLNEETRRLNDKINLITAEVTRKMTENQQKTKDDLNSRISVLENMI RTQTERFVANENEMRLSYESRLADLSGQLDVAMKQISSEKAKQKERFQKVNEALAALE HHLELGNNKIDKLMNSEIQARKLHEKGLLAKMTDIEDRVNNYVGGMNKSIDEMKNGNN NVKMPALDTDALRREMEAIAADKNKLSMEGLLKLEEKMSRVQQGFYHDRKEMNQRLTD LGDGEHVSKIRAQLNKMDALQEDMEKAQDRIRDKVERQIPQDLNELSAKADNIKHQLN TRIDNEEEERYLAIKELQEAFTTLQQTQYNGGKTAATSDQQMKRDVDECKIAIKKLAE SVTTVKNVLDKKITDETKRREDDVSSLRRQMS" CDS complement(join(898510..898540,898824..898861, 900388..900540)) /gene="CBG00231" /locus_tag="CBG_00231" /standard_name="CBG00231" /product="Protein CBG00231" /note="Predicted" /db_xref="GOA:A8WMI3" /db_xref="InterPro:IPR040279" /db_xref="UniProtKB/TrEMBL:A8WMI3" /protein_id="CAP21688.1" /translation="MVDLKQQLQWIDYLGVVAVWLCFFGTVLVISVTCILWCCVGKED DPTVFAKYGFGPQPRVPSQRSKLEVEKDF" CDS complement(join(903478..903659,903711..903898, 903960..904098,904380..904514,904568..904763, 905409..905492,905536..905649)) /gene="CBG00232" /locus_tag="CBG_00232" /standard_name="CBG00232" /product="Protein CBG00232" /note="contains similarity to Pfam domain PF02515 CoA-transferase family III contains similarity to Interpro domain IPR003673 (CoA-transferase family III)" /note="Predicted" /db_xref="GOA:A8WMI4" /db_xref="InterPro:IPR003673" /db_xref="InterPro:IPR023606" /db_xref="UniProtKB/TrEMBL:A8WMI4" /protein_id="CAP21689.2" /translation="MTRLLNGIKVVELAGLAPVPHCGMMLADFGADVTVIDKKHPVVE QRMNRGKTMKEFDLRKPEDVKKVRELCKTSDVLLDPYRPGTLEKMGLDPLSLWNDNKG LIICRISGYGQTGRMKDEAGHDINYVAMSGMMPTFAGTEASRPWPPVNMLADFAGGGL SAAFGIVSAIHARHHNGGKGCVLDCSMTEGTAYLASFVQHYYDQTHLFTDKYAAFTGE CPIYRTYKTKDGKFMAVGPLEPKFHQNMFEVLGIDGDDLFSDPDRITKELEATFLQKT RDEWSKIFEGKDCCVTPVLDIHEVGTYGQHVDRQNFSKSDKFGGTWIAKPSPRVQTIE ELTAAATRSKL" CDS complement(join(906436..906627,906790..907056, 907116..907424,907475..907513,907562..907749, 908402..908603,908652..908779,910372..910432)) /gene="Cbr-twk-18" /locus_tag="CBG_00233" /standard_name="CBG00233" /product="Protein CBR-TWK-18" /note="C. briggsae CBR-TWK-18 protein; contains similarity to Pfam domain PF07885 Ion channel contains similarity to Interpro domains IPR003280 (Two pore domain potassium channel), IPR013099 (Ion transport 2)" /note="Predicted" /db_xref="GOA:A8WMI5" /db_xref="InterPro:IPR003280" /db_xref="InterPro:IPR013099" /db_xref="UniProtKB/TrEMBL:A8WMI5" /protein_id="CAP21690.1" /translation="MAIVAAGVSKVLTTFQKTFKGLLPLIILVIYTLLGAWIFWMIEG ENEREMLIEQQKERDDLIRRTVYKINQLQIKRQRRLMTAEEEYNRTAKVLTTFQETLG ILPADMDKDIHWTFLGSIFYCMTVYTTIGYGNIVPGTGWGRFATIVYAFLGIPLTVLS LYCLGSLFAKGCKILWKFFLRSTRVVSKDLSEKISEAADNIEEGTTAVAPASKEENDD DDLLSFPISGLLLITVIWVIFCAVLFTFLEEWDFGTSLYFTLISFTTIGFGDILPSDY DFMPIVGVLLLIGLSLVSTVMTLIQQQIEALASGMKDNIDQEYARALNEAREDGEVDE HVDPEEDPETNKKSLNAVVSRMPLSKRALYYFLPASQKKQLEQQSEKKMGRKSIKVQT DSELLETLIREEILKAELNNEMHKFNGPRSSQQPRLIHSEIREKEVPIEVVRVEQYNH GGHDDYLEHDI" CDS complement(join(913582..913651,913702..913855, 914316..914438,914828..914906,914980..915063, 915146..915211,915257..915376,916336..916435, 916486..916632,916677..916777,916893..917048)) /gene="Cbr-nmur-1" /locus_tag="CBG_00234" /standard_name="CBG00234" /product="Protein CBR-NMUR-1" /note="C. briggsae CBR-NMUR-1 protein; contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10328 (Serpentine type 7TM GPCR chemoreceptor Srx) contains similarity to Interpro domains IPR019430 (7TM GPCR, serpentine receptor class x (Srx)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8WMI6" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8WMI6" /protein_id="CAP21691.2" /translation="MLKVCMNVTDQCDCLAIECPIAYSNSVEEKEACYMEHCFISKRA LDDVTLYKVTALYLVIFIIGVFGNTATCLVMRKHPMMKTHTSMYLINLAVSDLVTLCV GLPFEMMMNWHQYPWPFPDVICNLKALIAETTSSVSILTILVFAIERYVAVCHPLYLV KNQFFKRNMKSIIGLSWIVSILCATPFGIYHRADYLMRSWPGTDDKIPVISSKMCMVA VMFEPKLEPTFKVLFHFSAIAFFVVPLLTILVLYARIACKVSNNRTIQAGELDITEEL QLKINAILCAIVSAFFICYLPFQFQRLLFFYLDNEVILVWINQYVYFISGFLFYLATI INPIAYNVASSRFRRAFKDILFYYCFGRKSNGYPRSSFSKYSLAHTPLRQAMSNRVPI LDPKVNA" tRNA complement(923565..923646) /gene="CBG28991" /locus_tag="CBG_28991" /standard_name="CBG28991" /product="RNA transcript CBG28991" /note="C. briggsae predicted tRNA" tRNA 926278..926350 /gene="CBG28727" /locus_tag="CBG_28727" /standard_name="CBG28727" /product="RNA transcript CBG28727" /note="C. briggsae predicted tRNA" CDS join(932602..932679,932732..932818,933698..933880, 934010..934098,934145..934410,935145..935278, 935329..935400,935481..935585) /gene="Cbr-aexr-3" /locus_tag="CBG_00235" /standard_name="CBG00235" /product="Protein CBR-AEXR-3" /note="C. briggsae CBR-AEXR-3 protein; contains similarity to Interpro domain IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8WMI7" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="InterPro:IPR039952" /db_xref="UniProtKB/TrEMBL:A8WMI7" /protein_id="CAP21692.1" /translation="METQPFDNSTMMELLEEEEPICIESTFLTMRVMENYLKSFEYFL LVSCFFSTFLQIYVLLKAVKYIRRGTGDECLHVFLLSMTLGDLLLTCFCYPIEQLREQ EIIKPPQWINIAQHFLTWVGLSASSLSLICLNADKLMYFKFPLRYANMVTSFKGVSLA LFVWFGCIVFVTLCWWLECFTCEEDCRQLMILPNKVVMYIAFTVSACIAPSLTSLGVA IYILNVVTTHRSKLSDENGNSSHALATRLRTFYFIFMTTIFTVGTLLPYRIYNIQRQL TPRETGDISCGSIIFSWTCLYLVSLNAILNPIITVTVLPQYRFRWLCKKLGGGSSPTA VYV" CDS join(944648..944664,944818..944875,946467..946614, 946694..946958,947011..947044) /gene="CBG00237" /locus_tag="CBG_00237" /standard_name="CBG00237" /product="Protein CBG00237" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMI8" /protein_id="CAP21693.2" /translation="MQNNSDIGLMVRDENLMILREIVFGAIGWFPISGTLYPVYATTI QVSGKGKKTLPDFYPSITGAYLIALTYQDHVPDNSFRNFNLHFVNPGDSGNFKGYQDG SSDLWVIFKNHSIRKFMISQDDGNYIAQSFWFLNLDYKMTLNYNYMGQDVQNLQIRIY SPFATNNWLPYND" CDS join(948070..948159,948499..948711,956200..956442) /gene="CBG00238" /locus_tag="CBG_00238" /standard_name="CBG00238" /product="Protein CBG00238" /note="Predicted" /db_xref="GOA:A8WMI9" /db_xref="UniProtKB/TrEMBL:A8WMI9" /protein_id="CAP21694.1" /translation="MVNFLALRKIASKREVSEFRTCPNLSVFSKNLVLFFQNLEVTVS HVQKTCQGCYQNSREKETHQFSTYLLIRDGQLQRNLQKTFATPKKSSAPCRSCGAGEP PLAPKPGLASCDLSALVPTRLREHLATGSPPLSTVPPTFLPFQDKVGSLLGFLSRSIF AAFFLYPISHFFHFLQDRHTY" CDS complement(join(949151..949194,949274..949355, 949393..949546,949620..949722,949793..949874)) /gene="CBG00239" /locus_tag="CBG_00239" /standard_name="CBG00239" /product="Protein CBG00239" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMJ0" /protein_id="CAP21695.2" /translation="MFFYLVLLCLRHVVFIQKESCPERYSNSRATDSLEAIFEEFQFL NDARMDFIRNNIGHCFKRAQEIVLNERPGADRVLPSEMALLHMTYERVPDVNKMNFTV WATVHEITEADVRLYFRERDEREAALIAAQDRAPAASSASASGSGDESCQRD" CDS join(957127..957704,958616..958778,960257..960370, 960986..961074,961123..961267,961418..961558, 961738..961828,961874..961965,962014..962115, 962904..963006,963725..963828,963872..964197, 964678..964772,964830..965164) /gene="Cbr-trk-1" /locus_tag="CBG_00240" /standard_name="CBG00240" /product="Protein CBR-TRK-1" /note="C. briggsae CBR-TRK-1 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR017969 (Heavy-metal-associated, conserved site), IPR000719 (Protein kinase, catalytic domain), IPR008266 (Tyrosine-protein kinase, active site), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8WMJ1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR020635" /db_xref="InterPro:IPR032675" /db_xref="UniProtKB/TrEMBL:A8WMJ1" /protein_id="CAP21696.2" /translation="MVLRILLTLLILTYSPGSLSIPQCSKIAKDTVRCDSLKSFNGSS KALIISDCENLSRLDEIVEFGPWHTVTNVTFDCPIDNFPWEFADMFPHIRYIHFTRCN LTTLAWQSVYTETLKYVDLTHCPIECSCQNQWMRTEIFEKLKEPLSLRKCLPDCDTGR ISINDSMIVGNGGENVTIRVDLKDQYINRTIEKPYFEWAYAKIRHNYEEVISESRADL VITNLTREDMGLIGVKCWHCVNFLTTKVELRVNLPIKVEFVEKTRGDTDFLVVQGYPI ENITLAVTRVQSNYTEMNVMDNEQDEVFFSSMIVRPEKRSIFYQRTYRIFTKDIADGD HLSGDLRFEVCTMGNCDAVEKHVSHLGVINGTLDDYFATASPYKRPIQILVTFIVIIG FIITIILCTHYRMEVRTTIISLRKRMSLAHDLHSRRASHETEETLLRLEERSSLASDY CNMTLMFIDMGKIQIHELVGKGHFGEVYVGSWEQTGPRSVAVKSIRGIDMETEKEARV LQNLEHENIVRLYGMTMDRNNLLLVFEHMNYGDLKTYLQGRSPKATSYLQFPPPLVTD ELKWIIREIAKGVCYLVSQSIVHRDLAARNCLVSGESDMKAPSHLQRPPFKIKVCLKH VYDPSEKMNIVQISDFGMSRRLYDDSECYTMEHRGALPIRWLPPEAISSHKFTYASDI WALGVTMWEVMSYGKQPFDGLSNLEVSSFTMAGMKPLRPEKCSSEMYQLMTRCWKYDP NERITAEELFLDEIFDKVKDGLPYIPTAENGSMVASYNENVNRYEDESISREADTESE EDLGRFNIAFPGDPLQSDVDTHLSVFA" tRNA 962777..962848 /gene="CBG28945" /locus_tag="CBG_28945" /standard_name="CBG28945" /product="RNA transcript CBG28945" /note="C. briggsae predicted tRNA" CDS join(966060..966118,966184..966339,966380..966448, 966494..966572) /gene="Cbr-dylt-2" /locus_tag="CBG_00241" /standard_name="CBG00241" /product="Protein CBR-DYLT-2" /note="C. briggsae CBR-DYLT-2 protein; contains similarity to Interpro domain IPR005334 (Tctex-1)" /note="Predicted" /db_xref="InterPro:IPR005334" /db_xref="InterPro:IPR038586" /db_xref="UniProtKB/TrEMBL:A8WMJ2" /protein_id="CAP21697.1" /translation="MNMEDNVDRNFVLRPTPGQKFRPKAITGMIQEVMNEKLGDMIKY DENEADQASKDISSTIRERLKGNFLLKVTQSSTLQVFVQTMIAEQSGSGATTAVQCVW DEDCDGFLSHRYVNVGFS" CDS complement(join(967278..967441,967960..968056, 968101..968166,968303..968748,968809..968972, 969030..969486,969536..969734,970558..970665, 970781..970868,971115..971284)) /gene="Cbr-acs-22" /locus_tag="CBG_00242" /standard_name="CBG00242" /product="Protein CBR-ACS-22" /note="C. briggsae CBR-ACS-22 protein; contains similarity to Pfam domain PF00501 AMP-binding enzyme contains similarity to Interpro domains IPR000873 (AMP-dependent synthetase/ligase), IPR020845 (AMP-binding, conserved site)" /note="Predicted" /db_xref="GOA:A8WMJ3" /db_xref="InterPro:IPR000873" /db_xref="InterPro:IPR020845" /db_xref="InterPro:IPR025110" /db_xref="InterPro:IPR042099" /db_xref="UniProtKB/TrEMBL:A8WMJ3" /protein_id="CAP21698.2" /translation="MADSPKFALVTFAVYAVILYNVNSFFWKFVFIGYVVFRLLRTDF GRRAMATIPRDFAGLKLLISVKSTINALFKKDRPIHEIFLDQVRQHPNKIAVVEIESG RKLTYKELNELSNQYANLYVNEGYKIGDVVALFMENSIDFFAIWLGLSKIGVVSAFIN SNLKLEPLAHSINVSKCKSCITNNSLLPMYKAALEKGLISKDIHVFLAGTEVDGRHRS LQQDLQLFSTEEPAPVDGLNFRSVLCYIYTSGTTGNPKPAVIKHFRYYWIAMGAGKAF GMTKPDVVYITMPMYHSAAGIMGVGSLIAFGTTCVIRKKFSASNFWKDCVKYNVTATQ YIGEICRYLLAAKPCPEEKEHKVRLMWGNGLRGQIWKEFVGRFGIKKIGELYGSTEGN SNIVNLDNHVGSCGFMPIYPHIGAFYPVRLIKVDRATGELERDKNGLCVPCVPGETGE MVGVIKEKDALLKFEGYVSEGDTAKKIYRDVFKHGDKVFASGDILHWDELGYLYFVDR CGDTFRWKGENVSTTEVEGILQPVMDVEDATVYGVTIGKMEGRAGMAGVVVKDGIDID KFLADITSRLTENLASYAIPVFIRLCKEVDRTGTFKLKKTDLQKQGYDLAACKGDKIY YWVGSEKSYKPLTEKMQQDIDAGIYDRF" tRNA complement(980344..980415) /gene="CBG28536" /locus_tag="CBG_28536" /standard_name="CBG28536" /product="RNA transcript CBG28536" /note="C. briggsae predicted tRNA" CDS 983918..984166 /gene="CBG00244" /locus_tag="CBG_00244" /standard_name="CBG00244" /product="Protein CBG00244" /note="Predicted" /db_xref="UniProtKB/TrEMBL:G2J6A8" /protein_id="CAP21699.1" /translation="MITDWLISDSMIVDQYSIHVTSCLYGTQGSDMRLCIPIHHPEPD PPTTSFPEEFRPVISKTTNQSTTDSAVFLRIYCFRATF" assembly_gap 985026..986025 /estimated_length=1000 /gap_type="between scaffolds" tRNA complement(986981..987052) /gene="CBG28999" /locus_tag="CBG_28999" /standard_name="CBG28999" /product="RNA transcript CBG28999" /note="C. briggsae predicted tRNA" CDS 990556..990804 /gene="CBG00245" /locus_tag="CBG_00245" /standard_name="CBG00245" /product="Protein CBG00245" /note="Predicted" /db_xref="UniProtKB/TrEMBL:G2J6A8" /protein_id="CAP21700.1" /translation="MITDWLISDSMIVDQYSIHVTSCLYGTQGSDMRLCIPIHHPEPD PPTTSFPEEFRPVISKTTNQSTTDSAVFLRIYCFRATF" CDS join(992877..992928,993275..993332,993487..993621, 993664..993798,993916..994216) /gene="Cbr-nlp-14" /locus_tag="CBG_00246" /standard_name="CBG00246" /product="Protein CBR-NLP-14" /note="C. briggsae CBR-NLP-14 protein; contains similarity to Interpro domain IPR005829 (Sugar transporter, conserved site)" /note="Predicted" /db_xref="GOA:A8WMJ6" /db_xref="InterPro:IPR040384" /db_xref="UniProtKB/TrEMBL:A8WMJ6" /protein_id="CAP21701.1" /translation="MLHPIVLLLVASSAVYAARPRRALDGLDGSGFGFDKRALNSLDG AGFGFEKRALNSLDGQGFGFEKRALDGLDGMGFGFDKRALNSLDGAGFGFEKRALDGL DGAGFGFDKRALNSLDGQGFGFEKRALNSLDGAGFGFEKRALDGLDGAGFGFDKRALN SLDGAGFGFEKRALDGLDGAGFGFDKRALNSLDGQGFGFDKRSSFKHQSSKLRSVFRN LRGFNKQH" CDS complement(join(996380..996418,996694..996829, 997928..998049,998100..998186,998235..998348, 998393..998606,998971..999362)) /gene="CBG27914" /locus_tag="CBG_27914" /standard_name="CBG27914" /product="Protein CBG27914" /note="contains similarity to Pfam domain PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD contains similarity to Interpro domain IPR002130 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain)" /note="Predicted" /db_xref="GOA:B6IEK9" /db_xref="InterPro:IPR002130" /db_xref="InterPro:IPR029000" /db_xref="UniProtKB/TrEMBL:B6IEK9" /protein_id="CAR98339.1" /translation="MEPRQLGEAVTEESDEEIIDLPLADDDDKSSMMSSDDSPTYSGR SMELCEDNCSVCLDSREAEADLSVELEEMETAESTGVMEETAMDLAELEEEEEIVAAA VPEVEQAVIPFGRPRTVTPEELHRVYHSELALNEISAYFGPYRIIFDVVSGNLMMGRI IIMLSNFEPELRKHFYKMADGNRTNRSFSGTIFHRKTNKFIEGGVLTSSNDTSTVESL YTTKPVNNPKFYSKYVMIANRNIHDDYRGTRFLITTSPLLHCDQDHIPLGTIVCGREI FDQIAELPCDQDGKFLSTLSIHHSVNHKLTKDQWLRCGKYEKPWQRDLKRALLPRYQV RKLSRQSSNNASESVSGGRSQNHRDDSPSEQVN" CDS complement(join(1000287..1000613,1001262..1001366, 1003967..1004312,1004366..1004858,1005348..1005450)) /gene="Cbr-cyn-8" /locus_tag="CBG_00248" /standard_name="CBG00248" /product="Protein CBR-CYN-8" /note="C. briggsae CBR-CYN-8 protein; contains similarity to Pfam domain PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD contains similarity to Interpro domain IPR002130 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain)" /note="Predicted" /db_xref="GOA:A8WMJ7" /db_xref="InterPro:IPR002130" /db_xref="InterPro:IPR029000" /db_xref="UniProtKB/TrEMBL:A8WMJ7" /protein_id="CAP21702.2" /translation="MSSREGRGNKRTFFDITINGEPAGRIVFALYNHSCPSTAENFRA LCTGELGQLYGHNASYQGSIFHRCIKGFMIQGGDLTHKNGQGGFSIYGRTFDDENLSL PHNKPFLLSMANRGPDTNGSQFFITTEKVPHLDGKHVVFGEVVKGFDVVKRIEKVETE EEDMPVQRVTIAHCGEMVRKSDVMASDKKKKQDEQGAEPEPVGCKMDDEPKTVNWLMR RSRSRTPEDSKKSKKDRERGGNRGDRRRHDRQRDRYGRERRSRSRSGSRDRHRDRERN RVPDERRSGKRPVSIPISKADCEVNKYERELGDCQEILVITNKDGIKVRGRGKLTFMG SRDRSTTPPHWKREESKKLTLEEHQKRQEEMEERKRLRAEREKEDVERKEREEKEAME RAAQRELERQEEEEARKRSRSNSPQSPRVKQELMSQRQESKAESNSSRSSSSSSGSSS SSDSDSD" CDS complement(join(1006139..1006352,1006398..1006796, 1006843..1006964,1007373..1007762,1007814..1007901, 1008066..1008208,1008621..1008684,1008770..1008843)) /gene="CBG00249" /locus_tag="CBG_00249" /standard_name="CBG00249" /product="Protein CBG00249" /note="contains similarity to Pfam domain PF00147 Fibrinogen beta and gamma chains, C-terminal globular domain contains similarity to Interpro domain IPR002181 (Fibrinogen, alpha/beta/gamma chain, C-terminal globular)" /note="Predicted" /db_xref="GOA:A8WMJ8" /db_xref="InterPro:IPR002181" /db_xref="InterPro:IPR036056" /db_xref="UniProtKB/TrEMBL:A8WMJ8" /protein_id="CAP21703.1" /translation="MVPTSSWLPILLRRKLLNCRVPLFRSYYIPTVTDLTMDQAKEEP LTSFAENPTKSVEKDALVEQGVKFTRPDQVKKANVAEAKWPWCKGKDYGKMPRYLIVL LLAFLLIAVVVMFYVFLHVGMRNTPTTVVHEPEIVYTLPSERIGDEDLHHVVTLPVDK EIASEEDLITTTTDGSVSEITDDVVEEAEKSEDVEKKEVEAAEELQAETATLETTKPV STTPARRRRPTPTRRMPISTSTLQFYDPVDDETTESCFDRLITGSPSGVYNIQGPKDY QAYCDMDTTTGGWTVIQRRVDGEEIFQRGTMKKYVNGFGKLNGSHWLGLEKMHYMAPV GSLPATLRIEIQGETCDTTCSRRFANNWVGEWKVNFGGKEDGYKIYFSGRGIGNLTVN GSDPFYEANGKRFTTLDNDQDENTQMNCAGFRMLGAWWHTGECSSVGLNGYYQTVAQK YNINDRNQNDKRYFVWAHDKHTIHGYPYIIHVRKSLMLLKPDVETHK" CDS complement(1017316..1017420) /gene="CBG27915" /locus_tag="CBG_27915" /standard_name="CBG27915" /product="Protein CBG27915" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEL0" /protein_id="CAR98340.1" /translation="MSCLSNVDSAFDTASDISWDSFPDDLPPSMDLIR" CDS complement(join(1019018..1019182,1019883..1020008, 1020710..1020826,1021165..1021425,1021474..1021725, 1021774..1021971,1022296..1022460,1022477..1023120, 1023198..1023620,1023701..1023912,1023959..1024044, 1024307..1024408,1024517..1024786)) /gene="CBG00250" /locus_tag="CBG_00250" /standard_name="CBG00250" /product="Protein CBG00250" /note="Predicted" /db_xref="InterPro:IPR038060" /db_xref="UniProtKB/TrEMBL:A8WMJ9" /protein_id="CAP21704.2" /translation="MMDRWLGNIRRVITAKRDNQQVPVQQTQGQQESSEQGSSNQQEP GQHDTAMQNFSDLEADKEKSKKNIGPEAHKLNDMIVIVAAFLETGKFLLAIRYCSTIV ETAFDNNDPQNPYRLLFLSFLNLAQLESKFYDFNIFQQKSESLKVAYSRCQQSFMRIL KMESTHFKSAELLNAADEFARFTCFRQCHVNILKYLANLDENETMDWFDVLKSLDSNI LAMINDSDISLRLCKTDKEKKEFEMSLHKIQKDELASNDQFCFSWLKNLRYEEIYHRT NLTYHIYEIEPAYRKFWKKLKTDQTDFLINVVNRKEYEVPYWKLCQKQPVEPRRFGPK NTELEDREETEAKKCSSSNDSGFADNEMVVPVFPGSDQSFTTFHADALRRKLQRKQMR LKYYNDCASEDCRKRVPEHLRRKIRIMIRNSMAEAREICIKEMRPYPLLEIPFHASDD ENSDDETAPKVFTRTETEMTVRNKKMKQFGLLDPYGISKPVLWWKNAKEELLAARAIE SSCLKMNGESSEPFASAEKYRGFLVEGEHVRNRVLESQRTSKCRVFNFRKEMNVDDGM LLTMVGSNTIDPFPAMDPFKDIVVPRKRSEDRFGLKSLFLQNLRRRCVDELLMLMMII KGHQQLQEGNFFRCLAYVKLLEFKMTVYTEEIRSEEVQKTNFFSYLMHIYKLFLGKYT LYARYVVGPECMPRKQLQLMKNESDYSLAERCFEFCKNTDAYFFCIVIRGRLFCFEED QRHGLPPFEQLEEYEEQLEFFLSLDSANKNMGQYWRSQVKPLIQMLVQMHDNTLLDHI DKWDGNKIMALVDKFPMILPNEKNWLRRVATYATNLKEGKAFEEAVKDPFDYNLPILF QLPFYANGLATKFMIRGTTEFIEDAVTSFVGRGPAPKNEESSNIETCYDSEIDCVMTI VISDSLPMSHKIVDAFLPELRSQRIENQVNPFLTSCFETLFGKSIEKDIYMVSVHDEK PTPFQTDKIHRGLRKLSKTLKSQNGFNYSKQFHA" CDS complement(join(1025848..1026057,1026308..1026424, 1038328..1038440,1038754..1038843,1038888..1039014)) /gene="CBG00251" /locus_tag="CBG_00251" /standard_name="CBG00251" /product="Protein CBG00251" /note="Predicted" /db_xref="InterPro:IPR007350" /db_xref="UniProtKB/TrEMBL:A8WMK0" /protein_id="CAP21705.1" /translation="MSEEDLKLAAHLIHMGESINKGDYEISSEEHISNFEEELQDKTW TPNTAFMKCIYCDNHLCFEDFIIQHHNCSSRYRGARKKLSRYLPCPKVYMHQFSRNSQ TLSENTSLQKKPKRCITYASRQMLQESKKTTLEISANSRFLVYGVGRKRKYPNETLKL PSELDSTFPFVFIFYSVHSIHFSEKKVENDEHLPPVSRSFPPAVFLEKSTHPDQLLFL " CDS complement(join(1042397..1042475,1042544..1042654, 1043133..1043292,1044140..1044243,1044291..1044359, 1044895..1045016)) /gene="CBG00253" /locus_tag="CBG_00253" /standard_name="CBG00253" /product="Protein CBG00253" /note="Predicted" /db_xref="GOA:A8WMK1" /db_xref="UniProtKB/TrEMBL:A8WMK1" /protein_id="CAP21706.1" /translation="MEIALQGDSKGILYEGYTKAFRQCIFEEGDVEGKNERYEFRCDY DLECCGRTCCIPTPATIPLWLMILCIILAILALLLFLACLAYYLAKWWRSRPKKEKFV PSPMQETTCMLPKPVQITQRSEDEISRACSAQHLEPAPLSPQRAHNAFYRPFVADDVD DRDMPAPLRGSISYHSVNELTHSQFGTIKTIEKPKDRSSERMYKRPGFDNVPSY" assembly_gap 1050737..1050771 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(1050853..1050977,1051028..1051106, 1051789..1051847,1052118..1052226)) /gene="CBG00255" /locus_tag="CBG_00255" /standard_name="CBG00255" /product="Protein CBG00255" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMK2" /protein_id="CAP21707.1" /translation="MITLQKTCGDRKLKVKSLDSDRTVNTIRCLCDNPALVLSKTQKN CSPKGFKIKFVDQITHFSRVFSIFPSICGDMNISNASDDTIQMPQWFIDPTPNRQSLD LKMLEKLMILKEKDRFDTGET" CDS complement(join(1054629..1054781,1054839..1054903, 1054953..1055036,1055508..1055586)) /gene="CBG00256" /locus_tag="CBG_00256" /standard_name="CBG00256" /product="Protein CBG00256" /note="contains similarity to Pfam domain PF01064 Activin types I and II receptor domain contains similarity to Interpro domain IPR000472 (TGF-beta receptor/activin receptor, type I/II)" /note="Predicted" /db_xref="GOA:A8WMK3" /db_xref="InterPro:IPR000472" /db_xref="UniProtKB/TrEMBL:A8WMK3" /protein_id="CAP21708.1" /translation="MPQLSRCLLLLILVGFLTAAQFSRRNSGLVRCHKEIGSSVSSCE GKYCYKMHTPDDSTRDGIVKKGCMNAADAQTEVGKCTRRPLEEGGAELMCVCNERDFC NSSTIPSTFLIVLISSCFFLIFLL" CDS complement(join(1058636..1058756,1059074..1059210, 1059258..1059338,1059606..1059779,1059822..1059886, 1059934..1060003)) /gene="Cbr-gst-42" /locus_tag="CBG_00257" /standard_name="CBG00257" /product="Protein CBR-GST-42" /note="C. briggsae CBR-GST-42 protein; contains similarity to Pfam domain PF02798 Glutathione S-transferase, N-terminal domain contains similarity to Interpro domains IPR005955 (Maleylacetoacetate isomerase), IPR004045 (Glutathione S-transferase, N-terminal)" /note="Predicted" /db_xref="GOA:A8WMK4" /db_xref="InterPro:IPR004045" /db_xref="InterPro:IPR004046" /db_xref="InterPro:IPR005955" /db_xref="InterPro:IPR010987" /db_xref="InterPro:IPR034330" /db_xref="InterPro:IPR034333" /db_xref="InterPro:IPR036249" /db_xref="InterPro:IPR036282" /db_xref="InterPro:IPR040079" /db_xref="UniProtKB/TrEMBL:A8WMK4" /protein_id="CAP21709.1" /translation="MSSEQKPILYSYWRSSCSWRVRTALALKNIDYEYKTVDLLSEEA KNQLKTINPAGKVPAYVVNGQVISESLAIIEYLDETHPDVPLLPKDPVKRAHARAIAF LVTSGIQPLHNLKVLQLLNKKEAGFGGQFAKQFIVEGLTALEVLLKEHSGKYAIGETV TIADLAIPPLIYSANRFNLDLSAYPTVNRINETLAEIPAFIAAHPDNQPDTGLNA" assembly_gap 1062839..1063070 /estimated_length=232 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(1064549..1065495,1065706..1065871) /gene="CBG00258" /locus_tag="CBG_00258" /standard_name="CBG00258" /product="Protein CBG00258" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMK5" /protein_id="CAP21710.1" /translation="MSATFMALGQQPKLIRESIIQSMDIDALISASFSSEDAYNMIRM LIWRLENTTVNFQECYGRTYIQCSSVGFTEKIAQWQLIRATEGNFTAKLRINSTVYDI RLELEIPSVSLSACFREFDPAAQNTDSWNNEDYKKWFVTRSMRLFYDLFGRIRGIAVG MKWMQLRDIPYYTFPKHCVMLDEHASAIDITWFCDRFNGRTLIIDPIIRGVIEPNSNM MNISHLFIKDAPWFTGAHLQNFTGKNAFVFNAQIYTNDVVELVQQWLDGRNRRLRTVV IRPQSGIPFDPEDVKRSLKLQSRDWDPEERDRNFIFREDWKMHMLEPDVSLLDCSTGQ DFYRESDGMLATLHMTNRTLCFFVWRNRFPHLAENN" CDS join(1067800..1068107,1068157..1068750,1068805..1068922, 1071124..1071309,1071583..1071684,1071760..1071849) /gene="CBG27916" /locus_tag="CBG_27916" /standard_name="CBG27916" /product="Protein CBG27916" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEL1" /protein_id="CAR98341.1" /translation="MRINFTKFHDLFQKRVLLELGTKELTNFATLSRKSRAKVRSIRW PKVETFIDCVNFRADATIQYGNDQQREFHLSLETKPNEYIDKDEEEDFYTVNGQVFKM SLLARLWTMCGESLEDSINKRFGAVCIYFLTHFNVIHTLKVAVGTQMPRYFDPRITCI VRYENITTEDEDNEFGIYDSWSVFKKLYDVVYNDLNSDFPSGNSTENRKGFSVIHRET YGIEENTILNFSGETGVFYNTRFSRKEITDFVTAWLNGESNITGSLIFSQSKGIHLDT FEISFSFKNFNKQRGPELRFPLPEEITRFCEESGVWTDLSERSTKRIDKKRFDLVREC DQKRCTEPIVSDEEIKKLAPTFTPLEEHLDNSMVYLLIRDRELSEPDWDYLSEYSEPD WDYLKQFHRLDKNWYILRPKPPRYQRQSFVHVVTDTKNVEELNEISGNEDVELPADLP VLDESSGIESFQPQE" CDS join(1073001..1073209,1073255..1073591,1073680..1073837, 1073881..1074061,1074189..1074281) /gene="CBG27917" /locus_tag="CBG_27917" /standard_name="CBG27917" /product="Protein CBG27917" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEL2" /protein_id="CAR98342.1" /translation="MSLLSETLEDAWIHSSAIIDCVRLETTATIQCQTDQGLLKKVIE IRGQIDENKPSRIKNIEVNDVNYCIIPEKWHPDFDTIEEAELFVQDEFGNMCLSFLTR RFGAMKNITILMEAIITCQSGHKFKMKFNSGFFFASLTTGIVDSGHGLFERNRRRMMG EETSRTMTMTWQPNSVYIESQWKWLYSDNITTHAVVIELQKQENANIILDHFEGRRYR KNEGGAIRVEKYFLFPELEKYYEHKINLLDCPSGSAQVIDLVREHGFELICTSKSTKT ISAFTCGTTGFQRIGFFVESLSPLTLFSSLQIPRQLGLHLLSPLSDIFF" CDS join(1077550..1077647,1077696..1077866,1078735..1079047, 1079096..1079358,1081169..1081349) /gene="CBG27918" /locus_tag="CBG_27918" /standard_name="CBG27918" /product="Protein CBG27918" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEL3" /protein_id="CAR98343.1" /translation="MIVSGPIEPQDACVVPSHNNNKTAEQYRPFNNEMQYFINSMIKK FPRTFEFVKMKKGKVTTNIHEYHICVGTRKIVAEMRVTEMCILEFSAVGRPFVIQVNN EEDIWHYTLQLFMFLQGRVKANYVEMSLDRTVLKRVCQLLAYEKVRNCNLLAMNFVEG NVSYHPAELLFLLQNLRGLRTYVHEPNLPPPVFTESEIRNVALMTVPVNITLADVLLA NTSYFEIAHCLEFDTSILCRVAQYWINTTTVLPWKVVKCHDSFESYETLPGLPYDAGR RPTIYTYTNPNTKVYEQFDTQHGKDLMRKDGLIATIFKHHPNESVSIGIFVVWNVADI MVYRTSL" CDS complement(join(1082706..1082844,1083071..1083225, 1083274..1083371,1083482..1083563,1084229..1084357, 1085198..1085320,1085596..1085679,1091164..1091247)) /gene="CBG00261" /locus_tag="CBG_00261" /standard_name="CBG00261" /product="Protein CBG00261" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WMK6" /protein_id="CAP21711.2" /translation="MKMRQKRGHIHIQEALLDEVLSFNKAWKYSEMTNQKEESRNERK AVILGTGHKTLFFKQLCDAASKYERHVHYPDVHYLTLDHMGAEHVVEVSDPGLARTGN REMALTDADFAILYYSSVNIDSLQALQPLIQPLQNRKNLPILLICDSDEVVLEETASQ HTNSTSEGYESDDRDGMKRHYSMEQIRKGLDDNMTSVIDQGEKLAQELGSRCSYLEIS SSKSSDAKKVLTQMIISLSKSGPTRNRRMSKIASLLRSKSSDKPAGEDMIFEAVQEKK KEKKNGKKDGKNEESKVCIVM" CDS join(1096967..1097021,1097695..1097813,1097857..1097960, 1098278..1098407) /gene="CBG00262" /locus_tag="CBG_00262" /standard_name="CBG00262" /product="Protein CBG00262" /note="contains similarity to Pfam domain PF00008 EGF-like domain contains similarity to Interpro domains IPR013032 (EGF-like region, conserved site), IPR006209 (EGF), IPR006210 (Epidermal growth factor-like)" /note="Predicted" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR013032" /db_xref="UniProtKB/TrEMBL:A8WMK7" /protein_id="CAP21712.1" /translation="MAITVSELLNGVASRLVYEGSPCDSHPCWNEGKCILNGSSSYHC ECPPAFIGPQCEYRLFEICRSIRCRSSTSPICQVGSFFANCSFVNQQGTRDVLSTRVR KKEVILQKQECDFLSGSECEDKESQDGRMRVCV" CDS join(1106274..1106301,1106351..1106464,1106717..1106819, 1106876..1106929,1107094..1107174,1107251..1107323) /gene="CBG00263" /locus_tag="CBG_00263" /standard_name="CBG00263" /product="Protein CBG00263" /note="contains similarity to Pfam domains PF00008 (EGF-like domain) , PF07645 (Calcium-binding EGF domain) contains similarity to Interpro domains IPR001881 (EGF-like calcium-binding), IPR013032 (EGF-like region, conserved site), IPR006209 (EGF), IPR000152 (EGF-type aspartate/asparagine hydroxylation site), IPR006210 (Epidermal growth factor-like)" /note="Predicted" /db_xref="GOA:A8WMK8" /db_xref="InterPro:IPR000152" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR013032" /db_xref="UniProtKB/TrEMBL:A8WMK8" /protein_id="CAP21713.1" /translation="MGIPIKRLQNFLSSCISTHCLNNGTCSNTTGSYRCICPPTFHGP FCQFDVNATNYSWSALEIALLFFVVFMIAFAIFIVCCASSNRMGFYISVPNKHYNRWA EEDDMFDDLPTENGEQLMAMADIRKGIVVSRTRETVLEDLEDSAILQL" tRNA complement(1109238..1109321) /gene="CBG28334" /locus_tag="CBG_28334" /standard_name="CBG28334" /product="RNA transcript CBG28334" /note="C. briggsae predicted tRNA" CDS join(1110231..1110308,1110447..1110517,1110564..1110697, 1110742..1110996,1111044..1111213,1111262..1111743, 1111792..1111949,1112440..1112497,1112583..1112770, 1113894..1114043,1114272..1114392,1114524..1114747, 1114791..1114915,1115391..1115597) /gene="Cbr-lact-7" /locus_tag="CBG_00264" /standard_name="CBG00264" /product="Protein CBR-LACT-7" /note="C. briggsae CBR-LACT-7 protein; contains similarity to Pfam domain PF00144 Beta-lactamase contains similarity to Interpro domain IPR001466 (Beta-lactamase-related)" /note="Predicted" /db_xref="InterPro:IPR001466" /db_xref="InterPro:IPR012338" /db_xref="UniProtKB/TrEMBL:A8WMK9" /protein_id="CAP21714.2" /translation="MRLLHLSLSPTIGVLVLAFITIQVTEPCTGEQLDLNAHFHGFTT GKRINAYPYTAPERVVDKALAKKHRKPQQAAQPYEPPNGAAASPVDTSADFGMQNGMQ GGGPGMPGMMSNNRLPPLQTVHPPAPNEKAWVLTAGNESLVDNVLAISLQYGGRLVSM GYYLRGQDVNYYAIMHKYSGPVFIKPAPMTFDELIKAVRENEARDLALTQVCGQEGKP GEITFTTYWERVPGVEFHIWFPGQPHADEQKTHFENNGYRLTYLCGYTEAGKGKYVGV WQKPVKSEAQYEAHYGLTMEACMQKDRILVQKGFVATSLRVFNNKNQVLCTGIWENRN GRSSIQVGQNLETMYRNMQRNPNMIPRQMSHYTDNYQNVVYVVLWSDVDVNRYPNPPP LWDETPIPVRFLKGSPELLSDNQMEFLIKRVEHFMKDLNIPGLSIAIAKKEQLKFAAG FGYTDIRQQEPVTPNHQFRVGSVSKPVTAAAIMLLIDKGHFTLDSKLFGKDSIFGSEF SKKYQYPRYVTEITVRNLLEHTSGGWDNLQSDAAWVQPDMTTKELIEHVLTNVPLEYK PGSMWIYSNFGYQLLGYLIETTTGMSYEAFVKKNIFAPSGVYDIQVARPSISERAPRE VVYYMSGNGLGFNPYEMLPPERIGPWGGWIASPIQLLMFMSRIDGFHNREDILSEYSI AELSTPSPASNDTYGLGWSLNIMGFNGWQHDGRMPGSAAMLVRLDNGLEMAVTVNKEY SERDFFHELGYVLHHIGNNCDWWNDDYDLFQKSRRSSRSAKRHLYPLATQRTTVHSTT NPHIIRFA" CDS complement(join(1115996..1116106,1116161..1116265, 1116318..1116496,1117885..1118052,1118105..1118174, 1118220..1118325,1118367..1118538,1118753..1118984)) /gene="Cbr-ttx-3" /locus_tag="CBG_00265" /standard_name="CBG00265" /product="Protein CBR-TTX-3" /note="C. briggsae CBR-TTX-3 protein; contains similarity to Pfam domains PF00046 (Homeobox domain) , PF00412 (LIM domain) (2)contains similarity to Interpro domains IPR001781 (Zinc finger, LIM-type), IPR017970 (Homeobox, conserved site), IPR001356 (Homeobox)" /note="Predicted" /db_xref="GOA:A8WML0" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR001781" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR017970" /db_xref="UniProtKB/TrEMBL:A8WML0" /protein_id="CAP21715.2" /translation="MLFNSASKETIAPHVIFPEPTTFHFGWTKLQEYDLAEKLHSPQY ANLNVVAATSSAPTPDTMISKPLKIPKNEPKDINHCSFCKFAIVDKEISVLEGKYYHH RCLRCAMCDMTFDFNDKCYVRDGSFLCRADHAKRYQKCCRKCEQPLNREDMVMRAKEM IYHNSCFVCFLCTKKLNTGDFYTVSPEGHLYCQAHYAVPTQVLLEEPKSTTVSAVASP PKTTPPTAVILPLSSTSPAPEAPARETSEAEASTDEDGSSNGHQRNKRMRTSFKHHQL RAMKSYFALNHNPDAKDLKQLAVKTNLTKRVLQVWFQNARAKFRRGLQDGGRPGSPML VIHSTLEMNPPLSTSSSNHSTDGFPSLSSPPLTTEIYSPNANYTHL" CDS complement(join(1124509..1124646,1125469..1125591, 1125644..1125727)) /gene="CBG27919" /locus_tag="CBG_27919" /standard_name="CBG27919" /product="Protein CBG27919" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEL4" /protein_id="CAR98344.1" /translation="MTPSPLSKSQAAEKILLEHGLGWLIQKLGLHNGHLPDGTTAKFR VVQFIIELPQVRRELCWIRTYSEFQARVEHFRRTIRVVTSVLEQSKAVIMANRKAQRL VPVWPDELEWDY" CDS complement(join(1135049..1135125,1136552..1136591, 1136745..1136870,1136919..1136984)) /gene="CBG27920" /locus_tag="CBG_27920" /standard_name="CBG27920" /product="Protein CBG27920" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEL5" /protein_id="CAR98345.1" /translation="MESKKATVFQLHCQLEMLGEKIVNSFHGVPKKGHPAYEDLSQRN GILQAILDSVAEMVHCGLCEFKIVNLDNSKIAEGRVDRINMMEFFQQKLVMDHGCSQT " CDS complement(join(1158079..1158215,1158268..1158421, 1158467..1158567,1158617..1158705,1158754..1159080, 1159892..1159987,1160032..1160246,1160299..1160436, 1160904..1161020)) /gene="CBG00271" /locus_tag="CBG_00271" /standard_name="CBG00271" /product="Protein CBG00271" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WML1" /protein_id="CAP21716.2" /translation="MGSNISTPSEVQPVEVTEEMTIQKTCEEAAGFRIGFYTKIKAGW NSQALNDTKMIHYLYRIFYMAPNDQEVQVFEWHNFFDIHHDFPMRVHIDNNEDHKKCA SMAEIIVWFSKPEKDRNALRRLGKAPNKIYCLGCKTVEEKEFLSLMAMRKMTEQEKAA SSSVLTISDKAVKRLGMSQLDVAVAARECARTPTTNPCQNALMSSVIGLPLRRSASAL LFPVTDLLDQHCIKESKNNMLLDPSSWHMDKASSSYDLNKAETKPKKKLSRADFIPKI FVGGKNLGEPSEKTEKASNSEEIQRKNGTVDIPILKQSEAHKKSIAKRKMHERLLKAS EWCRVTDEDKAVLVEIKVRQRLLLIQHYIRGWQDMGIKDKCMAKWLMDDITKPLHSRR FASFEYHHFIPSHDLQIITKLNKAQMEKYARNYIMYMQRVESLKSYTSGRGEMQKKSD DSGYPQL" CDS join(1171900..1171994,1172502..1172618,1172773..1172863, 1172908..1173046,1173666..1173955,1174002..1174203, 1175171..1175277,1175324..1175434,1176173..1176370, 1176962..1177072) /gene="Cbr-rsd-3" /locus_tag="CBG_00274" /standard_name="CBG00274" /product="Protein CBR-RSD-3" /note="C. briggsae CBR-RSD-3 protein; contains similarity to Pfam domain PF01417 ENTH domain contains similarity to Interpro domains IPR001026 (Epsin domain, N-terminal), IPR013809 (Epsin-like, N-terminal)" /note="Predicted" /db_xref="GOA:A8WML2" /db_xref="InterPro:IPR008942" /db_xref="InterPro:IPR013809" /db_xref="InterPro:IPR030544" /db_xref="UniProtKB/TrEMBL:A8WML2" /protein_id="CAP21717.2" /translation="MSDLLAGLTTSIKSTANAISRNEYVRKVTESMNDAIMNYPKPHM EVREATNEDPWGPTGPQMKKIAEYTRSRYMEDFYNVYTPLFARMLENNKDAWRRVYKS LILLDYLLKHGSERFVQEAREKIYELRRLESYKYIDEKGKDQGINIRHRVKQILEMMN DDELLQAERKKANSDDKSKYRGYDKYDINSSGMKSSSSSNFDNSWDRNPSSTTSKRYD KEVSNFSFSSSTANRSPSPELGFVDDTTKKDTAANDDDGFGDFVSSRSSASSGSKVKA EPPKAARSFFDDPVPVIPPPSGAAQNSYVAPALSPVANKPASNFDLLFDVSAPAPTSA VTQNNGGNIDLFSQMCEPNFSTPKPTAAAPAASAPTAGGLDLFDFGPAPVAQPTVMMS PMNAAPAAPAANNGFSGFDFGPSFGGSTPLQPMGAMEATPPASQPAASQINLGGPSPK VGNSFAGLDQFMSLSLGSTNANTTKAKTLNQMKGNQ" tRNA 1175044..1175116 /gene="CBG29074" /locus_tag="CBG_29074" /standard_name="CBG29074" /product="RNA transcript CBG29074" /note="C. briggsae predicted tRNA" CDS complement(join(1177755..1178043,1178116..1178222, 1178274..1178342,1178605..1178940)) /gene="CBG00275" /locus_tag="CBG_00275" /standard_name="CBG00275" /product="Protein CBG00275" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WML3" /protein_id="CAP21718.1" /translation="MVNAVIDGEDYLSTFLEEKFPWIKQMMIKMDVLYLNFLPEDVPV FLNAIQTMEPFQMRNFEIRNSNLEVFEAVMNRKIGRLDSVCLRGWGYCGYSSDNKIEN WMEDIVRSPQMENVPVLMFKEFGNVDIVTRLVKFWWNGAVSVDKEAYAYASNRNSFKP LRKLFLVNGASKPTSRTYILDMKDVSKQLYLEVFPNKRESRGVFIKVIQRGQRKVEAS IKMWYEKTDEEEWLAASLTGETEDIDNQNKVEDEEGFESEEDLTDTEL" CDS complement(join(1180807..1181086,1181159..1181259, 1181310..1181378,1181425..1181836,1181937..1182028)) /gene="CBG00276" /locus_tag="CBG_00276" /standard_name="CBG00276" /product="Protein CBG00276" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WML4" /protein_id="CAP21719.1" /translation="MEQNNEKPKEWSDLPNEVQSMVLPYLKFGDLVDIQRAGLIDQVK FKTGYLEYHCHMGQAFIDRQNYSSSFLKENCPWIKKMIIKMKVLYLNFLPKNVPAFLN AIRTMKPFEMENLEIRCSNLQLFEAIMKRKKNDRLDSVCLRGRGYEDYSSDNETDDWM EDIMQSPLMENVPVLMFQELGNVDIVTRLIKLWRTTDISMNKEAYAFNKHSFEPLRRY CMENGASKPTSRTYILDMKDVSKQLYLEVFPNKRESRGVFVKVVPKGQTHVEASIKNW YEITCDRESLAASYTGNEEDTDDEYEEYEEGFESDEDLTNL" CDS join(1183673..1183824,1183872..1184095,1184137..1184252, 1184441..1184513,1184562..1184991,1185309..1185897) /gene="CBG00277" /locus_tag="CBG_00277" /standard_name="CBG00277" /product="Protein CBG00277" /note="contains similarity to Pfam domain PF12762 ISXO2-like transposase domain contains similarity to Interpro domain IPR024445 (Transposase, ISXO2-like)" /note="Predicted" /db_xref="InterPro:IPR024445" /db_xref="UniProtKB/TrEMBL:A8WML5" /protein_id="CAP21720.2" /translation="MSAELVPNERECPECLNGKMSLVKDNALPLHFVWRCSSCKTSNI ITKKMIRENTFFQEQKLSVQKIVHIAADWVESPGRNNERTASLHGVTTSTIVNLNKLF RQLTEQWFERQIEKNSNFLLGGPGKIVEIDESHMYKAKYNRGHMLRRKSIWIFGMTER HTNKVAMFRVKQRDAATLLPIIRAHVKPGSMIVSDGWAAYGGIRTLQRAFTHRWVNHK VNFVDPSDRRVHTQSIEATWGAFKRELKAKYGVPEDQLDGYMSTYMFRRYFGRKKLLN HLLIEMKYYKKEYDYDSSESEISTDEALITTAVKTSPIPATRIMETTMMKTEQIVQKR KQFDSDRVSFAPKQRNERNNRAFTFSTRQTTMAARLNRNRNERRSSSTASTMRTTTSS KPEMIIKTNRPISSTTPRQTTTKTRKPRKKTQSRKADPTTTITTTATMRTTTTMRTRR TTSHQSRRTTTEPRTKRTTSAPETRQTTITTQKTRNDRRRRGRPTTTTPRSTTITPRF TTTTLKSTFTGRRKFKGRG" CDS 1186929..1187363 /gene="CBG27921" /locus_tag="CBG_27921" /standard_name="CBG27921" /product="Protein CBG27921" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEL6" /protein_id="CAR98346.1" /translation="MDKEEDEDRIWIEYLKGLEQLHKEFYGRWKAERRAKRREERKLI KEKIRRQKKQWKLAQDRSRAAKEKDRRYRKKVRASRRKKVQWLKKRNWLPMRIFHLFF WIRPMNMLICNASQICYWGLLSIEHHVSKYRSKKKRKKAFSR" CONTIG join(CAAC03003024.1:1..25206,gap(579),CAAC03003025.1:1..44729,gap (267),CAAC03003026.1:1..165253,gap(1000),complement (CAAC03000836.1:1..54292),gap(3787),complement (CAAC03000835.1:1..191108),gap(96),complement (CAAC03000834.1:1..92889),gap(605),complement (CAAC03000833.1:1..16666),gap(121),complement (CAAC03000832.1:1..35317),gap(313),complement (CAAC03000831.1:1..17400),gap(6939),complement (CAAC03000830.1:1..55252),gap(217),complement (CAAC03000829.1:1..7532),gap(89),complement (CAAC03000828.1:1..12112),gap(566),complement (CAAC03000827.1:1..62398),gap(594),complement (CAAC03000826.1:1..26938),gap(3549),complement (CAAC03000825.1:1..11727),gap(161),complement (CAAC03000824.1:1..147323),gap(1000),CAAC03002702.1:1..64711,gap (35),CAAC03002703.1:1..12067,gap(232),CAAC03002704.1:1..128846) //