LOCUS HE601298 1153984 bp DNA linear CON 17-SEP-2015 DEFINITION Caenorhabditis briggsae AF16 supercontig from assembly CB4, cb25.fpc0039. ACCESSION HE601298 CAAC03000000 CAAC02000447 VERSION HE601298.1 DBLINK BioProject:PRJNA10731 BioSample:SAMEA3138181 KEYWORDS . SOURCE Caenorhabditis briggsae ORGANISM Caenorhabditis briggsae Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 1153984) AUTHORS Howe K.L. CONSRTM WormBase Consortium JOURNAL Submitted (03-OCT-2011) to the INSDC. WormBase group, European Bioinformatics Institute, Cambridge, CB10 1SA, UNITED KINGDOM. REFERENCE 2 (bases 1 to 1153984) AUTHORS Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R., Waterston R.H. TITLE The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics JOURNAL PLoS Biol. 1(2), E45-E45(2003). PUBMED 14624247 REFERENCE 3 (bases 1 to 1153984) AUTHORS Ross J.A., Koboldt D.C., Staisch J.E., Chamberlin H.M., Gupta B.P., Miller R.D., Baird S.E., Haag E.S. TITLE Caenorhabditis briggsae recombinant inbred line genotypes reveal inter-strain incompatibility and the evolution of recombination JOURNAL PloS Genet. 7(7), E1002174-E1002174(2011). COMMENT Details of C.briggsae assembly version CB4: To improve upon the C. briggsae nuclear genome assembly CB3, 167 AF16/HK104 advanced-intercross recombinant inbred lines were successfully genotyped at 1,032 single nucleotide polymorphism (SNP) markers. The resulting data were used to estimate high-density genetic maps. Sequences were assembled by combining the physical and genetic positions of the SNPs to inform the process of ordering and orienting the cb25 supercontigs into chromosome assemblies. 37 of the cb25 fingerprint contigs were split into 100 supercontigs to resolve discrepancies between the physical and genetic orders of SNPs. 638 sequence supercontigs comprise the CB4 assembly. The total nuclear genome content decreased from cb25 to cb4 because of the removal of three supercontigs containing mitochondrial genome sequence (totaling 20.1 kbp). Assembly_name: CB4 Assembly_program: Phusion Seq_technoloy: capillary (whole-genome-shotgun) Seq_coverage: 10x Annotation details: Coding seqences below are the result of integration and manual review of the following data : computer analysis using the programs Genefinder (version 980506; P. Green, unpublished data), FGENESH (Salamov and Solovyev 2000), TWINSCAN (Korf et al. 2001), and the Ensembl annotation pipeline (Clamp et al. 2003); similarity to other proteins from BlastX analyses (http://blast.wustl.edu); sequence conservation with C. elegans using Jim Kent's WABA alignment program (Genome Research 10:1115-1125, 2000); individual C. briggsae GenBank submissions; and personal communications with C. briggsae researchers. tRNAs are predicted using the program tRNAscan-SE (Lowe, T.M. and Eddy, S.R., 1997, Nucl. Acids. Res., 25, 955-964). FEATURES Location/Qualifiers source 1..1153984 /organism="Caenorhabditis briggsae" /strain="AF16" /mol_type="genomic DNA" /note="supercontig cb25.fpc0039" /db_xref="taxon:6238" CDS join(159..325,367..526,574..745,798..1115,1165..1289, 1333..2797,2849..2951,3001..3118,3162..3290) /gene="CBG01851" /locus_tag="CBG_01851" /standard_name="CBG01851" /product="Protein CBG01851" /note="contains similarity to Pfam domains PF00069 (Protein kinase domain) , PF12330 (Domain of unknown function (DUF3635)) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR024604 (Domain of unknown function DUF3635), IPR000719 (Protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8WQN4" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/TrEMBL:A8WQN4" /protein_id="CAP22792.2" /translation="MPPKKAGTQKGPKKLTEEQKQRNLFNRRKKESHFCVVNEYHEYS LFASRYDRPEPKFKEKKVPQKKPQQSKRNVFPDVSVEHVSSDEEDAGNFEIPDKVDDE DEQYRKLAAQYNVSEYSSMEVYNEEGFQCEWNGRGRFVKKEAQPPPESRPGPSVETVG NFPMMNKPAKKNEVIATMKKAKKADAQALVSKPVLNFKMSACMTFQLNVAKARSGFLI TFQKTSPLISEIAEENRRPPEFRVFNTPTRNRILTSRMNNSQYPPQSDRPLMLSYTPP RENLTQDIENIDGSLNFDPKAFSTPIDKEPKTKRRTHRFLDDSYEDEPERYEPEEEVF NEPSEFPEKTNNEKSMEIHHPVQISTFDPTREIEKEEPEKLSSSINRKAETSVTELLE DAEEDNEASKLQPDESKYAKKRQRTASPETMCQGASTLMNTQNDGLDLGLDLMSGVND KEEEAARVKKRGTLQPQKRQLDRESRCPRQSTMSIGSNNDSIMSAMEEMSLDQKLMDT LGDDLGQSNLTESRAESRNAPTAMTIRHEDESVIPFYLADATVHVEPTTMLQLLHVAG QKEIKTWNDLPQTAFKPRTIKKLGEGSYGEVFATNWDGEKVAIKVVPFEADKNNRLYT GEYHSEQMQPADEILPELIVMKELNQLRDMDGVHSTPNFIKLISAEIVVGEFPSGMLK AWERYAKTVKESENTHPKIYSSEQQKSIVFVSGNGGIALEDFVLKSEEEIFSILHQII ISMMVAEEALSFEHRDLHLGNILIDRNGDQEVLYKFNNEKFALKTHGLKVSIIDFTLS RISKEGTTVYLDLENDPDIFKGEGNPQFDVYRQMRENNGGEWMTFNRRTNLMWIVYIA NSLTDDPICPEGLITDERKEELRQYFAELGSFDTCCDSLTTESFFEKFYDGYVGAIIQ DSEE" CDS join(4541..4849,4895..5106,5344..5443) /gene="Cbr-scl-2" /locus_tag="CBG_01850" /standard_name="CBG01850" /product="Protein CBR-SCL-2" /note="C. briggsae CBR-SCL-2 protein; contains similarity to Pfam domain PF00188 Cysteine-rich secretory protein family contains similarity to Interpro domains IPR014044 (CAP domain), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1-related)" /note="Predicted" /db_xref="GOA:A8WQN5" /db_xref="InterPro:IPR001283" /db_xref="InterPro:IPR002413" /db_xref="InterPro:IPR014044" /db_xref="InterPro:IPR035940" /db_xref="UniProtKB/TrEMBL:A8WQN5" /protein_id="CAP22793.1" /translation="MKLLLFLTLFISSYADFGFTGQNGIINAHNTLRSKIAKGTYVAR GTQKPSGTNILKMKWDTTVAASAQSYANRCPTGHSGTGGLGENLYWYWTSGSLGDLNQ YGAAASAAWEKEFQDYGWSSNLLTMDLFNTGIGHATQMAWAKSNLIGCGVKDCGRDTN GLNKVTVVCQYKPQGNYRNQYIYLSGQTCSACPSGYSCERSTGLCV" CDS join(6590..6632,6679..6815,6859..7214,7263..7362) /gene="CBG01849" /locus_tag="CBG_01849" /standard_name="CBG01849" /product="Protein CBG01849" /note="contains similarity to Pfam domain PF00188 Cysteine-rich secretory protein family contains similarity to Interpro domains IPR014044 (CAP domain), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1-related)" /note="Predicted" /db_xref="GOA:A8WQN6" /db_xref="InterPro:IPR001283" /db_xref="InterPro:IPR002413" /db_xref="InterPro:IPR014044" /db_xref="InterPro:IPR035940" /db_xref="UniProtKB/TrEMBL:A8WQN6" /protein_id="CAP22794.2" /translation="MHTTTIFLLATLQLGVYAQFKSSTQQFIVDIHNTLRSKIAKGTY VAQETTKPAGTNLLKMKWDTTLATSAQTYANTCPTGHSNLAGTGENLYWRWSSLPFSG LDVYGGAAAVAWEQEFQTDGWTSNAFTQALFDTGIGHATQMAWASTGLIGCGVKNCGV DATKNNYNKVTVVCHYKSIGNVLGQDIYKSGTTCSVCPTGTTCETATGLCV" CDS join(12902..12938,12984..13120,13173..13525,13573..13672) /gene="Cbr-scl-5" /locus_tag="CBG_01847" /standard_name="CBG01847" /product="Protein CBR-SCL-5" /note="C. briggsae CBR-SCL-5 protein; contains similarity to Pfam domain PF00188 Cysteine-rich secretory protein family contains similarity to Interpro domains IPR014044 (CAP domain), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1-related)" /note="Predicted" /db_xref="GOA:A8WQN7" /db_xref="InterPro:IPR001283" /db_xref="InterPro:IPR002413" /db_xref="InterPro:IPR014044" /db_xref="InterPro:IPR035940" /db_xref="UniProtKB/TrEMBL:A8WQN7" /protein_id="CAP22795.1" /translation="MKTLLLLATLFIGAYAQFTSNGQAAILNVHNTLRSKIAQGKYVA KGTTKPAGNNILKMKWDTATATSAQNYANTCPTGHSGAAGLGENLYWSWTSATITNID SYGAAASAAWEKEFQDFGWKTNLLDMALFNTGIGHATQMAWAKTNLIGCGVKNCGKDP KNGLNKVAVVCQYKPQGNYLNQNIYTTGATCSACPTGTKCETASGLCI" CDS complement(join(14305..14361,14412..14481,14528..14720, 14765..14903,15011..15157,15204..15567,15654..16138, 16183..16862,18327..18501,18546..18875)) /gene="CBG01846" /locus_tag="CBG_01846" /standard_name="CBG01846" /product="Protein CBG01846" /note="Predicted" /db_xref="GOA:A8WQN8" /db_xref="UniProtKB/TrEMBL:A8WQN8" /protein_id="CAP22796.1" /translation="METRTEYQKGLINLIYTLSSDGARFKRLSKRAAIPVLLRVEGVD VETRTGGKCLTLVSMTYSEGGVQKNMLDAFVRSSLDILKDMDLRVEMDGTTITFRMTL MSYICDMKESYAISGLPNWYNIEGCSKCSITGVKIGNGKVSSEDEIYKLLKKIKSNNT LTPDDIPSKISILCHHVPFCLFILFFILFSFYSSTYFLRNKYNTIQYNCCGRKKKGKR DECEACLKPTSRLSDTVTMIICNVQWQLMNILKYHGKEILYAHKRIHEGQETFHGTDV RRFSGYRCEMETRTEYQKGLINLIYTLSSDGARFKRLSKRAAIPVLLRVEGVDVETRT GGKCLTLVSMTYSEGGVQKNMLDAFVRSSLDILKDMDLRVEMDGTTITFRMTLMSYIC DMKESYAISGLPNWYNIEGCSKCSITGVKIGNGKVSFNEMYTSPQRTDDSILYSAEKG IRGYTKPGVPVVFQFINPSKLTLDPFHLRGAGVCKYIVEEVTKPTRWNTLKLKRKVLD EMAEALNDVKEYTLDPVKMLNLKKVGKSTGREIDKLSIHISAYLGWTEGPHIPDQLRN VKTESPHYPSTPSRKRPQQVDLRGSNQPQEVSPSILISASLDGSIKNGKLDILSAGRA LHTAYQSGQYGIPEDVESFLTKHSLDVPLPKLPQSVFTGLTPEAGALLHGYGIVAQLS LNAVQKLLSEQKSTQKISGEQLFGISDAPFAVKLRCNYPDFPPFSNYLFDILGKSCTV QTDIQRFWLIPGERKTSYGTPSPFPKELYDNLYKLFLDFFQLDDQLFDEPEYRSEFGN SRLLKNYATEEAKKKKFVQVSSAKKSFKTNTFRAQFKNALKELRLGTFIIADGSSQGY FARRKRHIAKSKAHEAGEEEEES" CDS complement(join(21280..21647,21739..21837,21886..21919)) /gene="CBG01845" /locus_tag="CBG_01845" /standard_name="CBG01845" /product="Protein CBG01845" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WQN9" /protein_id="CAP22797.1" /translation="MSRWKRHRKKIVMESRNEDFELWKDNEEEESSLRPATRNTTNEM SQVDFGENLEDVDYDCLLPMMNYERREIQDFDIRISGYINFVLSEGLSENSMDRLDGM MSVINGAPPPVSLGVIKRELELLRNEVILEMNFYCHCCGRKKKGKRDECEACLKPEMM PETNVT" CDS join(22694..22867,22908..23263,23314..23413) /gene="CBG01844" /locus_tag="CBG_01844" /standard_name="CBG01844" /product="Protein CBG01844" /note="contains similarity to Pfam domain PF00188 Cysteine-rich secretory protein family contains similarity to Interpro domains IPR014044 (CAP domain), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1-related)" /note="Predicted" /db_xref="GOA:G2J6C8" /db_xref="InterPro:IPR001283" /db_xref="InterPro:IPR002413" /db_xref="InterPro:IPR014044" /db_xref="InterPro:IPR035940" /db_xref="UniProtKB/TrEMBL:G2J6C8" /protein_id="CAP22798.1" /translation="MRSLLILVTLCGYSYCQFSSTGQKNIVDAHNRLRSSIAKGTYIV KGTKKPAGSNILKIKWDKTVATSAQSYANKCPTGHSKGTGYGENLYWRWSTSSPKDLN EFGLRASDAWSSEFGKYGWKTNKMDRALFGSGVGHATQMAWANTGGIGCGVKNCGKDK TKNGMYKVVVVCQYKGPGNYMGQDIYKSGKTCSSCPSKTKCEKSTGLCV" assembly_gap 24413..25412 /estimated_length=1000 /gap_type="between scaffolds" assembly_gap 33804..34246 /estimated_length=443 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(35158..35202,35250..35344,35393..35569, 35700..35758,35805..35899,36311..36431,36484..36704)) /gene="CBG01840" /locus_tag="CBG_01840" /standard_name="CBG01840" /product="Protein CBG01840" /note="contains similarity to Pfam domain PF07974 EGF-like domain contains similarity to Interpro domains IPR013032 (EGF-like region, conserved site), IPR013111 (EGF, extracellular)" /note="Predicted" /db_xref="GOA:A8WQP1" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR013111" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR036179" /db_xref="UniProtKB/TrEMBL:A8WQP1" /protein_id="CAP22799.2" /translation="MRAKRIRRTAEQSMLPTYELVLDPEEEARAITKTLENIEKGSQL MLKCTMAQEHFENLVFRANNVEVGDSNGQSKTVTIDSFSRIHTGMYECGATRKKDGKY HSRQMRVKQKRDNNSNLPPCSSDDDGFCGMNGICLMDGSRKICHCDDGYMGETCDKVL MAAYDVKLLKVVGGTTTSLNIICIMFALFFALLFFKERKTTKRLRREFGKVAEECCEM ENAIYKETTTNNNSDDSSDGTTSFARNSIRKMRLALNRARLNGTSDSKLLEK" CDS complement(join(42005..42155,42201..42479,42527..42720, 47144..47338)) /gene="CBG01838" /locus_tag="CBG_01838" /standard_name="CBG01838" /product="Protein CBG01838" /note="contains similarity to Interpro domain IPR007087 (Zinc finger, C2H2)" /note="Predicted" /db_xref="GOA:A8WQP2" /db_xref="InterPro:IPR013087" /db_xref="UniProtKB/TrEMBL:A8WQP2" /protein_id="CAP22800.2" /translation="MMNYERREIQDFDIRISGYINFVLSEGLSENSMDRLDGMMSVIN GAPPPVSLGVIKRELELLRNEWENLECPKCHRKVENSDVLTEHLVSNHGKTQDKVWFK QFGTLGSDMAKSLDKALRKQEETSLVKKKFGDSNDLITCPVASPLAPFFMMRHFQVFR DEMCPSATEGIVVGITVPIQSVELLNLMLQNDEKSFSPIFCFQKLDKARRRIKRGLLR KTMEKKVKILEKRCDKVSVDEPDIVFKKSRTADETRDLLQALQSATNGISERYR" assembly_gap 43223..44222 /estimated_length=1000 /gap_type="between scaffolds" assembly_gap 45388..46037 /estimated_length=650 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(48441..48614,48655..49010,49061..49160) /gene="CBG01837" /locus_tag="CBG_01837" /standard_name="CBG01837" /product="Protein CBG01837" /note="contains similarity to Pfam domain PF00188 Cysteine-rich secretory protein family contains similarity to Interpro domains IPR014044 (CAP domain), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1-related)" /note="Predicted" /db_xref="GOA:G2J6C8" /db_xref="InterPro:IPR001283" /db_xref="InterPro:IPR002413" /db_xref="InterPro:IPR014044" /db_xref="InterPro:IPR035940" /db_xref="UniProtKB/TrEMBL:G2J6C8" /protein_id="CAP22801.1" /translation="MRSLLILVTLCGYSYCQFSSTGQKNIVDAHNRLRSSIAKGTYIV KGTKKPAGSNILKIKWDKTVATSAQSYANKCPTGHSKGTGYGENLYWRWSTSSPKDLN EFGLRASDAWSSEFGKYGWKTNKMDRALFGSGVGHATQMAWANTGGIGCGVKNCGKDK TKNGMYKVVVVCQYKGPGNYMGQDIYKSGKTCSSCPSKTKCEKSTGLCV" CDS join(50081..50254,50298..50650,50706..50805) /gene="CBG01836" /locus_tag="CBG_01836" /standard_name="CBG01836" /product="Protein CBG01836" /note="contains similarity to Pfam domain PF00188 Cysteine-rich secretory protein family contains similarity to Interpro domains IPR014044 (CAP domain), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1-related)" /note="Predicted" /db_xref="GOA:A8WQP4" /db_xref="InterPro:IPR001283" /db_xref="InterPro:IPR002413" /db_xref="InterPro:IPR014044" /db_xref="InterPro:IPR035940" /db_xref="UniProtKB/TrEMBL:A8WQP4" /protein_id="CAP22802.1" /translation="MRSLLILVTMCGYSYCQFSSTGQKNIVDAHNKLRSSIAKGTYIA KGLKKPAGSNILKIKWDKHVAASAQSYANTCPTGHSKSVDRFGYGENLFWSWAPNFPP KDLNVFGVHASGAWSGEFTKYGWKTNKMDGALFRSGVGHATQMAWANTGGIGCGVKSC GKDKKTVVVVCQYKGPGNYMGQDIYKSGKTCSSCPPKTKCEKSTGICV" CDS join(52101..52143,52196..52332,52377..52726,52779..52878) /gene="Cbr-scl-6" /locus_tag="CBG_01835" /standard_name="CBG01835" /product="Protein CBR-SCL-6" /note="C. briggsae CBR-SCL-6 protein; contains similarity to Pfam domain PF00188 Cysteine-rich secretory protein family contains similarity to Interpro domains IPR014044 (CAP domain), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1-related)" /note="Predicted" /db_xref="GOA:A8WQP5" /db_xref="InterPro:IPR001283" /db_xref="InterPro:IPR002413" /db_xref="InterPro:IPR014044" /db_xref="InterPro:IPR035940" /db_xref="UniProtKB/TrEMBL:A8WQP5" /protein_id="CAP22803.1" /translation="MLISFFVLASFLLIGTECQFSSNTQQFIVDLHNSFRSKIATGTY SINETTKPTCSNMRKMSWDSSLATSAQTYANTCPTTHSNLAGTGENFYMRTTSANIGG LDVYGGSAAMAWQQEFQKFGWATNYFDMNLFNTGVGNATQMAWAKTSLVGCGVKNCGK DASGMNRVSVVCHYKPLGNYLDQMIYVSGFTCSQCPTGTACDQTTGLCG" CDS join(53562..53735,53780..54135,54183..54282) /gene="Cbr-scl-8" /locus_tag="CBG_01834" /standard_name="CBG01834" /product="Protein CBR-SCL-8" /note="C. briggsae CBR-SCL-8 protein; contains similarity to Pfam domain PF00188 Cysteine-rich secretory protein family contains similarity to Interpro domains IPR014044 (CAP domain), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1-related)" /note="Predicted" /db_xref="GOA:A8WQP6" /db_xref="InterPro:IPR001283" /db_xref="InterPro:IPR002413" /db_xref="InterPro:IPR014044" /db_xref="InterPro:IPR035940" /db_xref="UniProtKB/TrEMBL:A8WQP6" /protein_id="CAP22804.1" /translation="MQSVVLLTLLCVGAYANFGEGGKQAIVNHHNNVRSKIAKGEYVA RGTRKESGTNMLKMKWDGSLESSAQGYANSCPTGHSTIPSIGENLYYYWSGSPISNLD QFGGMASAAWESEFQDFGWGSNKFTMSLANTGIGHATQMAWALTDKIGCGIKMCGPDA SKGGMNRVALVCHYKIQGNYLFKSIYNSGATCSACPSGTRCEQSSGLCA" CDS complement(join(54377..54543,54949..55129,55176..55290, 55559..55827,55875..56149,56193..56302,56348..56525, 57093..57216,57262..57336)) /gene="CBG01833" /locus_tag="CBG_01833" /standard_name="CBG01833" /product="Protein CBG01833" /note="contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domain IPR011701 (Major facilitator superfamily)" /note="Predicted" /db_xref="GOA:A8WQP7" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR020846" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8WQP7" /protein_id="CAP22805.2" /translation="MSSVSPKQSEEGDGEKKSNTMENIKHIPFFFIFLCTLCMSSIYS NPTVYQSTINFLHEFRNSSESDFYEEVDNQYDPEKQTSRDVIVKYVYYLSNPQKESLI TVTSVGTVLAATPITYAYNNMGFRRSFVMCAFISIIPALFFPICVNAKTYLLAIILRI FQGCSLAAFIPYVCKLSVFIPFDHITVPIIVFAYSHISEIFVHPIVSHMASSSLGWHS AHYGAVITILIIFFVFVLIHFDEDFKERAGTIGFCNAMFEYERTRSRTFDLRIPYLSI YQDFRIWVIFFTSFAYGCALQLFYQFGPTFFHKVVGHSEISSAYFTIIAPILNLITSC SSVYLYGKLANSEQNKMRFFNTVAFGTCGIFLFALGFFDPVHHKYIVTVMFILASSLL GCSYAGHLRMNQLRSGHLHLFLLVNIFIVNSAAMFFSSLLNVLIAKNTDYSSWSTLFI VHAIFLIIANIIFFFFCSSERANWAKEGYEDSSIQPYRDEPLPQFPL" assembly_gap 58082..58203 /estimated_length=122 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(60766..60846,61137..61289,61341..61435,61488..61703, 61931..62050,62102..62174) /gene="CBG01832" /locus_tag="CBG_01832" /standard_name="CBG01832" /product="Protein CBG01832" /note="Partially confirmed by transcript evidence" /db_xref="UniProtKB/TrEMBL:A8WQP8" /protein_id="CAP22806.1" /translation="MCITRSLTYLALLAVANASTASDPIDSISSQGADILNRAKLTGQ TVRQCSCTEQRVCVEEMKIQAKDCTVPCFQKFSSITSRPNDLKKCFDEKDNILEDFLT CFENRVEACVADQHGPQIQKTDIRGIFKVTEKSIATQTNTFQTMIKPIKHILDATGDF ALCVKDCFLEKNKSGFCFDRKGCQPLVAETKARQSFRACTKKMHWKREAGELCECSVN AGVEELRQYCAMFKLMGRRAPMRKSRG" CDS join(65151..65441,65486..66301,66349..66613,66669..66763) /gene="CBG01831" /locus_tag="CBG_01831" /standard_name="CBG01831" /product="Protein CBG01831" /note="contains similarity to Pfam domains PF07690 (Major Facilitator Superfamily) , PF00083 (Sugar (and other) transporter) contains similarity to Interpro domains IPR021184 (Tumour necrosis factor, conserved site), IPR011701 (Major facilitator superfamily), IPR005828 (General substrate transporter)" /note="Predicted" /db_xref="GOA:A8WQP9" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR020846" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8WQP9" /protein_id="CAP22807.1" /translation="MVNSQEDYISVTVLFVVNLLNYVDRYTVAGVLTAVQTYYNISDS LGGLIQTVFLISFMVFSPICGYLGDRFNRKWIMIIGVGIWLGAVLGSSFVPANHFWLF LVLRSFVGIGEASYSNVAPSLISDMFNGQKRSTVFMIFYFAIPVGSGLGFIVGSNVAT LTGHWQWGIRVSAIAGFIVMIALVLFTYEPERGAADRANGDAKDTVVATNTTYLEDLV ILLKTPTLVACTWGYTALVFVSGTLSWWEPTVIQHLTAWHQGLNDTKELPTTDKDRVA LYFGAITTAGGLIGVIFGSMLSKWLVAGWGPFKRFQTERAPPLVSGGGALLAAPLLLI GMIFGEMSLVLLYVMIFFGLTFLCFNWGLNIDMLTTVIHPNRRSTAFSYFVLVSHLFG DASGPYLIGLISDLIRHGSTLPKDQYHSLVTATYCCVALLLISAGLYFVSSLTLVSDR RKFRMEMGLDDLQSKPIRTSTDSLERIGANDEVMSSRL" CDS complement(join(66901..67593,67844..67981)) /gene="Cbr-col-132" /locus_tag="CBG_01830" /standard_name="CBG01830" /product="Protein CBR-COL-132" /note="C. briggsae CBR-COL-132 protein; contains similarity to Pfam domain PF01484 Nematode cuticle collagen N-terminal domain contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal)" /note="Predicted" /db_xref="GOA:A8WQQ0" /db_xref="InterPro:IPR002486" /db_xref="UniProtKB/TrEMBL:A8WQQ0" /protein_id="CAP22808.1" /translation="MSNNLICAAVSVSSILVVGYITAGLLIFVDFRTFYSSALDDVAE FNRFATEAWDDMIEINRSVVRQKRSGESKCGCMNKVNNCPAGPTGPPGEPGAPGDDGW NGDAGQPGPDFPLFDQSLIYQRPPCIRCPAGEPGPPGPDGEPGEQGPPGAPGVDNYEV GKDGLPGVEGEPGDAGAPGEDGEPGMVGAPGASGTRGIGMPGAPGAPGMAGIEGLPGK DGEPGIPGPEGEEGPTGEPGLDGEQGTEGEPGPEGPPGSPGPDAAYCSCPLRSARLLF " CDS complement(join(68211..68297,68344..68901,68946..69163, 69211..69444,69499..69559,69608..69673)) /gene="CBG01829" /locus_tag="CBG_01829" /standard_name="CBG01829" /product="Protein CBG01829" /note="Predicted" /db_xref="InterPro:IPR018800" /db_xref="UniProtKB/TrEMBL:A8WQQ1" /protein_id="CAP22809.1" /translation="MGLVDYAGSDSDSEQEEETKPKISTPSEKQESNNEESFFEDIGS SSAGEKHSLNAEDALEEIVKPKDWEIKMAEKARKKLEKKALKKAQKEKRKKEKKLAKK ARKGDKIPRVSGGIQKEKGKIVISAFGALPGIGGDDSSDDSDSEEKREVTAKPTVGRG FLSNLPAPKGRDNRSDGSNVFDKSLIPHSVAKKTPAATPVFKPAPSPKKLEESDDDDD ELTDFFGFSSTPARKEMESAPEIPFMAMNSSMDVVGPSRPTEEDEVDPSQMYMPEEDD SQEGTSASNAWLHRKISDEQAHKLLMRFSHDIGSEERRSINEMANSIVDVNVDDALGP DVKTNIIKNLGHRAFVEATSAPIPQVQTQGQTSRRKHQITYLASLAVAREEQLKDQWA EQKQSKRMARQKYGF" CDS join(69923..70057,70112..70298,70344..70776,71195..71529, 74623..74834) /gene="CBG01828" /locus_tag="CBG_01828" /standard_name="CBG01828" /product="Protein CBG01828" /note="contains similarity to Pfam domain PF02037 SAP domain contains similarity to Interpro domain IPR003034 (DNA-binding SAP)" /note="Partially confirmed by transcript evidence" /db_xref="InterPro:IPR003034" /db_xref="InterPro:IPR036361" /db_xref="UniProtKB/TrEMBL:A8WQQ2" /protein_id="CAP22810.2" /translation="MPAKTQKLEENDVFNMTCDKLRKELKKKRLSVVGKKSDLQFRLV EFLNNQREAEQQAPIDEEPEEQPQADQPQDEIDEPMDTDEPETPLNRTFTVEESSTER ENRPTHEQTPTNAVGLVLDEDAKREMCGNLGIDLHNFEVKSRTRTHRASGRKSLRATT VSPDQSPEKVEEPIVAAREVTPVRQRARPPSKDRFAMIHAREMEKEETLGERRERMQK RHDDLTSNVSESIRRLATPKSVKKREPLDRSANRSAGRNWTVQNPAKMTFNFGQNDVS DFAAVASARQEAGPSSSSVMTTVAKKPASRARAHVDVKKLTKIPGPSRNTSTPSRGIS AKTVIPATVADDNTFTDYISTPKGTTPSRVPKRAGYTPHTSKKVFVDTTQLTDREYNL AMEEGLIPGKLATKSNLENRQIANKKRRDDIIALKRKMNIQ" CDS join(75079..75254,75299..76010,76054..76230) /gene="Cbr-rfc-3" /locus_tag="CBG_01827" /standard_name="CBG01827" /product="Protein CBR-RFC-3" /note="C. briggsae CBR-RFC-3 protein; contains similarity to Pfam domains PF06144 (DNA polymerase III, delta subunit) , contains similarity to Interpro domains IPR019483 (DNA polymerase III, clamp-loader complex, subunit E, C-terminal), IPR010372 (DNA polymerase III, delta)" /note="Predicted" /db_xref="GOA:A8WQQ3" /db_xref="InterPro:IPR008921" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8WQQ3" /protein_id="CAP22811.1" /translation="MALWVDKYRPKELLGKDGVDYHLEQAKHLKFLSADCMPHLLFCG PSGAGKKTRIKCLLRELYGVGVDKTQLIMKAFTTPSNRKLEIQTVSSNYHVEMTPSDV GIYDRVVVQDLVKEMAQTSQIEASSQKSFKVVVLCEADSLTRDAQHGLRRTMEKYANN CKIVLCCESLSRIIEPLQSRCIIINVPAPTDVEVEKVLRKVIQKENLNMPDSVLQKIV EKSEGNLRRAILMTEAIKMENEGGIPANAQIPVPEWEVYIQETARLILQKQTNDMALK VRERLYEVISRLIPPHVIFKKLLEYLLPSCPSSIVREVVSEAAKFEHRLLLGQKPIFH LEAFVIAFMEIYLTNASKAK" CDS complement(join(76455..76592,77819..78046,78125..78369, 78421..78585,78636..78731,78775..79133,79178..79272)) /gene="Cbr-dli-1" /locus_tag="CBG_01826" /standard_name="CBG01826" /product="Protein CBR-DLI-1" /note="C. briggsae CBR-DLI-1 protein; contains similarity to Pfam domain PF05783 Dynein light intermediate chain (DLIC) contains similarity to Interpro domains IPR022780 (Dynein family light intermediate chain), IPR008467 (Dynein 1 light intermediate chain)" /note="Predicted" /db_xref="GOA:A8WQQ4" /db_xref="InterPro:IPR008467" /db_xref="InterPro:IPR022780" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8WQQ4" /protein_id="CAP22812.2" /translation="MSLTTQQQELDDTANAVLPVLYSSTDDEVGIWREVLASKKTNTN QGSTVIVLGDNRCGKSSLLARLDKSDRSSKPKSLLGYRVLHVQNDARDASYAYQLGTA GANLNPSELLQIPVWSLDGNESCASLLKYALPATPSEVVFILSASIDNPNLINSLKRW ANVCTEQAQKHFSKEDLKAGRNQQERMWQEYVDPVQSHMSTSVVGSFADEHSLLPLDQ GTLIENCGVTFMVVITKSDLGKEFTDAQFAKISIQLRKLCLSLGATLIFTSTKESKNI QLLQKYIVHRSFGTAFTSAAQVIERDSIFVPAGWDGEKKIDIIRESIPDADAALEPTR DKLRPVAKEQLIEAEEDQAFLKKLMDTLATSTTSSGPKQRTMQEEPADKDSPLANFFS NLLKDKPNKPAVPATSAQPMDSAATQAQLDRLLKSAQSSKAQASRDSDA" assembly_gap 76664..77373 /estimated_length=710 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(79613..79639,79686..79800,79847..79963,80095..80180) /gene="Cbr-exos-4.1" /locus_tag="CBG_01825" /standard_name="CBG01825b" /product="Protein CBR-EXOS-4.1, isoform b" /note="C. briggsae CBR-EXOS-4.1 protein ;" /note="Predicted" /db_xref="GOA:H8WH60" /db_xref="InterPro:IPR004217" /db_xref="InterPro:IPR035427" /db_xref="UniProtKB/TrEMBL:H8WH60" /protein_id="CCG58552.1" /translation="MNSIQNIQQLREFLTVYNTLSERCFNACARDYTTSTLTKDEGSC VSQCIDKQMLVNRRFMLVFAEQAPKALFKQGEQSPTEAIKSASWFPYGRKTSSTNSQY QHSSRFEQECGR" CDS join(80077..80208,80256..80666,80718..80897) /gene="Cbr-exos-4.1" /locus_tag="CBG_01825" /standard_name="CBG01825a" /product="Protein CBR-EXOS-4.1, isoform a" /note="C. briggsae CBR-EXOS-4.1 protein; contains similarity to Pfam domain PF01138 3' exoribonuclease family, domain 1 contains similarity to Interpro domains IPR001247 (Exoribonuclease, phosphorolytic domain 1), IPR018336 (Ribonuclease PH, conserved site)" /note="Predicted" /db_xref="GOA:A8WQQ5" /db_xref="InterPro:IPR001247" /db_xref="InterPro:IPR015847" /db_xref="InterPro:IPR018336" /db_xref="InterPro:IPR020568" /db_xref="InterPro:IPR027408" /db_xref="InterPro:IPR036345" /db_xref="UniProtKB/Swiss-Prot:A8WQQ5" /protein_id="CCG58551.1" /translation="MSIISEHGFRMDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTK VLCAVYGPYESKASKRLEDRCAIVCQYSTTTFSGLERKNRPRGDRKSTEISRLLEKAF ESVILTESFPRSQIDIFCEVIQGDGSNLAACVNATSLALADAGIPMKGIASAATCGIV ETKPIVDLTSREETDLLPRVTLATICGRDEVILVELQNRLHIDHLSVVMDAAKATCAD VYECLAVVAQQHLKACAPILGN" CDS join(<81225..81311,81356..81602,81647..81776,81828..82511, 82559..82865,82909..82995,83044..83189,83399,83402..83527, 83573..83679,83724..83834,83879..83996,84040..84265, 84339..84435,84480..>84603) /codon_start=1 /gene="CBG01824" /locus_tag="CBG_01824" /standard_name="CBG01824" /product="Protein CBG01824" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WQQ6" /protein_id="CAP22814.1" /translation="DFLHTISSATTHGSVKNITVLETAPEFFKWLEQNPVKSVENFIN AARLSINVKSEDQSKVFLRINKIATSILPSFYGTLGPKEIVEMLRFALQINTKNNISS DIQKLFLEKNFKTVDLHDVSFHTLVMLIRYSDSSVDQKVLDTITDSVLLRIEKELGNA ADLLTILAGEGVTRSKWFYNAAFIRAAEKLVPVMGLPEKCALLKHMSIHRQRNRQLLG AIVHSISTSNQCLSIPQVVSVVSACASLTYYPPKIAKKISDDLMKNSNVLDNWNDIIV ITDSFVRMRMGDQNSWKLLVRWANENVKQANVVQLSRFVSGLARIGEPSGKPLAKVLR PLLAKERALKQTAWLNTVYSLAYFQELDESLADSVLNKSFVDQVMSSTMEVHDRLRKA MTLMLISSAARVDMQDKYHGPTVNKATFASYGITFDAKTIRNARQLKYSSNSVECDGI FLKSLFKIAPQDTHCSLPNVEECGAFVDAYVMPDEKSELLVNTSQWGTKKPRPLFFYG WMQTKQNVSNMTSEDNILGQEQLGLRLIRAQGYSPVVVFKSEFDYCSSDIEKVNITMD VVTLPTSLNSQADVCVIADDLLRMVDGKSKQGTIYCVFTEDVVLQQPFKLFYYTKLKS VTQLNNDFIKNHGFPMWSDYHSASHPRMARRNGDYIKFNFFQGPNGRNDGIIYTWTDF HGGEHARLPTQSEFQLLRAPNRDNKNLYMTITAESTTVMLLSEKSFGSYLLMKENQRK IEKNHVTCMIVQDCSVAMTMFKKCGHAVCEMCWARNLIEKEKSNVTEIKCPSYQIIRL KLRQGPCPIDMCTPDASTYGAVLVPCGCRIHCKHLVDACTKYKNNPDDLARKLKSCPY DACKKMVEEV" CDS join(85047..85280,85327..85524,86319..86324) /gene="CBG01823" /locus_tag="CBG_01823" /standard_name="CBG01823" /product="Protein CBG01823" /note="Predicted" /db_xref="InterPro:IPR032862" /db_xref="InterPro:IPR037151" /db_xref="UniProtKB/TrEMBL:A8WQQ7" /protein_id="CAP22815.2" /translation="MSQAANFPENIQKFIVKSAPPTMIYIPNWIDEDEEQLYKSCIEN APQPKWRVLANRRLQNYGGVVGKSALIPSDDFPVELKYLMTKINDLGIFKNPVNHVLV NEYAPGQGIMPHTDGPAFHRIVTTVTIGSHCFLDMYMPVDQEP" assembly_gap 85629..86269 /estimated_length=641 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(86435..86827,86875..87520,87569..87703, 87754..87932)) /gene="CBG01822" /locus_tag="CBG_01822" /standard_name="CBG01822" /product="Protein CBG01822" /note="contains similarity to Interpro domain IPR000615 (Bestrophin)" /note="Predicted" /db_xref="GOA:A8WQQ8" /db_xref="InterPro:IPR000615" /db_xref="InterPro:IPR021134" /db_xref="UniProtKB/TrEMBL:A8WQQ8" /protein_id="CAP22816.1" /translation="MTINYHKEIMTSHPWTFFLLLFKWKGSIWKAVYMETIIFLIFYG IISVIYKTALGESSQRTFEAVVRYFDKRLSYIPLEFVLGFFVTTVVNRWTKLYQTIGF IDNVGLMANCYIRGATEKARIYRRNIMRYCELVQVLVFRDMSMRTRRRFPTMETIVAA GFMNKHELELYNSYDTKYNSKLGTKYWIPANWALCMTNKARKDGYIESDYFKAQMEAE IRTWRTNIEWVCNYDWVPLPLMYPQLVCLAVNLYFLVSIVARQLVVEKHKIVDEVDVY FPVMTFLQFIFYMGWLKVIDVMLNPFGEDDDDFETNALIDRNITMGLMIADNPMTTPD LRKDPFYDEVDVPLLYSEESSHVPNHHYHGSASEVRLEHRGSGPVTMMPHSQSAANLK RIMSFKSSEDDEEKTNPFSMSHDDARMRNWREVSLDSSFLSDLNENKEWKLPTSQQKF " CDS join(88755..88799,88995..89258) /gene="CBG26431" /locus_tag="CBG_26431" /standard_name="CBG26431" /product="Protein CBG26431" /note="Predicted" /db_xref="InterPro:IPR032862" /db_xref="InterPro:IPR037151" /db_xref="UniProtKB/TrEMBL:B6IEW8" /protein_id="CAR98448.1" /translation="MPEIIPSNTFLTTNMVVKSEQERYVGSMLLEPRSLFIMTDDAYT TMLHGITEREDDLVEPGKVFNCTEELANKRLERDTRISITVRNVEKVSKLSVMDMLKK " CDS join(92804..92868,93812..93972,94025..94176,94229..94330, 94559..94741,94945..95055,95104..95186,96693..96819) /gene="Cbr-unc-30" /locus_tag="CBG_01820" /standard_name="CBG01820" /product="Protein CBR-UNC-30" /note="C. briggsae CBR-UNC-30 protein; contains similarity to Pfam domain PF00046 Homeobox domain contains similarity to Interpro domains IPR016233 (Homeobox Pitx/unc30), IPR017970 (Homeobox, conserved site), IPR001356 (Homeobox)" /note="Predicted" /db_xref="GOA:A8WQQ9" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR016233" /db_xref="InterPro:IPR017970" /db_xref="UniProtKB/TrEMBL:A8WQQ9" /protein_id="CAP22817.1" /translation="MDDNTSTLTALHQHQQQQSHNRFPHSLVCVGPLDHHPLLPEQSL SSSLAPLTHNPYAFNYPIPLAPTEITTKLPKLELMALDVKQEHEDAIHNESASPADSS GNGSTNGGKAQKPRRQRTHFTSHQLTELENWFARNRYPDMACREEIAVWISLTEPRVR VWFKNRRAKWRKRERNYVIENGQATSKPSTMTPGIVPTQSLDPLGSLQNTFPQNLLQS SSQLDDSAVTASPFYGYGGTWQPNPYYSRSNQFNWQIKPQFQTLPMPTTTSPSRFTTA VSTGLTPLPTAQAAFSASSSNDKLKLMDGLSNSLTSSLGQTYQPCQYTGPL" assembly_gap 95827..96198 /estimated_length=372 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(103704..103887,104109..104262,104318..104495, 104541..104677,104725..104874,104929..105187, 105652..105846) /gene="CBG01819" /locus_tag="CBG_01819" /standard_name="CBG01819" /product="Protein CBG01819" /note="Predicted" /db_xref="GOA:A8WQR0" /db_xref="InterPro:IPR032675" /db_xref="UniProtKB/TrEMBL:A8WQR0" /protein_id="CAP22818.1" /translation="MDQAWLEIIDRLCIEDAVRIRRTSSKMNSLVSKSLKSKKNLDIE LDCPAVIQNPTAMASVIAQCSYNLQTLDLKIRPANSKYAVVSSDVEIRQRIMQAINEN AKKLKRFSIDRCRISAGAIGSFGDLPESIEEISITNSMIECTEWDVATIIRKSFETLF KKCTKLKYFEISGRSLNASHFHVDPSILQYISNTIEHLAIAVGNSLRIDNLTFLKNKK LKTLILQRSFISPCDLERIVAMSDSITHLDLSYSPNLLDCRKISKLKNLKHLSLINNR DGFRDDALSLIIQECPKIEELLLDNCESLTIKSMLFLGGLRNLKKLSLSGVVNVNDAV CQQITMCSKLQFLDINYCLKIEIHGIQCLLSCLTSLVHLEVLGIRAYSHQLLTQLAYY PKSIVSDSVQSFSFVIPPIPVPSVKS" CDS complement(join(106036..106146,106192..106457, 106509..106664,106709..106819,106864..106965, 108182..108209)) /gene="CBG01818" /locus_tag="CBG_01818" /standard_name="CBG01818" /product="Protein CBG01818" /note="contains similarity to Pfam domain PF01666 DX module contains similarity to Interpro domain IPR002593 (Domain of unknown function DX)" /note="Predicted" /db_xref="GOA:A8WQR1" /db_xref="InterPro:IPR002593" /db_xref="UniProtKB/TrEMBL:A8WQR1" /protein_id="CAP22819.2" /translation="MEPHVPFFEVSLNEKCENLSDCPNGSYDCLSVVGLNNSRCIRDV KEICTGGIPINPVTTCSRDTDCSPGWCDLETQNCCDVDQKSSELPMCPDRVTPLYAQQ KCRDVEKDMVYSGTSEQKGGLCYKGYSCPPKIKRKSDEFYGVEIFETNISCSTEQSVS GPYSFMFCNNRTGHLWFMGQYNVNGDEVTRHWTHCQFNKDCGKGHVCVKEDLARFRCY DDPTIKVNYNWIVIRLLAMFFVPVFFLIGIIILNVKYLD" CDS join(113137..113207,114291..114435) /gene="CBG01817" /locus_tag="CBG_01817" /standard_name="CBG01817" /product="Protein CBG01817" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WQR2" /protein_id="CAP22820.1" /translation="MSARWFAFVALLAVLLSAHTSDAMPRPGPMSLSNTRNCFFSPMG CVFVPKMSRIRKLSADFRNEIPPPDYI" CDS complement(join(114979..115193,116126..116263, 116309..116410,116457..116583,116739..116833, 116879..116981,117032..117128,117180..117262, 117311..117427)) /gene="CBG01816" /locus_tag="CBG_01816" /standard_name="CBG01816" /product="Protein CBG01816" /note="contains similarity to Pfam domains PF11938 (TLR4 regulator and MIR-interacting MSAP) (2), PF07645 (Calcium-binding EGF domain) contains similarity to Interpro domains IPR021852 (Protein of unknown function DUF3456), IPR018097 (EGF-like calcium-binding, conserved site), IPR000152 (EGF-type aspartate/asparagine hydroxylation site), IPR006210 (Epidermal growth factor-like), IPR002049 (EGF-like, laminin), IPR001881 (EGF-like calcium-binding), IPR013032 (EGF-like region, conserved site)" /note="Predicted" /db_xref="GOA:A8WQR3" /db_xref="InterPro:IPR000152" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR002049" /db_xref="InterPro:IPR009030" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR018097" /db_xref="InterPro:IPR021852" /db_xref="UniProtKB/TrEMBL:A8WQR3" /protein_id="CAP22821.1" /translation="MSRILLLVAVSIVMSSQKEVVIKNEKCRTCNFLVSTFDEGLKKT ARHHFAGGDTAWEEKNLGKYKTSETRLIEVLEGVCKKSSLPNIDKFTGISELEFKCAS QLEKHEETIEEYYYNQQQNNMSIWLCVEQLKLCCPGGHFGKNCEECPGLKEGADACFG KGACHGDGSRDGSGKCKCEAGYTGNLCRHCDNEYFEESKTEKGVVCKQCHEGCLGICS SEGSKGCSKCKNGWAMIEGEGCQDVNECSNHSACTKDHEVCVNTIGSYQCDCEEGYKK DDEGKCQLDVEAHPDRPFMPIAQQLKIISFSSLIIIITFVVWHGSPVLYVLTGIAIVA LILVDLYVNPDTIPDEAKRFLGLY" CDS join(120476..120590,121084..121295,121345..121436, 121482..121674,121788..122331,122744..123096) /gene="Cbr-nas-14" /locus_tag="CBG_01815" /standard_name="CBG01815" /product="Protein CBR-NAS-14" /note="C. briggsae CBR-NAS-14 protein; contains similarity to Pfam domains PF01549 (ShK domain-like) , PF01400 (Astacin (Peptidase family M12A)) contains similarity to Interpro domains IPR001506 (Peptidase M12A, astacin), IPR006026 (Peptidase, metallopeptidase), IPR003582 (Metridin-like ShK toxin)" /note="Predicted" /db_xref="GOA:A8WQR4" /db_xref="InterPro:IPR001506" /db_xref="InterPro:IPR003582" /db_xref="InterPro:IPR006026" /db_xref="InterPro:IPR024079" /db_xref="InterPro:IPR034035" /db_xref="UniProtKB/TrEMBL:A8WQR4" /protein_id="CAP22822.1" /translation="MRLIHSSLLFFACFGSALSVGVLPIPNEHASNIKAKFDDYAEHY LLPEDFHNAETAPVKKPTDAEIESMQNSLLFEGDIMGVPEIEKTDILKRLRDDPLIDD DEIFTKPFHSALNLVTYPDKLWPEGQVPYMLEEGMTNDQRTAIAQAFDEYKTKTCVRF VPKTDDDFDYIYVKRNVAFGCSSYVGRAGGNQTVSLEVDKCFSKGIIAHELMHALGFF HEHSRTDRDDFVDINEDNIRPGMMRNFEKYPRKIIDSLGMPYDYESVMHYHKLAFSRN GKPTIVPKDNEADVGQRYKLSEMDSKKVNKLYQCGEYSKTSYTTTTTTTTTTTTTTTT EEPTTTTVEEVEEKSKEKETSSTTTTTKKPTTTVATTTSTTPKPVERSRNKKCEDLNA HCGMWEQLGHCQHSVKYMAHYCRKACGLCEIEVTTTTAKPLPRNKEKENKSSTSSSIF SSTPRTTITTTTQPKEKCEDKNLFCSYWAKIGECNSESKFMKIFCKASCGKC" CDS complement(join(123409..123527,124368..124455, 124534..124663,124713..124864,124912..125391, 125442..125607,125649..125973,127978..128038)) /gene="Cbr-lev-1" /locus_tag="CBG_01814" /standard_name="CBG01814" /product="Protein CBR-LEV-1" /note="C. briggsae CBR-LEV-1 protein; contains similarity to Pfam domains PF02931 (Neurotransmitter-gated ion-channel ligand binding domain) , PF02932 (Neurotransmitter-gated ion-channel transmembrane region) contains similarity to Interpro domains IPR002394 (Nicotinic acetylcholine receptor), IPR018000 (Neurotransmitter-gated ion-channel, conserved site), IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding), IPR006029 (Neurotransmitter-gated ion-channel transmembrane domain)" /note="Predicted" /db_xref="GOA:A8WQR5" /db_xref="InterPro:IPR002394" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR006202" /db_xref="InterPro:IPR018000" /db_xref="InterPro:IPR036719" /db_xref="InterPro:IPR036734" /db_xref="UniProtKB/TrEMBL:A8WQR5" /protein_id="CAP22823.1" /translation="MPSGGGGGWWKTTILVVLLTGCILLPTNVSAEDIDAEDRLMVDL FRGYNSLVQPVRNRSELPMIVKIGMQLVLLINVDEKEQVMHTNVWLTMKWDDFQLKWD PRDYANITQIRVAPEKVWLPDIVLFNNADGNYEVSFMCNVLILHTGTVLWVPPAIYKS SCIIDVEFFPFDDQLCSLTFGSWTYNKDEIKLDFLTADRVDFSEYSTSSIWDMMDGPA VLTSDRSRIEFQIRIRRKTLFYTVVLILPTVLMAFLNVTVFYLPTASGEKMGLTMNVL LSIVVFLLLVSKILPPTSSSIPLVAKYLLLTFVLNIITIMVTTIICNIYFRSPITHRL PPWVRKVFLDWLPLLMCMQRPHRKNVIQKSHRKLLETGPSVEENPMRPGEHHPLCRHT HNPDSCRKVRIQSDELDDELSPEAQRAIDAIEFITENRRDEEITKQFRDDWKFIASVV DRFLLYGFFGATVGGTIGIVFSAPSVFETFDEHAQLAKLKQLYDMGLANDTVLGLF" CDS complement(join(129265..129333,129379..129618, 129768..129895,129994..130207,130250..130581, 130627..130889,130936..131081,131132..131266)) /gene="Cbr-ced-3" /locus_tag="CBG_01813" /standard_name="CBG01813" /product="Protein CBR-CED-3" /note="C. briggsae CBR-CED-3 protein; contains similarity to Pfam domains PF00619 (Caspase recruitment domain) , PF00656 (Caspase domain) contains similarity to Interpro domains IPR015917 (Peptidase C14, caspase precursor p45, core), IPR011600 (Peptidase C14, caspase catalytic), IPR016129 (Peptidase C14, ICE, catalytic subunit p20, active site), IPR002398 (Peptidase C14, caspase precursor p45), IPR001315 (Caspase Recruitment)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WQR6" /db_xref="InterPro:IPR001309" /db_xref="InterPro:IPR001315" /db_xref="InterPro:IPR002138" /db_xref="InterPro:IPR002398" /db_xref="InterPro:IPR011029" /db_xref="InterPro:IPR015917" /db_xref="InterPro:IPR016129" /db_xref="InterPro:IPR029030" /db_xref="InterPro:IPR033139" /db_xref="UniProtKB/TrEMBL:A8WQR6" /protein_id="CAP22824.2" /translation="MMRPDRRSLLERNILEFSSKLQADLILDVLIAKQVLNSDNGDVI NSCRTERDKRKEIVKAVQRRGDVAFDAFYDALRDTGHNDLADVLMPLSRPINCAVNPV PMECPMSPSSHRRSRALSPPRYASPTRVHRDSISSVSSFTSTYQDVYSRARSSSRSSR PLQSSDRHNYMSAATSFPSQPSSANSSFTGCASLGYSSSRNRSFSKTSAQSQYIFHEE DMNYVDAPTIHRVFDEKTMYRNFSSPRGLCLIINNEHFEQMPTRNGTKADKDNITNLF RCMGYTVICKDNLTGREMLSTIRSFGRNDMHGDSAILVILSHGEENVIIGVDDVSVNV HEIYDLLNAANAPRLANKPKLVFVQACRGERRDNGFPVLDSVDGVPSLIRRGWDNRDG PLFNFLGCVRPQVQQVWRKKPSQADMLIAYATTAQYVSWRNSARGSWFIQAVCEVFSL HAKDMDVVELLTEVNKKVACGFQTSQGSNILKQMPELTSRLLKKFYFWPEDRSRNSAV " CDS complement(join(133223..133373,133419..133525, 133579..133695,133754..133951)) /gene="CBG01812" /locus_tag="CBG_01812" /standard_name="CBG01812" /product="Protein CBG01812" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WQR7" /protein_id="CAP22825.2" /translation="MAFEAQPDCDAAEGAKGGKTGTKVWAGNSKYRIVEAYIYWTNSN GKILGMAACNVPASSNCVKNHASPKGAARQYLAIAVTLVKTSFEDQNIHYQYFDELFG LSKLSHPSIHDGKSQPLHNLNNFIYVKSASYNNKAGPLQFTAKSCRSDRAKSLISGHG YFITEFGLGGVWENLYYLPDRIGQYITTPN" CDS complement(join(135461..135586,135632..135706)) /gene="CBG26432" /locus_tag="CBG_26432" /standard_name="CBG26432" /product="Protein CBG26432" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEW9" /protein_id="CAR98449.1" /translation="MGDTATSRYKYYDSIELPAVYQDIEYYDDKPFIEVKKLENDPVF VDECVALDWEIKTPYRKIISKI" CDS complement(join(136670..136780,137606..137755, 137800..138020,138038..138256,138302..138628, 139395..139479,139532..139680,139741..139831, 139879..139994,140050..140293)) /gene="Cbr-cho-1" /locus_tag="CBG_01811" /standard_name="CBG01811" /product="Protein CBR-CHO-1" /note="C. briggsae CBR-CHO-1 protein; contains similarity to Pfam domain PF00474 Sodium:solute symporter family contains similarity to Interpro domain IPR001734 (Sodium/solute symporter)" /note="Predicted" /db_xref="GOA:A8WQR8" /db_xref="InterPro:IPR001734" /db_xref="InterPro:IPR038377" /db_xref="UniProtKB/TrEMBL:A8WQR8" /protein_id="CAP22826.2" /translation="MADFLGIVAIVFFYVLILVVGIWAGRKSKSTKELESEVGAQTEE VMLAGRNIGTLVGIFTMTATWVGGAYINGTAEALYNGGVLGCQAPVGYAISLVMGGLL FAKKMREEGYITMLDPFQHKYGQRIGGLMYLPALLGETFWTAAILSALGATLSVILGI DMNASVTLSACIAVFYTFTGGYYAVAYTDVVQLFCIFVGLWVCVPAAMVHDGAKDISR NAGDWIGEIGGFKETSLWIDCMLLLVFGGIPWQVYFQRVLSSKTASGAQTLSFVAGVG CILMAIPPALIGAIARNTDWRMTDYSPWNNGTKVESIPPDKRNMVVPLVFQYLTPRWV AFIGLGAVSAAVMSSADSSVLSAASMFAHNIWKLTIRPHASEKEVIIVMRVAIICVGI MATIMALTIQSIYGLWYLFILFPQLLCVVYMPRSNTYGSLAGYAVGLVLRLIGGEPLV SLPAFFHYPMYTDGTQYFPFRTTAMLSSMATIYFVSIQSEKLFKSGRLSPEWDVMGCV VNIPIDHVPLPSDVSFAVSSETLNIKTPNGTPAPAPHPNLQPSDENTLLHPYSDQHYY STSS" CDS join(146372..146521,146571..146685,146733..147226, 147328..147657) /gene="Cbr-col-121" /locus_tag="CBG_01810" /standard_name="CBG01810" /product="Protein CBR-COL-121" /note="C. briggsae CBR-COL-121 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain) , PF01391 (Collagen triple helix repeat (20 copies)) contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /note="Predicted" /db_xref="GOA:A8WQR9" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/TrEMBL:A8WQR9" /protein_id="CAP22827.1" /translation="MKVSIAHLAARLVCLLSALTAVFTVIICLHLSSKIQNTENEIMG KQSAFKAKSQVIWAELRQIEHPARFQRNAYGSNDEKKGILHQCSQCTRLHCPQGPIGE EGAPGNDGQPGTPGKPGSPGLEGTDVDLEPQDELPCSICPSGPQGPRGAQGERGLPGN AGRKGKSGKSGHPGQPGGIGASGAKGPTGPRGTNGVKGPPGETIIAGEGIKGPPGLAG SQGPKGPPGNPGRPSNIRGPPGKAGQQGGIGATGKFGKFGEQGGIGAPGEPGLPAAYC PSDCGVNTILSQFGSRAQHPESINGEDNGAPASNPEEYGRDEEESAEYPAPPAPQPTV QQQQETAAASSVPEESFEESSYRSFFGH" assembly_gap 148700..148749 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 149853..149862 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(150807..150883,150928..151150,151199..151363, 151411..151656,151703..151888) /gene="CBG01809" /locus_tag="CBG_01809" /standard_name="CBG01809" /product="Protein CBG01809" /note="Predicted" /db_xref="GOA:A8WQS0" /db_xref="UniProtKB/TrEMBL:A8WQS0" /protein_id="CAP22828.2" /translation="MNLILINSLFFVSFPFISSSAVEIISIENPLKNVRHCVQLQLEA GSSYRPYIDHLLEDGCKHPMRQNILERDFIEAVYNGERRIYERIRMVVNKGLIDWPTF KRKHLGISNEFSENVNGYSFVDDINPLCSKDEMLFVRLCFSKNPTRRFGRPDILETSD GSLYQFQIDNRYLSSSDCAFIVRFFSDCDDRSFSEIQIQGNFGRCKSKMTSIIFQLQS NVVTSLPILSSSSWTIFGTIGIILISIFLLSISIWCFNKRRRDRRKGKENQKDPNLNS NCPESEYHKNIPFIDDAIVFDI" CDS complement(join(151991..152194,152242..152997, 153121..153552)) /gene="CBG01808" /locus_tag="CBG_01808" /standard_name="CBG01808" /product="Protein CBG01808" /note="contains similarity to Pfam domain PF00400 WD domain, G-beta repeat contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR001680 (WD40 repeat)" /note="Predicted" /db_xref="GOA:A8WQS1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:A8WQS1" /protein_id="CAP22829.1" /translation="MEGVLMVSDLSWIQRGVAKEIPDKIKLNDEELKKLIEGALPEST DNDTDGDEEEDEDKKEGIRGRDVEMKDEESDFEKKYMQGYNEKEEGEEEGEDGMKGIA MYSTNKDDPYVTEQVDSDEEEEKEEIMVRKDDNMVAVAKIDKGDYTLECYVYNEADSD WYCHHDYILDAPPLCIEPVQHDPGNEETGKGNLIAVGTMNSEIHIWDLDIMNTATPFL TLGKKEKKSKGGRKKRDGSAQGHTDAVISLAWNKVTPHVLASGGADKTVVLWDLDEAK PAQIIPDRGGEVQTIRWHPNESTFLLLGTMKGHVQVVDCRETNGTASATWKFDGQIEK VIWNHFNPYTVFVSSDDGRLRHLDLRKPGECLWEGVAHDGPIGGLTLSAITRGLLVTV GEDEMMNVWKVEDTNGGIEKVHSEKLTIGELHCAQFNPDVAAVLSVGGTTADLIRVID LTKYEPVVKAFSE" CDS complement(join(153675..154316,154363..154404)) /gene="Cbr-tag-115" /locus_tag="CBG_01807" /standard_name="CBG01807" /product="Protein CBR-TAG-115" /note="C. briggsae CBR-TAG-115 protein ;" /note="Predicted" /db_xref="InterPro:IPR005062" /db_xref="UniProtKB/TrEMBL:A8WQS2" /protein_id="CAP22830.2" /translation="MQNLNSTQTITLMEKMLPFYLETDGVCKMATCFGYNSKLHDFQL EECFGRYKQSLRSIIFINVFRWYEELNASSDVTPHPLISSAFFFRQLHRKPTLLQDLY TFRGKLSEEVFSLTKRVISSYNSNNYYRFFKLFKDLDPLLQYSLSDSVSYIRQSAMRI IYTAFKTPVSKLPSHLISDWLGFPTDTIFFVDFLQLYNVIPDNQGNVHISAIKLIEIL ENDQISRQF" CDS complement(join(155220..155317,155366..155473, 155686..155940,156159..156195)) /gene="Cbr-rpl-12" /locus_tag="CBG_01806" /standard_name="CBG01806" /product="Protein CBR-RPL-12" /note="C. briggsae CBR-RPL-12 protein; contains similarity to Pfam domains PF00298 (Ribosomal protein L11, RNA binding domain) , PF03946 (Ribosomal protein L11, N-terminal domain) contains similarity to Interpro domains IPR020784 (Ribosomal protein L11, N-terminal), IPR020785 (Ribosomal protein L11, conserved site), IPR000911 (Ribosomal protein L11), IPR020783 (Ribosomal protein L11, C-terminal)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:P61865" /db_xref="InterPro:IPR000911" /db_xref="InterPro:IPR020783" /db_xref="InterPro:IPR020784" /db_xref="InterPro:IPR020785" /db_xref="InterPro:IPR036769" /db_xref="InterPro:IPR036796" /db_xref="UniProtKB/Swiss-Prot:P61865" /protein_id="CAP22831.1" /translation="MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGE DIAKATQDWKGLKVTCKLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNG DLTVDTIIKIARIMRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEI EIPAQ" CDS join(156546..156680,156728..156784,156833..156910, 156956..157128,157310..157697,157742..157990, 158665..158844) /gene="Cbr-lin-54" /locus_tag="CBG_01805" /standard_name="CBG01805" /product="Protein CBR-LIN-54" /note="C. briggsae CBR-LIN-54 protein; contains similarity to Pfam domain PF03638 Tesmin/TSO1-like CXC domain contains similarity to Interpro domain IPR005172 (Tesmin/TSO1-like, CXC)" /note="Predicted" /db_xref="GOA:A8WQS4" /db_xref="InterPro:IPR005172" /db_xref="InterPro:IPR028307" /db_xref="InterPro:IPR033467" /db_xref="UniProtKB/TrEMBL:A8WQS4" /protein_id="CAP22832.2" /translation="MNDGEGDLVFQESDDFYDETGIYENYEEEGAEFIEVDGRLVPHD PGQRNRPGPSSSLHHEQHSEVAVKEETLEHNPHRVYLPPPRAVQRKSGPSSGAYDPLR NVPVASPMYSRPGASRPAGGELTGEQRKAFIEMKEQVNQVRMKTKKKVYAPGQRKPCN CTKSQCLKLYCDCFANGEFCRDCNCKDCHNNIDYDSQRSKAIRQSLERNPNAFKPKIG IARGGTADIERLHQKGCHCKKSGCLKNYCECYEAKVPCTDRCKCKGCQNTETYRMTRF KNSGGPGAGANALMSLTNANSSTATPDSGPGSVMTDELGDDYDDMLLPQKPKPETDPR RFPWYYMTDEVVEAATLCMVAQAEEALNTNFSEKIQTEDDKIVNMEKLVLREFGRCLE QMITNTTEATIGLDASKNEALPSTSTS" CDS join(159072..159580,159725..159854,159900..160049, 160098..160220,160265..160633) /gene="CBG01804" /locus_tag="CBG_01804" /standard_name="CBG01804" /product="Protein CBG01804" /note="contains similarity to Pfam domains PF00383 (Cytidine and deoxycytidylate deaminase zinc-binding region) , PF04442 (Cytochrome c oxidase assembly protein CtaG/Cox11) contains similarity to Interpro domains IPR016192 (APOBEC/CMP deaminase, zinc-binding), IPR002125 (CMP/dCMP deaminase, zinc-binding), IPR007533 (Cytochrome c oxidase assembly protein CtaG/Cox11)" /note="Predicted" /db_xref="GOA:A8WQS5" /db_xref="InterPro:IPR002125" /db_xref="InterPro:IPR007533" /db_xref="InterPro:IPR016192" /db_xref="InterPro:IPR016193" /db_xref="InterPro:IPR023471" /db_xref="UniProtKB/TrEMBL:A8WQS5" /protein_id="CAP22833.1" /translation="MSEELQEDDRIFLEQAFTLAEEALNQDEVPVGCVFVVDGEEIGR GRNRVNETGDPTRHAEMVAVTEIWSKYGEESNNLLKKSVLYVSLEPCIMCSSAMYQLG IRKMVYGAENPRFGGVRSVGSAEKYREENNIEIVAGVWAERSVGMLKAFYEKQNPFAP PEKRKTKTPKLWSTTRPFCSVITWTTKSPLSTLAVLQRKTSAVNVLSIRQLNKKPSRS DKSADQKNYTYYVMSLVIVAIGCTFAAIPAYRIFCEQTSFGGLTQVAKDFDKIANMKK CEDRLIRVQFNSDVPSSMRWEFKPQQHEIFVHPGETALAFYTARNPTDKPIIGISSYN LTPFQAAYYFNKIQCFCFEEQILNPGEQVDLPVFFYIDPDYVNDPALEYLDSILLSYT FFEAKSGLKLPDPFDPKNRPSIAPSPDKVPEKSN" CDS join(160862..161024,161073..161746,161794..161898) /gene="CBG01803" /locus_tag="CBG_01803" /standard_name="CBG01803" /product="Protein CBG01803" /note="contains similarity to Pfam domain PF10228 Uncharacterised conserved protein (DUF2228) contains similarity to Interpro domain IPR019361 (Protein of unknown function DUF2228, C2H2, APLF-like)" /note="Predicted" /db_xref="GOA:A8WQS6" /db_xref="InterPro:IPR019361" /db_xref="UniProtKB/TrEMBL:A8WQS6" /protein_id="CAP22834.1" /translation="MVKRQPKKRKHEQCKENVSPQKKRMNREEVKLVEKDWMPAAAVE FFKSEKFESLEKIMKLADKNMSFIGPFRVLREGVEVNGVELIMTDRDETDLPEMQTFL KCSHGKFSFWRDTPSEKNPVIVFSDIQGIPVVTVVGNTVEHAIYGFCNKISKLQDNSK EVKSAIAEILGLLGAQKMEKEANQVMKKRKKETITGVLGPGLLVGDFPNTNKSRYRVV SKESNIENLLRCLSNTGKQHQDAVIGEIDELMNNVMMYNDEGFYGNGLELGHVLFLSN QSSISNQVLLVLTTAYNLYGRTDFVNILELSMELRDH" CDS complement(join(162115..162468,162523..162585)) /gene="Cbr-ttr-51" /locus_tag="CBG_01802" /standard_name="CBG01802" /product="Protein CBR-TTR-51" /note="C. briggsae CBR-TTR-51 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)" /note="Predicted" /db_xref="GOA:A8WQS7" /db_xref="InterPro:IPR001534" /db_xref="InterPro:IPR038479" /db_xref="UniProtKB/TrEMBL:A8WQS7" /protein_id="CAP22835.1" /translation="MKTTFLLLCAIFGCAVAMRQQAVAVSGKLMCGSKPASGVKVKLW DEDDGPDPDDVLDESFTNTDGTFRLEGSERELTNIDPVFKVYHDCDDGILPGQRKVKF RIPNSYISAGGRASKTFDIGILNLETIFPKEERDLL" CDS join(164098..164379,164426..164566) /gene="Cbr-ttr-45" /locus_tag="CBG_01801" /standard_name="CBG01801" /product="Protein CBR-TTR-45" /note="C. briggsae CBR-TTR-45 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)" /note="Predicted" /db_xref="GOA:A8WQS8" /db_xref="InterPro:IPR001534" /db_xref="InterPro:IPR038479" /db_xref="UniProtKB/TrEMBL:A8WQS8" /protein_id="CAP22836.1" /translation="MKTFILLVILIGLVAAMRDQSIAVKGKLVCGPKPASQVRVKLWE EDSGPDPDDLLEQGYTDGNGEFNLKGGTAELTDIDPVFKVYHACDDSKLKPGLRKIRF KLPKSYITSGKIPKKTFDIGTLNLETIFAEEEREILPK" CDS join(167154..167290,167336..167595,167643..167752, 168423..168491,168542..168608,168656..168830, 168876..168972) /gene="Cbr-bus-12" /locus_tag="CBG_01800" /standard_name="CBG01800" /product="Protein CBR-BUS-12" /note="C. briggsae CBR-BUS-12 protein; contains similarity to Interpro domain IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8WQS9" /db_xref="UniProtKB/TrEMBL:A8WQS9" /protein_id="CAP22837.2" /translation="MITFVIATVFCSLMAKIMVTRYFFDYPVVILMMQSAATLFFIEV ARVLGILKVAPYCFEKGRHIVIPSILYTISQWITVASFEGIAMPNFDSVKRFTPILIL IGLAARSRQQKVDQNRTFIIIGLSIASAFAVNLDFSVDRYSLMYGMVGAVLQATALIL FEEHLQTYNYTEVLYMHSFNSLVFYLLADMVRDELRDAFMYMITSAHPLFIIVFAISM LSGVLFHFTAFSCLEKNGSLNMQIVSNIRAVLETFFAYYLSIYLFYDVYPGVLNWAFL AITLVAARALITRDTEPEIVKGPWMTKA" CDS complement(join(172198..172646,172692..173053, 173101..173381,173436..174199,174337..174354, 174437..175095,175147..175440,175488..175678, 175725..175954,176058..176181)) /gene="Cbr-unc-26" /locus_tag="CBG_01799" /standard_name="CBG01799" /product="Protein CBR-UNC-26" /note="C. briggsae CBR-UNC-26 protein; contains similarity to Pfam domains PF03372 (Endonuclease/Exonuclease/phosphatase family) , PF02383 (SacI homology domain) , PF08952 (Domain of unknown function (DUF1866)) contains similarity to Interpro domains IPR002013 (Synaptojanin, N-terminal), IPR000300 (Inositol polyphosphate-related phosphatase), IPR005135 (Endonuclease/exonuclease/phosphatase), IPR015047 (Domain of unknown function DUF1866)" /note="Predicted" /db_xref="GOA:A8WQT0" /db_xref="InterPro:IPR000300" /db_xref="InterPro:IPR002013" /db_xref="InterPro:IPR005135" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR015047" /db_xref="InterPro:IPR036691" /db_xref="UniProtKB/TrEMBL:A8WQT0" /protein_id="CAP22838.1" /translation="MSVRGIRIWRRNDARFQPSILVEKNGLDGSLLFQGGAVATLDSD STEVERRSYQKIVDAYGLLGVLAITKDESVLVAVTGVLSVGQLYGADILKITNVEFIS LRTFGSVENVDSRIVDLQRLLSSQMFYFSSLQSYDLTRSAQHRDSHDGSDARFFWNRS LHFSFQRYGIDTDNWLLKCMAGSVLVRVVYVGANTGRVALISRLSCERVGTRFNVRGA NYLGNVANFVETEQLLLFDDKECSLLQIRGSIPLFWEQPGVNVGSHKVKLRAFETSLP AYHRHMSQLQHRYGEFAIVNLLGRKEGERVLSDAFKTQHKNSHFAPIVDFIDFDYHAQ MKISKEAIVQLKKKMTPHMSQHGFYYSMDHKLVKRQTGVFRTNCLDCLDRTNAVQTAV GLQMSHDQVAFLNLNAGKVNVEQRVEEILKDLWQKNGDQCSTIYAGTGALDGKSKLKD ASRSLARTIQNNLMDGAKQESFDLFLTGAAYDPRLFDRACNILPPSLIQESYYYHEYA DAVSQLVERSPEIAEPQHIKIFVGTWNVNGGKNIHNVAFRNESSLSHWIFSNSMTRLV SVEEEQLADIVAIGVEELVDLNASNMVKASTTNQRMWCESIRKTLAEKAPFVLIGSEQ LVGVCLFLFARPKISPYLKDFAVSSVKTGMGGATGNKGSVAFRIVVFSTSICFICSHF AAGQNEVKDRNEDFATTLKKIRFPLGREIDSHDVIFWFGDFNYRISLSGEEVKTAVRN GDFSKLVEHDQLTNEKIKGQTFIGFNEGQLTFAPTYKYDTFSDDYDTSEKCRAPAWTD RVLWKDQRKKGKTTLLSYDRSELKTSDHRPVGAVFKVETYKVDGKKCIELIEDVVESM GPPDGTIVVNIVGKPRFPPQMFPPIHEKLKELGAMVQLSKFDNGDLWIVLNSGEMALA ALSMDGLKLGSDQLQVKLKSPDWAYALKPHLSDFDLESFEVSPEEETLINGADGAVFE FADEDEDSISVMSLTLTGSAPDRPRPPSARSEAINMANLEWPSERQDVLSTSMPTRAS SASLANSSWYEHVPPLAPPTTHPTQQSNNNKSPPQQSCLFNPFTQSVPSPAAPPPPTI PTRGASVGPGPPAVPLRKAPPPPPRPVIPPRPKNM" CDS complement(join(176794..176844,176891..177076, 177510..177571,177621..178260,178293..178439, 178491..178777,178829..179027,179078..179642, 179690..179736)) /gene="Cbr-cpsf-3" /locus_tag="CBG_01798" /standard_name="CBG01798" /product="Protein CBR-CPSF-3" /note="C. briggsae CBR-CPSF-3 protein; contains similarity to Pfam domains PF12706 (Beta-lactamase superfamily domain) , PF00753 (Metallo-beta-lactamase superfamily) , PF07521 (RNA-metabolising metallo-beta-lactamase) , PF10996 (Beta-Casp domain) , PF11718 (Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term) contains similarity to Interpro domains IPR011108 (RNA-metabolising metallo-beta-lactamase), IPR001279 (Beta-lactamase-like), IPR022712 (Beta-Casp domain), IPR021718 (Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term)" /note="Predicted" /db_xref="GOA:A8WQT1" /db_xref="InterPro:IPR001279" /db_xref="InterPro:IPR011108" /db_xref="InterPro:IPR021718" /db_xref="InterPro:IPR022712" /db_xref="InterPro:IPR036866" /db_xref="UniProtKB/TrEMBL:A8WQT1" /protein_id="CAP22839.2" /translation="MEESSDNSDALSFTPLGSGQEVGRSCHLLEYKGKRVMLDCGVHP GLHGVDALPFVDFVEIENIDLLLITHFHLDHCGALPWLLQKTAFRGKCFMTHATKAIY RMLLGDYVRISKYGGADRNQLYTEDDLEKSMAKIETIDFREQKEVNGIRFWPYVAGHV LGACQFMIEIAGVRVLYTGDFSCLEDRHLCAAEIPPVSPQVLITESTYGTQTHEDRSV REKRFTQMVHDIVTRGGRCLIPAFAIGPAQELMLILDEYWEAHQELHDIPVYYASSLA KKCMSVYQTFVNGMNSRIQKQIAIKNPFIFKHVSTLRGMDQFEDAGPCVVLATPGMLQ SGFSRELFENWCSDSKNGCIIAGYCVEGTLAKHILTEPEEIVSLSGEKLPMRMQVGYV SFSAHTDFNQTSNFVKTLKPPHLPSQSRNRTIVPRHKYSNRGLFERMLGRYHNLFQVH NPRNTERLELQFRGEKTAKVIGKLAERMPENNKIISGVLVKNNFSYSLMAKDELGSYT SLRTSSLEQKMSVHYSNSLRLLIFNLNQLNDDATLTQNVKVKEMLKKGSVTHVISVFG VSLCLVSIAINCLFFQGKVIVSYYGNDSVAVVRWESNPVSDMYSDSVMAAILHAQSNP VPDKYLPSSSSFPPLTTALEGMVKHICGDEVSLVSSERGLLACFEEDGRRLPIEGNPD GPPTMGGDDPMDDPTTSHLLQGLTEKFKQIVTTNNEFDHLDDMEY" CDS complement(join(180019..180132,180181..180801, 180840..180947,180996..181150,181194..181600, 181652..181712,181765..182028,182076..182151, 182195..182224)) /gene="CBG01797" /locus_tag="CBG_01797" /standard_name="CBG01797" /product="Protein CBG01797" /note="contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR007087 (Zinc finger, C2H2)" /note="Predicted" /db_xref="GOA:A8WQT2" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR036236" /db_xref="UniProtKB/TrEMBL:A8WQT2" /protein_id="CAP22840.2" /translation="MSNCLMQLNQCIFPNCSQHFANQYDLTAHIEYTHIPVIEEDVKR KKIYAANSDQPMPPPAMNLPLSYYSRVFRTAYRPNPIKPEPLKLSFNHYKKKTIPKER SHSNPNATRYYRDMMARQGRHISIEEAEKRLCDIDFEECGADNPEVRWQCAIVDCNKR YKSMFALRVHMKICHNVVVSEEAKSLTSYPSEDVKPNLAALQQAMQQSSQMNPDRTMS SGTPTSTSTSNTPVVQGSPHPGGPSFGNPATNTTSFKCSYCSKRYKTSSGLSNHMMSS HQKISEAQDVPSQLVVEQLISQVRMQRNQEGSSSGGQSPQKHVSSPSSHFQSVANGSS HARNFSVTTTQQPIRFSQPGFPLNLDNQPSTGQKLEGIMFIESKIYNLQQKQIQEMKK MQELQASQALASSQQQHSQQGQQGQHFPSHAGQTGQNSGQSSSNQHPQMGQFQQQPQQ QSQLQHQHQQQQQHNQQQQQHQQHQQQQQQQYHQVPSQHHQQQSPYPQHVNQMAQHSP HAYQQHQQSPQLSQYSQASQSPQQQHANGSAPPPQRSPIPLSQPLPPLSSMTQQQRMP VQQMPSSNSGPMQFSSPDSQGYHNMMPSPLNGQLTPSQQPPPYNP" CDS complement(join(183628..183827,183875..183916, 183966..184020,184415..184606,184692..184943, 184987..185148,185192..185296,185340..185680, 185730..185918,185963..186119)) /gene="CBG01796" /locus_tag="CBG_01796" /standard_name="CBG01796" /product="Protein CBG01796" /note="Predicted" /db_xref="GOA:A8WQT3" /db_xref="InterPro:IPR015915" /db_xref="UniProtKB/TrEMBL:A8WQT3" /protein_id="CAP22841.2" /translation="MINIIGWAPDSHEVVFSLFQLSYISQFQPSPETSFLNQFISPFG TIESGDKNYPRVRSGHRCFTDNDYLYLIGGYTHQIRRGSIFKEIWAMSLATFEWRRYE VIGELPDTLASFAIIQVFPYSKTFILFGGSGTAFGTSSSNRFYFVGVDNNNCCVESYE LKVGGDIPLPKYGHAMCAGEVRGKYYIIGGTEGTSFDFDVHALTMRANPEATTENEKY TWHCELITTNQGFPGRYRLEATYDEKNHCLLFFGGGSNEEVHGFEKIIKLDLKTKISS AVSTIPDSRNGYPQARRCHTIARRSTKVIMTGGIFHRENGLDVLVHSDVWIFEMTDYS WEKYEHSLPRAVYFHDAAITEEGCMMVFGGAHELTPTAPRNNKLYFAWFGIPRLQTFA LEALRKKYPQMFSGLYSGNLQPSGVLDVFNTFCKPGKISEEERNIVQRGRIPFHEHED RSRFFLNGNSEDYAVRIFLQHQVADPEPLQRRRGQRQQGRHEQILQNNGDIRGPLRRM FDQFLRGVGAVDENNGEGEAGEEREVNAQLRRENIDNIINEINEIIAERVDREDPQ" CDS join(186367..186463,186514..186619,186664..186807, 186855..186915,187075..187227,187275..187412, 187456..187564,187607..188400) /gene="Cbr-micu-1" /locus_tag="CBG_01795" /standard_name="CBG01795" /product="Protein CBR-MICU-1" /note="C. briggsae CBR-MICU-1 protein; contains similarity to Interpro domain IPR018247 (EF-Hand 1, calcium-binding site)" /note="Predicted" /db_xref="GOA:A8WQT4" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR018247" /db_xref="InterPro:IPR039800" /db_xref="UniProtKB/Swiss-Prot:A8WQT4" /protein_id="CAP22842.2" /translation="MLRHNFRSSIFIRIVANSWSITRSVSSAPIKAESRKQQDSLKNI DSGEAYTALGNIRQKKDVFHYTDRASGTGYSHYSNSVYQHRPYIWPPLRKMYNWNYAF VIAGMVILMSDFEWIKEQIKGASTPFRPEASQKEESTDSGTEIEVKEKPKKKKLGFRE RRIIEYEDRLRLYSTPDKIFRYFATLKIIDPNDESGRIFEVFMTPEDFLRSFTPGVMQ PRRWGLDSFKAYNPEKHKRHKFSDPNSIFYKLGENGLINFSDYLFLMTLLSTSHADFA LAFKIFDVDGNGALDKEEFTKVQQLIMSQTTVGQRHRDHVTPNSSFRVETNSALETYF FGKDGKGSLSSEKFIEFQERLQHDILKMEFERRDAMENSDGLITEESFAQLLLLHAQI AEKKQKHMLKRVKRRFKGDQSKGVSFDETKAFFEFLYHIDDVDIALHFHKMAGMSIDA KLLKRVAVKVTGIPLSDHVVDVVITLFDDNLDGKLSHEEMVAVMRRRMRRGLERPRDT GLFRLFDAVLECGKRAYHASPLPFY" CDS 188537..188974 /gene="CBG01794" /locus_tag="CBG_01794" /standard_name="CBG01794" /product="Protein CBG01794" /note="Predicted" /db_xref="GOA:A8WQT5" /db_xref="UniProtKB/TrEMBL:A8WQT5" /protein_id="CAP22843.1" /translation="MSLALRKTLGVARFSMRTASFQAVPTNAGKTPPTLEQFDPLNPG EWQLGAGGKILPRLPEGTKVGNLVMGKYGLYDPVLKKRVDTYANALLEGKKSEEAGPF DVAVSKIAKVLSYICFVIAIYNLISLVVGKPLPPLSHVKAPGS" CDS join(189386..189647,189696..190486,190541..190655, 190701..190879) /gene="Cbr-csn-6" /locus_tag="CBG_01793" /standard_name="CBG01793" /product="Protein CBR-CSN-6" /note="C. briggsae CBR-CSN-6 protein; contains similarity to Pfam domain PF01398 JAB1/Mov34/MPN/PAD-1 ubiquitin protease contains similarity to Interpro domain IPR000555 (Mov34/MPN/PAD-1)" /note="Predicted" /db_xref="GOA:A8WQT6" /db_xref="InterPro:IPR000555" /db_xref="InterPro:IPR024969" /db_xref="InterPro:IPR037518" /db_xref="UniProtKB/TrEMBL:A8WQT6" /protein_id="CAP22844.2" /translation="MILSSPSGSCSTKVLLHPLVIMQMSEHYSRTKVQQGANVKKVYG AVLGKQNGRQVEAVNSFVLKAETEEMTNQATFSAEHLLLRAEQYLEVFPELQVIGLYC AGEDDELTNEEKIILSKLTTSVRNSEKAGQIDATLFLKLNSLTAGTTRKLPLFAFEAD VADAEKHRQIEWFLVSEDSERVGVNHIAKLSTKHGKDETSVGQKHREAQVAAMSMLQN RVDVSFLIVHIIAKCVFQLIVAYLEKIQDGTLQPNFDILKEANLLAQKLKTIDRYSFE FSEHFEKEEKTMTVFSLMPKLTSLLGNMQSMWTKLAAQRADLLSDDGFHGKSSSSRWA HPLKFKSQYIGRPIQMEDDEYFDEEDLENEMSGPRRKIHAADSPAGFRRRRPPPRAAM NSSRSNTSVLAPTGTDEMELSGHEENAGPSSRNYIPDAPRPSASGNHESEDSSQVS" CDS join(191069..191266,191296..191400,191445..191767, 191815..192076,192120..192272,192305..192475, 192517..192714,192764..193471) /gene="CBG01792" /locus_tag="CBG_01792" /standard_name="CBG01792" /product="Protein CBG01792" /note="contains similarity to Pfam domain PF01432 Peptidase family M3 contains similarity to Interpro domain IPR001567 (Peptidase M3A/M3B)" /note="Predicted" /db_xref="GOA:A8WQT7" /db_xref="InterPro:IPR001567" /db_xref="InterPro:IPR024077" /db_xref="InterPro:IPR033851" /db_xref="UniProtKB/TrEMBL:A8WQT7" /protein_id="CAP22845.2" /translation="MLRSVILRHSRAFTRQSSLFSEWRRAFKSEKIEEGKGLFGYKKL SSPASFHELPVEVKSSTDSLIKTEFWFQELLDPLDSSRTSIEIVDDISNEICKAADLA ECVRQLHSDSKYREAAENVSRDFCELVESLNTNTALYQKLKSSEVTEASRLDDVDRRT LALLLDDFEQSGVHLEDAQKNEFVQLSSDIFEFGARFQENCDRVVSIGKFDQAKYGLS SQIYSPVSNSLDRSKRKMVYNAFYRHDDQQENYLRKLISSRHELALLTGFESFAHRAQ RNSLLENYENAQNFLWGVIEKCRGSFEKELAVLIDVSEQCSQQNRNGNHQASSIDDHD LGFLMHLYRVSIFESAYDIAKISQESSPFFTFTSVWKGFSALTHRLYGVRLVEKPLSP GEMWNVSGVMKLKAVDEQNNELGVVYVDVSIRPDKAVGDCHYTVRCSKHLSNGTWQMP ILVLSLGLVDSRSPQWRDTRISFHSAETMFHELGHAMHSILGRTKYQHVAGTRCPQDF SEIPSNLMEYFFSDLKVMTDIIKRTDRPNDQLPIESAATLLASRHSFTAIETVQQAAY GLYDLEVHGPIAAPQIAYGHMTTTELFNDIMNKAMPNVQRELGSAFQHRFHHTVQYGA KYYSYLVARASACLIWQQRFMDDPFSRKWGDCWAEVQSHGGGHHPSVLLEKILGFRPT EKELTIALSKESQHLANLDAVTV" CDS join(195305..195787,195843..196214,196261..196605) /gene="Cbr-fat-1" /locus_tag="CBG_01791" /standard_name="CBG01791" /product="Protein CBR-FAT-1" /note="C. briggsae CBR-FAT-1 protein; contains similarity to Pfam domain PF00487 Fatty acid desaturase contains similarity to Interpro domain IPR005804 (Fatty acid desaturase, type 1)" /note="Predicted" /db_xref="GOA:A8WQT8" /db_xref="InterPro:IPR005804" /db_xref="UniProtKB/TrEMBL:A8WQT8" /protein_id="CAP22846.1" /translation="MVAHSSDGLSATAPVTGGDVLVDARVSIEEKPPRSLDSTQQSTE EERVQLPTVDAFRRAIPPHCFERDLTRSLRYLVQDFAALAFLYFALPVFEYFGLVGYL AWNVLMGVFGFALFVVGHDCLHGSFSDNQVLNDIIGHIAFSPLFSPYFPWQKSHKLHH AFTNHIDKDHGHVWIQDKDYEKMPTWKKLFNPMPFSGWLKWFPVYTLFGFCDGSHFWP YSSLFVRDSERVQCVISATCCVACAYVALAIAGSYSNWFWYYWVPLSFFGCMLVIVTY LQHADEVAEVYEADEWSFVRGQTQTIDRFYGFGLDETMHHITDGHVAHHFFNKIPHYH LIEATEGVKKVLEPLFETQYGYKYQVNYDFFVRFLWFNIKLDYLVHKTKGILQFRTTL EEKAKAK" CDS join(198097..198747,198803..198928,199053..199406) /gene="Cbr-fat-2" /locus_tag="CBG_01790" /standard_name="CBG01790" /product="Protein CBR-FAT-2" /note="C. briggsae CBR-FAT-2 protein; contains similarity to Pfam domains PF00487 (Fatty acid desaturase) , PF11960 (Domain of unknown function (DUF3474)) contains similarity to Interpro domains IPR021863 (Protein of unknown function DUF3474), IPR005804 (Fatty acid desaturase, type 1)" /note="Predicted" /db_xref="GOA:A8WQT9" /db_xref="InterPro:IPR005804" /db_xref="InterPro:IPR021863" /db_xref="UniProtKB/TrEMBL:A8WQT9" /protein_id="CAP22847.1" /translation="MTIATKVKTSKKDLETIKVPELPSVAALKAAIPEHCFVKDPLIS ISYLIKDYLLLAGLYFAVPYIEHYLGWIGLFAWYWAMGIVGSALFCVGHDCGHGSFSD YEWLNDLCGHLAHAPILAPFWPWQKSHRQHHQYTSHLEKDKGHPWVTEEDYNNRTAIE KYFAVIPISGWLRWNPIYTIVGLPDGSHFWPWSRLFETTEDRVKCVVSGVACAICAYI AFALSGYSVYTFVKYYYIPLLFQGLILVIITYLQHQNENIEVYEADEWGFVRGQTQTI DRHWGFGLDNIMHNITNGHVAHHFFFTKIPHYHLLEATPAIQKALEPLKNTQYGYKRE VNYDWFFKYLSYNVTLDYLTHKAKGVLQYRTGVEAAKAKKAH" CDS complement(join(200717..200761,200948..201321, 201371..201452,201501..201890,201941..202043, 202106..202262,202336..202378)) /gene="Cbr-pqn-74" /locus_tag="CBG_01789" /standard_name="CBG01789" /product="Protein CBR-PQN-74" /note="C. briggsae CBR-PQN-74 protein; contains similarity to Pfam domain PF01607 Chitin binding Peritrophin-A domain contains similarity to Interpro domain IPR002557 (Chitin binding domain)" /note="Predicted" /db_xref="GOA:A8WQU0" /db_xref="InterPro:IPR002557" /db_xref="InterPro:IPR036508" /db_xref="UniProtKB/TrEMBL:A8WQU0" /protein_id="CAP22848.1" /translation="MARLLLIIGCATLAAFASCESKSGEETPQYWRAILGDICQLPSF PRATGDPTRYVECVRQSSFAADRKDLGIWLLRECLPGYEFVASARRCKTVRSVNKQQE LCESANATEYNFCPTASAMQFLVEEIREAPRQCACPNGEQNCVCPSPEILEPISAAKK VRRSAQQQPLRFSQYPSCPCPQNQPACTCSTNNQQNEQILVSISCCQQDVATTQAPVQ MQPCQCTPTQIQQNCQTTTTQQQYCPQQSAPVVQPQPCPLVQGSGVQNAQYQGICSWM IDPLATDPQSRTHFLQCQPAPNNLFCGRWQRMPCAPGTVFDVSSQVCVWDTSSQPGTL PTPAPYVSTQAPQNAQCGCTGGVQIGSCNQNYQCPGQSVCQVGQNNGQQCMVCCYFRK KARRF" assembly_gap 209438..209779 /estimated_length=342 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(211545..211670,211712..211804,212013..212138, 212185..212287,212523..212941,213009..213248, 214047..214196,214243..214446) /gene="CBG01787" /locus_tag="CBG_01787" /standard_name="CBG01787" /product="Protein CBG01787" /note="contains similarity to Pfam domains PF00497 (Bacterial extracellular solute-binding proteins, family 3) , PF00060 (Ligand-gated ion channel) contains similarity to Interpro domains IPR000589 (Ribosomal protein S15), IPR001638 (Extracellular solute-binding protein, family 3), IPR001320 (Ionotropic glutamate receptor)" /note="Predicted" /db_xref="GOA:A8WQU1" /db_xref="InterPro:IPR001638" /db_xref="InterPro:IPR040128" /db_xref="UniProtKB/TrEMBL:A8WQU1" /protein_id="CAP22849.2" /translation="MSSRRQLRVVLARNPPDAFANCPIFPTLDVIVQCPFPGWTIEVL KMIGDSLKWDIIPVVTPTIVGGLDWGTLKENSTWSGVLGYLQNGTADAAALMYQKTDM RNEFFEFSYPVTNVQPVFVVRKKTENLGSVLWNAFKPFSMEVWLCLLASLILNLFVMI AISRVEFKLLFRERFRPFEMLWHVVQLQLDEKSDDMLFYTLGGNIVLFVFALLQSGIL IEVYKGMLLTALITSNGDNPFANADEMIKLIGEKKYHLTTNYMGNWYFDDLQHSDQAH FVKLRAATSSNPVCICCVGFRDTGKYIYPIQQDSLAMQMSKERCNYVYVSDGMPQVSS FFVFTKNFSGIEEFNRQIIMNQAFIQRTFNKYFNQGFKLGFIPKCEVTEEAQSDATKP LDIESIIGVFTIGAFGISASLIAFVVEIYHYWHMRIVARRARMRDPWNVRNLARIAQI HFTTSQQYSDIDVMRLVDALNASSSSQSSSDESSSI" assembly_gap 215302..216108 /estimated_length=807 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(219442..219581,219641..219738,219782..219925, 219970..220091,221692..221949) /gene="Cbr-srsx-25" /locus_tag="CBG_01786" /standard_name="CBG01786" /product="Protein CBR-SRSX-25" /note="C. briggsae CBR-SRSX-25 protein ;" /note="Predicted" /db_xref="GOA:A8WQU2" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="InterPro:IPR019424" /db_xref="UniProtKB/TrEMBL:A8WQU2" /protein_id="CAP22850.2" /translation="MILDMYTLSSIKCFLLSSYGLFALNMQSSLGLVIGLDRLYNVTF PTKYSKLPNSIYIALVIFCVLFSFFITLFGYQYATDSEKVPVCLPPTAYTGTSRNIWI GSNFIISILVIFVYGGAHIRCRILKAKHVHEQTVETVNRLLKSLTVVIAIYVCTWFLT ISSLVVSQVSKFSPEVTAEINRQLGWLVIINASLNFFVYFWRASEYRLNSKDLPDKEH RCRKSIIKLYGLSRAFKLEASVDTGARIMKTSVKI" CDS complement(join(222083..222223,222454..222588, 224199..224255)) /gene="CBG01785" /locus_tag="CBG_01785" /standard_name="CBG01785" /product="Protein CBG01785" /note="contains similarity to Pfam domain PF00428 60s Acidic ribosomal protein contains similarity to Interpro domain IPR001813 (Ribosomal protein 60S)" /note="Predicted" /db_xref="GOA:A8WQU3" /db_xref="InterPro:IPR027534" /db_xref="InterPro:IPR038716" /db_xref="UniProtKB/TrEMBL:A8WQU3" /protein_id="CAP22851.1" /translation="MRYISAYLLAVLGGNANPQTDDIKNILSAVGVDANAESVNLVVS GLKGKNIEELIAAGSAKLATISGGVGAASSAAPAAGGAAPAADSKPAKKEEPKEESDD DMGFGLFD" CDS complement(join(224828..225025,225073..225396, 225445..225495)) /gene="Cbr-agt-1" /locus_tag="CBG_01784" /standard_name="CBG01784" /product="Protein CBR-AGT-1" /note="C. briggsae CBR-AGT-1 protein; contains similarity to Pfam domain PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain contains similarity to Interpro domains IPR001497 (Methylated-DNA-[protein]-cysteine S-methyltransferase, active site), IPR014048 (Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding)" /note="Predicted" /db_xref="GOA:A8WQU4" /db_xref="InterPro:IPR001497" /db_xref="InterPro:IPR014048" /db_xref="InterPro:IPR036217" /db_xref="InterPro:IPR036388" /db_xref="UniProtKB/TrEMBL:A8WQU4" /protein_id="CAP22852.2" /translation="MQIRQCVYEVAQTNHGEVLIAECVSSRKAVAIYFLDNDFDLQME ELQETYPTVQFESGNPTQTALVNIIPASKTIYYSCQVVRAINDLDCSLEVKMVQKANT PFAAQVYNAVQKIPKGETRSYSDIAREIGNPSATRAVAGACARNNLAYIVPCHRVIGS SGNLSGYRWGIAKKRTLLQAEGAELRFSAM" CDS complement(join(225608..225751,225962..226096, 226175..226231)) /gene="Cbr-rla-2" /locus_tag="CBG_01783" /standard_name="CBG01783" /product="Protein CBR-RLA-2" /note="C. briggsae CBR-RLA-2 protein; contains similarity to Pfam domain PF00428 60s Acidic ribosomal protein contains similarity to Interpro domain IPR001813 (Ribosomal protein 60S)" /note="Predicted" /db_xref="GOA:A8WQU5" /db_xref="InterPro:IPR027534" /db_xref="InterPro:IPR038716" /db_xref="UniProtKB/TrEMBL:A8WQU5" /protein_id="CAP22853.1" /translation="MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDTDAETAKLVVS RLQGKTIEELIAEGSASLVSVSGGGAPAAASAAPAAGGAAPAAESKPAKKEEPKEESD DDMGFGLFD" CDS join(227000..227103,227155..227434) /gene="CBG01782" /locus_tag="CBG_01782" /standard_name="CBG01782" /product="Protein CBG01782" /note="contains similarity to Pfam domains PF01918 (Alba) , PF12328 (Rpp20 subunit of nuclear RNase MRP and P) contains similarity to Interpro domain IPR002775 (DNA/RNA-binding protein Alba-like)" /note="Predicted" /db_xref="GOA:A8WQU6" /db_xref="InterPro:IPR014612" /db_xref="InterPro:IPR036882" /db_xref="UniProtKB/TrEMBL:A8WQU6" /protein_id="CAP22854.2" /translation="MSTTPSKRYDEKINTVDRRPPVKPCEEPNHIYITRKTNVESQAK TAEEMLNNSFDEIYIHGMGASVNKALVFAMEVERKFGGSVKSDIQTSTVQCTDDIISL LDLDQTDTRHRSVSAVHVHLYRAAS" CDS join(227608..227716,227765..227880,227926..228002, 228048..228408,228768..228908,228961..229182, 229229..229301,229348..229619) /gene="CBG01781" /locus_tag="CBG_01781" /standard_name="CBG01781" /product="Protein CBG01781" /note="contains similarity to Pfam domain PF07992 Pyridine nucleotide-disulphide oxidoreductase contains similarity to Interpro domains IPR013027 (FAD-dependent pyridine nucleotide-disulphide oxidoreductase), IPR000103 (Pyridine nucleotide-disulphide oxidoreductase, class-II), IPR023753 (Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain)" /note="Predicted" /db_xref="GOA:A8WQU7" /db_xref="InterPro:IPR021163" /db_xref="InterPro:IPR023753" /db_xref="InterPro:IPR036188" /db_xref="UniProtKB/TrEMBL:A8WQU7" /protein_id="CAP22855.2" /translation="MFAKVLMRRIGNIQFTYKTRKLSSKPRLAIVGSGPAGMFACNGL LRKSNFLVDVFEYSPVPFGLVRYGVAPDHQEVKNVINTFDAMFEKNRERLRLYCNVKI GQDITFDELTRGYDAVLLAYGSYKARKLGVPGCASKNVISGSDFVGWYNGVPNAPTPD LSASNVVIVGNGNVALDCARVLSTASSGSLRISDIPDERLSVLEKTATKDIKILGRRG PENVSFTIKELREQFKIQEWDSKLEISETDLKNLIESLPKLERKKKRLTEVLVKNTGT TSGLRQCHFLFHRVPKEVVADSNGMVRELVVENTETSKTETFPCELLIYSIGYETLVL DGVPQNENKMIDMKDHCRVNINAECPAHVYATGWCAHGPRGVIVDTQQQSSFVADQIA SDFIHTRHSIAPGVDLVLNERKVPFISWDAWKMIDQQERDQGKLSGKIREKFTTFEKF LSKRLE" CDS join(229857..230056,230108..230309,230354..230533, 230584..230708,230758..230824) /gene="Cbr-mau-8" /locus_tag="CBG_01780" /standard_name="CBG01780" /product="Protein CBR-MAU-8" /note="C. briggsae CBR-MAU-8 protein; contains similarity to Pfam domain PF02114 Phosducin contains similarity to Interpro domain IPR024253 (Phosducin, thioredoxin-like domain)" /note="Predicted" /db_xref="InterPro:IPR001200" /db_xref="InterPro:IPR024253" /db_xref="InterPro:IPR036249" /db_xref="UniProtKB/TrEMBL:A8WQU8" /protein_id="CAP22856.1" /translation="MNLESRLLDGKPAGYCSSSEGEEDDFKVVNDEDEHQANVMRRMG PSSSTGAKGVLNEFKAFQEQTKLAYESRNQKLIEQARKGMMVGTKEEREKVQRNDEED EDFEMTLEGLKAKRLREMRKIAANRVIEMTDKNQYSDAVSGSSAYLLCVLIYEPDSDE CEYLTRILKILAADYPKTKFVRATSTLLGMSLAFKTSGVPCLQFYLNENLIGNFVKVS SILGNDYDCKKLLQLLRSNHIDLLSGGYATDSEIESDDD" CDS complement(join(231058..231414,231465..231689, 231735..231857)) /gene="CBG01779" /locus_tag="CBG_01779" /standard_name="CBG01779" /product="Protein CBG01779" /note="contains similarity to Pfam domain PF01956 Integral membrane protein DUF106 contains similarity to Interpro domains IPR008568 (Uncharacterised conserved protein UCP010045, transmembrane eukaryotic), IPR002809 (Protein of unknown function DUF106, transmembrane)" /note="Predicted" /db_xref="GOA:A8WQU9" /db_xref="InterPro:IPR002809" /db_xref="InterPro:IPR008568" /db_xref="UniProtKB/TrEMBL:A8WQU9" /protein_id="CAP22857.1" /translation="MTDLLLDPAIRTWVFLPIVVITFFIGILRHYVSLLLMNKKKVEL ENIADGQYLLRARLLRENGRFLPKTSFNARRQYLCAEETGYLSKAQQRPAKGPNPMDP SQMTEMLKGNMMNMIPMIVVGGWINWTFSGFVTTRVPFPLTLKFKAMLQRGVDLVSLD SAWVSSASWYFLCMFGLRSIYTLVLGSENAADQSKAMEDQMAMTGSAVNPQADPRAAF KGEWEALQMTQHQFAL" CDS complement(join(232015..232211,232257..232328, 232376..232576,232629..232720,232770..232840)) /gene="Cbr-rab-19" /locus_tag="CBG_01778" /standard_name="CBG01778" /product="Protein CBR-RAB-19" /note="C. briggsae CBR-RAB-19 protein; contains similarity to Pfam domains PF00071 (Ras family) , PF04670 (Gtr1/RagA G protein conserved region) , PF00025 (ADP-ribosylation factor family) , PF08477 (Miro-like protein) contains similarity to Interpro domains IPR002041 (Ran GTPase), IPR013684 (Mitochondrial Rho-like), IPR003578 (Small GTPase superfamily, Rho type), IPR005225 (Small GTP-binding protein domain), IPR001806 (Small GTPase superfamily), IPR003579 (Small GTPase superfamily, Rab type), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR006762 (Gtr1/RagA G protein), IPR020849 (Small GTPase superfamily, Ras type)" /note="Predicted" /db_xref="GOA:A8WQV0" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8WQV0" /protein_id="CAP22858.2" /translation="MDSDDGFDYLFKIVLVGDMGVGKTCVVQRFRSGNFVDRQGTTIG VDFTMKTLNVDGKRVKLQIWDTGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQ RWIDDVSKFAAPNVAKLLIGTKCDLEDQRAIETEEAELLQRANGMFEMLETSAKNDIN VDNAFLELATILKRQYDQGVVEQGASGTFQLGSGGTTSINSPWQRCCQYA" CDS join(234508..234596,234643..234845,234954..235177, 235224..235349) /gene="Cbr-mdt-9" /locus_tag="CBG_01777" /standard_name="CBG01777" /product="Protein CBR-MDT-9" /note="C. briggsae CBR-MDT-9 protein; contains similarity to Pfam domain PF04421 Mss4 protein contains similarity to Interpro domain IPR007515 (Mss4)" /note="Predicted" /db_xref="GOA:A8WQV1" /db_xref="InterPro:IPR007515" /db_xref="InterPro:IPR011057" /db_xref="InterPro:IPR011323" /db_xref="UniProtKB/TrEMBL:A8WQV1" /protein_id="CAP22859.2" /translation="MSSTSKEANKPSAESYLNKLYADLYHLVNSVEKGSGSELTVRLR NVESDIANFKEAIKTLPDISVGEGKQRGQISALYKQIEKKDELLESLAAFSLDARTNE DTLICKECKTVVILKNMTTEFLNEERDLPLPRQKKGIDHTQTEPVRGYFGVKDIFAFE NVGFTRSSEGKRYLVCGECEQGPVGFVDTLTEMNYVTPERLAVQQTTNSPVEN" CDS join(235526..235639,235909..236049) /gene="Cbr-lsm-3" /locus_tag="CBG_01776" /standard_name="CBG01776" /product="Protein CBR-LSM-3" /note="C. briggsae CBR-LSM-3 protein; contains similarity to Pfam domain PF01423 LSM domain contains similarity to Interpro domains IPR001163 (Like-Sm ribonucleoprotein (LSM) domain), IPR006649 (Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type)" /note="Predicted" /db_xref="GOA:A8WQV2" /db_xref="InterPro:IPR001163" /db_xref="InterPro:IPR010920" /db_xref="InterPro:IPR040002" /db_xref="UniProtKB/TrEMBL:A8WQV2" /protein_id="CAP22860.2" /translation="MASEKKEVTLSATVEEPLDLLRLSLDEKVYVKMRNDREVEETIT TREVDEDTFEEIYRQSKRVVPMLFVRGDSVILVSPPIRAS" CDS complement(join(236314..236547,236595..236895, 237218..237477)) /gene="CBG01775" /locus_tag="CBG_01775" /standard_name="CBG01775" /product="Protein CBG01775" /note="contains similarity to Pfam domains PF12710 (haloacid dehalogenase-like hydrolase) , PF00702 (haloacid dehalogenase-like hydrolase) contains similarity to Interpro domains IPR006383 (HAD-superfamily hydrolase, subfamily IB, PSPase-like), IPR004469 (Phosphoserine phosphatase SerB), IPR005834 (Haloacid dehalogenase-like hydrolase)" /note="Predicted" /db_xref="GOA:A8WQV3" /db_xref="InterPro:IPR023190" /db_xref="InterPro:IPR023214" /db_xref="InterPro:IPR036412" /db_xref="UniProtKB/TrEMBL:A8WQV3" /protein_id="CAP22861.2" /translation="MIRVAFPTSAAAIPRSISTAVSENIPKNQEEDVRKVWRNADAVC FDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRYRDALAARLQVMKPNNE QLEQFVNITKPKLTIGIRELVSRLHARGTHVYLVSGGFRRLILPVAELLGIEKSRIYA NEILFDKQGNYHGFDTSELTSDSGSKDVGKPAVIALLKKKFHYKTVVMVGDGATDAEA APPADAFIGFGGNVIREGVKARAKWYVTDFDVLRKDLEHDDSSDDE" assembly_gap 241449..241458 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(241962..242145,242465..242698, 242742..243676,243722..243949)) /gene="Cbr-puf-11" /locus_tag="CBG_01774" /standard_name="CBG01774" /product="Protein CBR-PUF-11" /note="C. briggsae CBR-PUF-11 protein; contains similarity to Pfam domain PF00806 Pumilio-family RNA binding repeat contains similarity to Interpro domain IPR001313 (Pumilio RNA-binding repeat)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WQV4" /db_xref="InterPro:IPR001313" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR033133" /db_xref="InterPro:IPR033712" /db_xref="UniProtKB/TrEMBL:A8WQV4" /protein_id="CAP22862.1" /translation="MSQQNELNTYMVPNKPINGRIYESPAPSQAHNESANATFGGCFN SYNSSWVPSKNNGQPFTPMFQSTPKQAGGSFKHSSWRNATPSSTPRRQNGDLGSVHVR LIDLELNNATTSSLNTSHNRSLRSTLPVWAIDENGGVSESVTLKDVLVNEALIEFATD KNGCRFLQEQYPEHSDGGIHDDIFRRMVEDRSMFLSMCRNMFGNFFVQRMVECSNNEE QEIVMEHLVTEMYTLCLDKSACRVIQLAVQKLEVHLASRLAAELRDSDLVRLSIDQNG NHVIQKIIKTLPVSAWDFVVKFFCNDENLIAVCQDKYGCRVVQSTIEKLSEDPHLECY SQRLHLLKNLMVGVTRNCGQLASNEFANYVVQHVVKCGGAMETFRDIIIEQCLLRNLL SMSQEKYASHVVEVAFLRAPHRLAFEMMEEIFEGYIPHPETNRDALDILLFHQYGNYV IQQMINICCNAILGRSDRHLEQKEIEQYTKWLERIKERVSRNSNRLERFSSGKKIIEA LHASSIGTLMSPSAGQYH" CDS join(244836..244928,244973..245373,245423..245519, 245566..245660,245709..245769,245815..246468, 246515..246601) /gene="Cbr-cyp-31A3" /locus_tag="CBG_01773" /standard_name="CBG01773" /product="Protein CBR-CYP-31A3" /note="C. briggsae CBR-CYP-31A3 protein; contains similarity to Pfam domain PF00067 Cytochrome P450 contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR017972 (Cytochrome P450, conserved site), IPR002401 (Cytochrome P450, E-class, group I), IPR002402 (Cytochrome P450, E-class, group II), IPR002403 (Cytochrome P450, E-class, group IV), IPR002397 (Cytochrome P450, B-class)" /note="Predicted" /db_xref="GOA:A8WQV5" /db_xref="InterPro:IPR001128" /db_xref="InterPro:IPR002401" /db_xref="InterPro:IPR017972" /db_xref="InterPro:IPR036396" /db_xref="UniProtKB/TrEMBL:A8WQV5" /protein_id="CAP22863.1" /translation="MGVIIPVVLVAFATVFMWLLFKHLRMRHKLKHINQPRSYPIVGH GLITKPDPEGFMNQVIGMGYLYPDPRMCLLWIGPFPCLMLYSAELVETILASSKHLDK GFAYKQLEPWLGRSILTSRKDQWRPKRKLLTPTFHYDILKDFLPIFNEQSKIMVQKMC YMGKDENIDVLSTVTLCTLDIICETSMGKSIGAQLSENNEYVWAVHTINELISRRTNN PLLWNSHIYSLTEDGKTHEKCLNILHSFTKKVIIERKEALKESGYKMEGRLAFLDLLL DMVQSGQMDETDVQAEVDTFMFEGHDTTSTGLMWAIHLIGNHPEIQRKVQAELDEVLG DEEDVTTEHLARLKYLECVLKESLRIRSSVPIIMRELSEDQVIGGINIPKGVTLLLNL YLVHRDPAQWKDPEVFDPDRFLPENSVGRKPFAFIPFSAGSRNCIGQRFALIEEKVIM THILRHFDVTSIEPMHEVRPKMEIIMRPVSPVHIKITRRRPIVSP" CDS complement(join(246756..247119,247166..247355, 247402..247624,247689..247859)) /gene="CBG01772" /locus_tag="CBG_01772" /standard_name="CBG01772" /product="Protein CBG01772" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WQV6" /protein_id="CAP22864.1" /translation="MIRVVSCVFVLTTSIVTSQPLLFPHGWFESKNLRPRDAIMLNMM AQSNLEYGGVTLEELDKLDAVRKQIPRPEKLARDREEDDVELDRQPAFTAEGEKIENE EKKETDDPEIGNDLKKKAPFRRVQLKLQKKRSTEAEPTKDSANPFEEIATRSPPRDRM TMRQLRNRNRKHRKKMARYRKNGFLTRDDIIKSKASTQSNVKITDRTYEKAEFDEKLR NHAQDTWERENKAAEKVREDMAAGRKEEIEPEPISPAMKLLAKEHSDIDRRIAIAEQT MPRKVDRLPNNPYSNVDLRKPTVLTLPLPPLDKLKEEVQ" CDS complement(join(248167..248395,248457..248720, 248766..249037,249085..249178,249250..249530, 249575..249907)) /gene="Cbr-gcl-1" /locus_tag="CBG_01771" /standard_name="CBG01771" /product="Protein CBR-GCL-1" /note="C. briggsae CBR-GCL-1 protein; contains similarity to Pfam domain PF00651 BTB/POZ domain contains similarity to Interpro domains IPR000210 (BTB/POZ-like), IPR013069 (BTB/POZ)" /note="Predicted" /db_xref="GOA:A8WQV7" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR011333" /db_xref="UniProtKB/TrEMBL:A8WQV7" /protein_id="CAP22865.2" /translation="MGTSQSHSRTPSREPLPNGHQVMDVLDPTDKTPRRGRKRKTGKG DEIETKKIAKLNTCAYVYQKLFLEVRANSAQMYRSFLQGEDSDITIAACGREWKVHKL YLKQTKFFEMMLEGSWAESKSGRIDMEITDPNIDADGLNAVFGSLYHNEIEIDLEKIE GTVAAASYIVLDSVRERCAEMMISALSTDNAVRYYELSTAMGWITEVSHDLLETILTS PNMFTLEGEYDLYQHVLQWIYMKENPDCNHDEPNEQFNSNIKNFFKTANSDFLLMKYV DIISKIRMGQILIRSDTITTIKNDGLIPIQIVDGISSQLWFSLLQNEENPKPLEMSDD EFFETCNRLGRSLDSFPVCVLYLLKQNDTAFQKCWRWVGYNSGVDIMLHVNDYSVCII RNCLNRKTPYSVNLKSAHVLHFRLVICDFKGQISFDTGRTSWAMKPDETKTVFRLNED ISTPISVHFQYLIHKPIDSSTCVKKYVEELKAKNNGDVEP" CDS join(250703..250769,250813..250998,251042..251198, 251246..251633,251683..252084) /gene="Cbr-pik-1" /locus_tag="CBG_01770" /standard_name="CBG01770" /product="Protein CBR-PIK-1" /note="C. briggsae CBR-PIK-1 protein; contains similarity to Pfam domains PF00531 (Death domain) , PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR000488 (Death), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8WQV8" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR011029" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/TrEMBL:A8WQV8" /protein_id="CAP22866.2" /translation="MKRSVLQHLCDILDTDNTWETIAPYMSGIAMRDVEACKRYGSYN QSPSMLLLRIWCSKGFTVVHLYQLFAKTKLIRLMRVMKSEVDEKYHYLEEKVLNPARR LRPIVPPAGTQQTASRLKKIDSKDMTSTPTQSITTSSTNDPLRVAIEGTLPVTYQELS EATKGFSVNNVIGKGGYGTVYKGEIRATGGMVAVKRIFAGNDNSTQQGSKAEKERLRQ SLTELRTLARFRHDNILPIYAYSLEGPEPCLVYQFMANGSLEDRLLCRKGTTPLTWVQ RKEISIGAARGIHFLHSFAKTPLIHGDVKTANILLDKHMEPKLGDFGLCRDGQAEVEA TEKRPLIASHIKGTLAYLAPEFITSKILTTKLDVYSYGIVLLEIASGQRAYSESRKHV VLLNSAS" CDS join(252670..252763,252806..252903,252950..253138, 253186..253327,253377..253470,253517..253709, 253755..253943,254248..254438,254491..254821, 254874..254999) /gene="Cbr-nol-9" /locus_tag="CBG_01769" /standard_name="CBG01769" /product="Protein CBR-NOL-9" /note="C. briggsae CBR-NOL-9 protein; contains similarity to Pfam domains PF03205 (Molybdopterin guanine dinucleotide synthesis protein B) , PF06807 (Pre-mRNA cleavage complex II protein Clp1) contains similarity to Interpro domain IPR010655 (Pre-mRNA cleavage complex II Clp1)" /note="Predicted" /db_xref="GOA:A8WQV9" /db_xref="InterPro:IPR032319" /db_xref="UniProtKB/Swiss-Prot:A8WQV9" /protein_id="CAP22867.2" /translation="MNAKMTIWKSTLCNLERDFPSTDRVPFFAWATGKASINDFVLPS VSCEKGNFLKISAPQRMDLPVILKTSIDSSTAYKHSRLKFRLKEVAPKCYSDIMQMIG EKEPVVLVFNKVLDTAEATVSGVITNFLIHSSIQKQIILPPHFHISRDDFRIYPQDDE ARLNTHLNRLNSLKADGVKTSILPIGHKGAGKSNLMRNLVNRCLSNGYEHVYVLDCDI GQSEFTPNGCISLTKVTSPLLDKPYGHQKKTFDNSYFYGDITVNDNNIDHYMDIFERL FNKFKLISEPGSVCIVNSMGWIVDEGAEILDGIIRVIEPDLCVEIFRDQTEARYSFKE FEKCKVVEIFANNSVGVIGLPNQKKLPAPLHRELTITGYFSSLLPRPTIASFASVPPY RLNFRNITICLPMDLLVEDCHIFSSINTQLIALCVKNPDLKTRKLNGKQDMPSLSVID STSPALQCIGFGIIRGVNVEERSVYVVTPVNLLKLQEPPLLVRGMRIQTPSQFFTADP YNRCPYVLNLPDKSSHASANLDGLYEPSINTTQFKRSRRF" CDS 255565..255792 /gene="CBG01768" /locus_tag="CBG_01768" /standard_name="CBG01768" /product="Protein CBG01768" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WQW0" /protein_id="CAP22868.1" /translation="MGSIQLFPASHIESSLLIRCPVIVETPIVFVEVIGYLAFPAALE ARYNSDSSSTPRPNFSLISPAYIAPGDQIWR" CDS complement(257639..257866) /gene="CBG01767" /locus_tag="CBG_01767" /standard_name="CBG01767" /product="Protein CBG01767" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WQW1" /protein_id="CAP22869.1" /translation="MGSIQLFPASHIESSLLIRCPVIVETPIVFVEVIGYLAFPAALE ARCNSDSSSTPLPNFSLISPAYIAPGDQIWR" CDS complement(join(259252..259392,260434..260989, 261037..261317,261366..261636,261681..261814, 261861..262042,262943..263205,263256..263422, 263469..263596,264490..264640)) /gene="Cbr-mam-3" /locus_tag="CBG_01766" /standard_name="CBG01766" /product="Protein CBR-MAM-3" /note="C. briggsae CBR-MAM-3 protein; contains similarity to Interpro domain IPR000998 (MAM domain)" /note="Predicted" /db_xref="GOA:A8WQW2" /db_xref="InterPro:IPR000998" /db_xref="InterPro:IPR013320" /db_xref="UniProtKB/TrEMBL:A8WQW2" /protein_id="CAP22870.2" /translation="MISFWKLFILLALFLPTGIEACHAQFQKELRYLDLYLGIKPDNN GDIPVEEAVKFATYIESPDELNCDFETECLWRNAPTDNLLDTSDWWYFKKNDEKTFPV QIQPGNPKIPKGEHFIIAGNTTKTANGAVLSSAPVACQKGFANLTFSFWLYNNAQVEV VILRAMNRRRHLQVLMRPKMKCDFLGAANEECRVEIPPIKEPFRIGIRAFDLKDNTVG SLAIIDHIRYHGKICQQSPFPSSFSSLRIPPYDNSPLVRMSDLSCERPLRSCRWGNAA KSQLSEWRVGRSIDRWVDMFEITANQSHPNSSFLFLAVDSFSPRPYSSLTSQVIPCSQ RTTSLSLKYWMKTGTQAEICAVDEDGIALSCAYLEPNDSPGPITIDLDSYSQPFKFTV GIIAFDENSFGLLAISELRVAGLLCSEPAPPIVTTISPPTIQHIFGLQPGNGRYVPYD LSLNCDFTKDYCSQWVNYDGIVKYGVMPRDSDVFPVPKGIKGNVAVFMMQNATVSELR SRMVPCSINGRIDVEYMRSEDAQVRICALEQCVDGNQTNGIVSIGVSSTTPFYVTIET SSRDNAVVIISKVSTSGEFCPLKTAEQTVCDQLVCDFKRKQFDARIIKIVLFSDTFCS YETIVEKPGDVPVLKTGNGASVTLNGGGIRAVLVSPTFDLAYPSILTITLSQSTFGSR VLLCPDVTSDPTLCHELSGPRVLDSSDKQVMFPLDIGARSFSLVLLHDKSIEFGPATF NIKSMHLRTVNDEEMCF" CDS complement(join(265059..265205,265250..265390, 265436..266414,266463..266842,266912..266967, 267013..267212,267259..267343,267389..267639, 267689..268089,268264..268377,268617..268721)) /gene="CBG01765" /locus_tag="CBG_01765" /standard_name="CBG01765" /product="Protein CBG01765" /note="contains similarity to Pfam domain PF04869 Uso1 / p115 like vesicle tethering protein, head region contains similarity to Interpro domains IPR006953 (Vesicle tethering protein Uso1/P115-like , head domain), IPR024095 (Vesicle tethering protein p115-like)" /note="Predicted" /db_xref="GOA:A8WQW3" /db_xref="InterPro:IPR006953" /db_xref="InterPro:IPR006955" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR041209" /db_xref="UniProtKB/TrEMBL:A8WQW3" /protein_id="CAP22871.1" /translation="MFAYSTSSFTGSTLSVRSFSSDATTISNAFYNLPQSHVRNRLQA KKAKKRGSNASRQSSKRAPLRTHPPIPRQMSLFRNFFGGGQPDEEEDNGAEFVETLVE RVETCSAPEDRRDALKGLKSVAKQYRLAVGTMGMNAYIDVLETDRLNSETMTLVLDTL ATVLSADDDSSENDELGERLAEMMLKRKGFIASVLAAVDQFDFGVRRTAVQLLSNLLR HRGTEVQNAVLQQPAGLSKLVDIIHDNREVIRNEAILMICELSRANSQIQQLLAYDNI FNDLLNIIETEPFDSIVIEDCLFVMLNLLRKNSMNQQLFRENQLVARLGGILHTFLYG NEETEDEVDAAEWPKQRTANVIFLLQIIRTLVSPDNNSQNTHAAQKVLNQTKILEELI RVLLTEIGASFEILAESIIVVAEAIRGNYTNQELFASTVIDNGEDGPRSSLVVLLLSM NAEKQTYKLRCAVFYCFLCYLFDNEFGKARIIETLLPNSQPSNTPTTGSLILQAMSSA ESVQAWFGCVTLMHCLYDVDHLCEQLLRVKINIVTEQPELALLDHVSQLLISAGNRRP QSRAGLLMLLGVWLQNCPLAVSAFMAKEDNLVYLTTHIVDECGEGTESEQQALRGLMA FVLLCCLKNIQDKDTRSSIETLISRRVGKEVVLSALEGLTRTEQFVRAAQKQQPSESN KNNLFLDFNFVKLFKSLEGTLAKQLKPNGEFNGTSNDSIIQSFKELIKRQDGDIAQLK QENKKMSGEIEKLTAEAQNKEAEREVEQLRVKLDEAAAFRTQTEVLNSQLAEAQRLTQ QWYAEAERYKQWAQQWQNYQLTQLPNGAEVGVTQLQQQVAELEQQLGYGYQAFEQQSQ TILHYTAENAQLRERLAKADASLSEANSKLATVNSQPVSNGAVENVDQKASDDELAKL KQEQEELLMLLADQHNKMSVYRRRLKSLGQPVTDDEDE" CDS join(270310..270409,270914..271035,271086..271163, 271307..271373,271415..271533,272599..272763) /gene="CBG01764" /locus_tag="CBG_01764" /standard_name="CBG01764" /product="Protein CBG01764" /note="contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR007087 (Zinc finger, C2H2)" /note="Predicted" /db_xref="GOA:A8WQW4" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR036236" /db_xref="UniProtKB/TrEMBL:A8WQW4" /protein_id="CAP22872.2" /translation="MLKFSIDVLLAPGRSSGIFPFPAKTCLFADSSSGEDEANRKKFP CEICGKQFNAHYNLTRHMPVHTGERPFVCKVCGKAFRQASTLCRHKIIHTDSKPHKCK TCGKCFNRSSTLNTHVRIHQGFKPFVCEVCGKGFHQNGNYKNHRLTHEETKKYSCTIC KRAFHQSYNLAFHMFTHEEHKPFTCHVCSKGFCRNFDLKKHLRKMHSHSIIPPNTP" CDS complement(join(273197..273236,273281..273403, 273445..273844,273903..274065,274115..274523, 274572..274681,276224..276430,276473..276718, 276768..277520,277574..277819,277869..278001, 281595..281738,282157..282302,282352..282485, 282536..282622,282675..282770,282825..282902, 282951..>283122)) /codon_start=1 /gene="CBG01761" /locus_tag="CBG_01761" /standard_name="CBG01761" /product="Protein CBG01761" /note="contains similarity to Pfam domains PF02893 (GRAM domain) (2), PF00566 (Rab-GTPase-TBC domain) contains similarity to Interpro domains IPR000195 (Rab-GAP/TBC domain), IPR018247 (EF-Hand 1, calcium-binding site), IPR004182 (GRAM)" /note="Predicted" /db_xref="GOA:A8WQW5" /db_xref="InterPro:IPR000195" /db_xref="InterPro:IPR004182" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR011993" /db_xref="InterPro:IPR018247" /db_xref="InterPro:IPR035969" /db_xref="InterPro:IPR036014" /db_xref="InterPro:IPR036017" /db_xref="UniProtKB/TrEMBL:A8WQW5" /protein_id="CAP22873.1" /translation="RSCEKATQYFKLQRRKGHGTRGFSSLLVATIDSVFDTRPPPYRI IYDFDNEDIHISIVLAVAVEQKEIEEHWSYIQENFIPAIDSLKFEKDVRRYVTTKVDS LASDSEEVVAPYSEELDSVSTRSCLEKFHKTFSIPPDEKIVNYYKCCHWKGKVPAQGD LFLSVNFLCFHSFIMGNETKIKLKWTDIVRLERVTSILFPQSILVVTKEDKKFSFSMF LNFEETFQLASQLANIAMKQLIEEEGFCEDTSLRKKMLMESEHRRTIKTKASFLKRDL DARHRSDAFRCQFNLPFMEKLDGDTNCRLFTPYDRRHVPGKLFVSTNFVCFASRTERL VSIVVPLIEVTSVEECSPVSATLTTQGILLCLRNKSTVIFSDVPDRDRVLSKITVYLE RGKIERTMEKAKADTEKSRSSTSSSSSSFDSLTWDYPLIEKYPFGADASDKCREKWNK YLNEYGSGVCMYRTVELHRLLLEGVPLQLRGQIWMVCSGAAAEMALNPGYYRELLHKN QGVYSVALEEIERDLHRSLPEHPAFQQGPGIGALRRILTAYAYRNPNIGYCQAMNIVG SVLLLFTKEEEAFWLLVAVCERLLPDYYNTKVVGALVDQGVFSELVERLLPSVGAQLT RLGLDDMVALSWFLTVFLSAIKFDAAVRILDLFFFEGARLMFQVALEMLKQNEKLICE SKDDGEILMSLAKYTESIHEGDNVIERKPSGVTIGTTILSDLEEAASTVMNFMGTEGT RTFPKMPIGELLGNSYQNFGYCFTNENIETLRLKNRLKVVQNLEDNQMRSIIKSIGKD CKFTNEELEALYNVVKEEHLLSWRHRLGVSARGKMAAVTERPRPDPCAQSQYRLDYDL FSEIFPRLLPWPVTNIFVIRVFRLLDISDNGLLTFRDLVINLSILLRGEATEKLALFY KCHLPPAFNMSDLDGLDPIEESSPDRNGAEPELAMEATDLLRSPKMAAGQVKRSCSVD IPRQPSDQNLGDSYKTRCSTSSAVMVPAHMEERASDAESLIDMIAAKSIGSCPSETGI DRIQVADVASEESYSVVDESIEKMKQLRVKTISSPDSSTKLEMKMLPAMSQIQFIQLW KTFYDMLSGKETEQSVFHSLAVTGTLLLQLGETHRELQAKLEAQIADAMQDLDETLKQ PDGDDEFEEDRKIDPIEVQRKRIGDMQTCFSMADDEWRVNLEQILASVIAESTLSDFF ERKYSLDVLIKKYYKTRFSESSIN" CDS join(275195..275711,275759..275954,275998..276154) /gene="CBG01763" /locus_tag="CBG_01763" /standard_name="CBG01763" /product="Protein CBG01763" /note="Predicted" /db_xref="GOA:A8WQW6" /db_xref="UniProtKB/TrEMBL:A8WQW6" /protein_id="CAP22874.1" /translation="MHHSAIHSVLIVMFLNSLILFVAACLKTIPSEAVSIAGQLDNAP LRRMPVLPAQDDYSVHIQQFRQAKTFPSPQPIETATSASASNVKRSSSSSDGDDFTVS DKSVEAPRVASREGSKKNAKTFAVKTNTRSETKGNENENVSHPEPAVSHRDSNNVHDD RDLFEALQVEKPDICGSCPPLWMKNTAEMKDICSNHESVSTFFSMTMDKRDAQNIVDT SDLKECTRTITCTEPHMLVKWYESELCDVHAPYSGSLITDSSNTFIYKCNGTQWTLHG FPLSSVVCAVSSN" CDS join(278638..278901,278983..279081,279130..279393, 279433..279508,280299..280395,280454..280619, 280665..280862,280908..281135,281182..281499) /gene="CBG01762" /locus_tag="CBG_01762" /standard_name="CBG01762" /product="Protein CBG01762" /note="contains similarity to Pfam domains PF04784 (Protein of unknown function, DUF547) , PF00610 (Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)) , PF00462 (Glutaredoxin) contains similarity to Interpro domains IPR002109 (Glutaredoxin), IPR006869 (Domain of unknown function DUF547), IPR000591 (DEP domain)" /note="Predicted" /db_xref="GOA:A8WQW7" /db_xref="InterPro:IPR000591" /db_xref="InterPro:IPR002109" /db_xref="InterPro:IPR006869" /db_xref="InterPro:IPR036249" /db_xref="InterPro:IPR036388" /db_xref="InterPro:IPR036390" /db_xref="UniProtKB/TrEMBL:A8WQW7" /protein_id="CAP22875.2" /translation="MTGNLNNFSPVLLSFPIKYNFRIKISLLQQKVLPLQMNLSQKSS SFEDFAGQVVIYTEIGNARCAKGRDLLRREGVPYTDVSLDSFPQHTQEVFDRTGTEVL PQIFFNNIYIGNEADLERVIGEKNKWESLIEHVRREKCTNGPIVPHPMNAIGFEEYDN ENNNKCCEEVLWVPDEYSKLVRDMKNAQLIKNNRVSDLERGKGNFVSKTVKLKVYRSS FKGEQLIEWLMRQKGIRRSEALEVGQELIDRHVGRQTSKEAGMTFSPDRYYQLVEDDE NKPLNAVQNGEDEEEKKPRIPVAKCNEKFTRLLKPVYSDILTDHNQSIIYGGLSSNDN FTRYIQFARELNQVTFDDSTPDDRLTFFINVYNMMLIHITLKHGPPIGIWQRRKLVNA TYYLIGGHRYALHSIINGILRANKKGPGMLWKAFGKQDERLPISLSVCDPLIYFALCS GSKTTPPLRVYHSNTIHQEMRENARTALLKGDKFLRVDMKKNVIHLGKTFKWFSDDFG GTIEKTLQWILDVIDTDVSDKKNNLQKLFFTGEYSVEYIPYDWSTNGRMDEKEKEEMT KNE" CDS complement(join(286078..286249,286300..286385)) /gene="Cbr-nlp-17" /locus_tag="CBG_01760" /standard_name="CBG01760" /product="Protein CBR-NLP-17" /note="C. briggsae CBR-NLP-17 protein ;" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WQW8" /protein_id="CAP22876.1" /translation="MLNKSTILFCVLVLALNVFASAAYESDGEIMRPPFRTLKRGSLS NMMRIGKRQMSHQQEYVQFPSEGQVPCESCNLGTLMRIGRR" CDS join(286763..286952,287061..287314,287366..287929, 288255..288389) /gene="Cbr-seld-1" /locus_tag="CBG_01759" /standard_name="CBG01759" /product="Protein CBR-SELD-1" /note="C. briggsae CBR-SELD-1 protein; contains similarity to Pfam domains PF02769 (AIR synthase related protein, C-terminal domain) , PF00586 (AIR synthase related protein, N-terminal domain) contains similarity to Interpro domains IPR000728 (AIR synthase-related protein), IPR010918 (AIR synthase-related protein, C-terminal), IPR004536 (Selenide water dikinase)" /note="Predicted" /db_xref="GOA:A8WQW9" /db_xref="InterPro:IPR004536" /db_xref="InterPro:IPR010918" /db_xref="InterPro:IPR016188" /db_xref="InterPro:IPR023061" /db_xref="InterPro:IPR036676" /db_xref="InterPro:IPR036921" /db_xref="UniProtKB/TrEMBL:A8WQW9" /protein_id="CAP22877.1" /translation="MTSINRIERILEGFDPVKNGLDGDFVLTKLTAMKGCGCKVPRDV LLQLLQTFKTDLVINNDEIDIGLDSCVIPLRHPGLRLVQTTDFFYPLVDDPYIMGRIT CANVLSDLYAMGVSECDNMLMLLGIAVDLNETQRDIIVRLFIQGFKDAADEADTKIRG GQTVRCPWLLLGGVASSVAHESEIIKVDRAVPGDVLVLTKPIGGQVAVNSYEWIKNNK GKIEELGLDSSKIRKAFQQVCEQMSRLNRNAAKILHKYEAHSSTDVTGFGLFGHSENL ARVQKQQVEFVIEKLPIIEYMDEIADRMIEKGGEGFRLFQGRSAETSGGLLVAMSMEN AQKYITELSALDNAPAWIVGRVIAKTTDSFASIAPDVVRLSIPSSI" CDS join(288502..288751,288827..288939,291056..291134, 291180..291439,291486..291584) /gene="CBG01758" /locus_tag="CBG_01758" /standard_name="CBG01758" /product="Protein CBG01758" /note="contains similarity to Pfam domains PF12695 (Alpha/beta hydrolase family) , PF07859 (alpha/beta hydrolase fold) , PF10230 (Uncharacterised conserved protein (DUF2305)) contains similarity to Interpro domains IPR013094 (Alpha/beta hydrolase fold-3), IPR019363 (Protein of unknown function DUF2305)" /note="Predicted" /db_xref="GOA:A8WQX0" /db_xref="InterPro:IPR013094" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8WQX0" /protein_id="CAP22878.2" /translation="MENEDDKLSAEYSCSLHSKNRETAGDEFDAKVEQIYKDLKDSSI ERKEDISYKPNGELTQIDIWGPENAQKVFIMIHGGYWMVVVGVAQSLGYTVVSIGYDY ANKNHTLRQTIQEAIDGVRFALDRFENAKKVVIGGHSVGAHLAFQAVTRIQDLRISGA FLSAGIYKLHELVNTKYGRDLALTPEEADLCSCDYDLLKTVKFPILIANCKLESPKLF QQNVEFSQLVKNAQYKEYAGEDHFSILTELTNENSVVHNDFYKFLHSI" assembly_gap 289476..290033 /estimated_length=558 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(291812..291880,291927..292609, 292666..293276,293390..293721,293758..293952, 294000..294398)) /gene="Cbr-dcap-2" /locus_tag="CBG_01756" /standard_name="CBG01756" /product="Protein CBR-DCAP-2" /note="C. briggsae CBR-DCAP-2 protein; contains similarity to Pfam domains PF00293 (NUDIX domain) , PF05026 (Dcp2, box A domain) contains similarity to Interpro domains IPR020084 (NUDIX hydrolase, conserved site), IPR007722 (mRNA decapping protein 2, Box A), IPR000086 (NUDIX hydrolase domain)" /note="Predicted" /db_xref="GOA:A8WQX2" /db_xref="InterPro:IPR000086" /db_xref="InterPro:IPR007722" /db_xref="InterPro:IPR015797" /db_xref="InterPro:IPR020084" /db_xref="InterPro:IPR036189" /db_xref="UniProtKB/TrEMBL:A8WQX2" /protein_id="CAP22880.2" /translation="MSKEESSSVQKLLASLQQAQKKEPVVSVNEPSTSKPKKNTNDKQ KKRVDDKKKQKGASVGARMQQQQAENVKSQTKRPRQISTSKGGGRNASGSEYSQQQSV QQYPQSRGPRIPSDILDEIEFRFISNMIESEINDDIRVCFHLELAHWYYIDHMVEDNR YTRCPNVGTRDFTIQMCQHCRSLRKYAHRADEVRKLFQVIAKFREYKSSVPTYGAILV DSQLQNVILVQSYFAKGNNWGFPKGKINQNEPPRDAAIRETFEETGFDFGVYSEKEKK FQRFINDGMVRLYLVKNVPMDFKFEPQTRKEIRKIQWFKIDDLPTDKNDELPAYLQGY KFFMVMPFIRDIQSYIQKEREKLRRQQASAAPVASSSAKSTLPGASEQSILSQLFPSV TKSATNQNVTPNPPILKRLTSEELFSAFKSSPMPQNKESEISRPVLPDMSPSVNGLDT LALLGICTPLKAGASLNQFAAPPRNCPKINEEVEKNFKDHETEVGFAMPTDLQQPLVT TDHPWQQNRPLDSGAVPKTNDSHQGWLDTPLVNTIMHSPNLPIHSSHSPATPSTVLGH LIGKPIQPQPILPQPASQSALGSAEKPKSSKINLSDNSAFTAINSTQKQQSVPKATAA PGSYKVRSSSLSGSTKSKAIRGLFNSVTSPVSSDLPSVHGDDPHMWEEILLREQFAAT AGTSISSLAASNQELAMINRDTPIENRNPYMNQIYQQIPNRPKCSEVPCCTQWAKKIQ LDTDYIAGPVSSWMQQFSLHKK" CDS complement(join(294817..295299,295344..295577, 295696..295872,296078..296219,296880..297345, 297405..297547,297601..297722,297773..297866, 298010..298176,298223..298448,298498..298646, 298689..298821,298871..299062,299169..299522, 299567..299718,299764..299902,299947..300072, 300952..301046)) /gene="Cbr-rsd-2" /locus_tag="CBG_01755" /standard_name="CBG01755" /product="Protein CBR-RSD-2" /note="C. briggsae CBR-RSD-2 protein; contains similarity to Pfam domain PF07547 RSD-2 N-terminal domain contains similarity to Interpro domain IPR011508 (RSD-2, N-terminal)" /note="Predicted" /db_xref="InterPro:IPR011508" /db_xref="UniProtKB/TrEMBL:A8WQX3" /protein_id="CAP22881.1" /translation="MCLLRVEKKLGKLKSNIDVTEFIEKMYEFEKKSKMGESEVTAIV LSFDEASHTAMCFSTSLEAMINIKLPLELPITTGKLIRFTDYDYSNENAVYTPVSKPD SISVTEDDGVRLDGNRLLIEAMIAFSVESNHPTYSKKKAYAGVFGHVEVDENVALRME RNQVYKAELTFNNSTELSQKSTYGFKVWSICGDASPEESEAFMTSLYLYEDKIRVEPV EPENTNLLPMNEFSQLPSGHESVGNSYRPPNKVNEDSERLQAGADNRSIASSESSRSS QRNLGASERSERLQFGRQTSRNNFGAQNPTSSGQNMIPEDKEIENCAVVLDSSFREIF VYETTLLKLMKLENPNNERCAKWGVVRFIPEGPQNGTTFVKANSFRYSPPGAAVILTP NGPPQMKTHLVFSNNNGYKTYNRSCGFSNRFGLVEIADPADGLLGNTVYSTNIEIKQW LDPLEPVFRSVSKLKEEDVEFSDDFANSMVQFEENLKKQIQSNGLSASKMPQMDRLPS RPQKSSRNKPDRTNLPDWINGLVVSVRKVGNRRWGRLLTPVGDAVFSEMPTHGSTGKH VQVLSWISVRITNVSGELWVTKIEKDAHEFLDTSVAMTGDEIEVTTVLTSTSNFSTVD NINYFKHKPLGNVQTENNLDFGQNGIAHVVCRRGFGRPIPSKKGEECYWFARQIFPQS RSPERRSRASEYPSNDSGWDNRQGNRQQPQDPFSNPEKNIFADHESQDPYGNPEKNVF ADHGSQDPYCNPEKNMYAGHGSQDPYRNPEKNTFADHVSQDPYYNPEKNKFADEGSHY GLSSFTPTNGNQYDLRQNGFNNPNSYCEHSGPQSYQDHSRPMSQCQPQFPQPSPEQYR PQQPFGEDTMSFSGRNDGTPLNCLIVSRRKNIMLAYVFKYRTSADIVEKRDVGLSILV NASECYCNLPIDLSQPLTMYQDYSNRTGNFVLASGEVGSILLDNSTRDVTGNKGAAAI TDRYRGKPGSSDMVAQCQYTECLVPPAMLNRAGDNEDVFFAWKVIQVIGTNQSFEFNE AESKKRNLGPDAHELEEDDDISRQKRQAKMAYEASLRREQEMHSSASSNIGPFQNQPS GSQYANSERYGTPNGSRMFGSEQGFCTAPQSINAGPSRSETPVAAAFNADPYQPSAVV NLAQSIKNRIASYTRNPDLAAHMEAVVPGNLTSLEYEIENLLRMCQSSNRS" CDS complement(join(303269..303289,303333..303388, 303435..303513,303884..303972,304021..304232, 304778..304803,308600..308672,308870..308950, 309278..309412,309531..309911,309959..310179, 310654..311104,312149..312231)) /gene="CBG01754" /locus_tag="CBG_01754" /standard_name="CBG01754" /product="Protein CBG01754" /note="Predicted" /db_xref="GOA:A8WQX4" /db_xref="UniProtKB/TrEMBL:A8WQX4" /protein_id="CAP22882.2" /translation="MPSVAADAIHAVGTVFWTAVYFVYYLFKGRQEWKCEKNSQPVIQ YCCVDGTPCSDHQSNGVRFRKNPPATNGYSNQEHHNHNSTPKSYYSENAGIRGFFKSL WNNVKKGSVKVWEFSKKAGRKLWNWIKYGAHFLWKVIKCVFGMIYAFIVSNNVPSQTL PSTPKPYKATPSSPSYNKVSFEYPPDKLNEAELRTATKQEIEDEEPDEPTIYEDVPKR EEPSIKVPDTSESFYYERVFEEPKQEQVISEPPREKSVPPPPPPPPPPKPVSREPSRA RSMTPGARERREVKGGIGGFKSDIMDELEEQQRARQERASVNREMTQSCHPDMAQWKA NEVVDRSANSTPWRASSVGPTMRRLEQVVSRVEGDDQKEANFVFRPQKIVHSSEEYQN RNKQHSDNGFMMGRSVFSPVEEAEQMRKDINSKQQSYSSPQYQSGNWMEGQRSRQINA SSESAVIKSFRDETTANFTVVLRSSNPFGSAAYKSSPYASHTARRSKTPIRNPEAEGG VESIARQWPPVSNATAAVGNARNDWVGRSMRGVEENDDGLVMTMCRRVVEKKKDENWK WRDESGRLLDERHNNTWKGELDTLLRDGPNEGRHWSRTVEKLPTGDTRFQDVNRQYNK EFVVESIVRNY" CDS join(312543..312618,312652..312842,313718..313817, 314795..314931,317451..317669,317740..317865, 317916..318024,318223..318412,318458..319695, 319739..320217,320266..320579,320716..321313, 321359..321561,321650..322017,322066..322463, 322858..322929) /gene="Cbr-qui-1" /locus_tag="CBG_01752" /standard_name="CBG01752" /product="Protein CBR-QUI-1" /note="C. briggsae CBR-QUI-1 protein; contains similarity to Pfam domain PF00400 WD domain, G-beta repeat contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR001680 (WD40 repeat)" /note="Predicted" /db_xref="GOA:A8WQX5" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR011047" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:A8WQX5" /protein_id="CAP22883.2" /translation="MFRGGNSEKRLPYVSTVFVVGNDAEVVSEFNIERRTLWQDVLPD LQNMGFQSNFDLEFCDVALENGELSNAVAEHVLKMWKENPRSWMVILLGNRYGNVSVP TALRKEEYESIRSSIFEENGNVRIFEKAYTINRNTPVEEYRLIPSAIKDKKQVAEIIK ALQTGAKAAHEEGAINQVHEQRQNRFFSSPLESFVRSVLQVSPCRCLFLLRKFDQLVA DPNSPNVFLEINEQSSRKIEDLKNEITLKMNDRVMTHVLRPESTDINYFFNSRDGDKY REKIARQFNEKLKNHLADLNPPLRPEPPRSSIELAVNEARTHYEYLEQQLSIGNLKRD YDKRLDELAGVKVNRGIFLIQGTDLCGKTQALCRLYNKISSKDAYKIIFFTNLTYSSN FAHEAWRTICLNICEMANIDAKEVLEHFKLAGILKCLEQIVQKADKPVCVFIDDVHLL KFGHLLSQVGRRTESVSISWFDFKKSENFQAPDKLSLFMTSSNVSPVNAVFAVTQTVN VDVISENEVVGMVQKMAENVDRKLTNEQLSTIRPLMTSKEGILIAKSVAHEILLNGSS SMKGGIEGRLARIEKEFGKAAVSNVVKYIACSSHGLTRLEIHDAISADREALEEMNMP VVFSLLTLDSIIEALGPLLRKVLIDDRLCLAPSHSCLYIFLKSRYLVTSLEIRSSHLH LSDLFADLLVDNEQSPRHEIAYQVSREICMILNSTSLLQTFSQGIKRDNGSPNFRRLR LLWYHCLHSGNLDRLKELSLCHFEYVDFVTRYFGISHLLSLYEECATQILHHDLQVLS EQVLVPALVTMARDSEQLAAEVIGRLRFTRTDNSPFLNNLVDQAMSWVDLYNRQPLLV PLTCWISPPATKVCRSFTLKDWKPGNTVLALFANHQYILISGNQSDPGVIYAYHIASE QLVGTFKGHTAAVTCLCSSNDSSFFVSTSADKTVKVWVFSQYEPTMSLTHHTAKVTCA ILTSDDQFMITASADSSAKMIKVETGDVVRSFNDHTGSVVSLQLTSNNQFLITGSGDF VVQMWDVTNGKCISRMGGLMAPVSTLAITSNDAFVVVACEDETLKVFSTVGGQELHEL MGHEGKVNSLVCAQDDCQLFAATKSKIFCYDIHNGQMIDVLDIAQPYPICSLRISSDN NFLISPCGPKVTIWNVTKRNHDAHDVHADKEGFLTAVALSNDDKYAACGTNNGIVALW DLEVCQCVFTTVQNKGDPITCIRYSIDSQYCISGNQAGCILILDAQNGVVVRELFMHS SEVLSIMSLVQNKMISCDIQGKMVIWELFGDDDTPEMVATGVKPPIFVPPTGRIMVGH CSLSNKEMKIWAFPDEGPPITRAKLSHSDEITCFATSPKGGNFIATGSRDMSLKIWQI DKGFLTQVLVGHENVVTCCCISFDERLVVSGARDEKIIVWNVQSGDMVCTVNTTAAIT SLSMTGDSTVVFSTTEDGWVETWSTTKGRLLSTFNAHRPIKKLINSYESHRMLLLLEN CAQLPILCLHNTPAVGIEATRRRSARAQSVSSASNEPVASTGSGEIKKDPSSSSNNGG NGQPAPRATAPKPTFDMLERSKSRTSLIEKDRATTLTQSNAPPPQKSNMCTIL" CDS join(323769..324040,324446..324599,324722..324994, 325041..325304) /gene="Cbr-srd-10" /locus_tag="CBG_01751" /standard_name="CBG01751" /product="Protein CBR-SRD-10" /note="C. briggsae CBR-SRD-10 protein; contains similarity to Pfam domains PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) , PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd) , PF10326 (Serpentine type 7TM GPCR chemoreceptor Str) contains similarity to Interpro domains IPR019422 (7TM GPCR, serpentine receptor class h (Srh)), IPR019421 (7TM GPCR, serpentine receptor class d (Srd)), IPR019428 (7TM GPCR, serpentine receptor class r (Str))" /note="Predicted" /db_xref="GOA:A8WQX6" /db_xref="InterPro:IPR019421" /db_xref="UniProtKB/TrEMBL:A8WQX6" /protein_id="CAP22884.1" /translation="MWPDTLYWIFIGIIDILAIILNAILIYFALYRTPKMVRVYTTLI INLAFTDCCSAFLNFFVQQRMIPSGFTIGYISNGWCKLIGYRFCFLSHNLMAHFIVHS NYSLVLSFAYRYYILRKPEPRRKTLLIVLFFTYLPSFLQLVLYQFAESDPSEIVRLLQ PYHPTYNFTGLTVSGVADIRSVYALYKILQMTVMTVPIFSTILFLRNKIINRLLYRGI NISINTKSLHSQLLMALTYQALLPTLYSINVLMYVLEQFGVYSTAFFENFLMSGLVLI PFFSPFTSFFFFTPYKRILLGMVLKKIDKRPAATSETGPGSFPI" CDS join(330199..330268,330377..330965,331014..331245, 332622..332759,332808..333012,333403..333926, 333973..334080) /gene="Cbr-set-15" /locus_tag="CBG_01750" /standard_name="CBG01750" /product="Protein CBR-SET-15" /note="C. briggsae CBR-SET-15 protein; contains similarity to Pfam domain PF00856 SET domain contains similarity to Interpro domain IPR001214 (SET domain)" /note="Predicted" /db_xref="InterPro:IPR001214" /db_xref="UniProtKB/TrEMBL:A8WQX7" /protein_id="CAP22885.2" /translation="MTSSSLRRSTRGKNTRFPRSSKPQITPVKTRTVTLLPETKAMKK LLSKDTKMLTVAQAEKIAAYLRIIALKNGKRKPKSKIGIAKKYRKRNGARDSSSETSS EDSEGTSSKDWSNIIKAQPDVTNKKEDKSVPGETYSIGNLRTKDSIRKDLKVVKWNEE ENLIQCEIQARLAIQTDPELRGFYKRKIDPRIHNGEMKTMVRIHQILVEKKGTLDIVF NEALLKFIKNERYLPPKQRLLMIGNKSLDWQTNVKVFSDIPKENPANADIPNTMLYRY TNSLHVDKKKFKNLLDLGKTEVKCECCHSGSVVPCWANEKCPCYKQNVRLRGIQKIMN QMSHSRTNFSTFEPIYLRDNDSYFDTFGFACSESCGCKGRCTNNVTLLLEKDIYQLEV FRKNANMGFGIRTNTAIPRGTPILEFTGELVQGKVPVSDGDYVYSVFQEAENGEDLIS ATLMKEKKVNKKQVQELKEHLAEGKEWFINPKRIGNLARTCCHSCEPNLSLVRVFQKG FTPAHCRLILVTQEVVFPGVEVRIYTIHKTLLFFIFQLTFDYGAKYIEEHLKNNCLCG RASCKSSPLYKMMDEANEKSLEMYQTLRYHYRYNDYKTKVLDPIEEKVAAGTSST" CDS complement(join(334398..334503,336302..336648, 336693..337018,337065..337305,337510..337633, 337679..337857,337900..338017,338065..338136, 338389..338477,338524..338610)) /gene="CBG01749" /locus_tag="CBG_01749" /standard_name="CBG01749" /product="Protein CBG01749" /note="contains similarity to Pfam domain PF00860 Permease family contains similarity to Interpro domain IPR006043 (Xanthine/uracil/vitamin C permease)" /note="Predicted" /db_xref="GOA:A8WQX8" /db_xref="InterPro:IPR006043" /db_xref="UniProtKB/TrEMBL:A8WQX8" /protein_id="CAP22886.2" /translation="MKMKEEKDDLVHHVNDIPSIPTILLLGFQQMMICLSMLLVVPYL VSGMVCPGDKETEIRVQLISASFVTSGVATLLQTTFGMRLAILHGPSFAYLPVLNTFQ ATYPCNEQTDTSLWQHKMQMISGSCLVAVLVMPLFGITGLIGFLSKFIGPITIVPIMT LLTISAVPDVEQKMALHWMPSVEFLILVVFIVLLEHWEMPIPAFSFKDKKFYVARRKI LSQFPYIIGIAIGWFICFILTVTNAIPVNSSARTDQNSSIETLRSTPWIHFSIPGQYG TPIVDVSLLCGFIASSFVAMIESIGDYNLCAKLSKQGKIPESNLNRGFIVEGIGCMLA SSFGIGTGVTTYAENIAIMSVTKVSSRITMQVAGLFLLIAGIFSKFSAVLAMIPEPVV GGVLAIGICMVNGVLLRNLMTVDLRLSRNLNIMGISIIMGLTVALHFENNPLKTGNQM VDNVFGTLLTIRMLIGGIIAFVLDNIASGPSLTIVLLLKFRFPGATREQRGFRSSDDV GDEEILIENNGYALPSTLNRFFLKHRWLTYIPLVPSRNEILDIEEKRMDVKYKL" CDS complement(join(338978..339060,339108..339299, 339491..339596,339647..339741,339788..339891, 339942..339997)) /gene="CBG01748" /locus_tag="CBG_01748" /standard_name="CBG01748" /product="Protein CBG01748" /note="contains similarity to Interpro domain IPR013090 (Phospholipase A2, active site)" /note="Predicted" /db_xref="GOA:A8WQX9" /db_xref="InterPro:IPR033113" /db_xref="InterPro:IPR036444" /db_xref="UniProtKB/TrEMBL:A8WQX9" /protein_id="CAP22887.2" /translation="MDSNTTTPSYQRKITNEEHKFNSENYMNSDQWQCGAGNTEKITK YFNFCWDKLAEMNMCCSIHDDCYGLARGRKKCDQSFFDCLKKSLEFKSSGMLCSGIWT NTAKASICFAGVMFYGESTTFSSCAYNHMICYMRLLPDRNPRNYEDCVDNLIVCLDES SEHLASENEECLTHVEITMKSISENSKISGIPTTREAVGPKHASGSSYSSQ" assembly_gap 340763..340852 /estimated_length=90 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(341991..342065,342111..342209,342261..342325, 342375..342826,342875..343056) /gene="CBG01747" /locus_tag="CBG_01747" /standard_name="CBG01747" /product="Protein CBG01747" /note="contains similarity to Pfam domain PF07039 SGF29 tudor-like domain contains similarity to Interpro domain IPR010750 (SGF29 tudor-like domain)" /note="Predicted" /db_xref="GOA:A8WQY0" /db_xref="InterPro:IPR010750" /db_xref="InterPro:IPR037802" /db_xref="UniProtKB/TrEMBL:A8WQY0" /protein_id="CAP22888.1" /translation="MPKQKNSVQAVEEMRKKTAEDLLKKLPDIKERQDIVNENLKRLQ EFRDNEPNPMGKGKTKHLAAVTSTHGAVTAQQIELKKILDELRRASEVDYRSQMEGDL SRRDLMELIKIRGELLPLWVNKSSGFPGEYVGAIAPHEGSKLNEGDAVAAFNDKTEIW ILADIMSCNSNSRYECKDVDGESKKLAVFSRSHLIPLPKWKANPDSDKHALFAKNAIV LALYPQTTCFYKGIVHSPPSDFREPYQVAFEDDSYNSGYCPPMPVAQKYVVAFKEVAG ITASTAPKKGNKKK" CDS complement(join(343168..343685,343732..343878, 343927..344154,344199..344352)) /gene="CBG01746" /locus_tag="CBG_01746" /standard_name="CBG01746" /product="Protein CBG01746" /note="contains similarity to Pfam domain PF06239 Evolutionarily conserved signalling intermediate in Toll pathway contains similarity to Interpro domain IPR010418 (ECSIT)" /note="Predicted" /db_xref="InterPro:IPR010418" /db_xref="InterPro:IPR029342" /db_xref="UniProtKB/TrEMBL:A8WQY1" /protein_id="CAP22889.2" /translation="MVLAQLSKRIITAQIRSLTNTSQEAGLVHVEKQFEAVVPEKRDK DAFMAAIATFKEKRGRTHVEFINTALKYVKDYRVHKDLDTYKSLLDVFPKGKMIPQTA FQKVFLHYPQQQNCAVKVLDEMEWHGVQPDKEIHDIVVNAFGEWNFATKKVKRMLYWM PKLKHSNKYLDRRHLEGKSLSPSELAGIALKMMSRDPATSISLLKLSDNSDPVDKWFA TSQSPSQQLLLSELQKGEEVFVDGGNVYVQDKLIPFVTLTGTTKLSPLNEFKKEELDE NYSNWFEEWKKERHEAKRSIHQQDHETVFAMGAMFQNDNATALRWMDQLQKRNPNLEN LRIRVRLDGKSWLS" assembly_gap 344700..344825 /estimated_length=126 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(345406..345612,345662..345997) /gene="Cbr-rpl-20" /locus_tag="CBG_01745" /standard_name="CBG01745" /product="Protein CBR-RPL-20" /note="C. briggsae CBR-RPL-20 protein; contains similarity to Pfam domain PF01775 Ribosomal L18ae/LX protein domain contains similarity to Interpro domains IPR021138 (Ribosomal protein L18a), IPR023573 (Ribosomal protein L18a/LX)" /note="Predicted" /db_xref="GOA:A8WQY2" /db_xref="InterPro:IPR021138" /db_xref="InterPro:IPR023573" /db_xref="InterPro:IPR028877" /db_xref="UniProtKB/TrEMBL:A8WQY2" /protein_id="CAP22890.1" /translation="MPTKALGETLNEYVVVGRKIPTEKEPVTPIWKMQIFATNHVIAK SRFWYFVSMLRRVKKANGEILSIKQVFEKNPGTVKNYGVWLKYDSRTGHHNMYREYRD TTVAGAVTQCYRDMGARHRAQADRIHILKVQTIKAEDTKRAGIKMFHDSKIRFPLPHR VTKRKNLNVFTTARQNTHFA" CDS join(346957..347136,347182..347340) /gene="Cbr-cyc-2.1" /locus_tag="CBG_01744" /standard_name="CBG01744" /product="Protein CBR-CYC-2.1" /note="C. briggsae CBR-CYC-2.1 protein; contains similarity to Pfam domain PF00034 Cytochrome c contains similarity to Interpro domains IPR003088 (Cytochrome c, class I), IPR002327 (Cytochrome c, class IA/ IB)" /note="Predicted" /db_xref="GOA:A8WQY3" /db_xref="InterPro:IPR002327" /db_xref="InterPro:IPR009056" /db_xref="InterPro:IPR036909" /db_xref="UniProtKB/Swiss-Prot:A8WQY3" /protein_id="CAP22891.1" /translation="MADIPAGDYEKGKKVYKQRCLQCHVVDSTATKTGPTLYGVIGRT SGTVAGFDYSAANKSKGVVWTRETLFEYLLNPKKYIPGTKMVFAGLKKADERADLIKY IEVECSKPLA" CDS join(347591..347732,347775..347881,347930..348470, 348516..348763,348783..348905) /gene="Cbr-tctn-1" /locus_tag="CBG_01743" /standard_name="CBG01743" /product="Protein CBR-TCTN-1" /note="C. briggsae CBR-TCTN-1 protein; contains similarity to Pfam domain PF07773 Protein of unknown function (DUF1619) contains similarity to Interpro domain IPR011677 (Domain of unknown function DUF1619)" /note="Predicted" /db_xref="GOA:A8WQY4" /db_xref="InterPro:IPR011677" /db_xref="InterPro:IPR040354" /db_xref="UniProtKB/TrEMBL:A8WQY4" /protein_id="CAP22892.2" /translation="MKTTVYAFLFALSYAADIPEVCYPSVVRHRIDSVFPTSRLFCVT KLNDELEYGGVEIVSDGEQWSLFSKSRMLEEEETSSDDNGDSLYFGNSSGIRLFKLPA AISDSDFCTGTQNVEIEKNLTVHCKPLSTYDMLSQCTENSFINALSLFGNGEFVDKSE NKTLAIPRIAAEQMRAPVWNGSACNDVLVSANIVFRMNQTEVNDVVVQVEYGNLPGNV DTNWFQQDFSIFWIRMIQSNEDEKETNKSSSGAGYKAGDQIYRMQGSSPVPFAIPTLE ECYSSSVKPSPVLFLRPMISVCTIRTTNCEDARSKAKAFYEQVYPSELVSSISEDEHS AAVERVNVTWEDIFLSTFPYSYHLLLHHAAYPYPHFFKFITQNRALQKIIEK" CDS join(349824..349849,349907..350018,350066..350251, 350297..350407,350456..350566) /gene="CBG01742" /locus_tag="CBG_01742" /standard_name="CBG01742" /product="Protein CBG01742" /note="contains similarity to Pfam domain PF02466 Tim17/Tim22/Tim23/Pmp24 family contains similarity to Interpro domains IPR005678 (Mitochondrial inner membrane translocase complex, subunit Tim17), IPR003397 (Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24)" /note="Predicted" /db_xref="GOA:A8WQY5" /db_xref="InterPro:IPR005678" /db_xref="UniProtKB/TrEMBL:A8WQY5" /protein_id="CAP22893.1" /translation="MEEYTREPCPYRIGDDIGSAFAMGLVGGSIFQAFGGYKNAAKGK KMVGMMREIRMRSTLTGVQFAAWGGMFSTIDCCLVAIRKKEDPINSIVSGGLTGALLA IRSGPKVMAGSAILGSVILAMIEGVGLVTTRWMGAMMDPTQPPPEALDDPRSLGQKSQ AEPGLDQSRPFGIPTGLPNLS" CDS join(350995..351035,351187..351309,351356..352220, 352266..352405,352452..353439,353483..353706, 353754..353871) /gene="Cbr-hoe-1" /locus_tag="CBG_01741" /standard_name="CBG01741" /product="Protein CBR-HOE-1" /note="C. briggsae CBR-HOE-1 protein; contains similarity to Pfam domains PF12706 (Beta-lactamase superfamily domain) , PF00753 (Metallo-beta-lactamase superfamily) contains similarity to Interpro domain IPR001279 (Beta-lactamase-like)" /note="Predicted" /db_xref="GOA:A8WQY6" /db_xref="InterPro:IPR001279" /db_xref="InterPro:IPR036866" /db_xref="UniProtKB/TrEMBL:A8WQY6" /protein_id="CAP22894.2" /translation="MRRAALKSFANRILIPRNSVSTTARTFNEDLLESIKERIARNRR ILQKHSSSHLKAREVNASISNLRQSMASVQKKQKAAHEPPSNSIVNIPSQVSIEVLGN GTGLLHACFILRTPLKTYMFNCPENACRFLWQLRVRSSSVVDLFLTSASWDNIAGISS ILLSKEANAMPTRLHGAMNIKHFLECIRPFQDSDYGSCKYPSQVEERPYTMGNYEDAG LKVTYIPLSPPLDMTSRTSNKNKVNNVDVAFLIEMKEAARRIDVTKLLELKVPKGPLI GKLKSGEAVTLPDGRTIQPDQVFSSHKVEGEKPFLLVAECTTEQHVQSLLDSSSMQQF FNKGKQLDYMVHLSRESVINTESYKKLMEKLSDAGTSHLLINEVNPVIPAVESVYKHT RLLRTISPSLFPPLHPINWNGIITQNSELAEKQDQFIRVAPLQRYWMRRGNSQNEEPI INNLLASDPEISVKAKELIAEYRKLEDSVENNCEFPKLTFFGTSSAVPSKYRNVTGYL VEGSDESAILLDVGEGTYGQMKAIFGEVGCKKLLTNLHCVLITHAHQDHMNGLYTIVD RRKEAFESLGIPYRPLVLVCNRNVLKPLKTYSICFENIQSLLEIVDISRHPLTPPSSP NGPPGKRPKLPSPHLPPCRDILGDMPSIFDKKKWNLDELKAVQVHHTRMANGFVMRVA GKRIVFSGDTKPCDLLVEEGQGADILVHESTFEDGHENDAMRKRHSTMGQAVDVGKRM NAKHIILTHFSARYPKVPVLPQYLDTDNIGIAMDMLRVRFDHLSLVPKLLPIYREVFV SELFELAIKKEQRNLKDKESLEKNEQRKAVKQSS" CDS join(354830..354960,355007..355080,355124..355220, 355266..355365,355378..356055,356101..356248, 356295..356682,356726..356858,356907..357071) /gene="CBG01740" /locus_tag="CBG_01740" /standard_name="CBG01740" /product="Protein CBG01740" /note="contains similarity to Pfam domains PF08356 (EF hand associated) , PF08355 (EF hand associated) , PF00071 (Ras family) , PF08477 (Miro-like protein) (2)contains similarity to Interpro domains IPR013566 (EF hand associated, type-1), IPR013684 (Mitochondrial Rho-like), IPR003578 (Small GTPase superfamily, Rho type), IPR001806 (Small GTPase superfamily), IPR003579 (Small GTPase superfamily, Rab type), IPR018247 (EF-Hand 1, calcium-binding site), IPR013567 (EF hand associated, type-2), IPR020849 (Small GTPase superfamily, Ras type), IPR021181 (Small GTPase superfamily, mitochondrial rho type)" /note="Predicted" /db_xref="GOA:Q623S8" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR013566" /db_xref="InterPro:IPR013567" /db_xref="InterPro:IPR018247" /db_xref="InterPro:IPR020860" /db_xref="InterPro:IPR021181" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/Swiss-Prot:Q623S8" /protein_id="CAP22895.3" /translation="MSDGETLADVRIVLIGDEGCGKTSLVMSLLEDEWVDAVPRRLDR VLIPADVTPENVTTSIVDLSIKEEEDNWLISEMRQANVICVVYSVTDDTTVERIQEKW LPLIRQAFGEYHETPIILVGNKSDGTANNTDKLPSGQSLVSSLQILPIMEANTEVETC VECSARTMKNVSEIFYYAQKAVIYPTRPLYDADTKQLTDRAKKALIRVFKICDRDNDG YLSDTELNDFQKLCFGIPLTSTALEDVKRAVADGCPDGVASDALMLAGFLYLHLLFIE RGRHETTWAVLRKFGYETSLKLAEEYLYPRITIPVGCSTELSPEGVQFVSALFEKYDE DKDGCLSPSELQNLFSVCSAPVITKDNILALETNQRGWLTYNGYMAYWNMTTLINLTQ TFEQLAYLGFPVGRSGPGRAGNTLDSIRVTRERKKDLENHGTDRKVFQCLVVGAKDAG KTVFMQSLAGRGMSDVAQIGRRHSPFVINRVKVKEESKYLLLREVDVLSPQDALGSGE TSADVVAFLYDVSNPDSFAFCATVYQKYFYRTKTPCVMIATKVEREEVDQRWEIPPEE FCKQFELPKPIKFSSSNIGQSNSPIFEQLAMMAVYPHLRRVFYLSDSNLLSKITFGAA IVALAGFLVLKNL" CDS join(357919..357974,358018..358119,358163..358335, 358385..358521,358698..359384,359430..359642) /gene="Cbr-yars-1" /locus_tag="CBG_26433" /standard_name="CBG26433" /product="Protein CBR-YARS-1" /note="C. briggsae CBR-YARS-1 protein; contains similarity to Pfam domain PF00579 tRNA synthetases class I (W and Y) contains similarity to Interpro domains IPR002307 (Tyrosyl-tRNA synthetase), IPR002305 (Aminoacyl-tRNA synthetase, class Ic), IPR001412 (Aminoacyl-tRNA synthetase, class I, conserved site), IPR024088 (Tyrosyl-tRNA synthetase, bacterial-type)" /note="Predicted" /db_xref="GOA:B6IEX0" /db_xref="InterPro:IPR001412" /db_xref="InterPro:IPR002305" /db_xref="InterPro:IPR002307" /db_xref="InterPro:IPR014729" /db_xref="InterPro:IPR024088" /db_xref="UniProtKB/TrEMBL:B6IEX0" /protein_id="CAR98450.1" /translation="MFLSKWMGDAAIKTVRSPRANPFLDYIKDLDKRKPLKHSYPADL LTKFDYELKQIQPYLYAGFDPTAESLHVGNLLILLNLIRSQQFGLRPIALIGEFTASI GDPSGKKSERDLLPSDVIVSNAQSVTEQVRRIFANASSDTEPPIIVNNNDWLEKAALR DFFRECKSMQLGKMLRMKTIKNRLEKGLSYTEFSYQTMQAYDWYTLSEKFGCRFQLGG YDQLGHLDFGAHYIKKRCNQSQGTDNGFAAGVCFPILTDSAGNKLGKSEGGGALWLDP KKTSPFHLYQFFAQLHDDKAEELLLLLSLRNFEDLESSLVKHRKNLGKWIVQTELAME ITKVVHGEEGLDTALRCTKAMFGSKKADLTGLSKEEVLQMFRTTVDLKKEEVISMGKL ADLTRFGSGKGHLLMKNGAFSVNGAKKVDPTESINSLLSVLPELEDLTLIRWGKRDYQ LVRWI" CDS join(360169..360280,360327..360787,360836..361351, 361396..361479) /gene="Cbr-cif-1" /locus_tag="CBG_01738" /standard_name="CBG01738" /product="Protein CBR-CIF-1" /note="C. briggsae CBR-CIF-1 protein; contains similarity to Pfam domain PF01399 PCI domain contains similarity to Interpro domain IPR000717 (Proteasome component (PCI) domain)" /note="Predicted" /db_xref="GOA:A8WQY8" /db_xref="InterPro:IPR000717" /db_xref="InterPro:IPR027528" /db_xref="UniProtKB/Swiss-Prot:A8WQY8" /protein_id="CAP22896.1" /translation="MADTRELPVFAYIDDIKQLQELRQYLNKHESVKLDPTGPAETAK NLVEICSTLHVLPLWSQDVDLVLNSISSLIVVVPGEKCEPVVDAFIKNVSPKFYKGIG WGSHAGIAVRVLSNLYKGYSNFHTVQEKIFMALVDMCAEARLIGELECNLETLHDRFN TWQTPVEGQREILRAVHRALLVDQRADQAAKVMTALLGTYTEKDAATARDDAMECVRT AVVDPKSFSFDHLERLSAVKALKSSDPLMFTALELFISGTLKDYQQFVAKNPKFVTDY LKVDEVILLKKIRLLTLMSLAEEKNEIKLDELAKQLDIHADETLEEFVIDAIQVNAIS GKINEMANTLIVSSYQHRRFGSDQWVLLEKRLKVLIANLKQTHNNVHEVNQRIEAL" CDS join(362948..363058,363104..363342,363414..365007, 365058..365201,365248..365586,365635..366081, 366129..366338) /gene="Cbr-ogdh-1" /locus_tag="CBG_01737" /standard_name="CBG01737" /product="Protein CBR-OGDH-1" /note="C. briggsae CBR-OGDH-1 protein; contains similarity to Pfam domains PF02779 (Transketolase, pyrimidine binding domain) , PF00676 (Dehydrogenase E1 component) contains similarity to Interpro domains IPR011603 (2-oxoglutarate dehydrogenase, E1 component), IPR005475 (Transketolase-like, pyrimidine-binding domain), IPR001017 (Dehydrogenase, E1 component)" /note="Predicted" /db_xref="GOA:Q623T0" /db_xref="InterPro:IPR001017" /db_xref="InterPro:IPR005475" /db_xref="InterPro:IPR011603" /db_xref="InterPro:IPR029061" /db_xref="InterPro:IPR031717" /db_xref="InterPro:IPR032106" /db_xref="InterPro:IPR042179" /db_xref="UniProtKB/Swiss-Prot:Q623T0" /protein_id="CAP22897.1" /translation="MHRASLICRLASPSRINSIRSASSYGNNTISATPLVQQRKQSVA ASVKHEPFLNGSSSVYIEQMYETWLENPSSVHTSWDAYFRNVEAGAGPGQAFQAPPSV AYAGSMGVPSAPITSAAPATRLDTNASVQSISDHLKIQLLIRSYQTRGHNIADLDPLG INSADLDDTIPPELELSFYGLGERDLDREFLLPPTTFISEKKSLTLREILQRLKEIYC TSTGVEYMHLNNLEQQDWIRRRFEAPRVTELSHDQKKVLFKRLIRSTKFEEFLAKKWP SEKRFGLEGCEVLIPAIKQVIDSSSTLGVDSFVIGMPHRGRLNVLANVCRQPLATILS QFSTLEPADEGSGDVKYHLGVCIERLNRQSQKNVKIAVVANPSHLEAVDPVVMGKVRA EAFYAGDEKCDRTMAILLHGDAAFAGQGVVLETFNLDDLPSYTTHGAIHIVVNNQIGF TTDPRSSRSSPYCTDVGRVVGCPIFHVNVDDPEAVMHVCNVAADWRKTFKKDVIVDLV CYRRHGHNELDEPMFTQPLMYQRIKQTKTALEKYQEKILNEGVANEQYVKEELTKYGA ILEDAYENAQKVTYVRNRDWLDSPWDDFFKKRDPLKLPSTGIEQENIEHIIGKFGSYP EGFNLHRGLERTLKGRQQMLKDNSLDWACGEALAFGSLLKEGIHVRLSGQDVERGTFS HRHHVLHDQKVDQKIYNPLNDLADPQGEYTVCNSSLSEYAVLGFELGYSMVDPNSLVI WEAQFGDFSNTAQCIIDQFVSSGQSKWIRQSGLVMLLPHGYEGMGPEHSSARPERFLQ MCNEDDEIDLDKIAFGGTFEAQQLHDTNWIVANCTTPANIYHLLRRQVTMPFRKPAVV FSPKSLLRHPMARSPVEDFQSGSNFQRIIPETGAPSQNPPNVQRLVFCTGKVYYDMVA ARKHVGKENDVALVRVEQLSPFPYDLVQQECRKYQGAEIIWAQEEHKNMGAWSFVQPR INSLLSIDGRATKYAGRLPSSSPATGNKYTHMQEQKEMMSKVFGVPKSKLEGFKA" CDS complement(join(366648..366921,366968..367216, 367260..367476,367841..367970,368016..368387, 368540..368563)) /gene="CBG01736" /locus_tag="CBG_01736" /standard_name="CBG01736" /product="Protein CBG01736" /note="contains similarity to Interpro domain IPR000400 (Glycoside hydrolase, family 46)" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WQZ0" /protein_id="CAP22898.2" /translation="MGTSKCTSIIPVYFWPGERMDLPCRMCQMSYLTNGRMKRWGYSE HIDEFLLNPTQFVRIRELWQDVENTKSFNDNKEDPMDPDDVIWYPHKFISKKYVSEFR TENYEKERYEVRHKEHPRFWQDDGKLTIFGADVRSQGVYFCYDESSKKETIIFYVLMT MLPPVRFTTEYPLDYTDHCGQKKGKDSKLIFPSHNWKFHFLPMGDFNPAPTCQLDETD LETCKNNYPYLDNTKWPKNFGDDCSVDRCRARLFSPDNNIDLFIELRWDSWTSCQGDQ PTKRREGHCYLVREEGSINIETMKSEHKKLYSWIKNLETVFDRKPFDESGIRLHSSLL TSAIFNKPKLTGCYNKKDEEEKLYELYDQVWRKVFLPTLGVPEDGVVVQLGNPFEACL RYTRLATEPDDDPKSEHLVGTYSTQVDYC" CDS join(368984..369365,369414..369578,369626..369798) /gene="CBG01735" /locus_tag="CBG_01735" /standard_name="CBG01735" /product="Protein CBG01735" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WQZ1" /protein_id="CAP22899.1" /translation="MATPNSKNNQQDVTDGSSTIPTGSSFLNSGSGSSSSPFATSSTI STDRNSSFDSLSSPLKSIKTPRRRRSPSSESHSDLSCCSKTSSDVSSKKKKRSFSKKI KKSPKKATERPIGQISMIKQPVKDEVRGFISKYSVEPEFEAFSLTVDGIPFVAVSLMN ADKDLLDMLNVPPPTPMKKHTPGVNNPRKRLQSLRPRSSSANSKHVSFADEGSSAKKS KKSLSNEDFWELGEQVSVSPQ" CDS complement(join(372998..373382,373433..373563, 373735..373849,373900..374096,374147..374264, 374889..375157)) /gene="Cbr-bus-4" /locus_tag="CBG_01734" /standard_name="CBG01734" /product="Protein CBR-BUS-4" /note="C. briggsae CBR-BUS-4 protein; contains similarity to Pfam domains PF02434 (Fringe-like) , PF01762 (Galactosyltransferase) contains similarity to Interpro domains IPR002659 (Glycosyl transferase, family 31), IPR003378 (Fringe-like)" /note="Predicted" /db_xref="GOA:A8WQZ2" /db_xref="InterPro:IPR003378" /db_xref="UniProtKB/TrEMBL:A8WQZ2" /protein_id="CAP22900.2" /translation="MKIGKFSFSNESEEDQKDPPSLISSTTTPNIFQKNIRNLRSVGF CADEYRFSFIIVFAIFFFGAYFLYQVQYKTGIDIIPLFPIDDSGFDKYNEHLLGSVKV SESAKNQPKSGSLLCWAMTTSVYHKTRVPAITETWLRRCDAGHLFTNSDRFLNASTPY HTVFDGLPESYYKLFWKTRLALLYIYKHVSKDFDWYFKGDDDTYLIVENLQRYLATLD PNKPYFIGYRLSRRTETGYNAGGSGYVMSREAMRIFAEKLFNDKEKCPYHEWEDYAIA QCLASVGIVPLDSRDEKGRQRFLPWRPEQHFYADLTRSFQMDPIQIWVTNFYLFFLKT RISAPFQGPAIYHENLISMHHLYPDEIRLIDGLLYSIARGIWRQGDLEDIRNETTTVS TSMDDTLPPPTI" CDS complement(join(377415..377492,377542..377865, 377913..378205,378454..378573,378622..378706)) /gene="CBG01733" /locus_tag="CBG_01733" /standard_name="CBG01733" /product="Protein CBG01733" /note="contains similarity to Interpro domains IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8WQZ3" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR011009" /db_xref="UniProtKB/TrEMBL:A8WQZ3" /protein_id="CAP22901.2" /translation="MGKFGPIYRAMFNSYNGSVHDVNVYLLKNVSRLPDEQLVKLTSL LKSNIAAGAHQNVVSLCGLSTVGSDVMLMWEPLHQSVLRGVLRESRCARFGTEPFNMA SFLSSERLAAIAIGCCNGVEHLLKKNVFPTHLSTSNVLLAERGIVKIGGFGLAEHHAL DMTTESAPTKLRWMPPEYFKKDQKLIYNEQTMIWPLGVTLWEIFSLGGTPFTSLRQAQ TFIDAMRDGSAQLETISYCGEAVTQLLSTCTSHIPEARGDIRTIIKRLECISADAKTQ INLCYREDFPYLPIITPLEQQDE" CDS complement(join(379312..379410,379738..380637, 380685..380834,380881..381020,381377..381690, 381742..381788)) /gene="CBG01732" /locus_tag="CBG_01732" /standard_name="CBG01732" /product="Protein CBG01732" /note="Predicted" /db_xref="GOA:A8WQZ4" /db_xref="UniProtKB/TrEMBL:A8WQZ4" /protein_id="CAP22902.1" /translation="MGFKLVALSSWLLTVSTLSIEHNAVGGGCIDLLCPDTASLHGLR NLVNEDTLKTDACTDCKQCTENGYSVCLRPKDSRASRTSGGCSCSHTLAANCHTDLTQ TQHPANLSMKSYSACYADALQRPPQPLAVNENSSVVVTIEPFWLEPYWRHLKIENVTL HYKFQVKAPEHCEHEVESTEDGVHTCVASVLVDLSESKEDQEPKGAKDEEDDYDHSDN YDQYDDDLPPEVQFDRDVFAGAKELESYYTATIRRTRQIKASASKNQQIYDGETLIES EHLKFDLKPELYGNGEAEIVDEPSHDSVPDATEESATVVQEDKDEGDVSNETGGTNFF EEEEKKEEETKKKDGSEEEDGVLKVNLEDVEPTKLKSQEDGKKKKEEDGDDEEKEEDE EVESTTDKDDKNSGEAEKNDEGEEEKKDEQKEEDEEEKKDDEEETTEEGTTVAGEDSG ESNEDDSEESTTVELIEGETDPSEQNFWQRFVNSEDFPRCRNIFIVCVIGFIIFCAVA LGCLKCCCKSKESKTSNGYHYTSANQPPTELVSREKEHLRQ" CDS complement(join(388539..388629,388683..388769, 390020..390097,390140..390270,391093..391179)) /gene="CBG01729" /locus_tag="CBG_01729" /standard_name="CBG01729" /product="Protein CBG01729" /note="Predicted" /db_xref="GOA:A8WQZ5" /db_xref="UniProtKB/TrEMBL:A8WQZ5" /protein_id="CAP22903.2" /translation="MKPHLCDQPMNLTRRACCQLVLFLNDTERKPPIYLVEPIEESED HLTFFIGIFMLMIIALAFSIGLSKMTKPKVSISRYNNSNSSYDILMWLSSNPTNRSSM LLLLRSMCRTPATPDSSVSVVSSNIPLLPSYQRASQSTSANTPPPPYSATSSLVA" CDS complement(join(392707..392842,392896..393086, 393566..393694,393745..393925,393970..394022)) /gene="CBG01728" /locus_tag="CBG_01728" /standard_name="CBG01728" /product="Protein CBG01728" /note="contains similarity to Pfam domains PF12847 (Methyltransferase domain) , PF03291 (mRNA capping enzyme) , PF07021 (Methionine biosynthesis protein MetW) , PF08242 (Methyltransferase domain) , PF08241 (Methyltransferase domain) contains similarity to Interpro domains IPR004971 (mRNA capping enzyme, large subunit), IPR010743 (Methionine biosynthesis MetW), IPR013217 (Methyltransferase type 12), IPR013216 (Methyltransferase type 11)" /note="Predicted" /db_xref="GOA:A8WQZ6" /db_xref="InterPro:IPR025714" /db_xref="InterPro:IPR026635" /db_xref="InterPro:IPR029063" /db_xref="UniProtKB/TrEMBL:A8WQZ6" /protein_id="CAP22904.1" /translation="MSEKNVDIAPSQLGTKDFWDNRYEMELANFEEHGDEGEIWFGTA AENRIIKYLIDSKTAKNSEILDLGCGNGSVLRKLRSKRFSRLTGVDYCQKAVDLSNAA SKAEKEEDNEEGMIDIEFEQLDITAPRPDFLSLQFDVVLDKGTWDAMSLSEERGDRLK AYTDLLDKVLNKNGRFVVFSCNFTLNELQEQFGGSILEMVCEVPATHSFSFGGKQGVT STGVVFRKKAS" CDS complement(join(394344..394396,394443..395168, 395217..395589,395636..395867,395917..396412, 396498..396777,396823..396948)) /gene="Cbr-jmjd-1.2" /locus_tag="CBG_01727" /standard_name="CBG01727" /product="Protein CBR-JMJD-1.2" /note="C. briggsae CBR-JMJD-1.2 protein; contains similarity to Pfam domain PF02373 JmjC domain, hydroxylase contains similarity to Interpro domains IPR013129 (Transcription factor jumonji), IPR003347 (Transcription factor jumonji/aspartyl beta-hydroxylase), IPR019786 (Zinc finger, PHD-type, conserved site)" /note="Predicted" /db_xref="GOA:A8WQZ7" /db_xref="InterPro:IPR003347" /db_xref="InterPro:IPR011011" /db_xref="InterPro:IPR013083" /db_xref="InterPro:IPR019786" /db_xref="InterPro:IPR041070" /db_xref="UniProtKB/TrEMBL:A8WQZ7" /protein_id="CAP22905.2" /translation="MNEEQGKESLEVVKLEVRDDESIHVTDDVKPSVKKEEDEEYEEG SDSGSEDERCKKCGNNSTDDKIKAEKHEQKKTKLLMSKKKSHLNLPISDWISCENCQD WYHFACTSLEQWEYHIYEHWHCDTCTPLVGPSKRFEKHHHSDIVGTTSMRRTNQWKLV PRHGLINYELGSAIFQLRKNIRKIGSFAKIFFFRTDHEVCIVENGHDFKTKFHELGGP YKWSKVFLVKNPEGLDMKMPGPDFDLEDVVNIMSPDYEVDTIDVFNQNTYSMKLSTFL EKFRDKSPRFLLYNFLSLEFSDNETMKNLAKPPKYVQDISIVGKLWPDTSSDAYNELL SSGLFLPEDNRPKVEQFCLAGMAHSYTDFHVDFGGSSVYYHIFKGQKIFYIAEPTEAN LAAYEAHETSHSSSEWFGDKIKGQVKRVVINQGETLLIPAGWIHAVYTPVDSLVFGGN FLHLGNLKMQMRIYRLESSVRTAINSASKFYFPNFEYLHWMYMKNILIPKIKETVEEG SDMREVDAGLWKAAQYISKKLDEWYKRELQEGEGTAEKQEVDVSLEEKGKTLRTIERL IYAQVKKFERPGKATKRTCHEATEYDDDYRPNKVKKHPKLSKKNSVENISKKDKIKNG NDNIGDISVQSASSVPNGSLKLKVLLGPSEDQKNAIQMFNSTHSSSGRAVKINQAVTD LCGSHLESRVEEIPERPTKSFAELNDELERCEAIHSGEKVKKVKPPKVPKEPKEPKEK KDKPAKKATTVRDRLSKKLKL" CDS join(397608..397721,397798..397950) /gene="CBG01726" /locus_tag="CBG_01726" /standard_name="CBG01726" /product="Protein CBG01726" /note="Predicted" /db_xref="GOA:A8WQZ8" /db_xref="UniProtKB/TrEMBL:A8WQZ8" /protein_id="CAP22906.1" /translation="MMNRAILSLARNQQFIRRSLHKGVDSTPPLRFTSINEKVALYGF ICVAFLAYPTSVLFRLDDLRPRPDNALAPEVQEEIDARAAARRK" CDS join(398213..398259,398311..398500) /gene="Cbr-mrps-21" /locus_tag="CBG_01725" /standard_name="CBG01725" /product="Protein CBR-MRPS-21" /note="C. briggsae CBR-MRPS-21 protein; contains similarity to Interpro domain IPR001911 (Ribosomal protein S21)" /note="Predicted" /db_xref="GOA:A8WQZ9" /db_xref="InterPro:IPR001911" /db_xref="UniProtKB/TrEMBL:A8WQZ9" /protein_id="CAP22907.1" /translation="MVQNNDVDGAFGLLNRLMDSEGMLKIIRRTQFYQKPYMQRKALS MEASTAIFNEDMNRKMKFLVRKNRPDKHPGQVTS" CDS complement(join(398621..398728,398782..398859, 399120..399212,399261..399368)) /gene="CBG26434" /locus_tag="CBG_26434" /standard_name="CBG26434" /product="Protein CBG26434" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEX1" /protein_id="CAR98451.1" /translation="MLFMIQLTLLMVLSVMFLLCGTNSQTKQATTNNKSKISVAKTKK SKKKSKKVKEEGETSQKSYPAFVMPTKSEMKRIKSAEGKKKGTKDGFYQEKSDEDDTL EKVESLHLEMSDKTRRAAKKKAKKNV" CDS join(401108..401378,401426..401599,401641..402194) /gene="Cbr-col-111" /locus_tag="CBG_01723" /standard_name="CBG01723" /product="Protein CBR-COL-111" /note="C. briggsae CBR-COL-111 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain) , PF01391 (Collagen triple helix repeat (20 copies)) (3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WR00" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/TrEMBL:A8WR00" /protein_id="CAP22908.1" /translation="MTVDSAAIATWTSVLVSVLCIAFCAFFATSVCDDINQFLDNSMI SFKEGQGKTDDAWNEVVYLNDKRFKSELVSNSASVRQKRSDLPAHCNCLTQNQCPPGP PGPPGPAGMDGKPGEHGAPGPHGMSGSELVKIMRNDDSCIKVLLDVTPGPRGLPGAIG EPGPKGRDGMPGRQGNMGRPGPPGPAGDPGAPGSKGTPGAHGRQGMPGVRYSLGEPGP AGFPGPRGAPGKAGPPGVAEEGPDGLPGPAGPPGKPGMPGPMGTPGQPGEAGIPGADA AYCPCPKREALVESSVISQEAPETGYGDGGEKSKREKVEETQQQEETYDIFKFGQV" CDS complement(join(402323..402557,402605..403131, 403174..403326,403378..403498,403545..403702)) /gene="Cbr-psr-1" /locus_tag="CBG_01722" /standard_name="CBG01722" /product="Protein CBR-PSR-1" /note="C. briggsae CBR-PSR-1 protein; contains similarity to Pfam domain PF02373 JmjC domain, hydroxylase contains similarity to Interpro domains IPR013129 (Transcription factor jumonji), IPR003347 (Transcription factor jumonji/aspartyl beta-hydroxylase)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:Q623U2" /db_xref="InterPro:IPR003347" /db_xref="InterPro:IPR041667" /db_xref="UniProtKB/Swiss-Prot:Q623U2" /protein_id="CAP22909.1" /translation="MSLGKDRYSLPRSYKRVSHAKEKARPELRKFGWDTLGYAESFNP PPLKDTIPRVDGKKISVDEFRRDFERPRIPVILTGLTDDWNAHEKWTLERLSKKYRNQ NFKCGEDDHGNSVRMKMKYYHDYMLNNRDDSPLYIFDSSFAERRKTKKLSEDYKVPKF FEDDLFHYADHKKRPPHRWFVMGPARSGTAIHIDPLGTSAWNSLLLGYKRWVLIPPNA PRDLVKPMAHEKGKHPDEGITWFQTVYKRVRSPAWPKEYAPIECRQGPGETMFVPSGW WHVVINEGLTVAVTHNYCSVENLHLVWPKTVRGRPKLSKHWHRKLAESRPEVLKIINS CTDTPPQSLNDSSSDSSSSSSSSDDSSDSETEEDSGRCGLGNRKRRNDVCTSECPEKI SNSMV" CDS complement(join(404001..404163,404208..404353, 404415..404480,404526..404606)) /gene="CBG01721" /locus_tag="CBG_01721" /standard_name="CBG01721" /product="Protein CBG01721" /note="contains similarity to Pfam domains PF02630 (SCO1/SenC) , PF00085 (Thioredoxin) , PF08534 (Redoxin) , PF00578 (AhpC/TSA family) contains similarity to Interpro domains IPR013740 (Redoxin), IPR003782 (Copper chaperone SCO1/SenC), IPR000866 (Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant), IPR013766 (Thioredoxin domain)" /note="Predicted" /db_xref="GOA:A8WR02" /db_xref="InterPro:IPR012336" /db_xref="InterPro:IPR013766" /db_xref="InterPro:IPR036249" /db_xref="UniProtKB/TrEMBL:A8WR02" /protein_id="CAP22910.2" /translation="MSEFMKGVMLLKQDLTEVPAEEALKGKVVALYFSAGWCPPCKQF TPKLVRFYHHLKKAGKPIEVVFFSRDRSKADLEENFTEKHGDWLCVKYGDDILTRYQS KFEIKTIPVLRVINPAGKMVVLDGKSEVVDKGKADPLGLFAAWQAACNK" CDS complement(join(405151..405229,405282..405435, 405486..405576,405621..405743,405795..405848)) /gene="Cbr-ubc-9" /locus_tag="CBG_01720" /standard_name="CBG01720" /product="Protein CBR-UBC-9" /note="C. briggsae CBR-UBC-9 protein; contains similarity to Pfam domain PF00179 Ubiquitin-conjugating enzyme contains similarity to Interpro domains IPR023313 (Ubiquitin-conjugating enzyme, active site), IPR000608 (Ubiquitin-conjugating enzyme, E2)" /note="Predicted" /db_xref="GOA:A8WR03" /db_xref="InterPro:IPR000608" /db_xref="InterPro:IPR016135" /db_xref="InterPro:IPR023313" /db_xref="UniProtKB/TrEMBL:A8WR03" /protein_id="CAP22911.1" /translation="MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECA IPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKD WKPSISIKQLLVGIQDLLNNPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAIKYSAEIV QKQMLE" CDS complement(join(406496..406559,406640..406753, 406801..406962,407006..407152,407201..407244)) /gene="CBG01719" /locus_tag="CBG_01719" /standard_name="CBG01719" /product="Protein CBG01719" /note="Predicted" /db_xref="GOA:A8WR04" /db_xref="UniProtKB/TrEMBL:A8WR04" /protein_id="CAP22912.1" /translation="MSSSNSDVYEFPEDNKIVQTNLADYTTELLDGNSSTTKSTISDD PPNQLFLTSLLSVGSAAFFLTLSASVVRFSPFLGSILSISIILIFREWNRIYGGLLTP RLKASINYSTVLKDNKEYIPFYDMDWLFGGKYKPYCYGCTGPAINPDMCRTPDDPDSR SPTKERNEGEKLMKNS" CDS complement(join(407477..407688,407749..407887, 407933..408095,408145..408285,408338..408463, 408511..408724,408805..408958)) /gene="CBG01718" /locus_tag="CBG_01718" /standard_name="CBG01718" /product="Protein CBG01718" /note="Predicted" /db_xref="GOA:A8WR05" /db_xref="UniProtKB/TrEMBL:A8WR05" /protein_id="CAP22913.1" /translation="MSEEILDFSGNGPEDVQTLLTNSEMDPGLLSNETTTTMMTEILS STTTTTMAPILIDYHPNPYRIGLLAFKCLLIILLFTLSCTIRRDFFKFFVLFLIIPLF IESGFDIFTEIHSSNAIYGAQQFDWDYFNLSPRENSTVTDWQKHAVESYGQILQKYTT YQVYTKDQLFSIVSYVAGDFIFWSLLFSTTTVFHYAHKAVVRPEQITYDPICSSFFKI QILPVLFTAINTLISLYEIPQWSYLFVLFILRINACVLSFVIFTQLFASLFLFCRRKD EVTKTSPYEHVRNSKLRLFLFVLFTILIHALTAPYLIWSGLTIASDVGHLLGFNWYLP MHFASETFPLHLTFFLVRPFAFAILALFLLNPYRRRFVKFFCPCCRRH" CDS join(417307..417586,423535..423695,424861..424968, 425123..425729,426460..426545) /gene="CBG01714" /locus_tag="CBG_01714" /standard_name="CBG01714" /product="Protein CBG01714" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR06" /protein_id="CAP22914.1" /translation="MEFKVSSSTSTRCSSPPWFHHLTAHRPIPLHHRSHSASTPTTTS SITLSPSLSQLPPHQPHHSHFNHHHWHKTMTSALEKCTTSLSEIHRLLRESSTSSYGT MSTTSSIESSPIEQATSRSARRKWHSAMRFIQGVQRFKTPVMSHKHLVVDEEAQREKT RIRRRRRRYTKRRRREDMKMRWVPRLPGGHEATPQLREHTPSLTMCSRRGRRLSLPQT PMATPANPTTPGVMNGHPFASRPHYERRQLPSMQHTLRHNHSMGSLMGNREVPPREIH PESYHNPHARFSQPDIHSAIYRPHNYYSPPISYGSSGGYYSHPYQYQSGQILPTSQHS SPLYMRRMLPTPNKSSGGIARKLLKRCTNPDLMRLQRTTEIREQSVGRTSCDVRECKK VQFICFCIVSILNSLIWKIEE" assembly_gap 421007..421076 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(429782..429839,432798..432911,432961..433080, 433133..433265,433311..433434,434431..434535) /gene="CBG01713" /locus_tag="CBG_01713" /standard_name="CBG01713" /product="Protein CBG01713" /note="Predicted" /db_xref="GOA:A8WR07" /db_xref="InterPro:IPR036028" /db_xref="InterPro:IPR039688" /db_xref="UniProtKB/TrEMBL:A8WR07" /protein_id="CAP22915.1" /translation="MGSSKANPLLGSTPQLDNAGRSVGRRRAPKLTQQMKSLSLDCQD MPPRINQSTRSPMRSKLAPRDYRKPGINGSSDFSDVERSCSPIVKSRRSSSSALHAGG HIVIHEYTPSNGSPLVLGEKVHVVDNGDPDWLHGFRLSDRTEHMITFPATCVAQIMAG EQAMRIQQNVFVAEQKLRMYRDQIVFVQPDSLVEGKVTVRTEHNALASCPLSYLAMI" CDS join(435046..435210,435279..435399,435447..436026, 436076..436136) /gene="Cbr-col-110" /locus_tag="CBG_01712" /standard_name="CBG01712" /product="Protein CBR-COL-110" /note="C. briggsae CBR-COL-110 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain) , PF01391 (Collagen triple helix repeat (20 copies)) (2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /note="Predicted" /db_xref="GOA:A8WR08" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/TrEMBL:A8WR08" /protein_id="CAP22916.1" /translation="MTSCSQYSSHLRIQRFIAFSVASVAFVLLAGAMVTLPLAYRYVH QLRYSLERQFVECNDVVRTIHTSVDELSTMIANSNHTRSIRGTKPRRRFDEDDTVEGT CDGCCLPGSPGPAGPPGRHGRHGAPGAPGKPGNPGEPPRGPCDPAHPNPCDCPAGEPG EPGPRGPPGNNGLPGLKGRRGIDGLDGRPGRPGKTGIDGIPGPKGEDGSDGEPGIIDT SDVGPPGDDGEEGEAGEAGQPGNDGRDGKPGQVGPPGPPGRDGIDGENGNDGDLGEPG IQGRPGEEGICPKYCAIDGGVFFDSGSGRRKA" CDS complement(join(436317..436384,436619..436684, 436728..436815,436862..437058,437106..437263, 437305..437403,437629..437728,437786..437810)) /gene="CBG01711" /locus_tag="CBG_01711" /standard_name="CBG01711" /product="Protein CBG01711" /note="contains similarity to Pfam domain PF06879 contains similarity to Interpro domain IPR009673 (Protein of unknown function DUF1261)" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR09" /protein_id="CAP22917.1" /translation="MKFAILLAALCGVAVAQFGTDNCNQAQFLACNSKLGDFWRTDTT TAWKDLATLDRITQSLIVSPYTIDSWINVCNGFSAFYGCLGQAQIRNCLGTVGLVGSG LDLNTAYAYQGFIADWDFKCGVGFWTMYERKVLTTCVESTYVNYQKETAAALTSYQTA ITQDPANACKYAQTLMNAWQNTYMKGPCRTVNPAQAGWIGCQSAREYSNAQFRHCKHT TTCASPSSVDAVTRVNAETGKTEYETLPFYEIVNDKAVISQAASWISE" CDS complement(join(438139..438200,438773..439122, 439170..439272,439320..439425,439474..439569, 439618..439726,439769..440349,440839..441051)) /gene="CBG01710" /locus_tag="CBG_01710" /standard_name="CBG01710" /product="Protein CBG01710" /note="contains similarity to Pfam domain PF05577 Serine carboxypeptidase S28 contains similarity to Interpro domain IPR008758 (Peptidase S28)" /note="Predicted" /db_xref="GOA:A8WR10" /db_xref="InterPro:IPR008758" /db_xref="InterPro:IPR029058" /db_xref="InterPro:IPR042269" /db_xref="UniProtKB/TrEMBL:A8WR10" /protein_id="CAP22918.2" /translation="MPRVLLLLALAFGYALCHVSPPMVNGRPRGGLVGGDPDPEGPTT EDQYMVYSNITQYVDHFANNTSATWLQRYQYNSKFYNKTVGYVFLMLGGEGAIDPPGD KWVRHEGETMMVWAKEFGAAAFQVEHRFYGSKEFSPLGDQTTESLKLLTIDQALADIK EFINQMNKMYFPNDKPIWITFGGSYPGSLSAWFRETYPEMTAGAVSSSSAVHVFVDYY GYAINTEKTYRTVSAPCAEVIRTAFTEIQKKAYNGSDARALLKGTFNLCDDFDENNLS KSVQFFFQNIYGYFQGINQYTGDNRNTATRNGLGVPGACAILNNATIGEEVDRVVAVL NWYDSFSGPLTCRPNSYDGFVKQYSNTTMPDDDTISTRSWIWQTCTELGYYQTTDGGN KGIFGSIVPLDFFADQCIDLFGPEYTLDNTFKWIDQVRTKYGGADAYRGTNVCFPNGS FDPWQDLGHKMNVTNNNVDSWLIDGTAHCADMYPARDSDKQSLKDARQRIHDHLARWL SDAQAIRQHSSGSTNFSMFTIILLVIAKILC" CDS complement(join(441778..441906,442667..442769, 442826..442864,444073..444195,444496..444565, 444776..444951,445007..445077,445530..445587, 445703..446396,446441..447957,448005..448180, 448641..448734,449947..450140,450701..450802, 452240..452269)) /gene="CBG01709" /locus_tag="CBG_01709" /standard_name="CBG01709" /product="Protein CBG01709" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR11" /protein_id="CAP22919.2" /translation="MEQESGHQVKQQKAGTSTETTADLVIENRNVVDVLHRLDANSNN IVSTSSVPSSRKSKEKKAKMSSTPRSPLMSMANSVKSKLTKITHLGRSSESSSSSNIK TSQSFSGIRQPKQVPKRIDQNANRVIKSSSMEVPSTSKVCIPQDPTPLVDDKIEEISE AGLISRSEMAPPKPMEHVCVKLEEDVLVVTKEFDERYPGQKRSASPDPPAVEESQTMS ELDQIPSETVVETISEELDNNANQKTPGPVRRVIKETTTTTVTTTTFSESSPVPIIEK MEFVEKQESILVPKSHLDTAAIHVDVPAPVHIPEAVVSPKNERFVSPERYVLLVKTPE ALRKHRTLTIGEKDQNDVKPEEEIQYTKMETVKFKEIKEKVKYEEPVPKEKFILTVKT PEAIRRHHTFTIRDKSPEEEMKITKSQSDVHVSKKLVKQTSEPERKTLEKDLFKEKED VVPEPKFVIVMKTPECLRRHHTFTIGDRPKSPDYPYIEEGEITEPIATIGPPADRRKK EEEKEKKKKEWEEYEKPPPEKYILTTTTPLAIRKYQTFVVEAKEEKAIPQSMSADAVM MTKKGKVQRSESTDSKKHSYLRRLQFELFRGRSRERKTEKQEKRQKSLDERKPESTQK YILSTTTPIMMRKYQTFAIVDGKPKDGELANLQSIESSYQKQVQKDMSFEEEKTTSPA KTSDFYSITATTPLTKRKVVVEETVTSSVHQLSLDEAIGSPTKKPISPEPRHLFVMGG RRSTTPQEERKVEKLHEPPRNLKLDTDRSQSDNAELLEERKSTMSGDLTSPEEDIPMD TNLTPTTEDVMEAVIISRRIEGLMTSPIEEEPEGVTSSIRDLSIKSLEKKRNSDSERP APVFTPPSPPKDKPFPVMTVPKSTSTSSSDSAHPMTSSSSSSRIKPTQLPIKKTIQVV DPMHIVELKPEQKSKKEALASKSLRNAGKMLTPSFLRKEKKGPKKSLYPKTTSNGRQH ISEKLERKAPLAEGESSVVANSPLVENLPVTFEKWSNKSPRLSVKHFSETIIEEGLDA NANAMSPQLEHRAIPSSHQQDNAGLIDDDILDQPMLVGDTFSHSSSIDCISAHQRMNE SIISIDRSIAPNESRSSNQPTQNNVNRNTFNETNLDRQIDAGRSEVQDIKTQLQKLNR LVNEMGVSGWEEELTRLRCENEQLRRELAERDATIAALQSQTVSS" CDS join(454188..454418,454786..454884,456496..456537) /gene="CBG01708" /locus_tag="CBG_01708" /standard_name="CBG01708" /product="Protein CBG01708" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR12" /protein_id="CAP22920.2" /translation="MEIEDTSRKQRYLLKRWMKVMMNNGFRPRKPYPIFRNKSIIRSS SSGSYPYPRTHTTLMVIPSNRPPPPPQPVKMFTGVRRRPPLNRACPPIPESKSNESIM SHASRVSEWTFYIASTPTPTM" assembly_gap 455714..455782 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 457378..464295 /estimated_length=6918 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(464463..464670,464716..464994, 465042..465235,466214..466444)) /gene="CBG01707" /locus_tag="CBG_01707" /standard_name="CBG01707" /product="Protein CBG01707" /note="contains similarity to Interpro domain IPR007087 (Zinc finger, C2H2)" /note="Predicted" /db_xref="GOA:A8WR13" /db_xref="InterPro:IPR013087" /db_xref="UniProtKB/TrEMBL:A8WR13" /protein_id="CAP22921.2" /translation="MDIPPDTNDSGRSYGFASNLKRFGASLADHPKYSRREFISHLSD CRLQLKVEQREETPENQSEGSEDGIEECATQIEWENLECPKCHRKVENSDVLTEHLVS NHGKTQDKVWFKQFGTLGSDMAKSLDKALRKQEETSLVKKKFGDSNDLITCPVASPLA PFFMMRHFQVFRDEMCPSATEGIVVGITVPIQSVELLNLMLQNDEKSFSPIFCFQKLD KARRRIKRGLLRKTMEKKVKILEKRCDKVSVDEPDIVFKKSRTADETRDLLQALNLPP TGSQKDIVERINELKTRYEEIRLVRLF" assembly_gap 465767..465776 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(468017..468130,470287..470630,470678..470774, 470819..471042,471086..471214,471348..471540) /gene="CBG01706" /locus_tag="CBG_01706" /standard_name="CBG01706" /product="Protein CBG01706" /note="contains similarity to Pfam domain PF01545 Cation efflux family contains similarity to Interpro domain IPR002524 (Cation efflux protein)" /note="Predicted" /db_xref="GOA:A8WR14" /db_xref="InterPro:IPR002524" /db_xref="InterPro:IPR027469" /db_xref="InterPro:IPR027470" /db_xref="InterPro:IPR036837" /db_xref="UniProtKB/TrEMBL:A8WR14" /protein_id="CAP22922.2" /translation="MKNSETLPLITRKAPVKYYHNDNVSRFERRRREKSKKEYYSRLD HLNELYEEDDKLMEGVTQPEEVILEYRRYLNIGFQNEKSTDRILANLSIALNLTLLFT NLLASILSGSLSIVSTFVDSLMDVTSGLIIGICLKLIKNTNMFNYPRGRARLELVGVI ICSILMGIANTLLVVESIRSILSGNINPEMDIPTLSIMLGAAAVKIILCLVCYRRGSS SSIVLAMDMRNDIATTIVAIVCATIGDRYWPYADPLGAILVCGVIATSWYGHALEHVP HLVGKRAEGESLSRILKIVIEHDPRIKYVDHVMVYHTALEALAEVHIVLDENLPLRVT HDIAQGLEQKLMRLNFVERCFVHCDYECDGDK" CDS complement(join(471613..471822,472038..472183, 472228..472486,472707..472838,472883..473068, 473136..473270,473318..473494,473542..473713, 476753..476835)) /gene="CBG01705" /locus_tag="CBG_01705" /standard_name="CBG01705" /product="Protein CBG01705" /note="contains similarity to Pfam domain PF01769 Divalent cation transporter contains similarity to Interpro domain IPR006667 (MgtE magnesium transporter, integral membrane)" /note="Predicted" /db_xref="GOA:A8WR15" /db_xref="InterPro:IPR006667" /db_xref="InterPro:IPR036739" /db_xref="InterPro:IPR038048" /db_xref="UniProtKB/TrEMBL:A8WR15" /protein_id="CAP22923.2" /translation="MSNNHDDFEPIDGAEEIQIPQSTTIDHLIVEGNNNNNTGDTLSN VIVENWIFAPIAVTIQKMNVSKPTHVFNVAEKESKKQFMAEALIPFLFAGLGLILAGI MLESAEGSEFFSKLPDAVIMVPTLVGLKGNLEMTLSSRLSTLANLGFMETRKDKIKVA LSNMALIQCQAIAVSSLAVIPVLLVGEQPITFEDTLCLLLSAVVTASSASLILSLLMV AVVIAARHWKLNPDNISTPVAASLGDVSTLYILLSVGTLVCHMRDLHITLLIVILLFF YAIAIVGAVIAAEDRFTLEVLKNGWWPILCAMMITTFSGLVLKKSMQTYPPLAAFQPL INGLGGNLVAVQASRISTQLHRARKNREIEVRPLSHYINPWRAFFGKNEDASAAQILL GISIPSNILFIFIIFLFGVGFHNTFPFTISFVLVCAIQVTILLYICQILVRAMWIMRI DPDNSAIPFLTALGDLIGSLLLIFCFWSQWKYFGLPVSADQYTGHKFGH" CDS join(481848..481901,481950..482084,482136..482250, 482297..482440,482491..482594,483312..483420, 483476..483567,483615..483704) /gene="CBG01704" /locus_tag="CBG_01704" /standard_name="CBG01704" /product="Protein CBG01704" /note="contains similarity to Pfam domain PF10277 Frag1/DRAM/Sfk1 family contains similarity to Interpro domain IPR019402 (Frag1/DRAM/Sfk1)" /note="Predicted" /db_xref="GOA:A8WR16" /db_xref="InterPro:IPR019402" /db_xref="InterPro:IPR039545" /db_xref="UniProtKB/TrEMBL:A8WR16" /protein_id="CAP22924.1" /translation="MLLEKRFESVHKKKQGSFELFQLNTTLLFWVGFVPPLFAAIFAI LTAITLHQDKITNYSWICGRAFLPSLSRIINLTLEGLVWQLCILFHIPFRLLELSVGW VRYGRLESKSNKKRFWYKMHRHLYLVFGVTELFLLSGLSAIGEKEHGIWHICFFYSFG VVALLFFISNTVCHSQSLYFLNPYGRISYHVKIGISICYFLSAPAIATFYALYWKACF TWAYELFALVEYLDVFMVIFYHGCCVYWDIQHKVVFSVRLNVPPKKEIDEQEETGKEV TTEL" assembly_gap 482637..483030 /estimated_length=394 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(484003..484208,484262..484397,484448..484668, 484712..484882,484932..485070) /gene="CBG26435" /locus_tag="CBG_26435" /standard_name="CBG26435" /product="Protein CBG26435" /note="Predicted" /db_xref="GOA:B6IEX2" /db_xref="InterPro:IPR010313" /db_xref="InterPro:IPR016181" /db_xref="UniProtKB/TrEMBL:B6IEX2" /protein_id="CAR98452.1" /translation="MFCKLSSEKLNDFIPFFESKPKFALFANAAKFELEKRLPNHPCD FYYQESNDAKYFYVFRHDRIPDSCRPILMIGSDKTVNQNDVIYGLEQIKAMEPDLGNI ELLVAPSELSIAARKFFLDNSNCSEDYNVACNHFYLPEYVYPGIQKKVDEITLPESYS IGSTRVSDTEIVFSTWKFSTPDGILQIKEIIECLPTACILHKDKAVAFEMVGLHGQLN HQFTFPEYRNRGFGTMIENTIVSKCFKEGIQVLKAVEHSNIVVLEKSLNHKLWKVVKE DDGEIIVFNYTQYR" assembly_gap 485733..486560 /estimated_length=828 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(489227..489253,489971..490402,490461..490595, 490645..491238,491285..491410,491469..492089, 492151..492219,492268..492327,493044..493139) /gene="CBG01703" /locus_tag="CBG_01703" /standard_name="CBG01703" /product="Protein CBG01703" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR17" /protein_id="CAP22925.1" /translation="MKYISSLLLLSSLFGSAIGCLPGLGLGGGGGGCCSPAQPACGNP CGGGGAAPAPVYAAAPLAPAPFAAYPQAPAAPFHQGGYQPQQPQYGGANGGFQQPQQF QQVQGGYAGAHQGANYGSIQTGAVSAGGAYQAEPAQQVQPLPLLGQPVAYEKSVIVAP TQQQEQVLSTAQVLTKVMPASAVLDEHVAEPAVASPNNIVTSINTQTSYGDEHQTATE THNVQPQQQALHRPAASSSSSSSSSASSSAEHHPTHQVRVPSASTSIESNKQRVVPES VIVKEIVQSFETTTPYPKQVALQTVAPFVPQPAQPVQPQVSQPVVPHVPSVSHVPSVS APVATSAPFVPETFVEPVQPVQTIQPIQPGPIRPAPLQPAHNVQVSVPEATQAPTHSF IPETKVVAEEDRIEATGGSDYDQPSNVPSSNIPSNEQDTVNELLASLDSSSSTPASNL DFNQVTIEPNTNQQTETAHIQTDGDDYDSVPLNEDRKDVPTAEPTHNAAPSNPQPVAV VPEETAPIIPQQIQPIETYQPQGTSAPVAETTVGYVEPPKAHQPEIHLQPVAPAVRVE ATTTVPAPTIKFELPIEVHEVVTPQVPLQPEPAVIQTVTEKPIAEVTVEVLPTSAAPV SQFFENITSREENHDESAPTQPEPSVPAQTSNGADYDEKSVENKVSTETEVVPNLGEY GSKFAKVQGAETKQVSEPIQIETIENANPYGRKYWIF" CDS join(496722..496730,496792..496919,496973..498302, 498436..498612) /gene="CBG01702" /locus_tag="CBG_01702" /standard_name="CBG01702" /product="Protein CBG01702" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR18" /protein_id="CAP22926.1" /translation="MASFLLIALLATPALGCIGGLGGGGGCCQPSQPACANPCGGASA AAYAAPAAGYPRAPVGYAAPPPPPPPAFGGLGGASYPSAGAGAGGQYDTGIHGGAAQG GYAGAQGAQGGYAGAQGAQGGYAGAAQGAQGGYAGAAVQGGQGGYAGAVQGGQIASQG YAGAGAPVSAGGAYNQGPAAVNGGYTSQQQGGAVAPAGYEQGPAAVHVDATSVTSEGT VSQQGGSSAAGGYGEETGASSVAEQTNTVVQTGETAEEGYGAQGGSAPATGSEAEETE IVAVATSAPAPAPTYENVQPAPVAPTTNVEETHEETHVEEPHVEETHEEPAPAPVPVA TSAPVVEPVTEVTNEQEYEEEIVEPAEPQVVEPVPEPQVVEPAPQPHVEPVQPAPQVT EPQVVEPQVVVEQPQPAAPAPETFETSAPVAPQVTEYPVQQTEAPAVEEVYEEETDAP VAAPSQPSESSSFEEVTAEETAPQPPQPAPYVPPAPTFTEQKPGYEQTAPAVETKEES YDDEQPAEETHVEPEQPAAGGGYSATEAPAKPDGGYRTH" CDS join(500285..500330,500376..500495,500758..500823, 500867..501103,501148..501260) /gene="CBG01701" /locus_tag="CBG_01701" /standard_name="CBG01701" /product="Protein CBG01701" /note="contains similarity to Pfam domains PF00071 (Ras family) , PF09439 (Signal recognition particle receptor beta subunit) , PF04670 (Gtr1/RagA G protein conserved region) , PF08477 (Miro-like protein) , PF00503 (G-protein alpha subunit) contains similarity to Interpro domains IPR006687 (Small GTPase superfamily, SAR1-type), IPR013684 (Mitochondrial Rho-like), IPR005225 (Small GTP-binding protein domain), IPR001806 (Small GTPase superfamily), IPR001019 (Guanine nucleotide binding protein (G-protein), alpha subunit), IPR019009 (Signal recognition particle receptor, beta subunit), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR006762 (Gtr1/RagA G protein), IPR024156 (Small GTPase superfamily, ARF type)" /note="Predicted" /db_xref="GOA:A8WR19" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR006687" /db_xref="InterPro:IPR006689" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8WR19" /protein_id="CAP22927.1" /translation="MSFLWDWFSGVLNMLGLTNKKGKLVFLGLDNAGKTTLLHMLKDD RIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAE RMQESRAELESLLQDEQIASVPVLVLGNKIDKPGALSEDQLKWQLNIQHMCTGKGDVS RNEMASRPMEVFMCSVLQRQGYGEGIRWLGQYL" CDS join(502434..502478,502530..502615,502671..502934, 502982..503376,503425..503935,504028..504148, 504195..504344) /gene="CBG01700" /locus_tag="CBG_01700" /standard_name="CBG01700" /product="Protein CBG01700" /note="contains similarity to Pfam domain PF04506 Rft protein contains similarity to Interpro domain IPR007594 (RFT1)" /note="Predicted" /db_xref="GOA:A8WR20" /db_xref="InterPro:IPR007594" /db_xref="UniProtKB/TrEMBL:A8WR20" /protein_id="CAP22928.1" /translation="MTSLFSSLAHNLRGQLIARIVSFAINMYLLRRIDNDVLGLVNVR LTLLYSSILFLTREPLRKAEIIRGSLPKFINLLWLSPIISSMLSVICVYLWCTFSSTS EDVSWNVLLSFPISAIIESIAEPFSVLSLRLESTSGSLGQHFAIGQGMLICVKRIFVL AGLFIFPEMYHLDIFAYSQYFGAIAYLLFNFIAFYFYIRNKSIPELEKFTSFSDFLPK ASEGIDRDSMKAVFTMFSHSILKQLLTDGSAYVMTFTELLSLKHQAVYDAVERVGSII VRTILSPIDENCNAYFSNTIRKESSVFSKNTDNHDDLVENLSTILHVVGVIGFVACVF GVPYSSTAISLYGGKLLSDNGGALLLSLYSGYILVTAINGITEGFAMASMDNYQIYSH GKFLFVTSALHLFINYVLCVYMNSAGFIVANIINMTVRIIYNWKTIRQYLGDRAPSFT TVLPTFSTAMFLGASLFATSFSYLIFATTPGLSHNLSHIAIGAVCLVILAQHTIQHDP VFAAIIDSLAKKHRE" CDS join(504953..505036,505568..505729,506173..506262, 506813..506911,507147..507278,507981..508097, 508391..508521,508575..508698,508920..509102, 509150..509436,509482..509845,510687..510788, 510839..511063,511622..511738) /gene="CBG01699" /locus_tag="CBG_01699" /standard_name="CBG01699" /product="Protein CBG01699" /note="contains similarity to Pfam domains PF01094 (Receptor family ligand binding region) , PF00003 (7 transmembrane sweet-taste receptor of 3 GCPR) contains similarity to Interpro domains IPR000337 (GPCR, family 3), IPR002456 (GPCR, family 3, gamma-aminobutyric acid receptor, type B1), IPR002455 (GPCR, family 3, gamma-aminobutyric acid receptor, type B), IPR017978 (GPCR, family 3, C-terminal), IPR001828 (Extracellular ligand-binding receptor), IPR000923 (Blue (type 1) copper domain)" /note="Predicted" /db_xref="GOA:A8WR21" /db_xref="InterPro:IPR000337" /db_xref="InterPro:IPR001828" /db_xref="InterPro:IPR002455" /db_xref="InterPro:IPR002457" /db_xref="InterPro:IPR017978" /db_xref="InterPro:IPR028082" /db_xref="UniProtKB/TrEMBL:A8WR21" /protein_id="CAP22929.2" /translation="MIIQWLVSLLFAVGVVESYDAGEELSCKRRHGGIPLPLGVFTVQ KEGYPDALPAIRTALSHVHTRSCILQGYRLEMIVKDTHCKTSQGMKALFDLIASRPRP VAILGGQCTEVNEPIAMALKYWQIVQLSYAETHAKFASSDSHELFPTFFRVVPGSRNT NMAKCKFVNHFGWKRVGTVKQNDQPRYALPHEALTTRLEHGFGVKIVHTAGVNWEQIE TVGAELDELKERDVRIILVDVDEEMAATVLCAGYHRGMYGDNYVWILPGYHSDRWMNK TNDNCTNEEMKEAARNHFSVEFALSRRDVDTKIVGNTRAGDVWKEISDLDPNNTWRGY LYDGLWTLAIALSHSMGENAEFSHHKMIEAIDNSSFQGLTGKVKFANNERLGLVDIMQ WSEDHYVPFAMYDGAEDEFRIIDSETKGWSPPLDSTITERRREHISSLLFLAMSLLAL IGIFLALIFLLINFRYRNHRFIKMSSPNLNNIIIAGSICTFASVIMLGLDTRIVSPDV FVWLCYMKTWTLCLGFTLSFGAMFSKTWRVHSIFTNIRMDRKAIKDSKLFLILGVLLF IDICVLVTWAFISPFSYTVTELPHIPEDNIVIIPEVEKCYSSNSGVFQAVLYAVKGVL MILGCFLAWETRHVNVPALNDSKYIGTSVYCCVVMSVLGLSTSVILQERVNEMFSLAS FFVIFSTTLTLCLVFVPKVIELARNPVGNEPRAYRRGLMKSVVAKTSQPMSPQPRS" CDS complement(join(512102..512233,512656..512760, 512855..513001,514949..515416,515650..515652)) /gene="CBG01697" /locus_tag="CBG_01697" /standard_name="CBG01697" /product="Protein CBG01697" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR23" /protein_id="CAP22931.2" /translation="MKPHFPPNTILCLELTIWTSSCQTRLFSENWQHQNRKLVGSSTR RTAHYGFCCCSPSPTRGLASRQKEAEHQQKERRDRSRREGRTEESPVPTCYCYSTADE GEGMSLVPVMMGTSMKDTILQWIMIWIGIQSVSALECYDSSYPVPHRRTECGDNMKCY SEYYAVNRSGTIRQYYDRFCVHESHCLYRGIDESCPTLAQLDHKMQSLFTKHHAKSQV NSIRFSEFCCCSTNLCNDVNHKRVYDKYGLQITFADNVFTDASSSRTNIVSISFLICI ILYFVSIL" CDS complement(join(515895..515969,516038..516283, 516408..516473,516707..516793)) /gene="Cbr-trx-3" /locus_tag="CBG_01696" /standard_name="CBG01696" /product="Protein CBR-TRX-3" /note="C. briggsae CBR-TRX-3 protein; contains similarity to Pfam domains PF00085 (Thioredoxin) , PF08534 (Redoxin) , PF00578 (AhpC/TSA family) contains similarity to Interpro domains IPR013740 (Redoxin), IPR000866 (Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant), IPR013766 (Thioredoxin domain), IPR017937 (Thioredoxin, conserved site)" /note="Predicted" /db_xref="GOA:A8WR24" /db_xref="InterPro:IPR012336" /db_xref="InterPro:IPR013766" /db_xref="InterPro:IPR017937" /db_xref="InterPro:IPR036249" /db_xref="UniProtKB/TrEMBL:A8WR24" /protein_id="CAP22932.2" /translation="MSAENFFSGTSLRLKDGSMVDAGEHLKGKIVVLYFSASWCGPCR QFTPIMKELYQQIAATNQPIEVILLSRDYMRFQLDEYYEKQGCSWGVVPLRDPIIEKC LEKYDVKALPSCRVVDEFGNCLDANARHHVEMYREKRQMTELFNKWRQQMVQIRA" CDS join(522275..522322,522373..522442,522559..522618, 522668..522924,522973..523029) /gene="CBG01693" /locus_tag="CBG_01693" /standard_name="CBG01693" /product="Protein CBG01693" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR25" /protein_id="CAP22933.2" /translation="MSEAMSLKRPRSTSNTTEEPEEKYSAHTAAQQMLLNPALANATS ELEYPLSMMRKEKEDAQSASNTPASSRRQTMSTPSVGPRPIRVPQQSIFNPLHFGMLP QSQQLVPPNIEDAPSSSTGRPQSPAPHIYNVPSFQRADEEIYTKFVDSVRKLAAKLAM ERS" CDS complement(join(523932..524006,524052..524378, 524425..524550,524596..524670,524717..524948, 524994..525070,525116..525204,525250..525418, 525451..525606,525654..525765,525812..526005, 526055..526218,526269..526470,526521..526710, 526756..526796)) /gene="CBG01692" /locus_tag="CBG_01692" /standard_name="CBG01692" /product="Protein CBG01692" /note="contains similarity to Pfam domain PF07814 Wings apart-like protein regulation of heterochromatin contains similarity to Interpro domain IPR022771 (Wings apart-like protein)" /note="Predicted" /db_xref="GOA:A8WR26" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR012502" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR022771" /db_xref="InterPro:IPR039874" /db_xref="UniProtKB/TrEMBL:A8WR26" /protein_id="CAP22934.2" /translation="MASQSDPNDIFSKPIVRRRFQATLAQQEHNADEDQSSSTPDIVE APDAPDSSDVPLNPLSSPPLSLPETLSEGNPDTNLSDESEPEVLSQSSTSSLNKRMEE SAIGGESNARSFKRSSSSQGFDYESSPMATAPVQKKKKDEIDMGGAKFFPKQEKKHVY THKWTNDDDDNAIEDEHGASTSSSQRSRRVHQPAVSAVPRKPVYATSSSYSSSSSNIQ RQSIRHIKEANELRESGEYADFKHDLIYILSSLRSADASMKVKCLSAISLAKKCVSPD FRQFIKSENMTTSIVKAILNSPDDDLFALAASTVLYLLTRDFNSIKIDYHTLRLVSQL LRIENMEQRPEEKDKVLNLQEVGGQKASFDMRKDCLSPSSLIIEALVFICSRAVNDEI FKNELLNLGILQFIVAKIETNVNLIADGSEDTFHILVLNRCFRILESSSAFHKKNQAF LVSHRSNILIKSLAKFLQVIHDKVHDMPEETVKKYISCLALMCRLLINISHDNELCCS RLGQIDNFLPNALTTFTYLAPKYGKEDAYDINVMMTSLLTNLVERCNSNRKVLISQHV KMMIPGQEVEEVPALEAISRLFVYHEAQAQIVDADLDKELAFEEGGCGEGDEEDNEDS SDEDGVRKDGRLDRNKMDNMDQVDVVHALQQVMNKASAHMEGSVIASYHALLTGFVLQ QNEEHLDDVRKHLPGNTFENMIAQLKRLYEFTKATMSKRIESNSGFRAIERVIDYLER LD" CDS join(527253..527422,527473..527633,527683..527780) /gene="Cbr-htz-1" /locus_tag="CBG_01691" /standard_name="CBG01691" /product="Protein CBR-HTZ-1" /note="C. briggsae CBR-HTZ-1 protein; contains similarity to Pfam domain PF00125 Core histone H2A/H2B/H3/H4 contains similarity to Interpro domains IPR007125 (Histone core), IPR002119 (Histone H2A)" /note="Predicted" /db_xref="GOA:A8WR27" /db_xref="InterPro:IPR002119" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="InterPro:IPR032454" /db_xref="InterPro:IPR032458" /db_xref="UniProtKB/TrEMBL:A8WR27" /protein_id="CAP22935.1" /translation="MAGGKGKAGKDSGKSKSKVVSRSARAGLQFPVGRIHRFLKQRTT SSGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLHLAIRGDEELDTL IKATIAGGGVIPHIHRYLMNKKGAPVPGQKAAGAPGQGPQ" CDS join(528302..528401,528512..528825,528873..528963, 529108..529253,529451..529646,529885..530050, 530100..530139) /gene="Cbr-chat-1" /locus_tag="CBG_01690" /standard_name="CBG01690" /product="Protein CBR-CHAT-1" /note="C. briggsae CBR-CHAT-1 protein; contains similarity to Pfam domain PF03381 LEM3 (ligand-effect modulator 3) family / CDC50 family contains similarity to Interpro domain IPR005045 (Protein of unknown function DUF284, transmembrane eukaryotic)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WR28" /db_xref="InterPro:IPR005045" /db_xref="UniProtKB/TrEMBL:A8WR28" /protein_id="CAP22936.1" /translation="MPPRDAVQTATQLSGSASEGVQNDTKVLKNRPKASALRQQKLPA WQPILTATTVIPTVFVIGAIFLPIGVFLFIASDSVSEYPIEYTSCSPSPCRLQINLPN AFDGDVYLYYNLENYYQNHRRYVKSRNDQQYLGDLTNVKDCAPFDYDPETKKPIAPCG AIANSIFNDTFTLTYQSETGLPIEVPVTTQGVIWNVDKDRKFKNPPLNGGNLCDAFKD TVKPPNWRKNPCDVGGFENVDFIVWMRTAALPYFKKLWRIVDRNLNPAFTNGLPKGTY VLTVENNYPVQSFGGKKYFVISTTSWAGGKNSFLGIAYLVVGCLAIVLGVVFVFIHLK FGHSMNELSNVSGVHH" CDS join(531731..531823,535362..535364) /gene="CBG26436" /locus_tag="CBG_26436" /standard_name="CBG26436" /product="Protein CBG26436" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEX3" /protein_id="CAR98453.1" /translation="MATQSRWSTWQHIGDVVGVFSLRFYQQFRLQ" CDS join(536729..536828,536877..537001,537046..537574, 537829..537914) /gene="CBG01688" /locus_tag="CBG_01688" /standard_name="CBG01688" /product="Protein CBG01688" /note="contains similarity to Interpro domain IPR006627 (TDU repeat)" /note="Predicted" /db_xref="InterPro:IPR006627" /db_xref="UniProtKB/TrEMBL:A8WR29" /protein_id="CAP22937.1" /translation="MSRSIDSSSSRMLPSPITNFVTPSSSFSSHQMHDIYSLAASYLQ APPPPYTPTTTFHPHNAHQLLLLHNMTAAAQAPEDPDIDVVGLTDTTNLVSLNDKEEE EKLDQTMTSEESDRISISTTEESGPLDLTFKPASLDSPTSSSFVPLRPSVIIDHHISK PHTSVRRSMSSVSSSASSTQEEVANHFRRSLSGKWPKRCKVNSEEARSSPLRRRPSFN THTSVSSLSVHSVSPTPPNPPPAQTIIVNNHCTDTSLSVADHFRRALFGKGLFDFQRK SDK" CDS complement(join(538209..538362,538442..538652, 538710..539068,539113..539372,539686..539759, 539804..540050)) /gene="CBG01687" /locus_tag="CBG_01687" /standard_name="CBG01687" /product="Protein CBG01687" /note="contains similarity to Pfam domain PF01549 ShK domain-like contains similarity to Interpro domains IPR002350 (Proteinase inhibitor I1, Kazal), IPR003582 (Metridin-like ShK toxin)" /note="Predicted" /db_xref="InterPro:IPR003582" /db_xref="UniProtKB/TrEMBL:A8WR30" /protein_id="CAP22938.2" /translation="MIVMFDLDMQWYTVEKHVEIVLVGIEKILLICTYKNLEFCEDSK FITCSSERKKDCDDMLSDYCPKLCGKCYSKVKSDMKRIKTIPVTQFFKNPATTSTTTT TRSPSIRLKQPRMLPNGTFISPPLPKYEKLDDTTFTIPEHPTVIEYPMAHMEELIPEP QRIWPEPEPMRIQPISVYSPYAFVPLQHHTPQHYNPWSQQLGLTSSLDTSRRAPQNYY SSYNQYPQYPDEKINSITPSNPPASSSFENPMQLVEPFLAPGQPDLNPKSVSSLINLL GCKDKDEIICKHVTADTCLSRPGYYLKLCPVTCKNCSGYQCIDSIKIDCAEVKAQGAC KLSVASEYCPRTCEYCNPPSEMAQSMSDCKDELDTCEQLAESGACQHDFSKSALRLYC AKSCGFCKIPQFYFSDSPLMASVVSTRKLLKNSMNRRDRFLG" CDS join(543836..543960,544376..544545,544589..544725) /gene="CBG01685" /locus_tag="CBG_01685" /standard_name="CBG01685" /product="Protein CBG01685" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR31" /protein_id="CAP22939.1" /translation="MRRILIVLTTCAFADAIGTMLVQGRPDTIRTLRDIVRHSSHPSH APSHLDDRTPEVPTQPEIIINESKTLSPHPKKRNVRFIGKARARRHIGNVVVESGQCD HVDLMDCSDFETDEMTCMLTATGMTCCVCTGLLRAAKRSIF" CDS complement(join(546669..546770,546895..547078, 547132..547280,547354..547477,548456..548564, 553381..553450)) /gene="CBG01684" /locus_tag="CBG_01684" /standard_name="CBG01684" /product="Protein CBG01684" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR32" /protein_id="CAP22940.1" /translation="MLLHTFFDDSKSTVEETPRMFVARLFGSPVSTSVIPFEKENNNN NQETAKMPLDPMDSLWMSKAPQVSDLVVQPNVTFKAVTGGSAHSTSSSIPIAGGEDPI RPDFDTDCLWKPPTRSGRVQKERTISMDSTDSEVGALGGRKFSTNEGSSPVPTSPIEA QPRARRMSISEMLFGSSPKSFSWGMDSNNTTTTTTTTAGGADIGERKMSITDDPRFKD FMKHQSKIIGDDGISSAGFKRSNYMKD" CDS complement(join(555319..555718,555780..556004, 556052..556318,556366..556469,557118..557270, 557319..557416,557474..557679,557723..557814, 557866..557977,558542..558672)) /gene="CBG01683" /locus_tag="CBG_01683" /standard_name="CBG01683" /product="Protein CBG01683" /note="contains similarity to Pfam domain PF01697 Glycosyltransferase family 92 contains similarity to Interpro domain IPR008166 (Domain of unknown function DUF23)" /note="Predicted" /db_xref="GOA:A8WR33" /db_xref="InterPro:IPR008166" /db_xref="UniProtKB/TrEMBL:A8WR33" /protein_id="CAP22941.2" /translation="MHPNRQKTIVFVSFFILNWLLFHQLRRVKIIERNFILQGAVNKS LKLSNACIVPYWNQVTTDDVTHSDEFKKWRATGFGDTNNLIDAESRLLSAFVYPEEIS IITTALYTFGKPATCRYYDCNRIEIHSARFKSVVWPLSVITCPRRLGIEYVSVSFEDE EEEDNQVIREPIPLVFRAYEKPIHEISVCVGPLYGNESKWLETIEYVEHYRLLGATFF YFNLFNMNDYDRKIIDDYERLGLAESTKYVTEYLRVGWMSHLLQTHECHHRSKFHSKW VINMDIDERLVYTGPFNLKHYLKSMPPNIGEISFSTNRVLKTEKIPEKYTSEAKLLSD MMFIKYNKTTEISWYNLKGVIRPELVASLFFHWSFFQFEGVKVMSVPKRFGHVRHYRN VDGSALNGNWMDFYNGTLRETRLASSFEKKLAKAVRKRVKYVYDQRMIRCEEIPNWVT VRYRRELLDCKFKISKFLEFKIPELQNFRVSIPKNLRISELQIFRISESQTFRFSKSQ NFRNPETRNLRISDFQIFQIPELQKPRNSESQNLRISKFQNLGFSDFQNYKNPIPKYQ KFKSPISRNHNLRISEIQNFRISRRGQSF" CDS complement(join(561427..561718,561762..562178, 562224..562337,562379..562591,562639..562902, 562955..563140,563197..563438,563519..563660, 563702..564304,564355..564520,564568..564640, 564694..564768,564811..564921,564967..565182, 565394..565466,565515..565624,565669..565787, 565832..566020,566073..566153,566199..566357, 566399..566552)) /gene="Cbr-msh-5" /locus_tag="CBG_01682" /standard_name="CBG01682" /product="Protein CBR-MSH-5" /note="C. briggsae CBR-MSH-5 protein; contains similarity to Pfam domains PF00488 (MutS domain V) (2), PF05192 (MutS domain III) , PF05190 (MutS family domain IV) contains similarity to Interpro domains IPR007861 (DNA mismatch repair protein MutS, clamp), IPR007696 (DNA mismatch repair protein MutS, core), IPR000432 (DNA mismatch repair protein MutS, C-terminal)" /note="Predicted" /db_xref="GOA:A8WR34" /db_xref="InterPro:IPR000432" /db_xref="InterPro:IPR007696" /db_xref="InterPro:IPR007861" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR036187" /db_xref="UniProtKB/TrEMBL:A8WR34" /protein_id="CAP22942.2" /translation="MATRWRYYNSKRGNNNRGRGRGRNRGTSLTAISLPRQDRFPGGL NDDEFFQDKPMNAKEFVDETVLSVSFSGNMLGAACYEQSSQLVRIMNDVSEDHEFALL GRLIEEVKPTMIIANRSQDLDFIKLLSSKYAKHERLPSDGKSSSHTSTYDTIPTWDAS LVYSSDDVEEKEDQDDDDFDGPPATLHKLPNNFFKMPNALQRLKMMVGSDDAKMTDED KHIIVAMRFDIEAVNMMRSFGALLLFLDETRLGVENQPLSVSSPIKSIKTMTLENLVD IDYSTIQALDILPKEIESKKNVGKDRSLFSLVDRCRSTVGKKCLKKWFKNPTTDRAVL LSRQKCVHYFKQDWNAEITAKIASMLGKVTALNNVFQRFQSGTAKLLHWECFVSTVNA LVDVVHILRQTPIAKEFPVENSLLTEVSEIAIIASSIINFAESRIQGRVTVNPAIDEE LDKLRDIYENMPLFLTAVAKQECARLGLDAFSNVTIVYIPLVGFVLSLPTNFPVENYS DMSLVYAKSDEVRVRNETTERLDDEYGDILMKLIDSQTAIILALKTRVLKKKRSISKL LSVAARIDALISMGLVAAENGWNCPTLMDEPVIEALELFHPISVLVVKKNFVPNKVTS GRDGIKASIITGPNACGKSVYMKSIGILAFLTHIGSFVPARYAKVGIVDRIVTRMFTV DSVLDGMSTFAKDVEQVAFALRKATGNSSWISSFGILHDLLVNKGPEHCPHIFLASHF HALPKHIPLDKNIASFLTFKVLREGEGKIKYLFQLAPGLIDCSFXMAVAIEEGIPMPV IGRACRIYKALKSGVSLKEIKAEVSKNNDEKLVAEMDIVLRNEDGFIDAVESFVIRQQ REEIEAKARSEAKASYTEPSEVASLQDNLSSVSKRKSENYQRTRGQSVLSTKSAQSVD SVLDALLPKRKRIATPILNESNVTQEPPRSPDPFSIDDDSVTSKGEEREDVISTTMVP QMQRLASEEEEDHTTRSHSSVMANPQLADKYNTPAKPGGTKGCQPSSTSKFPISTKIP KTTDQTVLLNDDFNVPETPNQPNQTSRLSSRSFLMPQLPYPDKYVLDRIKERSTKDSM FKTPTNDRRLQKLTQGTPRDRDIHTPIQSSRNTPEAHNSMFKTPNATKSGHNMMTPRT SSRREFRKDDILETPQTPKNRSSFTPSGSPFSIFASQATFGGISSSETSDHDMSQFFG SLNNNRVEKAQSKNSQSTVFDTPVAKSSEKQRYPSQKSSSKSRVSPSSVVLERLTGEE SQKTPQPRGDYIIDFEFQINDTDPIYGKKDHLHGPSFDFLNSQDDADDNFMDFLDSPS SSRIDTGKKNRK" CDS complement(567395..567439) /gene="CBG26437" /locus_tag="CBG_26437" /standard_name="CBG26437" /product="Protein CBG26437" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEX4" /protein_id="CAR98454.1" /translation="MSEDEENENAIQRD" CDS join(567473..567532,567578..567879,568089..568230, 568283..568420,568680..568857,568907..569019) /gene="Cbr-str-185" /locus_tag="CBG_01681" /standard_name="CBG01681" /product="Protein CBR-STR-185" /note="C. briggsae CBR-STR-185 protein; contains similarity to Pfam domains PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) , PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd) contains similarity to Interpro domains IPR019422 (7TM GPCR, serpentine receptor class h (Srh)), IPR019421 (7TM GPCR, serpentine receptor class d (Srd))" /note="Predicted" /db_xref="GOA:A8WR35" /db_xref="InterPro:IPR019428" /db_xref="UniProtKB/TrEMBL:A8WR35" /protein_id="CAP22943.2" /translation="MIYISSFEALYSIWDVTTEPMVHSYKAAFVVFRNFKNSDFDREQ SFILIVIYCGCFGFSLAIFGVHFIYRYGAVVKEFRDRWLGGNKIYILFFMPIFYGTWW SILCYLYFHFDASTDDYMRRTIFDGYDTAIEDTSYIIVLFHPVDSNGNTYPDVAVFAS IACMWFMILSSVFCVFFFGLKCYFRITEALSKTCTVSSVTKSLQQQLFQALVVQTVIP LILMYIPIAILFTFPMIAVDIGFASSFIAMTIAVYPAIDPLPNMFIIKNYRKAVFAFF AAIFRNPCSSLRRAQCTQVELVSRSGTDVNIGIL" CDS complement(join(571684..571782,571835..572281, 572331..573159,573204..573295,573344..573415, 573469..573667,573717..573871)) /gene="Cbr-ell-1" /locus_tag="CBG_01680" /standard_name="CBG01680" /product="Protein CBR-ELL-1" /note="C. briggsae CBR-ELL-1 protein; contains similarity to Pfam domains PF07303 (Occludin homology domain) , PF10390 (RNA polymerase II elongation factor ELL) contains similarity to Interpro domains IPR019464 (RNA polymerase II elongation factor ELL), IPR010844 (Occludin/RNA polymerase II elongation factor, ELL domain)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WR36" /db_xref="InterPro:IPR010844" /db_xref="InterPro:IPR019464" /db_xref="InterPro:IPR031176" /db_xref="InterPro:IPR036390" /db_xref="InterPro:IPR042065" /db_xref="UniProtKB/TrEMBL:A8WR36" /protein_id="CAP22944.2" /translation="MLKSSASMNFSSSTNGYGHSPRDLLTGAAVTNNGGGATTTSPST PVNLDIQRIDNTEGTTVVMVKLTDEMFAALEEGQRSGKKLRIHVTEREGRVEIGDGTA SSKTNNTFSFQKQSLPDQTDTLVQSNGCFQNVGTYKMKYQVQATDKSFEETKKRAAEA AEKEKKRGTIDMKKGSVPSSSRYLNSSSSSTPRNLNGSSSSRVSPSFISSKASTSSFP NSKGTPNGFDSKKIDMKPELMKKSIKKRIIHLVVTQKYSNWEDVHKKLKSDGLPEEKD EAEKIRSCVEEVSETRPEMTVLSLRSSFLSEVDQRWMFFNQDEKAHVRRLCQSGSRAA PTESNFAPMRKKGMERMTASSKSSSEKDRVKEKVEEKALSPPKEQKPVVVVDDDDYYP VPEPANKRRAHNLAPPPSITPQTTSSQTEGTTPKRTKRNESTSPPVDQPQRAPEQPKL NPAKLAATISMQPVPKFEQPREYHTAASVAANGGGSTASSRISSPASSLSSPSQPSCN WEKTFGDIKSLTDAESYFHMFHKEYPMYMECHRKLTEVSSVFRKLEMKLANAMAVRKA SPSPQNVQEVKIVEREIQQRYAFYEKDPEFMRARQRHTDLRSKLNVLKTRIGNWESLR RQTATA" CDS complement(join(585959..586137,586176..586248, 586292..586837,586922..587053,587112..587355, 587398..587723,587833..587886)) /gene="Cbr-set-21" /locus_tag="CBG_01676" /standard_name="CBG01676" /product="Protein CBR-SET-21" /note="C. briggsae CBR-SET-21 protein; contains similarity to Pfam domain PF00856 SET domain contains similarity to Interpro domain IPR001214 (SET domain)" /note="Predicted" /db_xref="InterPro:IPR001214" /db_xref="UniProtKB/TrEMBL:A8WR37" /protein_id="CAP22945.2" /translation="MASPEPETRRKQRVYTATVPRIDVTGQFNDYNASDIENRKIMRK REAVLVRWDTDERHFYQQEYRKFYRKIKLDRDLLNYKYDWTNKDCHSQCFRIIAQSLQ SSRSDKMEDIDWFIEKFYKNEEHTIGIGKYDDTYTPPARRIRITKNITFDKNDVIPVY SDLPGETSKNLEIPDNFVYEYSNVNFVDKSQEPDLVKAMELAQQEENLIKCNCHSGDN IVSCYENKNCPCFKMNKKLRKFQFHIKDRPRCEFSSFKPIILAKHTDVMFDNIGFSCS EVCACAGKCTNNTLLLANKKIFPLEIYRQNPHVGFNIRSSVPIPAGTPFRTFTGEIRE SVNVSDEDLDYAFKVWQYNETRLPVDLKDMKFTGEYKRLLFELFQRDFFICPTTCGNV GRTAGHSCVPNVEILRVYQKSVSPAHINLIMVAREDIIPGTPLTIDYGADFAERLKDV CQCGTFACMGGRKYSDILIVYYFSFKLAPCVAKLHELKFEKYRDTVIDVIKEEEIAHR AKRRRLQAH" CDS join(588518..588520,588618..588741,589030..>589130) /gene="Cbr-rpl-7A" /locus_tag="CBG_01675" /standard_name="CBG01675" /product="Protein CBR-RPL-7A" /note="C. briggsae CBR-RPL-7A protein; contains similarity to Interpro domain IPR001921 (Ribosomal protein L7A/L8)" /note="Partially confirmed by transcript evidence" /db_xref="InterPro:IPR001921" /db_xref="UniProtKB/TrEMBL:A8WR38" /protein_id="CAP22946.3" /translation="MPSKKVIKKKVAAVPAHIRAQTQVQKEVKNPLFEKRPRNFNIGQ DIQPKRDVTRFVKWPKYIRLQRQSAILQKRLK" CDS complement(join(589315..589318,589371..589383, 589398..589651,589669..589882,590209..590326)) /gene="CBG26438" /locus_tag="CBG_26438" /standard_name="CBG26438" /product="Protein CBG26438" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEX5" /protein_id="CAR98455.1" /translation="MKKFSLETFQFLYGMYFYEFFLVSHGFLAPSDSKYYACLKLSKI TSTGTLKLELAGIRLGRHDSSPPVLADLLVALTEVVVDSLDEFVQGRLVLSETKNSLT HSLTLLSYGESSSGLSADNGSESSLSLDDGVWNVEFAAEGWEVENNLDWVDIVSDEDQ LSSAGFNKAGDGVDSMADSVWALGDFLLLSSSTSLDDPSC" CDS complement(join(591753..591920,591994..592031, 592180..592553,592605..592977,593076..593139)) /gene="CBG01674" /locus_tag="CBG_01674" /standard_name="CBG01674" /product="Protein CBG01674" /note="contains similarity to Pfam domain PF00923 Transaldolase contains similarity to Interpro domains IPR001585 (Transaldolase), IPR004730 (Transaldolase type 1), IPR018225 (Transaldolase, active site)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WR39" /db_xref="InterPro:IPR001585" /db_xref="InterPro:IPR004730" /db_xref="InterPro:IPR013785" /db_xref="InterPro:IPR018225" /db_xref="UniProtKB/TrEMBL:A8WR39" /protein_id="CAP22947.2" /translation="MSVLEQLKSASVVVADTGDFNAIKEFQPTDATTNPSLILAASKM EQYAALIDEAVAYAKEHATGHHGHQQIVQAAMDRLFVVFGKEILKTIPGRVSTEVDAR LSFDSQASIDRALGLIAQYEKEGISKERILIKLASTWEGIQAAKFLESQHGIHCNMTL LFNFEQAVACAESGVTLISPFVGRIMDWFVKNTDQKAYTRKDDPGVVSVTRIFNYYKK YDYKTQVMAASFRNTEEIKGLVGCDLLTISPALLKQLATETEAAPVVLSTSHVATHRE AATRPRYNFSAKELDLPKVTIDEKTFRWALNEDAMATEKLAEGIRNFAKDARTLEKLI EAKI" CDS complement(join(593493..593621,593768..594232, 594278..594604,594654..596716,596763..598451, 598501..599155,599205..600399,600444..600699, 600749..600952,600999..603210,603258..603444, 603499..604697,604744..605568,605599..606016, 606064..606410,606458..606590,606635..606832, 606883..607118,607167..607568)) /gene="CBG01673" /locus_tag="CBG_01673" /standard_name="CBG01673" /product="Protein CBG01673" /note="contains similarity to Pfam domains PF07726 (ATPase family associated with various cellular activities (AAA)) (2), PF07728 (AAA domain (dynein-related subfamily)) (6)contains similarity to Interpro domains IPR011704 (ATPase, dynein-related, AAA domain), IPR011703 (ATPase, AAA-3), IPR012099 (Midasin), IPR003593 (ATPase, AAA+ type, core), IPR002078 (RNA polymerase sigma factor 54, interaction), IPR002035 (von Willebrand factor, type A)" /note="Predicted" /db_xref="GOA:A8WR40" /db_xref="InterPro:IPR002035" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011704" /db_xref="InterPro:IPR012099" /db_xref="InterPro:IPR025662" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR036465" /db_xref="InterPro:IPR040848" /db_xref="InterPro:IPR041190" /db_xref="UniProtKB/TrEMBL:A8WR40" /protein_id="CAP22948.2" /translation="MGNKNKEKKKARKRQLSNSKTNEDLEVIEVSLQKKRLLDDSVDI VQAGNVRCAEKGTKKTVKSVLQHLFKDKPLETLPTRELIGNQLVAAIRNRHFAIVEGP LGCGKTFLGLYASSVLGLPIHVMQMGDQIDSKTLFGSYHCTEVAGQFVWKESTFAKWL QAPGVILLEDIDAANADVVSKIVDIATYRQTDASNSEKNLDFHNEVRIIATMSGKGKK TAVLDGVPVRIRVESLSDDELKRLASKSYPRIAHLSRTLISTFRKIENVPGTGNSRQL TSTDFLRGCARLALLPNISANVETFAELIDTWCLADPRQRANQLCNIVASSLNVNPDR VNTHLSVRQPEVKYDEHVVSVGRSKIPRKMSMIKTGRHRLGHTRDVVQLMERIGVCVS HNEPLLLVGETGVGKTSIVQAVADLIGVTLDVVNVSPTSDSDELIQGYKPTTIGRLME PFTKFYMEVFTKNFDSKNNQKFVDNLEKCLSSGRFKDYLSLVEATAIKALQRKCTNKE NDGQNFWFVQDKFAMVSKKEQLRSLSRKALFWRLRKKDIGFLLMRLTWLHQSVLTQSL THYQHPEHIQASTLESVVFHQEYERGLIVFIFKSSRFYRFTEFFVSETSDPFQLALIV SAYLPTVSQPFVENLVKFYMSAKQLYPSSYSLRTLCRALNFTADNMFGSVDQSIYEAV SMAFLTNLESEEKGVMRSKIQTAFRCKVGVMPEPKESHNYVKIGGYYVQKGTLLPEND PKYVITKTVKGNLAEIARIVCSGRFPILLEGETSAGKTSIICHLAKVTGNKIVRINNH EHTDVQEYMGSYVADSGGRLVFREGALVQAVRDGSWVILDELNLAPTDVIEALNRLLD DNRELFVSEINETIKAHPRFRLFATQNPAGSYAGRKRLSRALMSRFIVLRFLHLPIDE LSEMVRARCGISPNAALKMIEVLNELRNRRSLSGLFSARDGLMTLRDVFRWAKRLSTD ETTDDWLQILVNHGYFLLAGRCRNEKDEATVVETLEKIIKRNINKDELFSMESPYMPI DVITDKVVLTLGMRRMLVLTEQAWLRNEAVLMVGETGGGKTTLSELVGRGKLRSINCH EKTETADLLGRLRPKHDGGFEWSDGVVISAMREGAPLLVDEISLAEDSVLERLNPLFE EDRALLLSDAGTETEVVQSQSGFQIIATMNPGGDYGKKELSKALRNRFTEVWTSSDYT TSELATIFDHRLARVEATREESRISPTKTATSIVTWISQFFGKYSHVFRHAPSVRDVV ACAELYSSAVTAQIDSPIAIRDALCAVFLDSLAGLTTRLHIDAEEVFDDALTMLHTKL VKTELVSQFSDVSNFIQEAKKTVLIEQTSNCLIVAHLRVPFGSIPPKVPKAFSLKAPT CSENFYRIARGLLINKPILLEGAPGCGKSSTVMALAQLTGNPITRLNLSDQTDLSDLF GSDVPVLTEDGTMTFRWEDGPVLKAIKKGEWILLDEMNLASQSVLEGLNACFDHRKVL YIAELNREFVIPATSNCRFFACQNPRVQGGNRRALPKSFVNRFTNIYTNDLTKEDIVI VLNGVDEKNLLSDEQQRAMVTISEQCEKESERGTLLGGPYSFNLRDLLRWYDLIAAGR SLGEGFELVYMARIRREEDKELIRSIYEKTTNEKLVSRSVLLTVDAKDMRIGKCTLKR NPQTTPIASKRRLLASQMTLTHSVATCVELNWLTLLVGPRNCGKRTVIENIANICNRK LKSITLNADTDAQELIGNYEQVVDEDCLPDAKKKIIEIFQKKNVPVDRVQQVDDLNKL EATVELILSEIGNDEEIREVISIANLSSMRFEWTDSVFVDAYLHGDWLLIEDVNLCSA AVLDRLNSCLESGGKLVVAERQNSYEPLEPHPDFRVFLSMDARVGEVSRAMRNRSLEI YIDETSRWSSWPADVQAIVGSEISMELSKNVSRDLTTEQQLHFAALLEENGENFSTDV AWKLVGGQKDSSMEDDDEDDEVIVQKLACAPRIDQICELSGDYERYLISTWKHAAEKA KVSNVEAALMTFLSTSSWSIQNLLGDFQTIFGYDLVDSIVKRIPANLLNPFNRHLIDA EASSGFPTDQSSKFSRSILFEWIIQMISKIPIDQGSAEHLCNTLTKYEIATCDVTFNN LPQISQLVRSIIEMFKTSTTVSRHAHREVCISISYLLLIAASRRKLTTRTGCAAVYLA WNDLKNEATKAIGITCTESLTSVSAKIDEGWTSESYEKFVTEFIHRWRKFAVCSPFST EDQARLFLEHIETILREENTDNDVEMIEEDSDEEVEHKNTPIPVSPIELSNKVVESVD ALFEFLSSGIVNQKDDVFKKSNVYSGVDWKDPKSSQWIRTAAVFCVSVAACKIQEEDD ENVLVSDLLMIGGGAHCIATRLFFSSLNYNPALSSLNMAHLQKFPIKELGTKLWRLAV NSSSIRNVMKHALEHLGVGIEGWTNGDKNGIECGVEMMERALPPKETLDPVIFEEERS LFIRAKRRIVERQLSYLAEWRELVGRQSSDCDFSSSQVIIRGLNDLRKELADLDCEDG QHEDVIYRQSATQYNQICAEMRSFLDLVKSTISDMRSSSDESNDKMTVIRMARLKSFA MSAENFRISILRKFVSFVDVSMPFVAGLLIVEIAFNEMALKWKQEAKRQHATLSSAFP RFIKFYSTPSGLVSNEVSSWAIRDGSPMPLQLKSAVVRRKLSEIEDENLSSSITEIQW TRAQWKKWYEKNIAKAEQKDFIYRTKTEEEKDEMDIEEFFAKQEQDSQVLPDSDVSLL LEAVEQKKFSLVDDKSRKQSDERYEMALAWMRYVMSEVGAIPVEDSLWTQCIDGDQKL FEVLASHEGLSDDVDGEDTKVIDVYRNSSLRECRRVAVILERLSTRTKEVLERWPEVV SLKTIITTIDEFFTVSVSTPHIKVATQIENLIEVCEQWEMMADRANSLKDPLGELRRM LVDWKKMEVRCWSSLLVNCENEAKQRAQLVAFPLFESLFEATTPEMEASIIPMSIEWM HNATLVDFSTRVLTIKSLSRWAKIAGKGVLAKQLEAASRHFAIFTERVEQRLKDAREP AEKGLKDYLRVVKYNDLNLWNIRVSSIKAHAQLYKIVRRFKDAINAELHEDFGILQKI EEWKRKVFDQDASTSDEDLTGNDCEKRIKQVRKFATEINEKFSHLCGTTAIEELYEQT KAADEAIRTMINYVGEDEEKEKQQGYARNSRQRQVAMMIKESQAIGLNARKAVLLVQE DINKSSILDVVSKEECEKEMRICSSGRNIVIQKVNKIDQQVGISTRKHLSGMIGLFFK ITVIYNIIFLSEYGMSYMISLQQSIGDLKSSISKMHSFSAHLKVLSENQRSGWIIDHE IVKGRIEKVAGLISSMEVFVGSMKRRLEAIPYHSDEFIRSKSHLHQLSKLSQSDEIAQ KLVNWSAKLSTLIENMKRINENFGNTSIFKSIEYAIWRSQLNEDSKALLDILNLFDGF FESEKQQISKNLEEMSLWTKEFDSSVPVEECETDVTQLLLLVQNIYKKLNAVKVNEEP KALDQINILRDILKQSDVETVVKYLAEIVQKHSSGETCGRNIEGLAELSKMTASIIES GVTHLSNCLGYFCVFYHSMLSMTMQLYEKGYVNSIPKAEKQESGDGQTDDTGEGGGIG EGGTAKDAKDVTDEMEETGQIEGLEDEQPADSEEHESKNDNERPIDMEDDFAEDLEDI DKNEKGNQDEGEDQSDEEPDVEDQMGDVEEEDEKQLDPKMWDEEEKEQEQQKNMDQEQ QAADNQTDEMVAKEDDAQTKDEDQDKAGKDEEKNDQPEEDEQENMDERDRENDERAED QMDTSEPNVDDEHPEKGEIDETEDGDDGDETDKEDEEAIEGDGEEDQNEQQDLVDVED STQKNEEAEEQKKEDEALEQGTGGEQNDQDDKQDAADGGLAEEEEKEDQEDKDEKGEG KSKSDPNGDGSKGEAPKEQTKKEDEEKEEEDDEEKVERKRELATDDAPMEEAEMGEGE ENESGQQMENAEISDRQQVGKGTIEEAQQTKREDKREEEKKKRRELKDAVEGTSGEND GGEVEDEDAEETKDAHIHMAAQDMFTVIEETTKDLVTGMIDEPESPERPDQSTVRRIN EKADEQWAAMSRTVGMLAAELAENLRLILEPQRANKMQGDYRSGKRLNMRRLIPYIAS EYRKDRIWMRRTKRAQREYQIMIAVDDSESMNENGIHQSTCESVCIVEDALRRCDAGR VSVCSFGANVETIIPFGEASASSSIEMLKQMTFSQKKTDLLLLLKNAKQQLDEIRTAT SEQMLIVISDGRGALSQGADKVRALYSALQGVTVLFIILDSGKKSIEDHTVASFKDNK VILTPYLSIFPFPFYALVKSVQQLPSVIAESIRQWFEMTTQHS" CDS complement(join(608148..608282,608329..608652, 608761..608960,609073..609127,609178..609561)) /gene="CBG01672" /locus_tag="CBG_01672" /standard_name="CBG01672" /product="Protein CBG01672" /note="contains similarity to Interpro domain IPR002317 (Seryl-tRNA synthetase, class IIa)" /note="Predicted" /db_xref="GOA:A8WR41" /db_xref="InterPro:IPR002317" /db_xref="UniProtKB/TrEMBL:A8WR41" /protein_id="CAP22949.2" /translation="MCLNCHLELCIFRQLEMPSEELGMPSEERLLLKNSISKHAWQET GEVSSASNCTDFQARRLGIKYKTADGTTKYVHTCNGTALPSTRTLISVLETFQNVSVL KVGRHEKNNVVEIPFKYAPRGVELVERKQLPDCEGDSCTQSDIRRQKRNWRASGSPSE ENSNVAAHIGSSRQNLSLKYQPTGMITSSIRVLLIRSSLIIKCSIPIKFSSNERKNDN RSGVSLIGILIFTVLVGLLLVYACRVDMKHWRKSIDARVQLEYPNASLAEYQLPQLHR AQENPGTPLEAETTQIERSQDEKTLRIVRAMYNASNRDVPESVQKSIQSKSSRLAGPQ KTVTTTTMQTISEKDNEQELPEKISTKSSEK" CDS complement(join(610727..610823,610890..610991, 611036..611346)) /gene="CBG26439" /locus_tag="CBG_26439" /standard_name="CBG26439" /product="Protein CBG26439" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEX6" /protein_id="CAR98456.1" /translation="MFGSVDQSVYEAVSMEFLTNLESEGKGVMRSKIRTAFRCKVGVM PEPKVSHNNAASAAMSDILRFISGRIGDYEKQQTIKDWTDKVMKEIPHFMYTMFGRTR KHVARYLAIELNRVEKLDGFSLMEKLQLAFMRMEVYKNMSKKRKERDQHDGEDERPME GEEVPNQGF" CDS complement(join(611901..611977,612035..612187, 612257..612284)) /gene="CBG26440" /locus_tag="CBG_26440" /standard_name="CBG26440" /product="Protein CBG26440" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEX7" /protein_id="CAR98457.1" /translation="MERKTVAIYIRLHWLVQGGGGGEIAPAFKFHRFCNQLSFFFVSD NLQSFSVNFFQKFSEKYTSREFAQTLVVGTLRQVALDVTNK" CDS complement(join(612697..613059,613106..613432, 613479..613909,613957..614796,614839..615774, 615821..616465,616517..617069,617113..617204, 617661..617827,618015..618255,618274..618304)) /gene="CBG01670" /locus_tag="CBG_01670" /standard_name="CBG01670" /product="Protein CBG01670" /note="contains similarity to Pfam domain PF01607 Chitin binding Peritrophin-A domain contains similarity to Interpro domain IPR002557 (Chitin binding domain)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WR42" /db_xref="InterPro:IPR002557" /db_xref="InterPro:IPR036508" /db_xref="UniProtKB/TrEMBL:A8WR42" /protein_id="CAP22950.2" /translation="MCSKRNSGNSVYRKLFCFPQRIDCLKGKHAWKLIKNMTISSEFF TFYSVFVDVKLCSRFLKSWKYEFILESSKKSKNFETNYSPVLLASEVSPRSPRAKNSI LSRRTSFFLFFSSFFFRLSQFSVDFLWVIQGVGKKGKKLRENSEITNSLQSQYSSTPE CPAYYNGSIAGGSCSREYSLCVKGIRQTAKCSDGYVFYEDGCVPIEDSPECQLADDTE EEPYDSFDCSSKRDGLYSIGCVNQFVNCVSGRAYQMYCPDDLVFHGKTQECQESCDDV EENATTASPVVYRNEDDDEGYEEGSGETEGYYDPEATTEEPIDYNCNGLENGNYADGC SDVFYTCNNGVVFRRYCPQETVFNPSQQACDYDCTETVTTTTQAYVLTTDADVPSTTT SEYTTTPQDDEPEYITTPGFDDVTTTQASIVTVPTTTAQAPIVCHEGQITSFGMCSSR FNRCQNNSVRSKQCPVNTLFESALVLCVFDLPQCQPVTYPSNPTYNTYGGLPSDTIVS PFDENVRLKPKFNRRPKYHYGPYRQPGYGNQGYGNTLIENPFFISRHHPYRHGGDRHR GRGHRRGYYRPAIDSPFSTAFRGRAALDDQFKDYRRAKMGKLRYGEARKVEGNKRIIL DDEFEGPKARFVQSDIQRIFPEDRHSKRKLGPREDPDGYKDDKNFDPKDLFGSTERRK RSVSYGTQKSGYAQQNTQITARQAQVNKDCQPYTTPTFLTFGDCFDQFIYCSGNGVNR MAACPIGETFNKALRACSETCGVVTPVVTSTVGTPTSDDSYWSATTTGSSDDTFTTQA PSTYESYTTTQSWNDQPATTQSWNDQPATTTASTPVGDRCSSVPSGLFSLGCSQKYIQ CSNGAAIVRRCGGSLYFNQPQQQCSFRDEVTECGGQATTNYSPVVIVPAGEQTTDSYG TPSDDAPSTTRAPVGDRCAYVSSGLFAIGCSQKYIQCSNGAAIVRQCSANLYFNQATE TCTFQDVIPECEWEIPEHRQVYISGESGFSSTSAPRQDDQTIGYGLSDDQPSTTSEYG SSTTSGYRSPYNPSEDLPSTTSRYNYGPSDDSSSTTTSGYKKSSQPAKDQPTTYSPSI APYRLSVSGDDQDEPLDACTGLSDGTHGQGCSSSFIICSYGRLVNSITCRLGQGYDPS IQNCRTFSQIPAQACDQEETTTDAGLVRLLPYVTLEAVLSTTTQAITTTAYDDNETAA SDEYTTTAVYGEDTPSSDSPAQDVVVVSDSYNRADDESEEEEDAGYEQKCTPGSRAST GFCVKIYLECTASGYVEKSCRVGKLFDSNSNRCVARIACGKEAIRDAIKDIIATTPAT TKEVDGRCAHVEGEGVFALGTCSSNYVRCTYGAAKLENCPGKQVFSRTQSICVSRETD TECSTPQNAAVKSYYNNNEQSAYCDGKSDGLYGNKKDCSAILQCFGGELFEHASCPSN LAFNELTAKCDYPQKVNGCENHGRTEGVCSEHGAFIADVNNCSVFYRCVWGRKVVMRC PSGTVFNPALSVCDWPSAVPSCGAAPQAAGDSSYGTSSSYNDDNSGY" assembly_gap 617605..617614 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(618507..619728,620055..620239)) /gene="Cbr-sars-2" /locus_tag="CBG_01669" /standard_name="CBG01669" /product="Protein CBR-SARS-2" /note="C. briggsae CBR-SARS-2 protein; contains similarity to Pfam domain PF00587 tRNA synthetase class II core domain (G, H, P, S and T) contains similarity to Interpro domains IPR002314 (Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain), IPR002317 (Seryl-tRNA synthetase, class IIa)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WR43" /db_xref="InterPro:IPR002314" /db_xref="InterPro:IPR002317" /db_xref="InterPro:IPR006195" /db_xref="UniProtKB/TrEMBL:A8WR43" /protein_id="CAP22951.2" /translation="MRRLYQLALRSRNLNVGLARRFTSTEASTSEEDSTPPTLRPDLN FEFLLNEKNIEAIKENILNRKGVGDIDKVHEKWAVIQKMMNSGEKPNDINEQKYAQLW NELYDEAILIPNMTQDGVPQGSEENAKKVSEWGDKREDDCLTAEKLVQNWRSLLHPTE ASGQRSYVFLGSLASLEKALLDYAYERVCALGFRPITVPDLVSGEVTQACGVMQRSEH PIQYTLAGDEAHTKLSGTAEMGIAAFLRGRTFQEEQLPIRLVSLSRCFRTEISKSASE AKLYRVHEFSKVEMFVVCTPEQSLAELDYVVEVQKGTFQALGIHCRYQKPFHCHLELC IFRQLEMPSEELGASAAKKFDIEAWMPGRKLYGEVSSASNCTDFQARRLGIKYKTADG TTKYVHTCNGTALSSTRTLISVLETFQNVSVSMITSDRCNSLLQDKKGLGELPDPLRK RIKQRGGPLRFQPAKSLA" CDS complement(join(620412..620969,621017..621154, 621201..621442,621490..621966,622171..622336)) /gene="CBG01668" /locus_tag="CBG_01668" /standard_name="CBG01668" /product="Protein CBG01668" /note="contains similarity to Pfam domains PF08567 (TFIIH p62 subunit, N-terminal domain) , PF01507 (Phosphoadenosine phosphosulfate reductase family) , PF03909 (BSD domain) (2)contains similarity to Interpro domains IPR002500 (Phosphoadenosine phosphosulphate reductase), IPR013876 (TFIIH p62 subunit, N-terminal), IPR005607 (BSD)" /note="Predicted" /db_xref="GOA:A8WR44" /db_xref="InterPro:IPR005607" /db_xref="InterPro:IPR011993" /db_xref="InterPro:IPR013876" /db_xref="InterPro:IPR027079" /db_xref="UniProtKB/TrEMBL:A8WR44" /protein_id="CAP22952.1" /translation="MSDETEALVRVDNVKYRKAGEGKSPIGRLILFSDYIEWRDNASP EVFTCKFIRINGQRVSPPHKSKVQLQLNLRNDEQATFVFLDPGASKEELTKQRDNIKE KLQAALLEHRHRVQELAKSVESQSKQVELQAKQKILQEDRNLEKLYKNLVATKVITPQ DFWADYYQKEGVSEDRIGINGAFLANIVQQEGTNGVRLNLNPDIIQAIYTTYPAVQKK NLELVPHEMSEETFWKKFFQSHYFHREKEVLPNPKDPFAECVRDDEEEMTKMTSERIQ RKRFDLDHIDDNGLRDFVHKSESLPKTTRNTLIKRCNYLSEKILASSWKTGETKTSGK KGFGVLDRLVAETEGRLESEDLAEKEIEEEVQLVRINSSAKASQSVYSKKDVAKYKGI VADYFQNWSVEDILHRNEMLLDQQEMDALEMEEAMREDEDKASPPEAWCQSAQELGKI RDIHSSVREICRQFWKCFPPVSNETEEKLIRMAGTLEKFKNEITNKDMDPANIAHCTQ MIDLALQKFEAYDSKKMQ" CDS complement(join(622593..622786,623101..623198, 623689..623732)) /gene="CBG26441" /locus_tag="CBG_26441" /standard_name="CBG26441" /product="Protein CBG26441" /note="contains similarity to Pfam domain PF08567 TFIIH p62 subunit, N-terminal domain contains similarity to Interpro domain IPR013876 (TFIIH p62 subunit, N-terminal)" /note="Predicted" /db_xref="GOA:B6IEX8" /db_xref="InterPro:IPR011993" /db_xref="InterPro:IPR013876" /db_xref="InterPro:IPR027079" /db_xref="UniProtKB/TrEMBL:B6IEX8" /protein_id="CAR98458.1" /translation="MAHENEALLRVENVKSPIGQLILFDDHIEWRDNASPEVFTCNFD RIVGQRVSPPHRARAQLELVLRNDDEQVTFVFFDPRASQEELAQQRDNVKQQLQTALF QHFQLVHNQ" CDS complement(join(623900..624219,624266..624537, 624585..625197,625244..625349,625401..625514, 625561..625653,625708..626020,626076..626280, 626330..626765)) /gene="CBG01667" /locus_tag="CBG_01667" /standard_name="CBG01667" /product="Protein CBG01667" /note="Predicted" /db_xref="InterPro:IPR019355" /db_xref="UniProtKB/TrEMBL:A8WR45" /protein_id="CAP22953.1" /translation="MEQRDMKTVVVLDRNADFAEETNETFDIAIREGVKQKKLEIKKD YWTWCVESVFEMHRILSDVYPHGSLQIRIALADYLARMLDAEWTTDLITRAELGELIE KTGKPCPEDIDIDSTCGWQMAIEALAVESPEQIEHNFNARFNIKKRSDQNSEVARVTK ELNDEPASPAIENNGNLIIYTRYKTDEEMMEAKEEIASLVSSVNAIASSESNRTFCPI TSLRVFIVNFYGADEECAVKTHSLEEYPDLPLLKFWVISRKASDMCVAIHSVLVAAFD LSSTTVTKIPMKEDNRGSTNYDVELFHSSKVHEQLKENNLIARVSEKGNANSGVTYDT MRLTWTTAPKIKWTLFPYHDDAVPCTTAVAYSRPSACLTQFVRDGRCVMLDSEKTSLL GMNMPDKLVSHILIANRGRMYILDIDFMQKKMRRLQRLRELKPPRRVRIRDPINVHQL KHTFKQIEFKKVGKNFLEDDNVAEQKGKQRKRLKTLDIQKRLRCITKNIPMYQEDTFI FYSDEVTKKLEPLVTKITKRRLTPADVQQCNSKIMKLHQMRALKEFIVPEDADIDACL VEDLSDPEEQMRVAIVELAKHLMKYSNFSVRHKAVYKTFMTTMGADKLLEVDLEDDEA IDKMFVKRPFFMKTRGDTDVSSESESSDTCSSCSDEEEEEMEEDDNKEGEGSGHRSRN MLKRFLKYADRDGSPTIVDKSKNAKLDELLFELAKDIEFDLFTNVCERIEKKEEGQRR EFVGREAHGNKAPLYPQLAEKFENPASPAGIVDGSERPERAEKLPDRPVRIERAERTE KLRNLERGVRGGSGTPPPLRRPPFN" CDS complement(join(626940..627297,627344..627848, 627899..628016)) /gene="CBG01666" /locus_tag="CBG_01666" /standard_name="CBG01666" /product="Protein CBG01666" /note="contains similarity to Pfam domain PF01239 Protein prenyltransferase alpha subunit repeat contains similarity to Interpro domain IPR002088 (Protein prenyltransferase, alpha subunit)" /note="Predicted" /db_xref="GOA:A8WR46" /db_xref="InterPro:IPR002088" /db_xref="UniProtKB/TrEMBL:A8WR46" /protein_id="CAP22954.1" /translation="MNEISSSPLYKDNADWKDVTPIYPGKDEEVAVKIAVTEDFIDAF AYFRAVLIKKEKSPRVMTLLEDCIRLNPANYTVWQYRRLCLTELGCDLKKEMRYLDEI IEESSKNYQVWHHRRFIVELIGESVAQGELSFCEKIIQDEEKNYHAWQHRQWVARTFK VPLDAELSFALKMLLIDSRNNSVYNYRYFLLTLHDKIEDKSMIDIEINLAKQFIRNIP NNESAWNYLTGLLINDGITANCDVVSFVEDLYDTTPEKKRSPFLLAFIADIMLENIEN QVKADESAERAKQLYSELQKSDPVRVNYYKHQSLLAQTMLVKSQTKVAAK" CDS join(628718..628781,628831..628955,629004..629174, 629226..629336,629392..629619) /gene="Cbr-cogc-8" /locus_tag="CBG_01665" /standard_name="CBG01665" /product="Protein CBR-COGC-8" /note="C. briggsae CBR-COGC-8 protein; contains similarity to Pfam domain PF04124 Dor1-like family contains similarity to Interpro domain IPR007255 (Dor1-like protein)" /note="Predicted" /db_xref="GOA:A8WR47" /db_xref="InterPro:IPR007255" /db_xref="UniProtKB/TrEMBL:A8WR47" /protein_id="CAP22955.2" /translation="MDSDFNFQNGDDIRNMGLEEMRRQKVLLASELKAIDAQISDLAF NNYGTYADAGRATHDCSKTFGEMRDKTVDLSSQAEELTNAFQEFRVKAKQLSEEQDLV RKALDKSNPIWELLTLPSRMDVCIRAGYYDLAYTLTNYGMQLQQQTQLYKNPLIKKVA DHLVEARSYLLEELFNKFAGPLDLAESIKVVNNVRKMPYLTANQLRIAVLQHRDIYLE KQILDISVSIKEIY" CDS complement(join(629686..629914,629962..630345, 630390..630482,631869..632000,632452..632567, 632657..632791,632839..633600,634796..634890, 635565..635598)) /gene="CBG01664" /locus_tag="CBG_01664" /standard_name="CBG01664" /product="Protein CBG01664" /note="contains similarity to Pfam domains PF08534 (Redoxin) , PF10417 (C-terminal domain of 1-Cys peroxiredoxin) , PF00578 (AhpC/TSA family) contains similarity to Interpro domains IPR019479 (Peroxiredoxin, C-terminal), IPR013740 (Redoxin), IPR000866 (Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant)" /note="Predicted" /db_xref="GOA:A8WR48" /db_xref="InterPro:IPR000866" /db_xref="InterPro:IPR002123" /db_xref="InterPro:IPR013766" /db_xref="InterPro:IPR019479" /db_xref="InterPro:IPR036249" /db_xref="UniProtKB/TrEMBL:A8WR48" /protein_id="CAP22956.1" /translation="MAISEWIQALQDVAWPGFLQPHVEVLLLWITWAVDYIDLDYLEY LLWLLLPFFILFIFPIFLVLFIYGCVIFVHIYGHRHQIREAYHTSYWEGARVAIASFW DGVGNVWHGYELKGIENVPDEGSALFIYYHGCLPLDVYYLISKLVIHKNRSLHCVGDK FIFKIPGWRPLCKLFSITAGTVEECTEELKEGNLLCIAPGGVREALFSDPNVYDILWG KRLGFAKVIIGSKTPVIPMFTENCRESFRTPEWGRSFFRWIYEKTKIPLCPIYGGFPV KMITHLGKPIYFDFDTVTPEEVRKTVKREIRSMIKEHQRLPGSVWQGIAQRWSAPSKK KTDEPEQAELLQRNGAGTTSPTSDSEDVVVLRRERSGIDNDDAEIDEFLDNFILTDSL QMRLWCCLGNQNLFFYAIIVRFFKSLFCFISTRFTMKLGDTVPNFTFDTDLRKDQSLH SYIGDNWLMLFSHPADFTPVCTTELAELVKLAPEFSMRHVEILAISIDSSETHRAWAK DINAVVKGCLSVGHHLPFEIIADTDRSICTELGMIDPDEVNSQGICLSARAVMLFGPD RKLKSKILYPATFGRNFVEILRMVDGVQLGSKAPVATPANWTSGKNVIAQPSLSQERV VEELCGGDPDKCKIVPLPSGKRYLRVIEGDAYLKS" CDS complement(join(635965..636111,636202..636357, 636584..636706,636750..636833)) /gene="Cbr-gfrp-1" /locus_tag="CBG_01663" /standard_name="CBG01663" /product="Protein CBR-GFRP-1" /note="C. briggsae CBR-GFRP-1 protein; contains similarity to Interpro domain IPR009112 (GTP cyclohydrolase I, feedback regulatory protein)" /note="Predicted" /db_xref="GOA:A8WR49" /db_xref="InterPro:IPR009112" /db_xref="InterPro:IPR036717" /db_xref="UniProtKB/TrEMBL:A8WR49" /protein_id="CAP22957.2" /translation="MVGDGESDAKLMEKLEAKLMKQLGNEFQEYITKWSPRKVLNQLE KEGWQVVAMAGIGQTCAWTLYKADPVQTTTLVKVAAGVFVMGSTGLYLAQKSVQWKVR KLPHYNESLKIVFEHPKALEAIGAPISVGSVELSDRVHNYVDKTTSRVSSFSFFSFDN YVYFSYEFL" CDS complement(join(637330..637453,637499..637761, 637810..637999,638082..638296,638347..638906, 638952..639062,639119..639157,639474..640002, 640052..640153,640185..640304)) /gene="Cbr-csn-3" /locus_tag="CBG_01662" /standard_name="CBG01662" /product="Protein CBR-CSN-3" /note="C. briggsae CBR-CSN-3 protein; contains similarity to Pfam domain PF01399 PCI domain contains similarity to Interpro domain IPR000717 (Proteasome component (PCI) domain)" /note="Predicted" /db_xref="GOA:A8WR50" /db_xref="InterPro:IPR000717" /db_xref="InterPro:IPR037753" /db_xref="UniProtKB/TrEMBL:A8WR50" /protein_id="CAP22958.1" /translation="MSRDVSLSPKSNENRFGSGATANEPIKVEVVNEEQVDCNLNSTA NQLGFSSTLSTSFVASEDLSESIDDLTVTKEKKKIKPSKLAEDLTRKRKDTTNSITNF FHRFTRGDREEKKIVEEEEEEPVERPEKLISPESEEKWFESRTLDEQHIGHEANADVY EWDPNNMSETLVREPPPLDPNNAIFEEKGMLKLLEEFRNGELRWLDEPQISAMEKVKE AHEDVSNIHLKVYEIESAKRKKRKNKLSKESVRIVESLENNKAMATFFNKFFTGASSS AASSDCGNMDMLCQAINQLQTESHENVGERAADIVRQNKDLFEKKTADVEVFLTNCNA HVGSAAMAAAIKGLFDSSSSKNNEQGQERAVELIHHYLEENQLIGEHLKLVPEFIFPL IRSVGCYCMEKKHKPEIGQKIISKALATMYPPGGSHSNVLTSAHSVLFACALKTKDYS SVEPFVNIHIDEVANEKRVQDASLDEQFPTYSIARLKGSHKGQGPMSSLGNTNTPSPY LNPKFVLDYLYNGACVLIELKNYKGALFLLETLLSIPAYSAQDQIVEGYKKFVLVSLI LNGVVVDNTDKLPGTRSLKLKTPEYKHLSEVKFNRSANTHAKVDELVQNAKDKLRRDG NLELAKLMVAEMRKKTIVALAKIFSSVRVSEIQKLAFLKNRNQVTDLIEQLVAENRIN VTVEGEMVFWSEVAPVPSRHDILEKIAKVDHLNNLLQIKNKDMKSGSGRQKPSILYNE DEGLSMPPIE" CDS complement(join(640714..640923,640969..641062, 641121..641635,641683..641841,643639..643707)) /gene="Cbr-pnc-1" /locus_tag="CBG_01661" /standard_name="CBG01661" /product="Protein CBR-PNC-1" /note="C. briggsae CBR-PNC-1 protein; contains similarity to Pfam domain PF00857 Isochorismatase family contains similarity to Interpro domain IPR000868 (Isochorismatase-like)" /note="Predicted" /db_xref="GOA:A8WR51" /db_xref="InterPro:IPR000868" /db_xref="InterPro:IPR036380" /db_xref="UniProtKB/TrEMBL:A8WR51" /protein_id="CAP22959.1" /translation="MNIMTLSQNLLLRRAMAFAGLVWMVHSENATDTTNTVSNNNNTI LGNQSQSIAEQLSQLTGNSVKDSEKIMNSWLGKRQWDLTTSVQFDQEVLSRLRSLRVA LLVVDFQNDFVDGSLKIGDGDAGQDPANAIGPLNELLQLNTWDLVVYTKDWHPHNHIS FLSQAHNSDREMEKKDENRTLNFFDSVQFMKPIKTEQILYPDHCIQRSWGSEIHPEVY VYPKAEYIMKGVDPYLDSYSAFNDNNGRSKTELEDVLRREGIDAVVIAGLAYDICVRF TCLDAVKQNFLAAVIPECSAGLMKKGIEESESAFKKHGVAMISKEEAKGITDGEFLPN EWVQKIALAKKSSE" CDS complement(join(644255..644449,644750..645396, 645449..645898,645950..645983)) /gene="Cbr-tcl-2" /locus_tag="CBG_01660" /standard_name="CBG01660" /product="Protein CBR-TCL-2" /note="C. briggsae CBR-TCL-2 protein ;" /note="Predicted" /db_xref="GOA:A8WR52" /db_xref="UniProtKB/TrEMBL:A8WR52" /protein_id="CAP22960.1" /translation="MFPADNNAFYDDYYTQYNNNMNPTTSFNSQPRLSLDSGLGLTND SFCSTDLNETHLMDITAATASDVSTSFQSSGPLEHSPPTKWARIRTPPNRKRTSRDPV FNFFSPPSQKKIRTMFSSPTKLIKTPESLRKSIRISSPSPFKVTFSKTPLKLSNNENV TGIHIGRSGTYYNKRVTGSASKRCLLPSKPDGFTLLGSPNSDVRFQYLQLLHTEHCIF QVLDIPMEDKFDEFGDFPSTTPSKINTDLFEVSNDSMDYHQYAGMIETGSFLNKYTHS SGPLLATHFRSTNPIVRSASRNLLKSNSDTFQVEPKTSQTLPSIKAELEEIPSFSSVK TKKARVKPKQKSVKRDQLRQTKEKEMKDWKLVPFETPKKEASLYSGRWLVISTGRTLA QKELFSDAKDFFKTHPPSTPEPMPLMPNRRTPAIARVTLFKNRYRSFNI" CDS complement(join(652259..652389,652437..652714, 653208..653295,653345..654182,654436..654553, 654605..654714,654909..655105,655876..655960)) /gene="CBG01658" /locus_tag="CBG_01658" /standard_name="CBG01658" /product="Protein CBG01658" /note="contains similarity to Pfam domain PF00100 Zona pellucida-like domain contains similarity to Interpro domain IPR001507 (Zona pellucida sperm-binding protein)" /note="Predicted" /db_xref="GOA:A8WR53" /db_xref="InterPro:IPR001507" /db_xref="UniProtKB/TrEMBL:A8WR53" /protein_id="CAP22961.1" /translation="MKRSFLLFLLSLKFCQNQYVTPQYAEIRAVSAMCSSDGITASID FDKPFTGKIYSLNYATSNDCLYYNNIDRDTVLFSIPAQLCGTKLQRTTRNMIDQMENR VYVQMDKDTQTSSDKQFSFVCRLTDPLKTAAAKDDGIGTKDSYQQQPIRPVASSVSTK MHSNLMPIKPSEVRQVAAFSRDSHLGNWPIPGAKPYEPSMKPVSTYPMSPISPELSAP STHLAKDPSEGYETRLISTVGIPSMPPPLFPNLPPLPIPQRSPHVMARVFTTSTTAFP PIMFTFPTTTTPPPLPLPIIPNVHFKQGVGVPFAPGILPSTKVDASQWNDPNAYATPP TVSNVDVTTPKTYREQPPTADAPFSSDNANSKEIHEASADETSGASSEKSKKPQSDDP GRNPVTSVLKTTQEQQIEPEVTLEIQRGEGPFAPPVTTPIKIGDNISLVVKAKSYLNE TDQFDMFVHSCFATDGKGDTKVQMIDENGCVIRREFASPLHRAKDSENMMFYYLMIKA FKFPGPDDVYFSCTIEFTPMIKAPNICSKLRRRREILEEGMSEMRLFDSVSVELDDGD TNVKTDPLKSEDCDTEKHLYILVICILLASTTLSLFSNLYQYIRAQYK" CDS complement(join(656829..657245,657290..657370)) /gene="CBG01657" /locus_tag="CBG_01657" /standard_name="CBG01657" /product="Protein CBG01657" /note="Predicted" /db_xref="GOA:A8WR54" /db_xref="UniProtKB/TrEMBL:A8WR54" /protein_id="CAP22962.1" /translation="MDQIPPYEFHKYVFAARAAVITCSSFELLMVLFGSLGDCNFLAK LFYFIFLGGAAAISAHNIALNIDGREEINKVLSSTDNEVRGKSAAIVLVPAVSGIFVF LCVSGHAFFSLFVLIHVLASVGQLGIEAYEVSKGSSGGAPVATPVEAAAPPPAQDPAA VPPPQ" CDS join(657859..658197,658244..659167,659215..659653, 659703..660037,660069..660378,660429..660921, 660973..661195) /gene="CBG01656" /locus_tag="CBG_01656" /standard_name="CBG01656" /product="Protein CBG01656" /note="contains similarity to Pfam domains PF12710 (haloacid dehalogenase-like hydrolase) , PF00690 (Cation transporter/ATPase, N-terminus) , PF00689 (Cation transporting ATPase, C-terminus) , PF00122 (E1-E2 ATPase) , PF00702 (haloacid dehalogenase-like hydrolase) contains similarity to Interpro domains IPR005775 (ATPase, P-type cation exchange, alpha subunit, eukaryotic), IPR008250 (ATPase, P-type, ATPase-associated domain), IPR006069 (ATPase, P-type cation exchange, alpha subunit), IPR004014 (ATPase, P-type cation-transporter, N-terminal), IPR001757 (ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter), IPR018303 (ATPase, P-type phosphorylation site), IPR006068 (ATPase, P-type cation-transporter, C-terminal), IPR005834 (Haloacid dehalogenase-like hydrolase), IPR000695 (ATPase, P-type, H+ transporting proton pump)" /note="Predicted" /db_xref="GOA:A8WR55" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR004014" /db_xref="InterPro:IPR005775" /db_xref="InterPro:IPR006068" /db_xref="InterPro:IPR008250" /db_xref="InterPro:IPR018303" /db_xref="InterPro:IPR023214" /db_xref="InterPro:IPR023298" /db_xref="InterPro:IPR023299" /db_xref="InterPro:IPR036412" /db_xref="UniProtKB/TrEMBL:A8WR55" /protein_id="CAP22963.2" /translation="MFGCCKKKKTNKSLDELKKDIVIDDHEIPLDALLKRYSSSETAG ISEAEAASRLKKDGPNALTPPKQTSKWVKLAGSIFGGFNFLLWCAAVASAIGYGMDLS MSGDEEVPKDNMYMALILATVVTVTGFFDFYQDRKSGNLMDSFANMIPPKTLVVRDGT TKEIEVKDLVVGDLVRFRGGDRVPADLRVTLARGLKVDNSSLTGESEPQTRNTNFTSK NPLETKNLCLFSTSVLEGSGEGIIIRTGDRTVVGRIAALTTQVDSGPTPLAKEINHFI KIISVVAFTVGVAFFVLAVVYEYPLLKAIVFFMGIVVANVPEGIVPTVTVSLTLTAVK MRKKFCLVKKLQAVETLGSTSTICSDKTGTLTQNRMTVTHLWFDGHIKDAELLPPNEN YHGEKRYLNNDSYQKLLRCATLCSRSHFRVPEFDVPLAKRVVNGDASEVAIMRYCEMI RGDGQVDEFRKTMPKVGEIPFNSTNKYQFSIHPMSEKQNILVMKGAPEKILKLCSTYY HEGETKNVSKKFERDFQKAYETLGSYGERVLGFCDLEMSTTKFPPGYQFNMEDPNFPI KNLRFLGLIAMIDPPRPGVPEAVRVCQNAGIRVVMVTGDHPITARAIATQVHIIEQNE QVTEIVSPDPKCDPASDEIYGKGRLKATGAVVIHGEQLSTMSPKTLKTVVTNYHQNHF FQIVFARTSPAQKLQIVEAFQSVGNVVGVTGDGVNDAPALRKADIGIAMGIAGTDVSK QAADMILLNDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFMSYVLFGLPLP MSIIAILMIDLGTDLWPAISFAYEVPESDIMQRAPRNPIHDKLVNKRLVMFSYMQIGA IQACAGFTTYFVLMMSNGWFPKDLINLSEKWDNKYIDDLEDSYGQQWSYESRKALESC CYGTFFFTIVVTQWADLFASKTRKNSLVMQGLENQVLNTSVIFTCFLATFVLNTPFVN EVLGVQGFRLEIGFLALPFAFAIGLYDEFRRFFIRNYPGGYIYKETFY" CDS complement(join(662009..662062,662143..662371, 662415..662506,662550..663062)) /gene="CBG01655" /locus_tag="CBG_01655" /standard_name="CBG01655" /product="Protein CBG01655" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain)" /note="Predicted" /db_xref="GOA:A8WR56" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="UniProtKB/TrEMBL:A8WR56" /protein_id="CAP22964.2" /translation="MAAELIQLNPGQQVERWKIEKKLGEGGFRAVYRVYDATGKYAMK VEGCNEEIQVLKLEVSVLTELSRRGNRHFCRIEDKGRFKNFNFVVMTLVGKSLEDLKK AGSGGHMSMGCSIGIGIQALEALEDLHNIGYLHRDVKPGNYTIGRLELNEIRKVYILD FGMCRKFTGLDGLIRKPRQAAGFRGTVRYASISCHMQKDLCRSDDLETWMYMQAELSY GRLPWAHISDMNEVGKQKHSIRKNAQKLFPSPCPREFQEIFNYVGKMKYYDTPDYQMI YGHAPYDWEAGGPAAHILR" CDS join(664295..664436,664774..664874,665110..665302, 665348..665466) /gene="CBG01654" /locus_tag="CBG_01654" /standard_name="CBG01654" /product="Protein CBG01654" /note="contains similarity to Pfam domains PF00008 (EGF-like domain) , PF12661 (Human growth factor-like EGF) contains similarity to Interpro domains IPR006209 (EGF), IPR006210 (Epidermal growth factor-like), IPR001881 (EGF-like calcium-binding), IPR013032 (EGF-like region, conserved site)" /note="Predicted" /db_xref="GOA:A8WR57" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR013032" /db_xref="UniProtKB/TrEMBL:A8WR57" /protein_id="CAP22965.1" /translation="MFLKSSILVVLVLSATWIRAEEEMAIYDEVEDVTGNNKTISGEV EISDSKADEKEEKKEKKRAVDEGNSIQEEVKAELDKAVESLKETAKERLEEERERENG LLSRSNLESCGAVDCNHRGTCLGSKNTFICACQLGFSGKTCEETVCDSARDCNGRGLC FGTTNQLTCLCNLGFTGKRCQTPI" CDS complement(join(665566..666039,666086..666331)) /gene="CBG01653" /locus_tag="CBG_01653" /standard_name="CBG01653" /product="Protein CBG01653" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR58" /protein_id="CAP22966.1" /translation="MSRNSKDCHLKLSGQEQISANHSLVPVVQSSSSTSELSSPKSIH QHFYTVNISFNYSTPAQAPPQNAEEALPMISRLVGQQMKDLFKEEKKRRNSSSARRKS TRSSRRLSKEASFPPEVDALPIPIVSEDLPDDVTQQDTEESEMVEIPTRNKPKPKESE YQDITGITRKVRFRLVPSKRVKPVPEDQLPEKKFNKDKKRREYVELGKLHSLEPIQDQ TEDEKRAEAKRRSRELARELY" assembly_gap 666710..671217 /estimated_length=4508 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS 680641..680889 /gene="CBG26442" /locus_tag="CBG_26442" /standard_name="CBG26442" /product="Protein CBG26442" /note="Predicted" /db_xref="GOA:B6IEX9" /db_xref="UniProtKB/TrEMBL:B6IEX9" /protein_id="CAR98459.1" /translation="MTSPSPSGNVVVVGSDGTSSISDRWPPQKPRITPPRVRIDRQFV ATAVPHVLMFLLVCIVFTAQQTRISTLERRIDQLAVQV" CDS join(682098..682302,683664..683698,684042..684251, 684391..684426,684839..684874,685138..685497, 685577..685771,685845..686000,686102..686173, 686270..686428,686475..686591,686638..686820, 686944..686988,687041..687202,687769..687858) /gene="Cbr-col-99" /locus_tag="CBG_01652" /standard_name="CBG01652" /product="Protein CBR-COL-99" /note="C. briggsae CBR-COL-99 protein; contains similarity to Pfam domain PF01391 Collagen triple helix repeat (20 copies) contains similarity to Interpro domain IPR008160 (Collagen triple helix repeat)" /note="Predicted" /db_xref="GOA:A8WR59" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/Swiss-Prot:A8WR59" /protein_id="CAP22967.2" /translation="MCCYLFQQRERERKGTLLTGEAYKLCETITLLDVLQIEQDIPPI GNSDDNSDDVAKSRKVRNSCMCPPGPPGERGPVGPPGLPGLPAPYYRRPRVPLSNVVF VVVIVIVFFKFQNLDESISRKMRAFGMLYSPDGQAIQLRGMPGPPGPAGPKGLRGYPG FPGPIGLDGPRGLPGTPGSKGERGERGPVGPPGFPGPKGDRGVMTGPFGVHGQHPAPS GPIGHHTTMNIGPPGPPGPPGPPGPAGRDGRHGMKGDRGLPGFDGESKIGPKGETGNP GRDGIPGARGPPGERGEKGDTAFLSTYPRGQSVSTVSSSGSQGPPGPPGPPGVCQVSQ CIGVQGPPGIPGEPGRTIIGPQGPPGEKGERGERGETGDKGPPGTPGAASLLNGGKAL VGPPGPPGRDGRPGEKGEKGEHGLRGDMGLPGPEGTPGKRGRRGRHGISLVAPNGTIN EDLKKLLKTELMPLLIEDISELRGKNVIPGPPGPPGPRGHHGPIGPAGERGPQGLPGH SGERGERGDIGPPGLPGQPGAAESSGNQSGPRGPPGLPGPPGEKGDLGPPGLPGQPGA LGLPGHPGPMGLRGPHGTEGKQGKQGPEGPKGYPGPMGPQGPPGNDGEPGIDGRPGPA GEKGDQGIPGLDAPCPTGPDGLPLPYCSWKPMDGKNDVWERRKRATLPRSESVPEERT YIKN" tRNA complement(683363..683435) /gene="CBG28950" /locus_tag="CBG_28950" /standard_name="CBG28950" /product="RNA transcript CBG28950" /note="C. briggsae predicted tRNA" CDS complement(688069..688149) /gene="CBG26443" /locus_tag="CBG_26443" /standard_name="CBG26443" /product="Protein CBG26443" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEY0" /protein_id="CAR98460.1" /translation="MCTRIELGFRNLCDLNWRILWILKNK" CDS complement(join(688621..688697,688860..689136, 689180..689446,689528..689694,689749..690487, 690539..690754,690802..690932,691685..691771, 691822..691858)) /gene="Cbr-daf-1" /locus_tag="CBG_01651" /standard_name="CBG01651" /product="Protein CBR-DAF-1" /note="C. briggsae CBR-DAF-1 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8WR60" /db_xref="InterPro:IPR000333" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/TrEMBL:A8WR60" /protein_id="CAP22968.1" /translation="MHHFLFWLFAFAGVSTFDHDLQGRTNTFIKERLIPVLRERNVRN TNFNRIKICLCSSDAGCTARTKGYIPNIGDGLNASEKALYKNACYTDGNCYQNQQTGS HHDFGCIDSSSKTDETDFHNTASQVCLNITTGDRRSSWVCCDDTNFCSNQTMIVLPDS SPVALGSLKFITIAVVVVFVVIAAIIIVSNRGWFVEYARTQVPMLVKEEKLNKVNDIE TNNHYQSSESFSCDAPSTVLTTLPGFPDPFKMLPMAFQDMLSFLGGSSGTGNCEIELA PASFAKKIMIENQVGFGRFGVVYRATYKHESVAIKVFNESNESSFATELHILNNKLNH PQVLRLIGDDRTDHLLGVRTWIVTEFHEKGSLHEFLDRNTIDMERYFNLMYSAAAGLS YLHDTAPGKSTEEYKPEIAHRDIKTRNILVKNDFTCVWADFGLALAKPANGAKLPENI VKNYKCGTVRYLAPEILNSTMQSSEFESYKMADMYSFALVMWETLCRVEHEGITPKDP SSVLPYGEYTPRDPTDAQMIDVVYKRKLRPTVDQLWTKNKDYKGIMDIISIGWSNNPT ARYTANSLQTKLFYRKKDFTAKNEALKKKMAMLAAQAPFPPPPPAPQPTVSQPYTNQN EESIPMGTIRTNNRVRDSVEQPIINKFGVVDETQEALIPLV" assembly_gap 696033..696713 /estimated_length=681 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(699378..699501,699666..699814)) /gene="CBG01648" /locus_tag="CBG_01648" /standard_name="CBG01648" /product="Protein CBG01648" /note="contains similarity to Pfam domain PF02937 Cytochrome c oxidase subunit VIc contains similarity to Interpro domain IPR004204 (Cytochrome c oxidase subunit VIc)" /note="Predicted" /db_xref="GOA:A8WR61" /db_xref="InterPro:IPR034884" /db_xref="InterPro:IPR037169" /db_xref="UniProtKB/TrEMBL:A8WR61" /protein_id="CAP22969.1" /translation="MVAASATRNMLHQYGRRAIGVSLVAAVGSTAAFFFGYVQPRHEK YERFFANYDPYTRMKEICAANKGYMHTCPQELAKLYEEKGKTVADL" CDS join(700627..700691,700740..700869,700914..701363, 701410..702017,702063..702208,702258..702409) /gene="Cbr-grld-1" /locus_tag="CBG_01647" /standard_name="CBG01647" /product="Protein CBR-GRLD-1" /note="C. briggsae CBR-GRLD-1 protein; contains similarity to Pfam domains PF07744 (SPOC domain) , PF00076 (RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)) (2)contains similarity to Interpro domains IPR012921 (Spen paralogue and orthologue SPOC, C-terminal), IPR000504 (RNA recognition motif domain)" /note="Predicted" /db_xref="GOA:A8WR62" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR010912" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR012921" /db_xref="InterPro:IPR016194" /db_xref="InterPro:IPR035979" /db_xref="UniProtKB/TrEMBL:A8WR62" /protein_id="CAP22970.1" /translation="MQEERGRSAYKPNCNGLSSYYRERFGSHSPEVYMNLRISGFDDH LERDAIKKCLTHELKKFAPFEIKVVKNPEEDERLAYVNFERNDCARKVRYNLMERLKG VLGENVQCDPAGILRDQEGKYIPDRFNRAQGDRKDNGSGGSSGNRNRPSKEPQTWRLK KDDDEATRTLFVGNMPSDVKEREIRSIFEKYGKVEEVDIKTPINTDAAYAFVMFQTVD QAIRAKQHEQDNSIRSQGSRMKIGYGKSQVSRKLFVGGLGDWCHTDTLQKAFGKYGSI ESIELNSRDQFAYILFESTHVSQEAWKALRNVSIARGTPPIVVDYAKDSTAHSEKQQF RKRRASKSPVGANVQRTPPSSPKDVVRNFEELDATYAPTWSGKMALKKTDYPVKFYRV HGAERLVVKLLRDEDDAPLRLLITQRLSLCSQDLLFGKLTSCNSKEISLGVITGKKDL DDLQPLVNYFTNKEAAGVVTVPGGILYIFPFCEFALKLLAEFCPQVHVFNENCPFLLG ALAVRSTD" CDS join(702625..702789,703984..704690,704739..704985) /gene="Cbr-tut-1" /locus_tag="CBG_01646" /standard_name="CBG01646" /product="Protein CBR-TUT-1" /note="C. briggsae CBR-TUT-1 protein; contains similarity to Pfam domain PF01171 PP-loop family contains similarity to Interpro domains IPR011063 (tRNA(Ile)-lysidine/2-thiocytidine synthase), IPR012089 (2-thiocytidine tRNA biosynthesis protein, TtcA), IPR000541 (tRNA 2-thiolation protein)" /note="Predicted" /db_xref="GOA:A8WR63" /db_xref="InterPro:IPR000541" /db_xref="InterPro:IPR011063" /db_xref="InterPro:IPR014729" /db_xref="InterPro:IPR032442" /db_xref="InterPro:IPR035107" /db_xref="UniProtKB/Swiss-Prot:A8WR63" /protein_id="CAP22971.1" /translation="MEKRRGPPPCQSEEGCSNSAKIRKAKNGAQLCGPCFSKSFEDDV HETIINNNLFKRGERVAIGASGGKDSTVLAFVMKTLNDRHDYGLDLQLLSIDEGIKGY RDDSLLAVEKNRVEYGLPLTILSYNDLYGWTMDDIVAKIGKKNNCTFCGVFRRQALDR GAFKIGATKLVTGHNADDMAETVLMNVLRGDIARLERCTNIVTGEEGDLPRAKPLKYC FERDIVMYARSNQLEYFYTECIYAPNAYRGYARKYVRDLEKVHPRAILDLIRSGEKVS VKKEVEMPTLKTCERCGYMTSQKMCKACLLIEGLNTGNTDLGVRKSKKTKKVIVETEG GKKEDGGCGSGGGGCGCAGAADETENEETRKRLKDLQF" CDS complement(join(708517..708666,708712..709183, 709463..709617,709684..710192,710275..710404, 712161..712381,712433..712507,715545..715647, 719054..719223,719525..719631,720525..720550)) /gene="Cbr-tpa-1" /locus_tag="CBG_01645" /standard_name="CBG01645" /product="Protein CBR-TPA-1" /note="C. briggsae CBR-TPA-1 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00433 (Protein kinase C terminal domain) , PF00130 (Phorbol esters/diacylglycerol binding domain (C1 domain)) (2)contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR014376 (Protein kinase C, delta/epsilon/eta/theta types), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR020454 (Diacylglycerol/phorbol-ester binding), IPR017892 (Protein kinase, C-terminal), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR000961 (AGC-kinase, C-terminal), IPR002219 (Protein kinase C-like, phorbol ester/diacylglycerol binding), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8WR64" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000961" /db_xref="InterPro:IPR002219" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR014376" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017892" /db_xref="InterPro:IPR020454" /db_xref="InterPro:IPR035892" /db_xref="UniProtKB/TrEMBL:A8WR64" /protein_id="CAP22972.2" /translation="MTQAENACRLKLLRADVPTDLLPAGCSPTDLQPAVNVKEKIEVN GIFSPNFSGESRLVQKKKTLYPEWEKCWDTAVAEGRILQIVLMFNNTPVVEATMRLED IISKCKSDAITHIWINTKPSGRILAQTRHLKNAPDDDHPVEDIMTSRSNSGPGIQRRR GAIKHARVHEIRGHQFVATFFRQPHFCSLCSDFMWGLNKQGYQCQLCSAAVHKKCHEK VIMQCPGSAKNTKETMALKERFKVDIPHRFKTYNFKSPTFCDHCGSMLYGLFKQGLRC DVCNVACHHKCEKLMSNLCGVNQKQLSEMYHEIKRGTHATASCPPNIANLHINGDTKS NGSLPNKLKNLFKSHQYSVEEQKDTDEYMDNIWGGGDGPVKKFALPHFNLLKVLGKGS FGKVMLVELKGKNEFYAMKCLKKDVILEDDDTECTYIERRVLILASQCPFLCHFIEYL FFVMEYLNGGDLMHHIQQVKKFDEARTRFYACEIVVALQFLHTNNIIYRDLKLDNVLL DCDGHIKLADFGMAKTEMNRENGMASTFCGTPDYISPEIIKGQLYNEAVDFWSFGVLM YEMLVGQSPFHGEGEDELFDSILNERPYFPKTISKEAAKCLSALFDRNPNTRLGMPEC PDGPIRQHCFFRGVDWKRFENRQVPPPFKPTIKSNSDASNFDDDFTNEKAALTPVHDK NLLASIDPEAFLNFSYTNPHFSK" CDS join(721522..721613,722129..722205,722535..722635, 722713..722802,722849..723010,723140..723235, 723285..723400,723881..724085) /gene="Cbr-scl-23" /locus_tag="CBG_01643" /standard_name="CBG01643" /product="Protein CBR-SCL-23" /note="C. briggsae CBR-SCL-23 protein; contains similarity to Pfam domain PF00188 Cysteine-rich secretory protein family contains similarity to Interpro domains IPR014044 (CAP domain), IPR002413 (Ves allergen), IPR001283 (Allergen V5/Tpx-1-related)" /note="Predicted" /db_xref="GOA:A8WR65" /db_xref="InterPro:IPR001283" /db_xref="InterPro:IPR002413" /db_xref="InterPro:IPR014044" /db_xref="InterPro:IPR035940" /db_xref="UniProtKB/TrEMBL:A8WR65" /protein_id="CAP22973.2" /translation="MKEKRRLLMKRMQIAETAAIETRTVVGSEDGTTWQFGFKGLFIA ATVIFLSYNILSMTNPRPSRFSIITKMAPQHCGLNLPARIQNLILDKHNEIRSKVALG QYDVDDGHLPPAANMPKLMWDCQLELEAQNRAQECNLGMEKLTEEMAGLEEVRGENAF YFRTDSLDYSDAVVKGIERMGDEIAIAGIKQLRMDRYDKRIGHATQILWGETRKLGCS VQECAARSDGSLEGQKYKVAVCKYYPTGNVFKTSTPTSIYTVGDVGSSCSEGTFIDPT SGLCVEATWHERAKEEEEEDALKSQGVYKRIDQDAN" CDS complement(join(726510..726565,726638..726887, 728049..728102)) /gene="CBG26444" /locus_tag="CBG_26444" /standard_name="CBG26444" /product="Protein CBG26444" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEY1" /protein_id="CAR98461.1" /translation="MDEYPGSYGCISWKFDPMNPGLGFPDSARSFFKGLMAYMKNQRA ARLGFFKLKILNFQIKKRKDRNKMTVNPSHTNPGRSKKVLKKYFLKTTSLFSPLIIWF QKVVIITHPSDLGRSSS" assembly_gap 734054..734063 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" tRNA complement(736081..736152) /gene="CBG29005" /locus_tag="CBG_29005" /standard_name="CBG29005" /product="RNA transcript CBG29005" /note="C. briggsae predicted tRNA" CDS join(741048..741136,741188..741272) /gene="CBG26445" /locus_tag="CBG_26445" /standard_name="CBG26445" /product="Protein CBG26445" /note="Predicted" /db_xref="GOA:B6IEY2" /db_xref="UniProtKB/TrEMBL:B6IEY2" /protein_id="CAR98462.1" /translation="MPRRQKDVEREALQMDYHFEHHRQNSYRYSIYAGLLCTFPFLIL FALFFYFFWFGRR" CDS join(744035..744214,744263..744966,745015..745210, 745260..745916,746421..746496,746891..746965, 747056..747192,747239..747313,747361..748128, 748404..748546,748592..748743,748821..748991, 749075..749271,750611..750764,750812..751140, 751344..751514,751548..751875,751923..752149) /gene="CBG01639" /locus_tag="CBG_01639" /standard_name="CBG01639" /product="Protein CBG01639" /note="contains similarity to Pfam domains PF09380 (FERM C-terminal PH-like domain) , PF00373 (FERM central domain) , PF09379 (FERM N-terminal domain) , PF00595 (PDZ domain (Also known as DHR or GLGF)) (2)contains similarity to Interpro domains IPR019748 (FERM central domain), IPR019750 (Band 4.1 family), IPR018980 (FERM, C-terminal PH-like domain), IPR001478 (PDZ/DHR/GLGF), IPR019749 (Band 4.1 domain), IPR018979 (FERM, N-terminal), IPR011019 (KIND)" /note="Predicted" /db_xref="GOA:A8WR66" /db_xref="InterPro:IPR000299" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR011019" /db_xref="InterPro:IPR011993" /db_xref="InterPro:IPR014352" /db_xref="InterPro:IPR018979" /db_xref="InterPro:IPR018980" /db_xref="InterPro:IPR019748" /db_xref="InterPro:IPR019749" /db_xref="InterPro:IPR029071" /db_xref="InterPro:IPR035963" /db_xref="InterPro:IPR036034" /db_xref="UniProtKB/TrEMBL:A8WR66" /protein_id="CAP22974.2" /translation="MPAQEVQISIAEVIEVRGYGLNAPELLSVAVSASDRLPPCPKGN VFDTENVFLSSKGQIEIKTVPTSRVDRSFVPPEWAKGEEDPQAAAVYCLGAVLRAAGA EEAADVDLFSLVNILTVAMTGTRPTAHRMGQMARNQLRGRDPASMLMCIYEELMGDEE TNQIDVGDLDDLDDDFLSTNGMERHDSEMTGQVVFSGNNNVKRAVEYFEDDGREDALT STSSGNSTQKESSPFTDFDDSPPAPSRVNGVGEVRPYSPNHFLDSTLGGIGSPISQST RFDETYIEEYSIELDTSGKNSTQPGPKSPFDDNFADTPDPVVTPAIKVQEETRPDVNP FDEEEEEEDPRFGGGTLSGRDPFDEDSGNSNKVDVREKRFHKKEQLVHRLSSSSEEIV EASIHEDEPIVMAQIPEEEKPKPKPIPAFDNAYDADFDNSPPLHHYSAVPMETGLSPL EEAQRALRANRARHKPSNVSMAEDAKVATRQRYSNASDFGETKKMRKEEEGVDETDEA TVPAPVIPVIPILRREQSADEEPKSVRPPRYRKSREIEEPVVVEKPARFQEVEEETEE KEDIDAIFETYRKESGPIEAKSPTPILTADEYKEPAKQAILIRFRVHTPMPSDTLKLA HHLLALPAPVVVAHESPILKRRNSLLPSRISGRQSTRRSVTSVRSMRGKRKTRAIPEF FDLTRHQNIRLRAPMSKKKRLSLHRVEDTEVVVELLNGQKVEVACRSDVISRDVFSLI VQNMNINEHVFFGLSFLRDGEHYFIEDHQRLEKFAPSGWKSVARVGVKVPYVLHLRFK FYPQILDFIKTDVTMNELYLQCRRDVLEERIQPKRDAAFELAALALQAEFGNRPPPVI TDYFDIQHYLPKKYSSFEDQTRLKNILAELHGHYAGTRISEAKHKYIQICQRHADFGA HIHRVFRTKPTSSHGASPFDPDTGSTLWIGIMPRGISIYEQQGGAREVIAEHIWPQTQ TLQFDKKRFVIVAVGSHDQQIESTFYTDHHSKSSYFVRFAASQHRWMMKMRQWKSTLR HENTISSMPDVIVEGQVVPPAPIRQSLQESPPATPLLDSADKLFTKISTIEKPVARPA EMPPPAPTNLAAQYDTVDEGIVCDSQAENFERVSPNTNGNVTPRAMQFDVLLTKDPAN GLGLTLVDGNLNGVPGVYVKLVADNGAGMKAGVCVGDRIVQVGTESMEGQDRLYAVEL VKQCGNLVPMTIARLDGLIRHQKDVSAEMLASAARKKSFTSSSGDLLNAPKNGSGQSR TPPAPRRAANRRQRAVSDFGAIGDALPTLDGDNLINIKAISGLHLDESDEEKGEYRLP TTSMYAFDRDDDLQQSIKETKKPIPEPKTGELRKYRYARRSNLEIAEEIEEEPADSSD DDGQIDDSKRVIDVRNIVELERNENGSLGVQIASLGGRVCIKQLTSEPAISHPDIRVG DVLLYVNGIAVEGKVHQEVVAMLRGGGDRVVLGVQRPPPAYSDSVHSSSAASAPLISV MLQKKPMGTLGLSLAKRTMSDGIFIRNIAQDSAAAYEGNLRVGDRLVSLDGEPVDGFT PATILEKLKLVQGPVQITVTRDSASDR" CDS complement(join(749532..749549,749586..749708, 749765..749915,749969..750117,750405..750515)) /gene="CBG01640" /locus_tag="CBG_01640" /standard_name="CBG01640" /product="Protein CBG01640" /note="contains similarity to Pfam domain PF02434 Fringe-like contains similarity to Interpro domain IPR003378 (Fringe-like)" /note="Predicted" /db_xref="GOA:A8WR67" /db_xref="InterPro:IPR003378" /db_xref="UniProtKB/TrEMBL:A8WR67" /protein_id="CAP22975.1" /translation="MIGVFLVFLSQISLALASSPQTIFCLIHTATPSHETRAKTILET WAQYCDDYLFFTDSKMNSSIPHIYYPLLNSRDHSWEKIRRVFKYVHDKIEKKYDWYYR ADDDTYALMHNMRTLLANYTSSKQHYLGLRWNFFASRGFNDGSSYILSRPTVEAFNEV MLDPDRCPDHHRAEEDQELFSVS" CDS complement(join(752668..753101,753148..753257, 753302..753373,753423..753687,753735..753813, 753858..754226,754282..754458,754502..754642, 754684..754891,754937..755086,755131..755296, 755341..755446,755491..755577)) /gene="CBG01638" /locus_tag="CBG_01638" /standard_name="CBG01638" /product="Protein CBG01638" /note="Predicted" /db_xref="GOA:A8WR68" /db_xref="UniProtKB/TrEMBL:A8WR68" /protein_id="CAP22976.1" /translation="MATDERTFLNLDQFVKNQIIAIIDDYKLVYKIPIPNLNTDPSND TLNIYTKIRELLLCGIHINIEDLFKKDINSFRMVLAAFFGERNALVLTPKAETPETVA PEAESPETEAPVKTKTYTLQKTDLLPNCQHHLHTIMVMCYAADVMQKEIQKLDNRIVM KKDKYFKLKDKLQEQACNMINHLYCLETNGPENAIAALQEDCHLSWTNKNINSRYRDY LNGKFNRNQEIMAIAYKADAMKFLSQKPCLLLIDERYNIRKTMETNVTANHEKQGTLL NMNGKLWVHGLSRLVYILAFAYTLCRFPIYGDTRSFSKRSWFELLVFVYIIMVLIAQI GMTIIKIIDYLIYEGSLHEFRRQKKDEKKKWADIITNAKNNKYGKLIFKYYDNNRLAM FRIALVVPLLVLEAARFTYFSISLDMHIEWYGTSVLPPIAHEILYCLLFAITTISSIR YFYSLQLVGFFAHIIWKMGKTVVMFTSIFFVFWFVLAVIHVSISRSFIVSDDTLVHKV SSVGKFEIFGEVQDEDRIGILTNCSQFNRSIHHLFDMEYVEASCLFRSSLLPFLVFAY IFITSVLLVNLLTAQLTKEYENESKKSRYYYGWLRYGQLAKIESKINLPPPFSLVYLL SRLIVWLFTVPCVSRNATNYDLTHFWCQIERKIRSGYTFIFDAIWKYGVLVLEGHPWG TVYKIPIDVETDHNKDMKNFLDNPPSEIWEQLKDVINYYEQKQLTLKKLTKAQAKLNG MIEQKKNKENERLRMLSRAEVPEDRSATPAPTRDIPSLSQSMKSGIF" CDS complement(join(756229..756763,756811..756882, 756929..757193,757241..757319,757367..757732, 757778..757954,758118..758177,758225..758435, 759142..759291,759337..759448,759493..759586, 759631..759726)) /gene="CBG01637" /locus_tag="CBG_01637" /standard_name="CBG01637" /product="Protein CBG01637" /note="Predicted" /db_xref="GOA:A8WR69" /db_xref="UniProtKB/TrEMBL:A8WR69" /protein_id="CAP22977.2" /translation="MPEEAVEINDLKDKPSAHREKIIDIIQVYEHRYKIFSQMNIPKK CDIFDKIRTILSIDLSIEIEQLFENDYYSFSMILAAFYRQKYALEIPRREVPSSSVPY PEKDLLSECQHPLHTVLVMCFAAHEMKKMVVKDDFGQTLLQEKYESLKEQLEEIACSI VNNFYSNSMHGLIQIREALQADYKSKFPETERKMTPYEEYLYKKFDKSKEIMTVAYKA KAMKFLSQKPCLDFMRVRNKCRKFFRGVYIAMFAYMLCKFPVYDDLDMSAELEWKESI PYIYVLLVLIAQVSMTIFKATDYLRFHAFKSTRAPRTEDPKNRFGWKRNKLNLLRPYF KSNRLALFRIFLVVPLLLLEAIQFVIFTLKRNKALKADEKFWYGAWVLIPIILELLYC SLFAIATVSSLRFFHFVQSLGFFVHLFKKMWKTVGMFVLIFCTFWFVLAVIHVSISRT FVSSTNTIFYTVTSQGKFEIFGEVQDDDRVGNILDCGHFNRTVLDFFNMDYIEASCLF RSSVMPFLVFIYIFVTGVLLVNLLTAQLTKEYEKESEKSRYYKGYLKYEQLAKIESKL YLPPPLSLIYICIRLIFYFFAGICFLINLVTSCCGWSFLFPKCSRFFYMTIISKLEGY PWGAVRDSTDDHGTEKAIQDYLKKSPDDIWEKLKEVVNMYDRKILDVENLINLRKDID SFLDKQVDEERARSHSAIGTAIGFVSTTQSRQINRNSTIKFLEDDPSSEMNIPTFA" CDS complement(join(760433..760710,760758..761046, 761150..761212,761266..761400,761908..762495)) /gene="Cbr-lgc-22" /locus_tag="CBG_01635" /standard_name="CBG01635" /product="Protein CBR-LGC-22" /note="C. briggsae CBR-LGC-22 protein; contains similarity to Pfam domains PF02931 (Neurotransmitter-gated ion-channel ligand binding domain) , PF01549 (ShK domain-like) contains similarity to Interpro domains IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding), IPR003582 (Metridin-like ShK toxin)" /note="Predicted" /db_xref="GOA:A8WR70" /db_xref="InterPro:IPR003582" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR006202" /db_xref="InterPro:IPR036734" /db_xref="UniProtKB/TrEMBL:A8WR70" /protein_id="CAP22978.2" /translation="MLRLLILSTSLVTAAWAAGSAVGCEDADPKCTEWASTGECSTNA VWMMANCRKSCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRIESVRINNVEIDERR QNVKVFGRFVLSWNDTMVSWDKEQWGLSWLNFYWIQIWTPNIVQINGGSTSNPGQVTS KVLAANYTGQIYLWSDFSFTTPFRFQYEDYPNDVQRVCYKFDDKRLLAVHFTVADGVK NKEREATTDPYVSGWKIEDVEVVSITHSPDNGGVGPNGLASFPSESPYTVEQLSDPRR NPFDVQADNGEICISLRRNAVYFTSEMLLPALITSLFTLAAVFFQLSKTQPILLGFSV VAQILSLILVSQRLPSFTAHTPTILKYAGFNMTWTAILFVVSLVLERMATSQVDIPPP HSVSTFSGLVNKILPIPKNSKHEDSSLQYAAFAHALNHVIFALSTVLYFVVILFSFVF " CDS join(764648..764866,764916..764984,765041..765147, 766112..766239,766286..766641,766874..767050, 767096..767155,767199..767330,767383..767506, 767552..767675,771041..771225,771272..771431, 771477..771591) /gene="CBG01633" /locus_tag="CBG_01633" /standard_name="CBG01633" /product="Protein CBG01633" /note="Predicted" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8WR71" /protein_id="CAP22979.1" /translation="MGCQVSSDGSHFERSDYDKLWKRMNSVTDPYSSPNTGNNKKKKQ KQTGWKTMRVLLVTTYKDFRNERRAVLDLVENKLQSIASEKQIVLQVEDFNWGSKAHL EDASCLYLIERLCREASASSSNFFYLHFLGECAGYIIDHTFTDESFLRQHAISSEQSY SEVFLQLAGLQNPSSIFLYRNPSFHQELPFNVTNFIDSPVNRERTKYLTSMVKGAVAP FKFIEYSVRTSGINNTHFKHIMFDDLSGAIKPIEDLITKKLDSLPDIESTSIPTTEDF MRDYYADMKLDQELLTKLECNIRSRKSTLLVGEYCTGKTAILQRIQRKYDESVLIQAK EKMSAAELRREIESKTKVILHDVEHKLVRYLLVDDVHLATKEAQQFLVGNEELVIIAT SRKRKIDVEMDRLIIQHPDPEEILDQLSFWLNGGTKEKTGVPSVKASNILKMSQQKRR RSLGNVEDGHQPDENIGWNSLKCRVIGTLGRLGSSDEKCAQLSQLSTLSVVEADICLM ESDGKGHLLISTICFLTIVETGLNEIELRSLLVTEYNLLPIGIRRNYRNLPFDYCPDD FGTTACVQMPPLRWYFVLHRLSHIFMKIDPDSNHFVLPAACRRVVTKKFLKHHHNMEH FKKLLKTFMTTFSSREWNRNRQIGKFI" CDS complement(join(770207..770436,770493..770616)) /gene="CBG01634" /locus_tag="CBG_01634" /standard_name="CBG01634" /product="Protein CBG01634" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR72" /protein_id="CAP22980.1" /translation="MSSSSSLRKIFVFLGLVAIVAAQWGVNSGLGLGVGPARVGANVN GGGYGGRGYGGNGYGNGYGNGYGNQGYYGNQGGYGNQGYYGNQGGYGGGRGAYGNVGL GVNPGVGGMVGGLLG" CDS complement(join(771682..771900,771952..772557, 773592..773807)) /gene="CBG01632" /locus_tag="CBG_01632" /standard_name="CBG01632" /product="Protein CBG01632" /note="contains similarity to Pfam domains PF00097 (Zinc finger, C3HC4 type (RING finger)) , PF00071 (Ras family) , PF08477 (Miro-like protein) contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013684 (Mitochondrial Rho-like), IPR003578 (Small GTPase superfamily, Rho type), IPR001806 (Small GTPase superfamily), IPR003579 (Small GTPase superfamily, Rab type), IPR020849 (Small GTPase superfamily, Ras type), IPR018957 (Zinc finger, C3HC4 RING-type)" /note="Predicted" /db_xref="GOA:A8WR73" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR018957" /db_xref="InterPro:IPR020849" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8WR73" /protein_id="CAP22981.2" /translation="MMIATKCPSRQSHSDYYSVGSSCSSSCSEDEAPPFLDQELKPLV DASTTTQPEDLSSLPVGVCPQCLQIFEQPVSLQCGHSLCLMCCNHLLFSVKPVTTAHL NRQRPRMGISQRAPSTIPGSNGIVMYRTPKCPVCCAPPSRAGPVPNLALDHLLRNMRT FRWNQIEKDVSSRGSRKWDDGPIQDCRIAVLGSAKVGKTCFTMVQNGNEVMFPDLHSE SEDADAYMIEIADGISVERACIASSGIIIMYSVVDRQSFYHAAEIFKKLENEREHNQP IILVGSKKDVRGKRVVTSLEGQQLARTLRVPFMEVSSKYNDCVFDTFEELVSMIQKQN AAFKNVVKQIIV" CDS complement(join(779694..780152,780234..780351, 780585..780800,780855..782077,782448..782630, 782677..782769,783346..783557,783603..784069, 784119..784234,784276..784332)) /gene="Cbr-gcy-23" /locus_tag="CBG_01631" /standard_name="CBG01631" /product="Protein CBR-GCY-23" /note="C. briggsae CBR-GCY-23 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00211 (Adenylate and Guanylate cyclase catalytic domain) , PF01094 (Receptor family ligand binding region) contains similarity to Interpro domains IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR000719 (Protein kinase, catalytic domain), IPR018297 (Adenylyl cyclase class-3/4/guanylyl cyclase, conserved site), IPR001054 (Adenylyl cyclase class-3/4/guanylyl cyclase), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR001828 (Extracellular ligand-binding receptor), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8WR74" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001054" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR001828" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR018297" /db_xref="InterPro:IPR028082" /db_xref="InterPro:IPR029787" /db_xref="UniProtKB/TrEMBL:A8WR74" /protein_id="CAP22982.2" /translation="MRLLLIFLLFFSQECLAIKVKVAHIGAVGAMKNSEKILQLSKEQ LIQEGVLGDDFQIEILNQMGCGESYEGVAVGADMYHAQGVRAFIGPYCNAELDAVAKM ATFWNVPIVGYMASSNSFADKSIFKTLARVSLRTTNSLAEAAAALIKHYGWNKVAIAT NTGAVAFERIQAFEEVFHQRGVNVVRKIMLDEYTNAKAIMNSGLLQELENSARVVVCA FSSTRDMTKEFMQAVTLSGMNNANYAWILPWLQIETKDAAPWLGDDGEYQQNVKDHFA NAFIVSTIIDDVNGFDNTLVTPFKEKLEANGYSTDDLEMKNIYGYIHLYDALRLYALA VRATMNETGNENAYLNGREVWNHMRRITFPGLVSNAGVTSGTLEPVLLNNCDGTKTGN GCYELQITDLSTGFWPSIDGTLPPDEPVCGFRNEKCDYTMMIIGGCVIIFIILLIISG FFISRVCENRALANTPWRIWRDDFRVIQEDEMKSMLSIGSSKTKMSNMSMFVKHHAVV GTNTHASFHLYPQRRPIVFNRQDLQLLNQMKQAVHDNLNPFLGMSFNEKEEMVVLWKF CSRGTIQDMIYNQEVVLDAKFHGAFIRDITLGLEYLHSSIIGYHGSLTPWSCLIDRNW MIKLTDFGIANPLERWEKMGLISTETLKEGDDKSGSAQKTSILYQPPEMLKNRESNRL RRMDQSWVKQSQARRQMGDIYAFGMVMHEILFRALPFPNGTNISEVLDYIRDGTRNFR PTIHDRTQIHPDLVALLLDCWNENPEVRPSIRRVRLNTENYLKVKGSLVDQMMRMMEQ YANNLEKLVAERTGMLEEANVRADKLLSQLLPKYVANELKMGRSVPPKTFNMASVMFS DIVGFTTICSSSSPLEVVSMLNSIYSKFDDAINKHSAYKVETIGDAYMIVSGIPEENG NEHIRNICNTALELMLLLKTYEIPHRRNVKLRIRLGIHTGTVAAGVVGLTAPRYCLFG DTVNVASRMESTSEPEKIQMSQEARDFCLRYYQEFQIVLRGVVEAKGKGPVTTYWLLG KQSESQMQQKNFSQLGI" assembly_gap 782097..782437 /estimated_length=341 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(786428..786652,786701..786802, 786849..787372,787447..787564,787613..787744)) /gene="CBG01630" /locus_tag="CBG_01630" /standard_name="CBG01630" /product="Protein CBG01630" /note="contains similarity to Pfam domain PF00557 Metallopeptidase family M24 contains similarity to Interpro domain IPR000994 (Peptidase M24, structural domain)" /note="Predicted" /db_xref="GOA:A8WR75" /db_xref="InterPro:IPR000994" /db_xref="InterPro:IPR036005" /db_xref="InterPro:IPR036390" /db_xref="UniProtKB/TrEMBL:A8WR75" /protein_id="CAP22983.2" /translation="MVKKDSESSCCSNGSHDHEDHTLSNDAVVTKYQVAAEITNAVLK EVIANIKEGAVVGDLCDIGDKMISERTGKLYKKEKNFTKVVLKNGQVVKIDLGVHIDG FIATAAHTVVVGASKDNKVTGKIADLLRGTYDGLEIAIRSLRPEASNTDVTRNIDKTA SEFGLTPIENMLSHQLERNEIEGEKKIIQNSGEKQKGEVEKVTIDKHEAYAIDILFST GKGQPKDMDTRTTVYKKNESVSYQLKMKASRVFFSDVNKQHGPMPFSLRSFEEEVKAK MGVVECEKYGLLTPYPVLYEKEGDFVAQFKATVLVMPNGLLKIAGLPFDSDVYQSERS VQDADLQTVLKSALKPKKKKEAKKEEPAAKKA" CDS join(789553..789684,789733..790449,790495..790596, 790645..790869) /gene="CBG01629" /locus_tag="CBG_01629" /standard_name="CBG01629" /product="Protein CBG01629" /note="contains similarity to Pfam domain PF00557 Metallopeptidase family M24 contains similarity to Interpro domains IPR004545 (Proliferation-associated protein 1), IPR000994 (Peptidase M24, structural domain)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:E3CTV9" /db_xref="InterPro:IPR000994" /db_xref="InterPro:IPR004545" /db_xref="InterPro:IPR036005" /db_xref="InterPro:IPR036388" /db_xref="InterPro:IPR036390" /db_xref="UniProtKB/TrEMBL:E3CTV9" /protein_id="CBX33018.1" /translation="MVRKDSESSCSSDDSHNHEDHTLANDAVVTKYQVAAEITNAVLK EVIANIKEGAVVGDLCDIGDKMILERTGKLYKKEKNFTKGIAMPTCISVDNVICHFTP LKSEGPVVLKNGQVVKIDLGVHIDGFIATAAHTVVVGASKDNKVTGKIADLLRGTYDG LEIAIRSLRPEASNNDITKNIDKTAADFGLTPIENMLSHQLERNVIDGEKKIIQNSGE KQKGEVEKVTIDKHEAYAIDILFSTGKGQPKDMDTRTTVYKKNESVSYQLKMKASRVF FSDVNKQHGPMPFSLRSFEEEVKAKMGVVECEKYGLLTPYPVLYEKEGDFVAQFKATV LVMPNGLLKIAGLPFDSDVYQSERSVQDKDLQTVLKSALKPKKKKEAKKEETAAKKA" CDS join(792269..792385,792431..792514,792619..793039, 793085..793188) /gene="CBG01628" /locus_tag="CBG_01628" /standard_name="CBG01628" /product="Protein CBG01628" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR77" /protein_id="CAP22985.1" /translation="MWTFTAFSSILLISSSLAQPIFLPPPPCFGVGCAPPPPSFVIGP APPPCVGIACGPPPCLDCPPPAPIFVAPPPPPCLSFPCPPPPPCVGVACAPPPPIVIA APPPPPPCFGPACPPPCFGPACAPPAPIIVNAPAPPCFGPACPPPCFGPACAPPAPII VSAPAPPCFGPACPPPCFGPACAPPPLFIPPPPAPILFGSVSCCAPNNYSCCGSLFRK RLFNKRSEKETTTAAPTEEPKEN" CDS join(794479..794773,794823..794914) /gene="CBG01627" /locus_tag="CBG_01627" /standard_name="CBG01627" /product="Protein CBG01627" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR78" /protein_id="CAP22986.1" /translation="MHSATLLALLALAAGASAQCFGGGCGGPIFLPPPPCFGGNCGCS GNNCGPQVTVVQVPNNNNGCSCSPCSGPICAPMCNSCPPPPPIFIQRSSCCNQNNFSC CPFRFRRHNTAAETIEEATTAAPTQE" CDS join(796063..796375,796419..796510) /gene="CBG01626" /locus_tag="CBG_01626" /standard_name="CBG01626" /product="Protein CBG01626" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR79" /protein_id="CAP22987.1" /translation="MQSTTLLTLLVLVAGASAQCFGGGCGGPIFLPPPPCFGGNCGCQ GNNCGCSGNNCGPQVTVVQIPNNNNGCSCNPCSGPICPPVCNSCPPQPIFIQQPSCCN QNNFSCCPFRFRRHNTAAETTEEATTAAPTQE" CDS join(799608..799872,799918..800006) /gene="CBG01624" /locus_tag="CBG_01624" /standard_name="CBG01624" /product="Protein CBG01624" /note="Predicted" /db_xref="InterPro:IPR007112" /db_xref="UniProtKB/TrEMBL:A8WR80" /protein_id="CAP22988.1" /translation="MQSISLIALLVLIAGASAQCWGGNCGGGCYGNNCGCNGNNCGGQ VTVLSIPNNNNGCSCNSCYGNGCAPRCSYCPNNFGYSNSCCNNNNFSCCGYRFRRSSA PAIASETSEGVVDSN" CDS complement(join(800157..800194,800238..800280, 800332..800364,800408..800551)) /gene="CBG26446" /locus_tag="CBG_26446" /standard_name="CBG26446" /product="Protein CBG26446" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEY3" /protein_id="CAR98463.1" /translation="MTTRFLLILLLLGAPALGCFGPSCTKIIFQRPCMQPVCRCTTVT CFRKYFLLPPPPPPPIFVQTVQRSCCTLTNFSCCRTFYGKK" CDS join(803326..803363,803506..803666,804051..804228, 804274..804371,804423..804634) /gene="Cbr-zip-11" /locus_tag="CBG_01622" /standard_name="CBG01622" /product="Protein CBR-ZIP-11" /note="C. briggsae CBR-ZIP-11 protein; contains similarity to Pfam domains PF07716 (Basic region leucine zipper) , PF00170 (bZIP transcription factor) contains similarity to Interpro domains IPR011700 (Basic leucine zipper), IPR004827 (Basic-leucine zipper domain), IPR011616 (bZIP transcription factor, bZIP-1)" /note="Predicted" /db_xref="GOA:A8WR81" /db_xref="InterPro:IPR000837" /db_xref="InterPro:IPR004827" /db_xref="UniProtKB/TrEMBL:A8WR81" /protein_id="CAP22989.1" /translation="MWPPVAEDHCNYSYQEHAALNPHDHYHHHHYPHSSAHHLECYQT LSCPSDLPVETSYYNTIPPTYQDLGQTDLSPQFWCAEVDCAHERCAKKDIPHEQSKIF EEISKECDHILNNSEECDKCKIIQHEDGAQEAIPINDLVDIVMQTVDNLKKNEPSQEE TKMLSRKREQNKVAAARYRDKQKAKWQDLLDKREVEEKRNVRLKKQVEKLEKEVAEAR QAFLQKVTQK" CDS join(805680..805917,805963..806045) /gene="CBG01621" /locus_tag="CBG_01621" /standard_name="CBG01621" /product="Protein CBG01621" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR82" /protein_id="CAP22990.1" /translation="MQFITHIALLVLIVGASTQCWGGNCGGGCYGNNCGPKVTVVSVP NNNGCSCNPCFGNGCAPRCNYCPGSYGYSSCCNNNNFSCCGFRFRRAVESAKEASDAV ETSV" CDS join(806648..806750,806794..807006,807051..807213, 807261..807426) /gene="CBG01620" /locus_tag="CBG_01620" /standard_name="CBG01620" /product="Protein CBG01620" /note="contains similarity to Pfam domain PF01549 ShK domain-like contains similarity to Interpro domain IPR003582 (Metridin-like ShK toxin)" /note="Predicted" /db_xref="InterPro:IPR003582" /db_xref="UniProtKB/TrEMBL:A8WR83" /protein_id="CAP22991.1" /translation="MSLKLAFFVGLVGLAACQNATRAPGSYCKGQSRSECFMGSCPSG FECIGNQCCSEADVVQPGGDCTDYLSDCSNVECNSIGMQDFARANCARTCNMCYSSAS VSPQYACTDLLTDCANRMSSCQDIDFVDMMALYCPRTCNLCLWQAATKIPNCGNQLPD CATRGNFCSATSVSLYQKRVGCGNTCGLCSSAPSTPATVQLSTNSNGFLFFGRK" CDS complement(join(807631..807832,807885..808031, 808082..808314,808361..808488,808540..808782, 808828..808998,809077..809176,809275..809373)) /gene="CBG01619" /locus_tag="CBG_01619" /standard_name="CBG01619" /product="Protein CBG01619" /note="Predicted" /db_xref="GOA:A8WR84" /db_xref="UniProtKB/TrEMBL:A8WR84" /protein_id="CAP22992.2" /translation="METDYEGGMPNCTYRYPFPPEKDTISAYALLIDGPCTCLAALLS MIGARYAIKFLCRAGLNKELTAALFALCAIDSLLLLTVFLFYGIEAMSVLFFRTNIMY DKQDFTYNLHGIASSLTTASVYSTGYLHHFPPVHGCCTTSPICTSMASNHRRTGSKAV RKGSAAQLEDSVTTNTTFSRGTFNSSSIKRHYNLREMIRPFYTPFLFILLSFSVNIPI FFEFTTTKCFDVEHNAEATNPEATVFRSSFAKYKAVLMTLTQTIGPVSIILVLSILTE YKVHMSLKARRKLFESQQRSRSVVLSEELKERVSRTVAVFIAVKFLIFRTMPIFFDVY ENLYGIDGWGTVMSIMVRVSDFGIVLNTATNSLAYFGKKRWIEKRLRLRLMKKEEKRN AKATLSVHGGNSLNASMKKLTPSKLGLPHPLSAEKTPLNSKNIYPEMV" CDS complement(join(836471..837129,837655..838288)) /gene="CBG01616" /locus_tag="CBG_01616" /standard_name="CBG01616" /product="Protein CBG01616" /note="Predicted" /db_xref="InterPro:IPR035127" /db_xref="UniProtKB/TrEMBL:A8WR85" /protein_id="CAP22993.1" /translation="MAHGHHRRRRPAREVYFKLSAKDSKQAHLFSLKYEKTSGLLEKL KGKLTEYKVDFANVFWIDHDKDQIFLQTVEDLREAIKFSRFVVKLYVETPGEKKILKT EEDDDGKSSSSSSFSKVSRREEDVSSESESSSSESESSGDDDDKGGKKPRGRSVSSSS SGSSSSSRSSSQSSRSPSRGRRGHGSRSPSGSPERCEKKKKEDLKAMKGQKDEHRGHH EKHGHHHGPRRDNGSRSPSPPGPPGCHRRYWRHGSHGRHGSRSGSPGGHGGHHHGPPG RHEHHHGPPRKHGRHGSRSHSPRGRHGHHHGPPPCPGRHGHHHGGRHGPGGRGRSGSR GRHGPPCPPPWPHHHGHHHHHGRCPSPGHRHHHHHGCHPPFPPFPHHHGHHHHHHCPP FWPPHRRGHCHHHGRHGHDHGHHDHGHHGHHGHRSFSP" CDS complement(join(838856..838945,839048..839397, 839444..839635,839745..839838,839895..840242, 840291..840491,840538..841116,841165..841281, 841330..841412,841459..841519)) /gene="Cbr-pig-1" /locus_tag="CBG_01615" /standard_name="CBG01615" /product="Protein CBR-PIG-1" /note="C. briggsae CBR-PIG-1 protein; contains similarity to Pfam domains PF06293 (Lipopolysaccharide kinase (Kdo/WaaP) family) , PF07714 (Protein tyrosine kinase) , PF02149 (Kinase associated domain 1) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR001772 (Kinase-associated KA1), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR010440 (Lipopolysaccharide kinase), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8WR86" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001772" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR028375" /db_xref="InterPro:IPR034673" /db_xref="UniProtKB/TrEMBL:A8WR86" /protein_id="CAP22994.2" /translation="MSKYEVLQGFYAVHDELGSGGFGKVRLATHLLTNQKVAIKIIDK KQLGHDLPRVQTEMDALRNLSHQNICRLYHYIETEDRFFIVMEYCSGGEMFDYIVRKE RLEESEARHFFRQLVSAIAFVHSQGYAHRDLKPENLLLTEDLHLKLIDFGLCAKTEKG RIDKHHLDTCCGSPAYAAPELIQGLPYKGNEADVWSMGILLYTLLVGALPFEDDNMQI MYKKIQSGCFYEPDFLSPMSKQLLRAMLQVIPERRITIKKLLEHDWLNHKYTQPVKWN TIYDKNFIDRDVARVMARYYGLETTDKMIEKIKEWKFDYMTSTYYALLHRKRNHLEII LPMTRNATNTAPVNVQNILCSPTIHASLDNNLDKSGLEDGDSSSDPSSISPSDIAAQL KKSCDVSDGKSKFAKPLSPESKKMSYVNAMLAMPSQFTGRSPLRIPESPVSVHSSDTA SLGSSTPSRGVSRDTDKENTGNNKNYRMGAATCKARGPLKITGLEDGTLRSVYTTPNN RPTLRGIFSPGNSDSSHKNRQRARSSDRASIGAASGAGSPISIGSTHSGNEPLADGRT PRSRTKTNRLPQRVFTSLERKKEKLITLLTPRKMQRDSPQVLKDVKNMVNVSMTAKQD PEDVRNMLKAVFDEEKMRYELNGWKFLATKETVHGWMTVELEIVRLQMFDKVGIRRKR LKGDAFMYKKVCEHILSMAKID" CDS complement(join(842098..842189,842253..842709, 842756..842824)) /gene="CBG01614" /locus_tag="CBG_01614" /standard_name="CBG01614" /product="Protein CBG01614" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR87" /protein_id="CAP22995.2" /translation="MLGIPKTPKRVVRSHSRDLYQPRFRIEQPTSPLSKSHLLGFTLP LKQHILQQKSKDLPIPNPFPINTSTPKHKPPDPAISTHHSPLFSIKEPAKIYKRRSEL QYQNVNALPKILDVDEDELREEVALEDSDVIVLSPEPRPVSAPLIKKALYQPKLPPRP RTAEPVEQKPAKIAVSQTTHSSKIDSDKDSSLRKTDSFMAGSHQK" CDS complement(join(843533..843703,843756..843903, 845691..845821,845878..846006,846009..846088, 846139..848253,848297..848624,848627..848698, 848701..849015,849056..849235,849284..849374, 849428..>849504)) /codon_start=1 /gene="Cbr-gex-2" /locus_tag="CBG_01612" /standard_name="CBG01612" /product="Protein CBR-GEX-2" /note="C. briggsae CBR-GEX-2 protein; contains similarity to Pfam domains PF07159 (Protein of unknown function (DUF1394)) , PF05994 (Cytoplasmic Fragile-X interacting family) contains similarity to Interpro domains IPR008081 (Cytoplasmic FMR1-interacting), IPR016536 (Cytoplasmic FMR1-interacting, subgroup), IPR009828 (Protein of unknown function DUF1394)" /note="Predicted" /db_xref="GOA:A8WR88" /db_xref="InterPro:IPR008081" /db_xref="InterPro:IPR009828" /db_xref="UniProtKB/TrEMBL:A8WR88" /protein_id="CAP22996.1" /translation="LQLLDMIVVPDDQPDIEARVLPLLYRANFDTNFEDRSAFVTGIA KYSEEATRHAQFNDMLAEGLQHAANLYTWRCCSRAVPMAKSNDQPNRTEINEMVVNVL KPEVSKLNSFMRFTLHAIQRFCEEVRRLCHSEKRKDFVSEAYLLTLGRFINMFAVLDE LKNMKASIKNDFSTFRRLVTKFKTVIISRNFYRASQFLQTMSDTQAIHDMQNLSMFLA TQNNQRRSQTANENCKNLKVIFDIFIFNLQIEGYEELLSDVVNICAHMYEQQLYISPN EKHMFVKVIAFSLFLMDGDAANVAKLDQKKRLSIQRLDKIFKSLEVVPLYGDMQIQPF AFVRRSSHYEANKWPLSDKESEKCHVNIVEKVHTIRSDHESYVTQFAKINNEVAISDR VGSDREHRELTSLALSGIQLLCQWSCAVVETISWKLLHPTNPKDNRECPDTAEEYERA TRYNYTPAEKTALIQIIAMIKGLQSMLGKMEPEMSNATRKCVYVELQAFIQHTVNEPL QKAIKNKKDLLASILQSVKDSICDVGYELNRMTDTKSKSKKSGSKVDSANSSSSDIRI PRRTAAPGSTQLYMARTQLESLISEKLCGGKKILRKELDSKTIEKISVFLRKSAHWPA LFKFSDSMTEAGELSQLWFREFYLEMTMGQRIQFPIEMSMPWILTDYILSCDEHSLIE SALYQLDLYNDAAQYSLFSFNKQFLYDEVEAEVNLCFDQFVYKLSEMVFTNYKQLASS MLLDKRFKSELSRVGTIIRTPTASRFESLLQQRHVQLLGRSVDLNRVVSQRINMSLLK ALDAAIWKFESEPLSSIIELDMLIEANRLCHSLLKEVLHSLAPFDDIFQEANHAVNSP HGRITLHVFWELNYDFVPNFVYNGSTHRFVRAKQFFRKTPAREKPPQVGQVYYWGSKS LMAAFMNISNGYNSCIGTQHLKAITRLLHYQGIAVILDELLKMTHRLLEEKIKRHVRN VFNMMPKVLKLPRADYGSTALLQYYCHHLDAVGKYPELKSEFCQDLRELGNMIIFCQQ LEVALGQEETHDLFLAAAFIGNVPQPPSRNAQEQMKQLAKLEEKYARIHLSEVLRKTN DEGQAIIAKEAELMTKERLCCGLNVFENFLLRIKQILANDEIWTGGYPTNGVFWIDEC VEWYRVYSALQFFLCQPTRDDNEVYAEELFGDSIQWGGLTLITLLGQHRRFEVLDFCY HLHRVNKGDQKDEVINQIRLSKMVERIRRFQLLNNQIFIILTNQLNENNDDDYERVKE FAPPVHPKYANHARRQ" CDS join(844513..844773,844819..844851,844903..844970, 845017..845644) /gene="CBG01613" /locus_tag="CBG_01613" /standard_name="CBG01613" /product="Protein CBG01613" /note="Predicted" /db_xref="GOA:A8WR89" /db_xref="UniProtKB/TrEMBL:A8WR89" /protein_id="CAP22997.2" /translation="MNTTGIPPKKGGKGKKSDTTEERAKRSDDPPTAADYQNLDFVDS TPPSVFMLLISGVLSFCILGILLVIFLMKVRSGGEFTQPKKPQSNREDDRPRSGRRPP DRVPPPPRDDSRRREEDDRRRREDKSRERSPRRKNEKSRSGHDRDRDRDRDHSRRENE KSRSPRQSQQKSLERRRDDRDRSRSDKDRDRSRSRKEREDRERKRSRKAREDRERERS RKEREDRSRKEREDRERERSSKEREERSRKEREDRSRKEREDRSRKEREERSRKDRED RERDRSRKEREDRDRDKSRSEDRKRTRSRQDRPKSRQDRSRSIEDRPRSRSRH" CDS join(850171..850239,850283..850635,850683..850866, 850915..851331) /gene="CBG01611" /locus_tag="CBG_01611" /standard_name="CBG01611" /product="Protein CBG01611" /note="contains similarity to Pfam domains PF03473 (MOSC domain) , PF03476 (MOSC N-terminal beta barrel domain) contains similarity to Interpro domains IPR005303 (MOSC, N-terminal beta barrel), IPR005302 (Molybdenum cofactor sulfurase, C-terminal)" /note="Predicted" /db_xref="GOA:A8WR90" /db_xref="InterPro:IPR005302" /db_xref="InterPro:IPR005303" /db_xref="InterPro:IPR011037" /db_xref="UniProtKB/TrEMBL:A8WR90" /protein_id="CAP22998.1" /translation="MNSLFEDRKVILGIIGTSVISWNVFLTLRDLLKKYTKPKAEWVP VGRIKSLHIYPIKSCKGKEVFQYRCTPLGPVFGEYLDRHFLVINSEGKFYTARTKPQM VLIETVIENGTVIVSYQGKGSAQFNIEEVKAKKDLRNGYLHVNLRTDGYDCGDDVAEF FSKVLDEPGTRVIMYDSELFTERTCKTEDGWWNNPVPKRTDDTAYADLAPYMITTQAS LDDLNSKLDHNVSSINFRPCIVVDDCAAWDEDKWLDLRIGEVELQCFKPCTRCILTTV DPESGTKNKDMQPLKKLREFRLGPGQLRQEFGESPIFGVNAGLVKPGYIHVGQTVWAK YKASAF" CDS complement(join(851720..851817,851866..852399, 852671..852999,858756..858859)) /gene="Cbr-efn-4" /locus_tag="CBG_01610" /standard_name="CBG01610" /product="Protein CBR-EFN-4" /note="C. briggsae CBR-EFN-4 protein; contains similarity to Pfam domain PF00812 Ephrin contains similarity to Interpro domain IPR001799 (Ephrin)" /note="Predicted" /db_xref="GOA:Q624D2" /db_xref="InterPro:IPR001799" /db_xref="InterPro:IPR008972" /db_xref="InterPro:IPR031328" /db_xref="UniProtKB/Swiss-Prot:Q624D2" /protein_id="CAP22999.1" /translation="MKRPLDFLLAICLILLRSSTFADEHTVHWNSTNSMFRNRHPSIE VRLGDVVRFVCPDNEGRKNGEYLTVYEVSEFAMGECALESNSREVIKCGVDTNTEKII RTHQLPIGESREPPKNVAQFIRSVNPIPNGKEYQPGQTYYYITTSSGKPGGIGQQMYG LCVSKNMRLSMKVLSSQPTPSPSSKPARSRTDARRQEDFITKSSAELMGGQEDEDSEN DNAHLLPRDLEIATNPKFRRPSQFDQAAASAGVLDGQFLKVVQMAKEGKTGTFENDRE VQKSAEKDAWDPINRHYVADLMNSAYKNANDRVVYQREPDFLIHEEDISTNSLGYSSS SSSSLPTFLIVFLIAVNLLF" CDS complement(join(863290..863340,863391..863538, 863585..863775,864215..864349,864464..864611, 864661..864995,865578..865796,867314..867337)) /gene="CBG01609" /locus_tag="CBG_01609" /standard_name="CBG01609" /product="Protein CBG01609" /note="Predicted" /db_xref="GOA:A8WR92" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8WR92" /protein_id="CAP23000.2" /translation="MMLFFCYHMIEINDTCAEDPPQADAFRMILIVFIGTIVCTIGIV LNSFLLLSFRRLDVFRSNLLYLFLLACLDILVELCFMLIFPASLVWDYFRVEFLYTCW HIYIKYVSTVGQVLIAASTLLIVAASFERYICSQRSSIQFSPQRRFLFISIVFTCALF MKGSVFFELELQSLPHCPPFQNLRLDLSEITRSESYKTIWMFWCRSIFNVFLPFFLLL VLNSLTISNLNKLHNNGFQSILVENRCQSDATDAFKPSPSPESLSCRPLLEPSVTSST ISSVSSSASNDQMPTLLRRNSEACAARRRKRDATRTLAALITIYLLTNTLNLLITIME FINPDVLGSLGEGWTYKYLADLSSVLTISSTAFRLPVYFHCNRDIRTQIRDFARSCFI DQNEKKKLGKLTMPITSSSTESVL" CDS complement(join(870001..870180,870234..870362, 873590..873784,873836..873895)) /gene="CBG01608" /locus_tag="CBG_01608" /standard_name="CBG01608" /product="Protein CBG01608" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR93" /protein_id="CAP23001.1" /translation="MGSPLCFLKNKISNSIFSNMLSNDIGLITKSHTPQTTFPSQLTK DGSKFRTFSEICGGVFFDPLLGNQVWADEIAQADVRSAEGAMIELDECQMMLFGELCL VYQKSYRQKTEARPGPTRKGPATLWYYSSSSIRSKLVDLKILLLKETMARPARQVPGR KYDNFSSFEPNIKLYFYQFSAFRNVYV" CDS complement(join(879224..879376,879422..879532, 879578..879650,879695..879826,880139..880333, 880381..880527,880570..880783,881421..881792, 881842..882028)) /gene="Cbr-glt-7" /locus_tag="CBG_01607" /standard_name="CBG01607" /product="Protein CBR-GLT-7" /note="C. briggsae CBR-GLT-7 protein; contains similarity to Pfam domain PF00375 Sodium:dicarboxylate symporter family contains similarity to Interpro domains IPR001991 (Sodium:dicarboxylate symporter), IPR018107 (Sodium:dicarboxylate symporter, conserved site)" /note="Predicted" /db_xref="GOA:A8WR94" /db_xref="InterPro:IPR001991" /db_xref="InterPro:IPR018107" /db_xref="InterPro:IPR036458" /db_xref="UniProtKB/TrEMBL:A8WR94" /protein_id="CAP23002.2" /translation="MRENRLLVFTLAAVGTGFICGLLLRQFNFSDDVRNLIGFPGEIF MQVLKLMILPLIFSSLISSLGQMDGSKSGKMSCIAIAYYLTTAIIASCIAVTIVFLFH PGNPEIKKGNLNEAIVEGDSSLSALDSLLDLLRNMFPQNIVEATMYRSQTALVVVRKK IVKNGTIDEPVLLKKTIKLTQGTNILGLIVFCTGFGIIISKLGGKVQVIVEFFIVLDK VVMKFITVLMWFSPFGIVSLIASSILDIDDMYKMMTAMALYLFTVLTCLFLHCVVAIP SLYHLLTKKNPINVAKGMAQPFVTAIGTASSGASLPQAISCVEENLKVDSRIAGFIMP LGNTINMDGTALYEAVAVIFIAQLNSVSLSFAQVITICVTATFSSIGLNAVPAGLVSM FLILSTVNLPVSDISLLFTVDWLIDRIRTALNVLGDSYCACVIQHFMQKDLEKESHSL LEDIKIEEGTLENVNRPNNSTERMEKKVSFVDYHHIPSPTAPREFNSTKTYSLKSAMI GPLRAHVVLQTRLSHLSEE" CDS join(883027..883066,883117..883292,883339..883387, 883454..883545,883616..883738,883885..884177, 884231..884341,884386..884466,884511..884681, 885189..885290,885338..885434,885481..885671, 885717..885945) /gene="Cbr-asm-3" /locus_tag="CBG_01606" /standard_name="CBG01606" /product="Protein CBR-ASM-3" /note="C. briggsae CBR-ASM-3 protein; contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR011160 (Sphingomyelin phosphodiesterase), IPR004843 (Metallophosphoesterase domain), IPR008139 (Saposin B)" /note="Predicted" /db_xref="GOA:A8WR95" /db_xref="InterPro:IPR004843" /db_xref="InterPro:IPR008139" /db_xref="InterPro:IPR011001" /db_xref="InterPro:IPR011160" /db_xref="InterPro:IPR041805" /db_xref="UniProtKB/TrEMBL:A8WR95" /protein_id="CAP23003.2" /translation="MLLGLLVLSLAFQGTVIAATDCEECKTIVDLLQFEWGEKKTEEC VMEIAVFICENFHIEDNDVCNFIISDFSDEFMYVVSKVVSLHISYCGDFVDPLAEIWN MTIPGNQPAYVPKNVVPTGNPTLRALHLTDLHVDMFYTPGLEAQCETPQCCRPQDMNV EIVENGAVKQAAGPWGTVGSCDTPYWLLTNMLEHIASSAGPIDYVMVSGDLVSHTVWA YTPETHSFMVKNLSDTIRSYFPTTPVYFAVGNHEGVPVDNIAPHFTPKKYHMDWLYKT MSNAWQGWIPADQEKTLEYNGCYMKKIYDGLRLISLNNVYGDRINFWLYINQTDPDGT LQWLINQLQDAENVGDKVHIVAHIPGSDGEALEGYALNYYKIINRFTNTVVGQFFGHT HSEKFYMMYENPDDYKSTPNNVVYSAPSVTPYSDFFPAYRIYTIDGVYKGSTYQVIDY EEWFFNLTSNNANPKNVVWEQLYKSANAEYGLKGQTPDEYNQMIERMKTDTTLFNKYY ENHYRRSQYDGLHPCDTQDCRNGYLCDARQFHQTNKLCTDLEGQGKIQKPDAKKKKYS ARFVTEKSKRRGKEECKI" CDS complement(join(886057..886578,886631..886789, 886833..886956,887334..887513,887561..887733)) /gene="CBG01605" /locus_tag="CBG_01605" /standard_name="CBG01605" /product="Protein CBG01605" /note="Predicted" /db_xref="GOA:A8WR96" /db_xref="UniProtKB/TrEMBL:A8WR96" /protein_id="CAP23004.1" /translation="MTAAYIVLITFIFYVPRIIYYRLSRFSKDRQLPGYFLLWYLSLI PCIAGCIHFSCYQVFVSGTPELHPDTFEDQVYSYYLLKSAAFSINRLVAPIVAILCIQ QIATHTQWNITIFQETAVHMILCLFVTIFVAGYTFGREYFLMRSLDSSSTIYPDHIHL DLFDLISPAITVVLFWFARQNLERQSVYSLERCGPNDPSILDRISKISVFHGVMLIFT IGGILMAPSERDELKADPSDGHTSIFFISAQTPFVHWVLLRSLLRSKKPTRLCFLFCF GDGEKVAPAPDDVEMGDRRAGNKNRNQKTEEEEEDDDDEPETLDANKIVILPESQAEE IIRREAMEVIEVREFKPEEDIQEEQDSETSNLEDRLATPVPNSNPNGITDN" CDS complement(join(889229..889636,889682..889840, 889882..889999,890051..890257,890562..891019, 891067..891175,891650..891745,892032..892107, 892142..892175)) /gene="CBG01604" /locus_tag="CBG_01604" /standard_name="CBG01604" /product="Protein CBG01604" /note="Predicted" /db_xref="GOA:A8WR97" /db_xref="UniProtKB/TrEMBL:A8WR97" /protein_id="CAP23005.2" /translation="MALKVVHLLKNGFRSSSLELFSRLHAVMDGLLSRSGSTGKDAEK TKDGLKALGDLMKLSEAAKQNDTVGATNALITLTQDLMKYAHKNNETTLEGKGKHNHH HIWQSQSTNKTDSMEYMNDTQTSASSWKSKLQAFLQVNNDSNSTDYGNNYAASWGDST GFGSNEDSQLPNLSLFDFGLGGGLLEPFDLNKAYSHNTFMNVFCTATMISFVYYVPRM IYYRANNLSNDKKHSSFVPIFFLSLIAISGAIIHIANSYYYATHNPLAVMMSGNFSLE DLFAPPDHLTPMFYKTLTASINRIVSPIVSLLCLQQISTHSQHNINFLQNPIVQMIYC LISSGVVFGYSYYEENEFMNAYADSEYPDQIHVDFSDIIPPLITAFLFFFAKHTISRQ SLYTTEKYGPNGPTTLDRVSKVVVFQTVMVFFALCAIFWSPSREEELALSPLASTWYY FFITAQTPVVHIVLFRSLLRSRKSTRICFLVCCHSGEKVDATADNGVELNQHPKINEP SEKNDENRDEEDQNEEENTMETLDHNKIVIIPDGALLEGKPEVKEA" CDS complement(join(892651..892773,893904..893968, 894186..894264,894805..894921)) /gene="CBG01603" /locus_tag="CBG_01603" /standard_name="CBG01603" /product="Protein CBG01603" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WR98" /protein_id="CAP23006.1" /translation="MRFLVVFVCLFAVSAALNCYICNSLAQPDCTTNYQSFNKICPVK SFAGLKAVKPVGCRVTRQYVNEETSIVRECAYTGEDVDKKSNKGSLGVSRVYSQCSEA LCNSANSSFHFITAAILVAVYKIFA" CDS complement(join(897747..897899,897953..898085, 898134..898245,898290..898383,898955..899192, 899236..899348,899395..899564,899608..899710)) /gene="CBG01602" /locus_tag="CBG_01602" /standard_name="CBG01602" /product="Protein CBG01602" /note="contains similarity to Pfam domain PF02931 Neurotransmitter-gated ion-channel ligand binding domain contains similarity to Interpro domains IPR018000 (Neurotransmitter-gated ion-channel, conserved site), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding)" /note="Predicted" /db_xref="GOA:A8WR99" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR006202" /db_xref="InterPro:IPR018000" /db_xref="InterPro:IPR036719" /db_xref="InterPro:IPR036734" /db_xref="UniProtKB/TrEMBL:A8WR99" /protein_id="CAP23007.2" /translation="MGVTSCNSTLQMVISLLFWQMLWVLQLLLVAAVVEDSNTETLLK QLFNTTYDVDMKPSDDLTVVTITPNTFILLSMDQTQETIQYSEEFLLKWFDPILYWNK SEVAYDKDWVKIEASKAWIPDVIITNAISIDELLDKDLQMADLHYDGIIRTSLPAVVS SPCPLKIENFPYDVQKCNISMGSWSFDRDFVAVNSSVETLWPQKGRIEVELCLNMFAA ISMMLQLVSDMMPKASRLPLLGNYIIAEVFVVTAATIAAIVIQQVHHHVHTSAIRPPN WLRCLVLCDCKQRLDSVSEASTTSSVEVPEQTIQSFTILKTSLHQTAILVRDTLQRMS SVSENQLLWLKILDKTDLLCLVLFQIANIVVTVVFWR" CDS join(901071..901277,901324..901490,901525..901666, 901710..901853,901896..902021,902065..902242, 902503..902630) /gene="Cbr-str-81" /locus_tag="CBG_01601" /standard_name="CBG01601" /product="Protein CBR-STR-81" /note="C. briggsae CBR-STR-81 protein; contains similarity to Pfam domains PF10319 (Serpentine type 7TM GPCR chemoreceptor Srj) , PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) , PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd) , PF10326 (Serpentine type 7TM GPCR chemoreceptor Str) contains similarity to Interpro domains IPR019423 (7TM GPCR, serpentine receptor class j (Srj)), IPR019422 (7TM GPCR, serpentine receptor class h (Srh)), IPR019421 (7TM GPCR, serpentine receptor class d (Srd)), IPR019428 (7TM GPCR, serpentine receptor class r (Str))" /note="Predicted" /db_xref="GOA:A8WRA0" /db_xref="InterPro:IPR019428" /db_xref="UniProtKB/TrEMBL:A8WRA0" /protein_id="CAP23008.1" /translation="MRLLSGPTWMTVSRYVDFAFTSLAIPINLLLLYCIVTKSVKGIG RYKWLMAYFSCQSIFFSILASVTHMSFHTIGGSFMMFTLSNPLHLPPWGIWVLLGGCC VSVGYVLLTLAAQFLCRYYVMTGQMDMKRKTYFFGWRMVYFFLAMLIVAVVYGGCGFV GIHLTPEKDFDIRERMAKEYNVSADKIHYVAVEYFTRDANGTRKWNYLSTGTALALNF VFTCMVIVIIYCGCTTYFRTKQGIDKLNDKLKLQRMLFRALLVQTATPTILIFLPCII FYALPFFEIPLGVDANILSITLVIYPAVDPIGVLFIMKDYRKFIADQFSAYICSPIMR CLCLPRNILGCESVETGSLNDNIALTTRI" CDS join(902893..903075,903121..903378,903429..903858, 903906..904297) /gene="CBG01600" /locus_tag="CBG_01600" /standard_name="CBG01600" /product="Protein CBG01600" /note="contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domain IPR000535 (Major sperm protein)" /note="Predicted" /db_xref="GOA:A8WRA1" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="InterPro:IPR013783" /db_xref="UniProtKB/TrEMBL:A8WRA1" /protein_id="CAP23009.1" /translation="MSDSCGDKCETLEWLRERIHNKKHFTARFIGQIADASGMDAELI VKIFGGVLFVILVFSDHAHFFANQLLVLVPALLIFVFPAEKPTDDSLFIYFSLFGALT VMDRSLERIPCYYIFKLALFVLLYVPPYELHKRISELIQEQLKKQKSNENVSEISRSQ RTTPKTNQSTRTALPPPPPQPVQEQPKPVEQAPASAPEPVPVPVPVEQPPPPPPVEQA PPPPAPAPAPVAEAPQAQQEPPAPADPEPKLPSSRSHSDLAGGSQRLKSGPNPMQSNS FYNLRSESNGFNSRAISPAGNLNDMMFLPTGKLVFNAPFDYDNLTYHMKITNNSRHRI AYAVKGNAVPRVMANPAFGILNVEEMRIVAVSVQKFAWNDVDFQKDRIAFDYVLLPDD NKENTFQMSMFQQSDSKIRKNIKIEYNP" CDS join(905351..905353,906408..906574,906622..906756, 906811..906952,907102..907453,907499..907632) /gene="CBG01596" /locus_tag="CBG_01596" /standard_name="CBG01596" /product="Protein CBG01596" /note="contains similarity to Pfam domains PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) , PF10326 (Serpentine type 7TM GPCR chemoreceptor Str) contains similarity to Interpro domains IPR019422 (7TM GPCR, serpentine receptor class h (Srh)), IPR019428 (7TM GPCR, serpentine receptor class r (Str))" /note="Predicted" /db_xref="GOA:A8WRA3" /db_xref="InterPro:IPR019428" /db_xref="UniProtKB/TrEMBL:A8WRA3" /protein_id="CAP23011.2" /translation="MGFHIHGGTMMMFTVRNTFGMPRIGIWILFGICSICAGCVLLIL CIQFVYRYFAMSHSNKLKYFTGWRRLYFVFFTLFVSIIYGACGFVGINSTPEKDLSIR LAMAEAYQVSPDEVNYMGIEYFERTETNDILLNWLSIGAASAINCYFCTAMTIILYCG IKTYKKVCHKTAHLSNYMYIQRQLFIALLVQVWPKNIISYFKENGFQTLTPTVFIFIP CMIFYVVPLFEYPLGVDSNIVSISLVTYPIVDPTGVMLIIKNYRIFLKNIFTVKLCCP FCKNTSASQPEGNLFQVKPFSENQGSLRFNSIQN" assembly_gap 905412..905790 /estimated_length=379 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(908046..908303,908349..908603)) /gene="CBG01598" /locus_tag="CBG_01598" /standard_name="CBG01598" /product="Protein CBG01598" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WRA4" /protein_id="CAP23012.1" /translation="MAMLLRVLLLSLALFGAPCSADNAARYAVHQIMSVVEKAYIHRD ITSILYLLDTSFNYTMCGYQGTMSTFKGYLEVQMDSLMDLKFLVDYDNAYIETKDDLE TLTFHVDSQALYKDKSRVEGGAVVTAIKKKYAPIFYLSHIHQQCRVTAKRHHRLYRLF TNEDLYDYRK" CDS complement(join(911451..911498,911544..911627, 912442..912627,912673..912765)) /gene="CBG01597" /locus_tag="CBG_01597" /standard_name="CBG01597" /product="Protein CBG01597" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WRA5" /protein_id="CAP23013.1" /translation="MRNLLLIFVFCTFASSWVIYRKSHKKRLICREETEWTNSTANYM TNSAIRSTSDEDVDDSSASSETRRARKKVRSKRDIEVDPVHKEPIIYLGTSSNSTVFI DDGDFDIVSDQLTKEELDMVKQQIMDTCNALYSV" CDS join(923486..923638,924004..924142,924193..924571, 924617..925493,925542..926541,926606..926961, 927008..927401,927445..927658,927710..928053, 928097..928323,928711..928815) /gene="CBG01593" /locus_tag="CBG_01593" /standard_name="CBG01593" /product="Protein CBG01593" /note="contains similarity to Pfam domain PF00003 7 transmembrane sweet-taste receptor of 3 GCPR contains similarity to Interpro domains IPR000337 (GPCR, family 3), IPR017978 (GPCR, family 3, C-terminal)" /note="Predicted" /db_xref="GOA:A8WRA6" /db_xref="InterPro:IPR000337" /db_xref="InterPro:IPR001828" /db_xref="InterPro:IPR017978" /db_xref="InterPro:IPR028082" /db_xref="UniProtKB/TrEMBL:A8WRA6" /protein_id="CAP23014.2" /translation="MILPYLVTFLLLLVPPVTSSTANISSLIEALGPNKLCSVYDPFK VLPENNKFQIGGSFPLHQDDCTTLRPDTVQEIVAIQWALTHWNQKDENGDCKLGLYAG DTCSRSAESLSQSLRFLDSVGYHEPKECRTETPGAKLLGLIAPKDYESSMSLGKFLSV SAIPVAAYSSESVNALTELDVENTIATSPTIGVYVEALIRLMNQMRSNLVTVVDDGSQ NPVTKRVISYLRDADIFVSESIPIDHPFLAQALEDSDSSIVVSILNKKQLMKTVRHPS IYAMSKMWISIPTEGEALDESEQLELLHKDAKLEIVSLQPKYKELPQFRDYFIRVLRN NFKNYQLLTSYIEQVYNCTNEDCDLDKDVMMKSYVQARTAEASIRMTYAFAAVAQIIG ANKQYEKTCSHASAECTELIMETLESMDYAFNKQDPPEFAGERLQFYRGTENILLASG MQVEAIEIYNQDEEPVTSRLLSFTTGSPPTVIMSSLRSADQRLRSICAPYRPFCGQCP NLQIVNADHHFLSIPRHYPLYLVGLFDLHSGQTCQSMAHTDISLPMAFVHTVWTFKQR FPQLGLLKDLDFGALLIDSCSSGKQAIESVVRSETQCFRFNQAGRNITIVPKSVFGYA SALHGDSQESLKGYFSSGDTDAALVSVDSEHSALQRSFTALPSSRNQALALLKLLNRM QWQFVTAALSEQDPESLSLFRSFERLALDRGVCLAEVINIGGSRLDNVRSTTNVTIIF ATARDAADYLVASKTQRGNHVNVMMGDAHDWYLHAPNKEQFPGTVSVQPRNILYGDFR EWLETTTPLTLPELWYWSYIESRYGCALSQKSKVIYGKMCTGDELLNIESLGRMTKAG YLSRGIERFLFAMDSVYKNLCPAQNGLCLEFYEQGRKQILTQLKKTSTEDDVEIYEFL PDINNHFTYHLIANWTLTTGLRMTNQYRSGNGMNTESKCQPPMCKCFLDGDFFQRPLD SFVFRPDEPEGSDQSSYIKRQPAFGSEKVEYQSVFEHITSGHWRDHPHNYVLLALITV LVVVAVAVLVLVLVKLYLRVVKGNQSLGISLLIGIIILYSTAFFFVFDPTDSVCRLRV ILHGLGYTICFGVMIAKATQLRNAETLGFGTSIHISFWNYWLLLFFIVGVQIALSISW FLEPFMSTIGVIDTNVQRMMCTMGKVEFVVSNFYVMILILMALFINMLNRNIKRNYKE TKWLLYSTVGCFFTWVAWITLYLVLGHEFRDTVIVVELIACATILLGFLFGPKIYILL SYEPVVVAFKRDPFPNHTDLFEKDDDLPSQRAVSPASSTSSSSNRSSSGSSYTSSSKR PVNAVGPLPLHKNIEDQSPIFHTVMRKKTKVRRSNSEHDTIMNVGIPMTSVPIIRSPS ARDEKVHRVAISPPLRD" CDS complement(join(929486..929585,929634..929808, 929856..930078,930124..932292)) /gene="Cbr-vha-5" /locus_tag="CBG_01592" /standard_name="CBG01592" /product="Protein CBR-VHA-5" /note="C. briggsae CBR-VHA-5 protein; contains similarity to Pfam domain PF01496 V-type ATPase 116kDa subunit family contains similarity to Interpro domain IPR002490 (ATPase, V0/A0 complex, 116kDa subunit)" /note="Predicted" /db_xref="GOA:A8WRA7" /db_xref="InterPro:IPR002490" /db_xref="InterPro:IPR026028" /db_xref="UniProtKB/TrEMBL:A8WRA7" /protein_id="CAP23015.2" /translation="MGSLTRSEEMRFCQLIVEKDAAFNIVAEIGKNPYVQFKDVREKE IFQKSFLSFFQLNPNVNNFQRTFVKDIRRYDEMERKLRFLEAQIVKDEIIVSGKVDNG DYAILPTSELNTLEGTLVELEKDVKSMNDSDAQLKANFMDLKEWDAVLDKTDEFFQGG VDDQAQEELEAQDEDGVTRSEKGPVNYLVGIVRRERLNGFERVLWRACHHTAYIRSSD IEEELEDPSGEKVHKSVFIIFLKGDRMRSIVEKVCDGFKAKLFKNCPKTFKERQSARN DVRARIQDLQTVLGQTREHRFRVLQAAANNHHQWLKQVRMIKTVFHMLNLFTFDGIGR FFVGECWIPAKHVDHVRRAIEVGAERSGSSVKPVLNILETSVTPPTYNETNKFTAVFQ GIVDSYGIASYRELNPAPYTIITFPFLFSCMFGDLGHGVIMLMAGLWFVLREKNLQAR NIKDEIFNMFFGGRYIILLMGIFSIHAGIVYNDLFAKSFNIFGSGWKNPYNMSEVDSW IEHTEHGKEMLVELAPEHAYDHAGGPYSFGVDPIWNIAENKLNFLNSMKMKLSVILGI SQMTFGVVLSFFNHTFNKSKIDIFTVFIPQMLFMGCIFMYLCLQIILKWLFFWTQEAT IFGQIYPGSHCAPSLLIGLINMFMMKDREAGFVQPGGKVNGEYKEVEACYLSQWYPGQ SVIEMILVVIAVICVPIMLFGKPIHHVMQQKKKQKELHGNVTVRANVVADSSEIVING GHKKEEAGHGGDHGGHEDESFGDVMVHQAIHTIEYVLGCVSHTASYLRLWALSLAHAQ LSEVLWHMVFVTGGLGISGTAGFIAVYVVFFIFFVLTISILVLMEGLSAFLHTLRLHW VEFQSKFYLGLGYPFVPYSFKTALQEAELAAQ" CDS complement(join(935468..935533,935581..935940, 935984..936110,936155..936270)) /gene="CBG26447" /locus_tag="CBG_26447" /standard_name="CBG26447" /product="Protein CBG26447" /note="Predicted" /db_xref="GOA:B6IEY4" /db_xref="UniProtKB/TrEMBL:B6IEY4" /protein_id="CAR98464.1" /translation="MDRPPGSKDPNPTNVESNLLRNQERFTILEPPTDARETNTQQIC RKIRNFKILGFLLISVIVLSIFGLGYLVWKNQEQKETIVHLESEMQELLDRLDDPTYF VNQTKKEEQMLKVDETEYLDELFARKREYEEKMRLMSEAESKKNGTKSSHKEEEANIP EYEEGFETDDGIEDGEYAEYENEKIVEAIGNATVIYDDDDEKAVELPTDDYTEETAPT PPLD" CDS complement(join(937646..937756,937806..937934)) /gene="CBG01590" /locus_tag="CBG_01590" /standard_name="CBG01590" /product="Protein CBG01590" /note="contains similarity to Pfam domain PF09415 CENP-S associating Centromere protein X contains similarity to Interpro domain IPR018552 (CENP-S complex, centromere protein X)" /note="Predicted" /db_xref="GOA:A8WRA8" /db_xref="InterPro:IPR018552" /db_xref="UniProtKB/TrEMBL:A8WRA8" /protein_id="CAP23016.1" /translation="MTMHIKQSTVRSILTVARRGKKRLNLDSDALAVLTALINLLAQE TIARTCQTAANTGDRHVTRDHLKRIIAQIMLDFAV" CDS complement(join(938166..938415,938461..938528, 938578..938683,938733..938791)) /gene="CBG01589" /locus_tag="CBG_01589" /standard_name="CBG01589" /product="Protein CBG01589" /note="contains similarity to Pfam domain PF02996 Prefoldin subunit contains similarity to Interpro domain IPR004127 (Prefoldin subunit)" /note="Predicted" /db_xref="GOA:A8WRA9" /db_xref="InterPro:IPR004127" /db_xref="InterPro:IPR009053" /db_xref="UniProtKB/TrEMBL:A8WRA9" /protein_id="CAP23017.1" /translation="MDNDVVARTKFMGFLQNVSEEVFHPSILAEDKSFKKMQKECEEW AKLKLTCDRLLADAGKMVEGKTEIGQRIYMNMEVRDTKHVVVKLAEDVLVEMPLREAM KVCDRKMDMLKNMMEKTQNNITRLKTDLTMLLATMDLPYVEPYKFKLPKDFPFRMDVH " CDS complement(join(938956..939484,939533..939784, 939891..939943,939989..940421,940470..940548, 940600..940679,940727..940773)) /gene="CBG01588" /locus_tag="CBG_01588" /standard_name="CBG01588" /product="Protein CBG01588" /note="contains similarity to Pfam domain PF03666 Nitrogen Permease regulator of amino acid transport activity 3 contains similarity to Interpro domain IPR005365 (Nitrogen permease regulator 3)" /note="Predicted" /db_xref="GOA:A8WRB0" /db_xref="InterPro:IPR005365" /db_xref="UniProtKB/TrEMBL:A8WRB0" /protein_id="CAP23018.2" /translation="MTSNQSVRFESESHLHCVMCFIAGQSGEKIVSIYPHRKPQPKAS VKEPPVQTPVNPGLCSKPTLTSMPNQGFGFGKEQTEFDIDLGMLAYVFKTQEIACNDG FDMKINTQRFVGYPKTWKTRGGCTNYQVMIVFALKQGCDQHTASAYQTLSNKIAVSLV MLQNYFGFLEREDKWADMADNMTEPLREFAKTSFIVNPLMDMYDEVRKRGNIHKYLIN FVELGFCDEAHALPYHGILLLEDVWPTPDANPIVAKLLSHCSPDRSILDMSTASGIPI FEVFMIIRHLLQWTRAILIYPLCNTNIYTSATSPQPLDKMAEKFAAQFGTTIHLAAGL SHFNPPKTLETFIRPNLPLHEQGVRAKLVVALLRHQMLMQLHQFYYILKPYSNAELPK PKEECPDELKQIIAKSALPHDVRKVVADICGSMLETNAYSSVKRKLTLLVKCAPMMDG NYHLEDIKYKNNLDRAEIEDVFKSFELVIATFRRPDFVAE" CDS complement(join(940984..941148,941197..942334, 942484..942635)) /gene="CBG01587" /locus_tag="CBG_01587" /standard_name="CBG01587" /product="Protein CBG01587" /note="contains similarity to Pfam domains PF01302 (CAP-Gly domain) , PF12799 (Leucine Rich repeats (2 copies)) contains similarity to Interpro domain IPR000938 (CAP Gly-rich domain)" /note="Predicted" /db_xref="GOA:A8WRB1" /db_xref="InterPro:IPR000938" /db_xref="InterPro:IPR029071" /db_xref="InterPro:IPR032675" /db_xref="InterPro:IPR036859" /db_xref="UniProtKB/TrEMBL:A8WRB1" /protein_id="CAP23019.2" /translation="MEVGQRLRVNVDVATIRYIGEVDGYGSQRWIGLEWDDPSRGKHD GVVKGHRHPTGGSLMKMEAVPQPTDLLFEIRDRYVEDENVENEIELAQSSKKIELIGM EQTAAKQSNIEKLVNIVLDNRSVGFPPPSDSPQFPLCQELNLYGNLLFKWETVGQILK HFPKIRELNLRRNRMRSFAEEENECEGEIYSESCRKLVISECSITENSLDPVLRRFPT TSEVVAFGNDLKRFLVSDSVAHRLTLLDLEDNLFDSINAIEGVFPNLTQLSIANCGIT SLADFEGCSRFPRLEYLNVRGNVITDWRSVNAMKSLKHMKRLLFDCKAMSVEKGIHAY EVVIAKLSTLIDLNRFDVSEVERRSAEIRFLNKYAGIEDKTDHQEDITRLIAIHGEPT LDTAKKGLTVVQIRIECGNRVETRKLPLAMNVQKIRDMLTRLFKLSHSANARLYLVMT EKTKQHRIELDNPLREFGYYSPSEDRDILVVEHD" CDS complement(join(942999..943187,943235..944119, 944170..944346,944391..944493,945142..945245, 945293..945352)) /gene="CBG01586" /locus_tag="CBG_01586" /standard_name="CBG01586" /product="Protein CBG01586" /note="contains similarity to Pfam domain PF01769 Divalent cation transporter contains similarity to Interpro domain IPR006667 (MgtE magnesium transporter, integral membrane)" /note="Predicted" /db_xref="GOA:A8WRB2" /db_xref="InterPro:IPR006667" /db_xref="InterPro:IPR036739" /db_xref="UniProtKB/TrEMBL:A8WRB2" /protein_id="CAP23020.1" /translation="MKGGGGVGDGKKDYQAAVHEGLSTFDQLGIALEDVGKSLEAETA TTGGGFLPRIMNETSSLKRRSFDPTNDLVNMSVVPAETSYVLFFQVLFPFVVAGLGMV FAGLVLSIVVTWPLFEEIPEILILVPALLGLKGNLEMTLASRLSTLANLGHMDSSKQR KDVIIANLALVQVQATVVAFLASAFAAALAFIPSGEIDWAHGALMCASSLATACSASL VLSLLMVVVIVTSRKYNINPDNVATPIAASLGDLTTLSVLAFFGTVFLKAHNTESWLN GVVIVVFLLLLPFWIKVANENEGTRETLYNGWTPVIMSMLISSAGGFILENAVRKYHS LSTYGPVLNGVGGNLAAVQASRLSTYFHKAATIGELPNAWTIHRFTSFTRAFFSKEWD SRSARVLLLLVVPGHICFNALIQLFTYTSKDNITPHGALFTSLYMIAAIIQVMVLLYV CQFLVSLLWKMKIDPDNSVIPYLTALGDLLGTGLLFIVFLTTDYFDPDELLAPKH" CDS complement(join(945610..945748,945793..946052, 946097..946243)) /gene="CBG01585" /locus_tag="CBG_01585" /standard_name="CBG01585" /product="Protein CBG01585" /note="contains similarity to Pfam domains PF08445 (FR47-like protein) , PF00583 (Acetyltransferase (GNAT) family) contains similarity to Interpro domains IPR013653 (FR47-like), IPR000182 (GCN5-related N-acetyltransferase (GNAT) domain)" /note="Predicted" /db_xref="GOA:A8WRB3" /db_xref="InterPro:IPR000182" /db_xref="InterPro:IPR016181" /db_xref="UniProtKB/TrEMBL:A8WRB3" /protein_id="CAP23021.1" /translation="MNIRCARVDDLMSMQNANLMCLPENYQMKYYFYHALSWPQLSYI AEDHKGNVVGYVLAKMEEDPGEDPHGHITSLAVKRSYRRLGLANKMMDQTARAMVETY NAKFVSLHVRVSNRAALNLYKNTLKFEIVDTEPKYYADGEDAYAMRRDLAKWAEERDI EPADKEAYATSKSSDDKKKRH" CDS join(946738..946777,946824..947624,947668..947783, 947834..948827,948876..949432) /gene="CBG01584" /locus_tag="CBG_01584" /standard_name="CBG01584" /product="Protein CBG01584" /note="contains similarity to Pfam domain PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) contains similarity to Interpro domain IPR000504 (RNA recognition motif domain)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WRB4" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR035979" /db_xref="UniProtKB/TrEMBL:A8WRB4" /protein_id="CAP23022.2" /translation="MGFDSSRGRGGGGGFRGGRGGGGFTPRGGGGGFRGGDRGRSPGG FRGGDRGRSPGGFRGGDRGRSPGGFRGGDRGGFRGGDRGRSPGGFRGDRDGGFSPRGR GGGFRGGDRGGSPWRGGNDRGGSPWRGGDRGVAHRGRGDFSGGFRGDNKFSPRGGRGG FTPRGRGGNDFSPRGGRGNFQERGGGNRVGFNDKRKNFGDEDDDEEEEDEVPKKKFAS GTPHAKQTEPVEEESEEDEEDEEEEESDDEPQPQKKVVKGALAAAAEDSDDDEEEDDE EEEEESENEGPVTKKVISVKEVDDEDDEDEEDEEEVEVDDEDEEEEEDEEEEEPVAKT PALKSALKTLDSAKGKQVNIATVATPTTVDKKAPSTPHPAKNVKAAAGQVPQLKFDDD SDEDEEDEEVEEEDEEEEEEEEVHPVKKAPVAKQTLSQIGQAIQDDSDDEDEEDEEEE EDEDEEEEEDDDDVPVITTKAELLKKIAANRAASGVSQDDSEDDEDEEDEEEEEEVVK PVVKQQAIVQKGQKKAEATKVSTASTEKQGLKRKIDEPTVSSKQLKSDGAEIVSEEER RRQERDSRSLFIKEISKKAKDDEITSLITGVDSFRRKKNSNFGWIVFNTVADCKKAHE VLSKAKIQGKSLYVDFCLSESKREKEHDARPINPLQLFVNALPFQCNQTDLKNIFRAS TEIKIHHPAGKPNSKKRAFITFGTEADAQAAFSKSKGLRVHNHLVDVFYARQQDNKKN DNKPKKAAAPTPQKKVVPKTVDSSDEDSEEVASSDEGIEEVAEEPPKQKKLVKKVNHI SLNFLLIKIRFQMDTKPIPKVQQKKPQFKKTGFKGKK" assembly_gap 950007..955143 /estimated_length=5137 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(955429..955754,955879..956083) /gene="CBG01583" /locus_tag="CBG_01583" /standard_name="CBG01583" /product="Protein CBG01583" /note="contains similarity to Pfam domain PF00013 KH domain contains similarity to Interpro domains IPR018111 (K Homology, type 1, subgroup), IPR004087 (K Homology)" /note="Predicted" /db_xref="GOA:A8WRB5" /db_xref="InterPro:IPR004087" /db_xref="InterPro:IPR004088" /db_xref="InterPro:IPR036612" /db_xref="UniProtKB/TrEMBL:A8WRB5" /protein_id="CAP23023.2" /translation="MAPISMADIGILEECGCKALRFGELGVVSSDSDDSMHSEEDEVT LTESVRIPVEMYPSYNFIGRIIGPRGMTAKQLEKDTGCRIMVRGNHSNKIYGNSSQKS HGDGVQDPIDMPLRVIIETSGPRREATARITGALNVVNSLLIPPPDGRDELKRRQLVE LAIMNGTYRPTCSNHN" CDS join(964584..964650,964700..964819,965886..965986) /gene="CBG01581" /locus_tag="CBG_01581" /standard_name="CBG01581" /product="Protein CBG01581" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WRB6" /protein_id="CAP23024.1" /translation="MGNGMRKYSSCDDYYKRRRKNNDGGANFTKDYCEYWKTEKKGGK DDNFRNERNEFSFSNNMAYDSPLRNSRKQPTTTFISSFDGSNNFSKNLGRR" CDS join(966287..966403,967847..967947,967996..968473, 969275..969490) /gene="CBG01580" /locus_tag="CBG_01580" /standard_name="CBG01580" /product="Protein CBG01580" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WRB7" /protein_id="CAP23025.2" /translation="MLVIVCFLLTFQLYSIECFSTENDDDSWKELSFSLRTDGNGTMK SAHIQWTDRFDDSFAYAYTNENRSDLKFLYDKPRPELFVTNKFILEAFTQFLDFFQNR TKIGRVTVSIPSMTDDLKKVTTRKNKYGQKPEIDYFRFNSYDYFLYTEFLRLSSGIPK SLKISFFYFPERTEKVLNGSILYHPKVRKITELDLRTVESDVSDNALHQLECESITVR SSTITNSGINKILKEWQDGLRSTRYLKVVSDDVQKAEIMDGVSKRTLQRGVWEIKNRF NVSATVTVSRVPTNLYDSKPTFEFAVS" CDS join(970745..970865,971074..971264,971313..971455, 971502..971633,972214..972354,972581..972738, 972974..973113) /gene="CBG01579" /locus_tag="CBG_01579" /standard_name="CBG01579" /product="Protein CBG01579" /note="contains similarity to Pfam domain PF03567 Sulfotransferase family contains similarity to Interpro domains IPR005331 (Sulfotransferase), IPR007669 (Protein of unknown function DUF595)" /note="Predicted" /db_xref="GOA:A8WRB8" /db_xref="InterPro:IPR005331" /db_xref="InterPro:IPR007669" /db_xref="UniProtKB/TrEMBL:A8WRB8" /protein_id="CAP23026.1" /translation="MTHSCDREPLLRQDDDSQEDILEMEDDFYEKPSQIRFVNKERLV PKAVFLVIGVFSVIYGMDRYHISMKEIESRECSDALDDCDHLPFNQTVVPPFYNYLQD FTISPRYGISLCLLPKVLSTTGTATICYLEDPDKFAADNRTISTETYITRFCERNEMK SYNMVKHYLNDNFENIIVTRNPYDRFISGFTEKCVNDLEDDYCHGCGADMRCFLQKEY RRLMRMSMLFPVYTVADTHFAPQTWYCDMRNTLKNSTIVRFSLQGIEKVKMIDDMLNV FRRRKVPERQLDEIREQLSLGKSHHTTTGSSLREHYERLVREDESIRRALHRIYYYDF LYLGYDM" CDS complement(join(973725..973907,973953..974219, 974273..978220,978279..978738,978788..978876)) /gene="Cbr-vit-6" /locus_tag="CBG_01578" /standard_name="CBG01578" /product="Protein CBR-VIT-6" /note="C. briggsae CBR-VIT-6 protein; contains similarity to Pfam domains PF00094 (von Willebrand factor type D domain) , PF09172 (Domain of unknown function (DUF1943)) , PF01347 (Lipoprotein amino terminal region) contains similarity to Interpro domains IPR001747 (Lipid transport protein, N-terminal), IPR001846 (von Willebrand factor, type D domain), IPR015255 (Vitellinogen, open beta-sheet)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WRB9" /db_xref="InterPro:IPR001494" /db_xref="InterPro:IPR001747" /db_xref="InterPro:IPR001846" /db_xref="InterPro:IPR011030" /db_xref="InterPro:IPR015255" /db_xref="InterPro:IPR015816" /db_xref="InterPro:IPR015819" /db_xref="UniProtKB/TrEMBL:A8WRB9" /protein_id="CAP23027.1" /translation="MKFFIALALLGAALASSHFDRSLERNIQESSFRAGREYRYLFNG QLSAGLPIPSTPQGISRLQTQVNLQWTDGNTVRMQLEKTRFATSQQETNSQKMLPFER FEEVDRMDREHQQLLSYPVEFDYEHGLVHNIRFAEDDQPWSENIKRAVINMLQVNILK KEKHDGAEKSDNQEQLFAFTNVERTLEGECEVLYTVEENQKEENQRWAKSINFDKCTR RPYIHHVQVPVCKDCEQTLDQDKMSSTVLNYNISGTTSSFLINSVELRSQHLFAPISE KHQLVSAFTLNTLELIYAGEKKSEIKEVRSEKTSELIYNQEWEWAEQQWAQTGEEKYL RQMPQWSENKVEMVQKMFSLMAKQIEQGEAELEAAHTVARIVKVLRQCNEEQLEQIYR HVAEHKDEKIAEQLRSIYFNTLALAGTRVTIQQFVDKVQSRKNITPLKASVAIKTLVD MRYPSLAIAEDVARLCESDVSSSFPALRQSCWLTYGAIVNGVCGQTPRVFVQKNGVKM CPRDSKQRIVDKLVQQFESASSRYEKVLALKTLANAGLDLCVYPLEKIILNEQHETTV RAQAIESLRRLRHQMPVKIQRVLLPIYLNRQQPQHIRMSALHQLIYTQPEWSVLSQIG NQLRQERNQQVRAFTLSLLRSYANNESPCEQSFSSRVQSLLNNMPFSSQEIDRFESVY GKWSTYSRRHQSGFEANFASLFTSESVLPTEMMASLEGVLSGEWNQYFAQVGFTQNNM EKIIKKLLTSVQEKGLEQIVVRGKRATGSFKPTEFLNSLLEKLRITRRQPSEQDPHAV VYIRHRDMDYAFLPIDAESIPEVVRSMIQGGRLEIGDIERVLAQGVHFSASNAAFLYE TVRRIPSPMGLPVQFTSKMPTISSIRGKITFELEPKNGKSFDGLRLRLQAEPRVASTH VLSLTVICPIAEVGTKFLHQAVLNTPIDTEVKMNWEDKIVIRSLYTAPSEEKRIALIQ SRPVTFVRTVVPEARQYPEPVEMTYMLPENQQLSQSLDHEYKQFRVQGTLNRPTSGRV PQWIVDNTVELFYKPHIEKYEAVLELDMYNNYKMEKNYEKEYKKHTGKRYLESEPEYD EEEHQEQITKKFEWLQNEKVYQHVAKFEVKPSVLKVDVEAVCNKDFHFCKTQLRGEDI LATVQYVYPQTPRTVEELKEQKYRQLVVLGEMTYGENTIQININGQQSQEQKKFVKQI EQAPEHETLLEASRLDQYQAVVEYELEPKSAQYVARYWNLVQAYFRTQYPWTSRIKSR EESSRKNVIRATFNVEPRQRQTVNMTIETPAEKTILERAELPFRLPTAQIHYQPRNSR FEQKPMLEKIVRHTTKQANCVVKSTKIQTFDEVAYKNQFTPCYSVLAKDCGSEKNEPR FVVLMKKMNEKKEWKNVKVVYGENEIEMYKTEEGLVCRVNGEEIEYQPESEIEKKQYS LIWLNKNTVKFESDDVTVQFDGVNARIHLSALYRNQQCGLCGHYDNEKETEFYDAENQ ENTIPKFAKSYLYKDSKCNYERNVFEKEENFRRIERDEEEQEQEMNYEESRREEQDDE PTEKIVAIERQHEICFTQKPVLRCQNGKSQESKKQKTDVYCLPSSNSWARRQVREIRR EPLTKWSEERLENLRDQPKMEERTVRVPVDQKCEKFDY" CDS complement(980645..980944) /gene="CBG01577" /locus_tag="CBG_01577" /standard_name="CBG01577" /product="Protein CBG01577" /note="Predicted" /db_xref="GOA:A8WRC0" /db_xref="UniProtKB/TrEMBL:A8WRC0" /protein_id="CAP23028.2" /translation="MQQDVRGKAAALVFTPALAGVFIFLCVSGHAFFSLFVLFHVLAA AGQLGLEIYEVSRGSASAAPVADAPAGAAPVADAPAGAAPSAAQPAVDPAPAPAQ" CDS join(982483..982634,982677..982896,982940..983073, 983125..983194) /gene="CBG01576" /locus_tag="CBG_01576" /standard_name="CBG01576" /product="Protein CBG01576" /note="contains similarity to Pfam domains PF00255 (Glutathione peroxidase) , PF00578 (AhpC/TSA family) contains similarity to Interpro domains IPR000866 (Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant), IPR000889 (Glutathione peroxidase)" /note="Predicted" /db_xref="GOA:A8WRC1" /db_xref="InterPro:IPR000889" /db_xref="InterPro:IPR029759" /db_xref="InterPro:IPR036249" /db_xref="UniProtKB/TrEMBL:A8WRC1" /protein_id="CAP23029.1" /translation="MKGPTSFLLPLISFFFGVACDGGDESDQHGTIYMFQAKNIDGKT VSMEKYRDKVVLFTNVASYCGYTDSNYNAFKELDGLYREKGFRVAAFPCNQFGKQEPE SELKILDFVKSSYTYTPDMYSKIEVNGPNTHPLWKFLKNERGSSLASDIPWNFSKFLV DKNGHVVARYSHSVNPLDLEEEITRLLNSNS" CDS join(983472..983555,983797..983869,983921..983955) /gene="CBG01575" /locus_tag="CBG_01575" /standard_name="CBG01575" /product="Protein CBG01575" /note="contains similarity to Interpro domain IPR010580 (Endoplasmic reticulum, stress-associated Ramp4)" /note="Predicted" /db_xref="GOA:A8WRC2" /db_xref="InterPro:IPR010580" /db_xref="UniProtKB/TrEMBL:A8WRC2" /protein_id="CAP23030.2" /translation="MAPKQRMAVANKQFSQNVTQRGNVPKGNKTAESKLPTSQWLIGL FIFVVCGSAIFEVIRYIKA" CDS complement(join(984426..984689,984735..985008, 985066..985385,985434..985771,985822..985893, 986391..986541,986598..986665,986723..986825)) /gene="Cbr-nhr-66" /locus_tag="CBG_01574" /standard_name="CBG01574" /product="Protein CBR-NHR-66" /note="C. briggsae CBR-NHR-66 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /note="Predicted" /db_xref="GOA:A8WRC3" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR013088" /db_xref="InterPro:IPR035500" /db_xref="UniProtKB/TrEMBL:A8WRC3" /protein_id="CAP23031.2" /translation="MDVALLLDFMTASNDVFAAMEMSQKQSPPGLFKIAKNEPSSSSN SQPGTPAMSDRRAVPACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSCTKGGN CTVVKDGSAGQKCRACRFRKCINSGMDKNSVQHRRDAIGKYSAGVKRELSPDNEYEPP SKLSTSSEPSTSAGFPIGGSPPSRIPRVPSTSRVPPSPCFNPSCGQKSVLHELICRQN FLVEQRQLFYAGCLGDWFRKPTAVENQTLSELTDFSNCMFHLWKIEPRLAADFMNRNR YLDPLPIVEKLKIYRNFVIMRQSVEEPYLTWRHGGLEKRWFVMPNNTYIDFTDVTKYF TNGALKDLNLDCETTKNLFLPSFTHAMDTIGQKMKNLNVSDTELTVLLGLVLLDPGIY GIQESTRRFLKGVRDQLIHDVYMYYEDEMASEYDPEIRMADLFMLVAAIKIHSIKTSE NMHMLRVFDLIPADACFNQMLDVESVNVSPDGKRDAEAEQGPMPVSVPEAARVDSAFP YDHDDESPPVLERNCDEPITP" CDS complement(join(992291..992382,992503..992695, 992776..992847)) /gene="CBG26448" /locus_tag="CBG_26448" /standard_name="CBG26448" /product="Protein CBG26448" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEY5" /protein_id="CAR98465.1" /translation="MPPVYEPTATTTSAASVWPIGIPQIKSQVDLINFAREIFSTQPT STSSSVVPRDIQNLNPIVGSLASGKSPTAITAIAATAANMTPQIGGLTSLGSLTSIPA ELLLQLSRLDNINLLP" CDS complement(join(1005551..1005686,1005736..1005861, 1005908..1006036,1007556..1007613,1008090..1008153)) /gene="CBG26449" /locus_tag="CBG_26449" /standard_name="CBG26449" /product="Protein CBG26449" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IEY6" /protein_id="CAR98466.1" /translation="MRLWENWTGESRSLIEFSLFGSLGAPNSSETESELQNTQGKDKS KSSTTGTTSGNPVETTAIAQDSLMAKPEQESPTGGTKSNMLDSIKIIRGKKNLRKPTQ KQKKGETDSQHTQIINIPLGKASGSEAGANKLTIPEEQKAVEKPNGKKIQFADKIVKS TITPGAKKCF" CDS join(1008491..1008618,1009764..1009893,1009947..1010467, 1010511..1010919,1010969..1011051,1011098..1011303, 1011368..1011435,1011479..1011586,1012093..1012467, 1012513..1012662,1012752..1012826,1012874..1013005, 1013055..1013288) /gene="Cbr-ocr-2" /locus_tag="CBG_01572" /standard_name="CBG01572" /product="Protein CBR-OCR-2" /note="C. briggsae CBR-OCR-2 protein; contains similarity to Pfam domains PF12796 (Ankyrin repeats (3 copies)) , PF00023 (Ankyrin repeat) contains similarity to Interpro domains IPR024862 (Transient receptor potential channel, vanilloid), IPR002110 (Ankyrin repeat), IPR020683 (Ankyrin repeat-containing domain)" /note="Predicted" /db_xref="GOA:A8WRC4" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR020683" /db_xref="InterPro:IPR024862" /db_xref="InterPro:IPR036770" /db_xref="UniProtKB/TrEMBL:A8WRC4" /protein_id="CAP23032.2" /translation="MGSASSTQSSMNNFVGMGRLREDMKIYQLVDMHGGGELLPWLRY AITSSDTSFIDAYLETKVKEFLYNQGKGKLVTVTELVKLRNKERNERLGAFSRKKGKG KSGPNVLDDFNQEGENVGDLKKALKLLDGGGKGGRNESKYREISWKLEERGSMGETII GCCLLHASDIHNALVYKILEYYPKLLNDIHISEDFYGLSPLHQAIINTDCKLVFKFLK LGADVNSRCYGAFFCADDQKASRTDSLEHEYVELSLKTNYTGNMYLGEYPLSFAACLN QPEMFRLLLAFKANPNAQDTNGNTVLHMCVIHENMAMFKLALECGASLRTVNKQSLSP LTLAAKLAKKEMFTEILELEGDSIWAYGDASSTAYPLAKIDTINETSGELNEASALSL VVYGQTVEHLELLDGLLDTLLEAKWEAFAKRNMIVSFTAFTLYYVCFVTAFTLRPIGF STEMITEGWINRYSEPFPGRHGAEGQTIVKPIINTTTGLVEWNEAMTQCHLRQYFDPN IPFANAYIRLVFEVFVVIGIIIQMFLDFRDIKRIGRKKWWTVLSAFPAKITFKVTYFL VIAMVPIRLACQFSPILLVIDNVLVTVTMIFTTVHYLYYCRVIRFVGPFVLMVYTIIA TDIFRFMLIYGIFLMGFSQAFSLIFLSCEREANTIKALIVNQSSIITAYDTSIVKNAE AFENVIQSPIEAFVRTFILTIGEFTVLYRNLALCPANTMVWIGKFNMLIAMMTRTYET IFQTQLEYKRQRAQVILMLELSLSPKERHQYLLKYSRPTGTNKKTRSLVVSKKSSFNR ETKQGQRVLEEKMKKIIEEKKAVLKRKMKDMEIKEGIRPVTGYSRTPRPHTQYMNRGG GAQNGQPTNGNINSNF" CDS complement(join(1013449..1013759,1013807..1013959, 1014016..1014134,1014181..1014251,1014300..1014579, 1014623..1014874,1015491..1015709,1016802..1016931, 1016981..1017134,1017421..1017733,1017786..1018048, 1018625..1018701,1018885..1019052,1019238..1019490, 1020281..1020283)) /gene="Cbr-try-2" /locus_tag="CBG_01571" /standard_name="CBG01571" /product="Protein CBR-TRY-2" /note="C. briggsae CBR-TRY-2 protein; contains similarity to Pfam domains PF00089 (Trypsin) , PF00057 (Low-density lipoprotein receptor domain class A) contains similarity to Interpro domains IPR001314 (Peptidase S1A, chymotrypsin-type), IPR023415 (Low-density lipoprotein (LDL) receptor class A, conserved site), IPR001254 (Peptidase S1/S6, chymotrypsin/Hap), IPR018114 (Peptidase S1/S6, chymotrypsin/Hap, active site), IPR002172 (Low-density lipoprotein (LDL) receptor class A repeat), IPR003609 (Apple-like), IPR000001 (Kringle), IPR017448 (Speract/scavenger receptor-related)" /note="Predicted" /db_xref="GOA:A8WRC5" /db_xref="InterPro:IPR000001" /db_xref="InterPro:IPR001190" /db_xref="InterPro:IPR001254" /db_xref="InterPro:IPR002172" /db_xref="InterPro:IPR003609" /db_xref="InterPro:IPR009003" /db_xref="InterPro:IPR013806" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="InterPro:IPR017448" /db_xref="InterPro:IPR018114" /db_xref="InterPro:IPR023415" /db_xref="InterPro:IPR033116" /db_xref="InterPro:IPR036055" /db_xref="InterPro:IPR036772" /db_xref="InterPro:IPR038178" /db_xref="UniProtKB/TrEMBL:A8WRC5" /protein_id="CAP23033.2" /translation="MESSRIFDDLLEVRSQTGFFFPLCSKSFHQKYGEQACASISNTF SSYSEIPLQQYTYSIGCTSSICFTFLSAFCKTGIKVFCSSSLCAPGTLQVGNKCLSIS TVPVQGYSEAKDYCSPYSLISSLKPSEIESIRETILPSFTDTRSFLTSGLRQGSTWKW GNGDTVEQEISGTGRCLAFQSGVLVAFDCDTEAYVFCESGRECVGRNTEYSGTSNRTS DGQGCLMWNDPAVLFQRDSDFEIWNHNFCRFIEQDGRKSPTPVCYSKPHQLSECNIPN CPESLNDAIVLETGDSCPIGSFSCDNGSKCISEKFQCDYEVDCNDGSDEQNCEDYLQN YELIGAYRLADSIIEVWTFIPHVQGCARKCRESLLMCEAFSYEPKTQTCLLTDTSQTY SSLARKITSLYYRRRFSSKDVTFEVEEDTVMYATKNSKKGQVCNENFSREKLSSICKI LGFGDPIYIVESHPTELFLERESLPQSSADSSSSRLSSSLYSGRPVAALRLPTWNLSC LREPNCTSTIVSTCQPSSECSRCQEAACGDGSCIRSRQLCDGSIDCKSGDDESDCTAR SFRLTNGSDTRGYLEVLFRAKWEPLCADHLDGNRANLICNDMRLGEHGSLLSTNISIS SGFDVICGSECILRRSSSCTRLARISCISQNGLASVSQCGHRYVEVNARDAARSRIAR VVGGFETVPGAFPWTAALRNKETKAHHCGASILDRTHLITAAHCFEEDERVTSYEVVV GNWDNNKTDGNEQVFNLQRINYYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLPSN DFIYTPGRQCVVSGWGSMGLHYAQRLQAALIPIIDRFDCVNSSQIYTSMSRSAFCAGY LEGGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWINS VVNGGTR" CDS join(1015549..1015728,1015774..1015899,1015944..1016048, 1016098..1016199) /gene="CBG01570" /locus_tag="CBG_01570" /standard_name="CBG01570" /product="Protein CBG01570" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WRC6" /protein_id="CAP23034.1" /translation="MRDSRSADEEPPPVFRNKAKKKGGKKKNQQKTEAETPAPKTIRL DVIPQYKSGLYKNVYWMHPNMAITRESREKEEFVGEVAFYQGLNTNVIVNFFTGLDYS EHSKLRFSHTAHTPPVIVRAASSTSSASSSTSYSKPTTDYLQKNMDTLVKKLDLLAFK QAILESRPSD" CDS complement(join(1020808..1021090,1021137..1021351, 1021816..1022391,1022444..1022599,1022961..1023101, 1023481..1023579,1023630..1024412,1024459..1025456, 1025503..1025617,1025827..1025940)) /gene="Cbr-klp-19" /locus_tag="CBG_01568" /standard_name="CBG01568" /product="Protein CBR-KLP-19" /note="C. briggsae CBR-KLP-19 protein; contains similarity to Pfam domain PF00225 Kinesin motor domain contains similarity to Interpro domains IPR001752 (Kinesin, motor domain), IPR019821 (Kinesin, motor region, conserved site)" /note="Predicted" /db_xref="GOA:A8WRC8" /db_xref="InterPro:IPR001752" /db_xref="InterPro:IPR019821" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR027640" /db_xref="InterPro:IPR036961" /db_xref="UniProtKB/TrEMBL:A8WRC8" /protein_id="CAP23036.2" /translation="MSATETSLRVVVRARPMNTRETKEGARRCVEFYENTGQLVINDS ATFAYDSVFPDTVDQETVYEKTALPLLDRIFSGFNATILAYGQTGSGKTYTMGTEDND GTDEMRRGIIPRLVNALFQRIMATQTPEAFTVTVSMFEVYGDNVYDLLRPDKVKLNVH GDEKNCTIVNLTAVPVLDLKGALKQLATGCHYRTKAETAMNAMSSRSHAVFTVYVEKT ATPESDSAFSAKLQLVDLAGSERLKKTEAEGNRMKEGININAGLLILSQVIAALATKQ KHIPYRNSVITRVLQDSLGGNSFTVFLACISPADTNSQETLNTLRYADRAKQIKNKPI INKNPKAEEIAILHALIKRLQQENSDLKQGIAPSDGKIGDVASSTEIMVLKDEVARQT EELRERRMKQSEFIVRMNHLAQRNARLEAEKEKLKNMVADVRTTLLNEEMMDSVEIVR SIQQVVGNSEDSTTIQEEDQDETTTVGPAADDTMYDAERLPELQAEIDDLDKQIAMKD ENRQKAIDEQREFIEAIKQRESEKTQLVVRCGELETEINKLRQECKKATTASKLAEER RQKLKELERQHAEDKKTLSELKKLQETRRKMEDTLKKTEDELKNLKTQRLRLLREQRA EASKFQAFKQKHEREMAQIKSKLQKREMDVVRQKRVDDQKLAVLQQRLAESNRANKTL RELNLKRANRKGSTTDATAIQSLIEDELELEITAQRCQLLCAELRRQRQDVMKRINEM ESKKFEGSKKVCRRYAKARRQCGRLDESMHFDETFTKFCDHSECEENADDCQSMTDTM ECDDFRQTCQIFQRRMSNVDPDVSIVLAGEEEFEENRQKELASLRASLDTINEEIKDS LRNETISGSEERSASRWEKVPIEMRPVFENIYSHAVNHIRKELDLEFKLVKTENEFTA KIATKASQEEKRKREEEEAKSKVRELQSSLEAAKADSHEKIKLLLGLVMSGQVDEKVI QQFESLKNQYCDIEQKVKKLARRRTTHNNGVPLTGLTPKPELKRNERSRRAVDHYGKV VNSEDVTMDDSRHFRSRRAGSTAAELNRTTDENVRRKVAMSPIKFDDDTRLSGVEEDM ENMDDGSLNNGTFVKSIAQTSVIQLEADSSTMGESNKTFVISSDVSQDAVSSDDIPPI RRKHRRTGLGPAL" CDS join(1026959..1026986,1027034..1027118,1027169..1027355, 1027406..1028692,1028757..1029114,1029161..1029325, 1029373..1029449) /gene="Cbr-hgrs-1" /locus_tag="CBG_01567" /standard_name="CBG01567" /product="Protein CBR-HGRS-1" /note="C. briggsae CBR-HGRS-1 protein; contains similarity to Pfam domains PF12210 (Hepatocyte growth factor-regulated tyrosine kinase substrate) , PF01363 (FYVE zinc finger) contains similarity to Interpro domains IPR018205 (VHS subgroup), IPR024641 (Hepatocyte growth factor-regulated tyrosine kinase substrate, helical domain), IPR000306 (Zinc finger, FYVE-type), IPR017073 (Ubiquitin binding protein, Hrs/VPS27)" /note="Predicted" /db_xref="GOA:A8WRC9" /db_xref="InterPro:IPR000306" /db_xref="InterPro:IPR002014" /db_xref="InterPro:IPR003903" /db_xref="InterPro:IPR008942" /db_xref="InterPro:IPR011011" /db_xref="InterPro:IPR013083" /db_xref="InterPro:IPR017073" /db_xref="InterPro:IPR017455" /db_xref="InterPro:IPR024641" /db_xref="UniProtKB/TrEMBL:A8WRC9" /protein_id="CAP23037.1" /translation="MASKFQKILEQATDSTLVEPNWEGIIACTDMIRSGEVPAKPSLQ AIRKRLQHENPHVVNHTLLVLDACVKNCGHKVHAEVATREFMEDFKNLVTENKYDEVK NKSLEMLQCWATAFANKPEYKMVVDTHNLMKLAGFDFPSLKEADAMFMAQVAPEWADG PECYRCRSIFTVFTRKHHCRACGQIFCDKCSSREMALPQFGIEKEVRVCETCYEKKVA EIKERYPALKKQLAAAVAGKKSVSTGGDSEADRAAKEKLLREKEEEDLALAIAMSQSE AEAKEKEKQNSLYHMYNGIKPETDQGGYKGAAETSTAPPADDAAADPLARYLNRDYWQ QKKEGKVEEWSGATSTVGALSATAPPPSEPSIAPSICSTLMGPDENSLNAEIAAMTLG ATNGLNTSVSDDAKAQADDTMRWCQSIKDQVSVMDNRIRSNLARGRPVFNDSAIQDLF TRLTEFHSHVLSRMHTLDEQRGYYEGLQDHLANIGEARQAIDEMREEHERKRQERMAE EQRLRQAQMQQTLEMMRIKKHAMLMEQREQALQRFQQQQQEMAMRRQQQAYYNPQMGY GAPPPGQHQPYYGYSQGQQAPAQYQPPQQTPQPQQYYQQFQNGPAAPPTSTNQHQPSM QQQYQQQQQQYQGYYQHQNYQQQGAYQQQHPQQLQNYQNGGTSTPVENGQYSQQGDVN QEHTSQMYQQPSVNGQNGYGNVDQNNVAAAHPPQQQMAEQPLISFD" CDS join(1029825..1029893,1029941..1030042,1030091..1030315) /gene="Cbr-glrx-22" /locus_tag="CBG_01566" /standard_name="CBG01566" /product="Protein CBR-GLRX-22" /note="C. briggsae CBR-GLRX-22 protein; contains similarity to Pfam domain PF00462 Glutaredoxin contains similarity to Interpro domains IPR002109 (Glutaredoxin), IPR014025 (Glutaredoxin subgroup)" /note="Predicted" /db_xref="GOA:A8WRD0" /db_xref="InterPro:IPR002109" /db_xref="InterPro:IPR014025" /db_xref="InterPro:IPR036249" /db_xref="UniProtKB/TrEMBL:A8WRD0" /protein_id="CAP23038.1" /translation="MGGASSTPPKPTLSEHSKKIAEEVKEHAVVLYTKDGCGYCVKAK NELYEDGIHYTEKNLNTVAKVFPDPQEYIKGLMDLTRQRTVPQIFICGKFVGGYTELN ALRPNLAKILETCSVDHGETLRREFTSKI" CDS join(1031402..1031494,1032096..1032449,1032882..1032966, 1036630..1036664) /gene="CBG01565" /locus_tag="CBG_01565" /standard_name="CBG01565" /product="Protein CBG01565" /note="contains similarity to Pfam domain PF00568 WH1 domain contains similarity to Interpro domain IPR000697 (EVH1)" /note="Predicted" /db_xref="GOA:A8WRD1" /db_xref="InterPro:IPR000697" /db_xref="InterPro:IPR011993" /db_xref="InterPro:IPR030214" /db_xref="UniProtKB/TrEMBL:A8WRD1" /protein_id="CAP23039.2" /translation="MSVYPPTPTIPMMHGGADRRKAKRPPNVGSRELNSQENEMLFQL VGSDAVSLTAAVVQLLKSDRGSWRVELPHGVVSLVKDYAQRAYFLRIFDILDERVAWD FKLYKAFQAQSFPQCRKLLAFEQMENGEDGVVIGLNFFSEYEAAEFKEHLDRRHAQER KSNTPGRPGMPLMMPSAASVLWEGTVCK" CDS join(1037334..1038366,1038871..1039017,1039539..1039650, 1039697..1039966,1040014..1040455,1040502..1040855) /gene="Cbr-wsp-1" /locus_tag="CBG_01563" /standard_name="CBG01563" /product="Protein CBR-WSP-1" /note="C. briggsae CBR-WSP-1 protein; contains similarity to Pfam domains PF00786 (P21-Rho-binding domain) , PF02205 (WH2 motif) (2)contains similarity to Interpro domains IPR000095 (PAK-box/P21-Rho-binding), IPR003124 (Actin-binding WH2)" /note="Predicted" /db_xref="GOA:A8WRD2" /db_xref="InterPro:IPR000095" /db_xref="InterPro:IPR003124" /db_xref="InterPro:IPR036936" /db_xref="UniProtKB/TrEMBL:A8WRD2" /protein_id="CAP23040.2" /translation="MWMVVSEDPAGRLRYQYHSLPPPSSHSLTLPPPTAPSPNPSTVS AAGAPIYSSTSSGRHMQRFARGGCLSFPDSMGSSPRTNPRSSHTLPNEGHYYEMEQYD NVNDYSTYGGPDSTSSASSSAEYQDPVYSTRYGGSATGTYARRHNYARCYVPISADAF YYYHQQHHQQQQNQQQTHSYRPRHRSSHHQEQRRHRAPSPDPDYSPPLSRNKVRFHLP NEPVSRGEYVSNTYQTSRQMKVFNTDDFGDEEDEYEAVSLNPDPAPHHHDSVLVHGSN GQVSVMVKKEEPIYCSGGSDSAESSSATPSSVEADTPPPIPTHPPARHRLVKKSQKEL NARSNSNSQSGIGSTPTRPFEITQAYGGTIRGPPMTIGGGQGITPMGTMAAAPHSHTQ PDGNASSSGGSWFRKDKNKKKDKKSKIKKEDISNPTNFQHKAHVGWNQDSGFSNTVYD DDMDEATRNILKAAGLESNNLNEDDKKFVKKFIAKNYDKYVSVGNLDPSQISAPLPPV QNCQQPAPQSWNQTPARPYRPAFPSSAPIGSSSYSSPAAPPPPARLESHGLAPARPPP PPPSNNNSHRGIAPARPLPQTPSYGTPDTRPHAMPPPPPPPPASGIAQVSTSAPPPPP PPPPMAMPAAGAGAPPPPPPPPPPSGNILASLPPAQNGRSNLLAEIQAGKQLRTVQQN SSNDAPKGGDARGDVMAQIRQGAQLKHVRFEEEGNLIDLKLEQFQVDAAAEQERRKSA TSGAAGMGGLAGALAKALEERRLNMGIDDSSDDDEEEDDKNEWSD" CDS complement(join(1042026..1042181,1042228..1042456, 1042506..1042918,1042968..1043099,1043340..1043585, 1044244..1044295,1044343..1044439,1044678..1045380, 1048501..1048545,1050598..1050700,1051213..1051408, 1051972..1052074)) /gene="Cbr-pct-1" /locus_tag="CBG_01560" /standard_name="CBG01560" /product="Protein CBR-PCT-1" /note="C. briggsae CBR-PCT-1 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8WRD3" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/TrEMBL:A8WRD3" /protein_id="CAP23041.2" /translation="MKKLKRRLSAAFRPGSNNNVSITSSGGSYYDSDCEARNNIVIGY GMMSAPLHGRTWTLSESMSHLSDKNGAIMEECVIDPTALLRVSRGGTAGRRYDTNVNY INGMHVPPPRTHSLYYPRGYNNSSRNSYYGSNRRNFHEHILILLVLLCMSAYSPADST AEARLLSGSDPISDTENLLDLAYEVGVSGSSDNTRYDSRESENDDDDVGWEREITANK RMCKSATFHDFCDDSEYSRRPVTTLPEEDFDEEDEDEFEDASDRRELDDYEEEEEEED DDDEIVVEEEEIAADDIEEQEEEEKEVSHVPNGVSSQTTPSVEETKKGKNKKRKAEDG MRKMKKSSTFASFLNMFVSRRRSGRDSGVRDGERLMSRSTCMLRPSISLSVVQESMIL GSDGGSVEVSPCTSDQTPTGVPPRYIVNVKMRQKPARKWSEEEIQKRLSLPADLRLPV AVVDKLNRTPTLDQPLTRKNRRASLSEIGFGKLETYEKLEKLGEGTYATVFRGRSILT NKFVALKEIRLEQEEGAPCTAIREVSLLRNLRHANVVTLHDIIHTDRLLTLVFEYVDR DLKQYMDSCNNAMQMNNIRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLITAKGELKLA DFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTDYSTHIDMWGVGCILFEMIAGRAL FPGGTPTEQLGLIFRTLGSPRPDRHPTICEKPTFYPYANRHYNPEPLCRQIPRIDAHG FELLMKFLQYEGKDRVSAAEALKHPFLRTIAVKCCHLRDEQSVLDAEGVHIERELLAS DHHHSRRHHRGTLVKEKYRMHSSHHT" CDS join(1060588..1060679,1060721..1061109,1061156..1061214, 1061261..1061366,1061412..1061581,1061631..1061738) /gene="Cbr-clec-51" /locus_tag="CBG_01558" /standard_name="CBG01558" /product="Protein CBR-CLEC-51" /note="C. briggsae CBR-CLEC-51 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domain IPR001304 (C-type lectin)" /note="Predicted" /db_xref="GOA:A8WRD4" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:A8WRD4" /protein_id="CAP23042.1" /translation="MFQPMLLLSLLLPLVSAQCGPGAVFQSSSSRCLTFFRTATDFQS AEAICATLNGHLVSIHNTIDNTFVSSQAQKYFDGSAWLGAKTTAPDVTNPLNWYWTDG SNFDYQNYRVGEPSAQGSTACMQLQTGTAKWLTANCTSQLPFICSYSSSVTPTCPTVT IPSHCPSGYTWYDETDFCYKSTVRFTSFNDARSACQADGGDLASIHSQTENQFLVELS KAGITNKDKGHNDDVFIGLIYQNSKWQWTDGTPVNYLNWGDGEPNNMGKEWWTSLVAD PHEDKNTEDTRWNNVAQIDMRAYICKRAPLH" CDS complement(join(1062262..1062473,1062518..1062706, 1062763..1063201,1063517..1063872,1064024..1064471, 1064709..1064783)) /gene="Cbr-faah-1" /locus_tag="CBG_01557" /standard_name="CBG01557" /product="Protein CBR-FAAH-1" /note="C. briggsae CBR-FAAH-1 protein; contains similarity to Pfam domain PF01425 Amidase contains similarity to Interpro domains IPR020556 (Amidase, conserved site), IPR000120 (Amidase), IPR015830 (Amidase, fungi)" /note="Predicted" /db_xref="GOA:A8WRD5" /db_xref="InterPro:IPR020556" /db_xref="InterPro:IPR023631" /db_xref="InterPro:IPR036928" /db_xref="UniProtKB/TrEMBL:A8WRD5" /protein_id="CAP23043.1" /translation="MLFYVVLLLLGAGAYYYHFTANRKKIIERLEVVAQRRRDDLAKN VVETRRIADKLDPKRRDYVGGLDFIQLQNELQKGTVTCVEAVRTYFHKAILAHEKTNA VTCFILEADQQAEELDEKAKQASYVKPPMFGVPLSLKECLKVKGYDTTRGFVQDAYRP ATEDSIQIEHYKKLGLIPFCQTNVPQSLLSYNCSNPLFGTTTNPFDSTRTCGGSSGGE GALIGGRGSIIGIGTDVGGSVRIPCHFTGTAGIKPSKMRFAHRGGGASVPGKPMIDAN DGPMAQDVRANVEFLRNVWGDIDFQSDRDPYCPPVHWNESLYSSEKKLRVGYYIDDGW FTPTPALQRAVLESKKHLENAGHTVIPFYPPRLTKVMQLYFRAVCLDGGQYVLNKLLK DIIEPTIRFQVTLWMVPTWVQRILSYPVSLVFPRMAVLMQSLTRDTFELREAYADIEA YREEYVGMMMKDNLDVILCPASVMPAPQHDIPSKVVSGVSYTCLYNLLDFGAGVVPVT TVSKSDEEKLINEYPETDKWYQTVKKATIGAIGMPIGVQVAAPPFREEAVLRTMREIE LAITGK" CDS complement(join(1068054..1068265,1068312..1069598, 1069760..1069901,1069954..1070031)) /gene="Cbr-faah-2" /locus_tag="CBG_01556" /standard_name="CBG01556" /product="Protein CBR-FAAH-2" /note="C. briggsae CBR-FAAH-2 protein; contains similarity to Pfam domain PF01425 Amidase contains similarity to Interpro domains IPR020556 (Amidase, conserved site), IPR000120 (Amidase), IPR015830 (Amidase, fungi)" /note="Predicted" /db_xref="GOA:A8WRD6" /db_xref="InterPro:IPR020556" /db_xref="InterPro:IPR023631" /db_xref="InterPro:IPR036928" /db_xref="UniProtKB/TrEMBL:A8WRD6" /protein_id="CAP23044.1" /translation="MILILLTAILAGAAAYFYRFWSVREKRQVQLRKIVEKKRAERAE SVRFAKQSAEKLDLETRKKIAAMEYLELKESLQSGSVSCIDAVRTYYYKAIQANEKTN SVCMFVKEAEQWALEWDEKAKDPEFKKPPMFGFPMSLKECVPLQGYDQTRGFVQDTFR PTEIDGVLVQQLKKLGAIPYVQTNVPQSLLSYNCSNPVYGTTNHPMDKNRTSGGSSGG ESALISADGSILGIGGDVGGSIRIPCAYTGTTGIKPSHLRFSHRGVCGSVPGRPLINS NDGPMSTRVETNVDFLRTVWADTWISEQDPYVPPVTWNEEAYQSDKKLKIGYYTDDGW FTPTPVCQRAVMEAKQILEDAGHTLVPFRPPRVPDVLIMFLRAVCVDAGKYLSKKLMN DIIDPLLYTQVVLWMVPVPVQRFLASFIKVFFPRLGSLMNALTLSTVELRNTYADIEA YRSEMAALMIDQKIDALLCPVTVSPALPHIAPSKLFAGTSYTGIFNLLDYAAGSVNVT HVTKQDELDLESDYEASDPWYALAKNSSRGTIGFPIGVQVATPPYREETCLRLMREIE LGVTGK" CDS complement(join(1071933..1071986,1072300..1072664, 1072711..1073276,1073778..1073926)) /gene="Cbr-pmk-1" /locus_tag="CBG_01555" /standard_name="CBG01555" /product="Protein CBR-PMK-1" /note="C. briggsae CBR-PMK-1 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR008351 (JNK MAP kinase), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR003527 (MAP kinase, conserved site), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR008352 (MAP kinase, p38), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8WRD7" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR003527" /db_xref="InterPro:IPR008352" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/TrEMBL:A8WRD7" /protein_id="CAP23045.1" /translation="MFPQPTMEQMLHPTPREGYYVVELNRSVWVVPNYYINLTPIGTG AYGTVCAAECTRSGTRVAIKKFNRPFQSIIHARRTFRELRLLRCMRHENIIDLLDVFT PNENMNDIEDVYFVSMLMGADLSNILKIQRLNDDHIQFLVYQILRGLKYIHSADIIHR DLKPSNIAVNEDCELKILDFGLARQTDSEMTGYVATRWYRAPEIMLNWMHYTQTVDIW SVGCILAELITGKTLFPGSDHIDQLTRIMSVTGTPDEEFLKKISSEEARNYIRNLPKM ARRDFKRLFAQATPQAIDLLEKMLHLDPDRRPSAKEAMEHEYLQAYHDESDEPIAEEM ELNDDVKADTIDEWKKIIWEEITDFQKNVAFADEEEGDEDQME" CDS complement(join(1074308..1074457,1074522..1074711, 1075095..1075191,1075242..1075313,1075814..1076006, 1077334..1077445,1077886..1078074,1078120..1078205, 1078774..1078863)) /gene="Cbr-pmk-2" /locus_tag="CBG_01554" /standard_name="CBG01554" /product="Protein CBR-PMK-2" /note="C. briggsae CBR-PMK-2 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR003527 (MAP kinase, conserved site), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR008352 (MAP kinase, p38), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8WRD8" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR003527" /db_xref="InterPro:IPR008352" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/TrEMBL:A8WRD8" /protein_id="CAP23046.2" /translation="MAVKMGDFPGTFIADLGPAPVEITPEGYHEIELNKTKWVIPHWY NSLRALGEGAYGVVCTAEYEPTGDRVAIKKFFRPFQSTIHAKRTYRELKLLRTLQHDN VLEMIDVFTPDPDASSLNYVYFVSVLMGSDLQNILKIQRLTDEQIQLLIYQVLRGLKY IHSAGIIHRDLKPSNIAVNERCEVKILDFGLARAQDAEMTGYVATRWYRAPEIMLNWM HYTQTVDIWSVGCILAELVSGRPLFPGDDHIDQLTKIMSVVGTPQEDFWSKIQSEEAR NYIKNQSPIVRQDFGALFPMASPYAVELLEMMLILDPDERISVSSALRHDYLREYSVP NDEPVATITVTIDSAEENAESLNDWRELIWNEIRLFQTSARRLSFVSCTDTEEESMKI " CDS complement(join(1079431..1079507,1087769..1088116, 1088165..1088423,1088481..1088628,1088684..1088793, 1088846..1088930,1089332..1089483,1089574..>1089795)) /codon_start=1 /gene="Cbr-pmk-3" /locus_tag="CBG_01553" /standard_name="CBG01553" /product="Protein CBR-PMK-3" /note="C. briggsae CBR-PMK-3 protein; contains similarity to Pfam domains PF06293 (Lipopolysaccharide kinase (Kdo/WaaP) family) , PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR003527 (MAP kinase, conserved site), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR010440 (Lipopolysaccharide kinase), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8WRD9" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR003527" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/TrEMBL:A8WRD9" /protein_id="CAP23047.1" /translation="SSSSTSSTLPISHVRRHEDVPTPSAPPSKRSNIQPQESYEPKTW LQQQMEQEQQRKLAEEKKKQSTSTTGDDEEDMLQDVLSQPRGPHKRRFNFVMVSNITF AIPEGYDVDSIEYLGGGSFGNVIKTSAVCRDGHRRWVTIKKMREPFFDPHHARRIFRE IKLLQLMRHDNIICALDIYTPDEENDFRDVYVVTEFAGRSLYRILKQQRDYGRRVLTE EHVKFIIYQIIRALKYIHSANIIHRDLKPGNLALTDDSDLMILDFGLARSLEKKDTSL TQYVQTRWYRSPEVIYWKIDSYTNLADMWSVGCIAAELLTGDPLFPGDDVNAQYQRIT QLCGSPDEELLAKIENDNSSAMKAVIQSYKVYKRRNFREVFAAYSPSADFIDLIEKLL VLDPEKRITVEEAIQHPYLAEFSLPADEPRADHIFDLDDTQARTRFQWRDAVWTEIMN YQRIMQSPIIPGETDR" assembly_gap 1081770..1082769 /estimated_length=1000 /gap_type="between scaffolds" assembly_gap 1090250..1090410 /estimated_length=161 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(1091192..1091492,1091537..1091667, 1092463..1092778,1092823..1092989)) /gene="Cbr-islo-1" /locus_tag="CBG_01552" /standard_name="CBG01552" /product="Protein CBR-ISLO-1" /note="C. briggsae CBR-ISLO-1 protein ;" /note="Predicted" /db_xref="GOA:A8WRE0" /db_xref="UniProtKB/TrEMBL:A8WRE0" /protein_id="CAP23048.1" /translation="MVQAGASEIDPLQWTGNQRVLHFGPMAQRDPYFYYYPKGWDILY PATFGFFPYRTSKFRGSSSLICCTAFGVFLLIGGLLMSLLGFKYLYTSPFWTWPYEQR IRPPPIQIAGPILFGLGCIFLFVSLIYFLCTTKLCDLSLHHTKKHNDPARLTTITTHY APLPPIFEKDPYQPLPPPAYPVLENRHAMTNVVKPHDEKKLYPPVIPGCSTLSLHRRS PNNIFVASPYNTLRATSVGRYQSGFLDTNSIMENRFGSRQPSVTSRRQSSEASSQKRS KSMGPLHRTGSNRSKGSGRSRRRENSQV" CDS join(1093979..1094020,1094168..1094224,1094275..1094392, 1094443..1094586,1094629..1094690,1094750..1095005, 1095053..1095129,1095374..1095448) /gene="Cbr-isp-1" /locus_tag="CBG_01551" /standard_name="CBG01551" /product="Protein CBR-ISP-1" /note="C. briggsae CBR-ISP-1 protein; contains similarity to Pfam domains PF00355 (Rieske [2Fe-2S] domain) , PF02921 (Ubiquinol cytochrome reductase transmembrane region) contains similarity to Interpro domains IPR017941 (Rieske [2Fe-2S] iron-sulphur domain), IPR006317 (Ubiquinol-cytochrome c reductase, iron-sulphur subunit), IPR005805 (Rieske iron-sulphur protein, C-terminal), IPR014349 (Rieske iron-sulphur protein), IPR004192 (Ubiquinol cytochrome reductase, transmembrane domain)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WRE1" /db_xref="InterPro:IPR004192" /db_xref="InterPro:IPR005805" /db_xref="InterPro:IPR006317" /db_xref="InterPro:IPR014349" /db_xref="InterPro:IPR017941" /db_xref="InterPro:IPR036922" /db_xref="InterPro:IPR037008" /db_xref="UniProtKB/TrEMBL:A8WRE1" /protein_id="CAP23049.1" /translation="MASLARSGGFAVKVISGSQPHVNFVAASPAAETVSAFREVPAEF ATAETRQAAVSRSTGGVFTNGLAVKGINVTSRRLAHTDVSFPNMESYRRDSTKNTQTP ARDTEDQRRALPTALYYGAGGVLSLWAGKEVVQTLVSYKAMAADQRALASIEINMNDI PEGQTKTFEWRGKPVFVKHRTKAEIAKEKAVPVADLRHPQHDDERVQKDEWSVVIGVC THLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLHVPAYSFKDTTIVIGSS " CDS join(1096045..1096119,1096173..1096288,1096650..1097037, 1097080..1097181) /gene="Cbr-sph-1" /locus_tag="CBG_01550" /standard_name="CBG01550" /product="Protein CBR-SPH-1" /note="C. briggsae CBR-SPH-1 protein; contains similarity to Pfam domain PF01284 Membrane-associating domain contains similarity to Interpro domains IPR021128 (MARVEL-like domain), IPR001285 (Synaptophysin/synaptoporin)" /note="Predicted" /db_xref="GOA:A8WRE2" /db_xref="InterPro:IPR001285" /db_xref="InterPro:IPR008253" /db_xref="UniProtKB/TrEMBL:A8WRE2" /protein_id="CAP23050.1" /translation="MPSIPAQLNLAAFKFPLGFIRVIEFVFIIIAIAAVNSWGMTMEY NCKGQANKTVTSSQDVYTFSLSNVKLTGCDNQTHTFWRGDDSAGGSAGFFYFVNVTAL IYVIFICFVYVIFWGIYQTEKRIPLIDLGATALFFILFFFCSSIWWAGANTIGSATSD EHLKELFQQESWKSQNAAFSNREVNNGKLAISVLANWVCVLCFAFNSWFIWKEVVPRD SSNPTDIA" CDS complement(join(1097335..1097927,1099056..1099423, 1099473..1099564,1099609..1099730,1099773..1099863)) /gene="Cbr-uba-4" /locus_tag="CBG_01549" /standard_name="CBG01549" /product="Protein CBR-UBA-4" /note="C. briggsae CBR-UBA-4 protein; contains similarity to Pfam domains PF05237 (MoeZ/MoeB domain) , PF00581 (Rhodanese-like domain) , PF00899 (ThiF family) contains similarity to Interpro domains IPR001763 (Rhodanese-like), IPR003016 (2-oxo acid dehydrogenase, lipoyl-binding site), IPR000594 (UBA/THIF-type NAD/FAD binding fold), IPR007901 (MoeZ/MoeB)" /note="Predicted" /db_xref="GOA:A8WRE3" /db_xref="InterPro:IPR000594" /db_xref="InterPro:IPR001763" /db_xref="InterPro:IPR028885" /db_xref="InterPro:IPR035985" /db_xref="InterPro:IPR036873" /db_xref="UniProtKB/Swiss-Prot:A8WRE3" /protein_id="CAP23051.2" /translation="MESKDWVAGISKSDAGRYSRQLLVDDFGVSGQKNLKNTAVLIVG AGGLGCPVATYLGAAGVGTLGIVDYDRISLDNLHRQVAYKEDQVGQSKSQGLADNVKL QNSGVTTVVHNVSLDSSNAMEIFKNYDIVCDCTDNVATRYLINDVCVLLNIPLVSGSA LRWDGQLSVYHYGPDCPCYRCLFPSPPDPSSVTNCNEGGVLGPIVGTIGSMQALEVMK IAAKLSTTLAGKLLLFDGREGKSRTIRLRKRDPKCAVCGDEPSITAPIDYMLFCGAGA HDKIENLKLLEPSVRVNVHEYQEIRSAARKQFLLDTRPPVEFEIAHLPEAISTFLLFS FIDKFQYEYVITDITLNECRSLQAEELSSRLGVDSQTSDVYVICHRGNDSQRAVKLLK EKLGSIHFRDIIGGYEEWALKINDEFPLY" CDS join(1100177..1100286,1100366..1100486,1100533..1100672, 1100720..1100818,1100866..1100929) /gene="CBG01548" /locus_tag="CBG_01548" /standard_name="CBG01548" /product="Protein CBG01548" /note="contains similarity to Pfam domain PF10183 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) contains similarity to Interpro domain IPR019329 (NADH:ubiquinone oxidoreductase, ESSS subunit)" /note="Predicted" /db_xref="GOA:A8WRE4" /db_xref="InterPro:IPR019329" /db_xref="UniProtKB/TrEMBL:A8WRE4" /protein_id="CAP23052.1" /translation="MLPQLSRLQVRTLGFRRFASSHSHSDAKVEQKPDDYRPGTDSYA YENPWPKLNGGRLDWLFGDGWRRPLAKDQGAKMRREWIWFSQVAHDEHKDWARFHQAA FLLFTVLTTWFTCWIMFARPDWPMGREWALREAHLEIARREKAGLPLISPDLIPRDRV AATLPSDEELRDFDVLI" CDS complement(join(1101138..1101364,1101415..1101688, 1102407..1102454)) /gene="CBG01547" /locus_tag="CBG_01547" /standard_name="CBG01547" /product="Protein CBG01547" /note="contains similarity to Interpro domain IPR001763 (Rhodanese-like)" /note="Predicted" /db_xref="InterPro:IPR001763" /db_xref="InterPro:IPR036873" /db_xref="UniProtKB/TrEMBL:A8WRE5" /protein_id="CAP23053.1" /translation="MLLAADPYSAIDIDKLVGWLIAQAEQTNGCPESFCIVDVNDHDV YLKGHIANAYHYDRIMLARLIYETPVLAQAKAEGHLLVIYGREADRVAKVLFQRGFKT VLLKGNVAQFKEQYPCLVGPSLDFVKLKEIYEQKKNSVFGGRLWRSTSASRLKSVTRD ERAEKSKNVNSRPSSQSRKPWL" CDS join(1104661..1105374,1105425..1105622,1105670..1105894) /gene="CBG01546" /locus_tag="CBG_01546" /standard_name="CBG01546" /product="Protein CBG01546" /note="Predicted" /db_xref="GOA:A8WRE6" /db_xref="InterPro:IPR013766" /db_xref="InterPro:IPR036249" /db_xref="UniProtKB/TrEMBL:A8WRE6" /protein_id="CAP23054.2" /translation="MQNSRLAFVAFTASWCPYSQELLGSFTQAAAKYKEKYPDRKTVW GNVDCVSEMKLGDDYNIVKYPTMKVFFYGHPMVEHRGSRQVNGLIEFVEKMENTAHFV DLNEAESLTQWQQFVRPKKPTLIVWFPQGSPPYEMILKAIAVIYERTIVVGPVVSNLL EHEEHKLWFSLDGEHVEHYNGSVTNFKEILEWIKQKVVDMVRELTFEIMEEVAEQEKP MLVLFRKKGDQETERKFIEAVDRDLEKSVRRKLNIFLADGEILRNVVIRFNRNPDDLP FLVVDQLVHAYPAAWTGDEIFAPGNIKQFVSDLFNENHHKKLHEKVNELLQKILTETE RLEREAEEEKDDSKETPSTLDKQESVFKQLKPSKTRYSFAKEEL" CDS complement(join(1106338..1106693,1106742..1107369, 1107421..1107585,1107632..1107935,1107983..1108140, 1108193..1108255)) /gene="CBG01545" /locus_tag="CBG_01545" /standard_name="CBG01545" /product="Protein CBG01545" /note="contains similarity to Pfam domain PF04495 GRASP55/65 PDZ-like domain contains similarity to Interpro domain IPR007583 (GRASP55/65)" /note="Predicted" /db_xref="GOA:A8WRE7" /db_xref="InterPro:IPR007583" /db_xref="InterPro:IPR024958" /db_xref="InterPro:IPR036034" /db_xref="UniProtKB/TrEMBL:A8WRE7" /protein_id="CAP23055.2" /translation="MGSSESVPIPGGGTEGYHVLRVQENSPGAVAGLEPFFDFIVSIG NIRLDKDNDTMKEVLKQHIDRPLEITVYNSKSQSVRQTSIIPSQNWGGQGLLGVSIRF CSFDGASQHVWHIISVQPNSPASLAGLIADTDYILGAESVLHQADDLIALVQANEGKP LKLYVYNVDTDVVREVSLTPNSAWGGEGCLGCDIGYGYLHRIPVSVDRSKNLPQVPQQ ARVPVGNPLVDKIVTKPPAATNFPDPSQFSSSVPLPPAPAPATLIQNLPPPPQPVFLP QPPTSYAQSPVDQQPPHTELNNHGHSHSDGGHGHSHDDGGHGHSHESGGHGHSHESGN HGHSHDNGHGHSQEHSPSPAAAPVPVSAPTPVTSYPQQYVEQAKPATDYYQQQQPPQQ VPPQPSQQQTYQPPVNPLTSYQAYQSPASSPYYPPSASTAPNASGYQAPYYAPQSFPP QQNTYDYKAPEIPSAVPPMFSANAAPSPPTSYVNRKFDLMFFVATQNFPAIPPPAPLN FPMPSLSSIGITQLAAPPAPPTSTGFTSFQPPPFPQYGAYPSPPPQSQN" CDS join(1109678..1109732,1109781..1109917,1109967..1110211, 1110256..1110594,1110642..1110847,1110932..1111015, 1111069..1111670,1111718..1111915) /gene="CBG01544" /locus_tag="CBG_01544" /standard_name="CBG01544" /product="Protein CBG01544" /note="Partially confirmed by transcript evidence" /db_xref="UniProtKB/TrEMBL:A8WRE8" /protein_id="CAP23056.1" /translation="MIRRKKSSTGRSGRKRRGESTSPAREPDEVDAPPEFSEYDYEKM SPYILKALKGTVYPFMSNGYIHLIHELEKMLATNHFTLEYMAGEIQFMSEGYYPTPNL NNRKMPEYDTKEQGNHTSDDEGTEVASVRTAAVANDEEMAKEAEICLLPEEGEDDDFD EYPAYHVGTRFWTWCRKSFMGKIDTEFLENFKEHILDAYSDEELQKFLVNEPWKYRKR AVHTSRRKSLNTSNNKKKVSISNEVTSPSTSNGVKNGARKGSLAGYRIPNRRNSERDK EANNNKIMPIIDSMVYTACKEYKDGRSVPETPTIRRGRSRLTSPEVVRERKVAKMEID SDSDAEVDTYNDKNQPGPSSRMLSPRQLKKEKIEDDDEYERMGNGNSSTNGINGTNGH TRKPHSPKRKNGDIRSYFNSVPKNAIPSTSNSRPLVEENGFGDLDIPSDIEDFDAKAI GSKIVAKLIAGGILQESSAQIFDQMTREDETETSNSSIKVEMCEEGKEDAEDQELGEL AEELHNLQLSLKEEMVAKKALMMLTWRRAKAHFAFFHTFDQLKRGDYDLFKLGINMYR DFPNRKLPGISETMLLKIGLKKRNHLARLHYGKMYRRHPKFRWHQAYVTASSRLH" CDS join(1112496..1112540,1112618..1112815,1112859..1113108, 1113185..1113346,1113692..1114100,1114149..1114571, 1115480..1115669) /gene="Cbr-rabs-5" /locus_tag="CBG_01543" /standard_name="CBG01543" /product="Protein CBR-RABS-5" /note="C. briggsae CBR-RABS-5 protein; contains similarity to Pfam domain PF01363 FYVE zinc finger contains similarity to Interpro domains IPR000306 (Zinc finger, FYVE-type), IPR007087 (Zinc finger, C2H2)" /note="Predicted" /db_xref="GOA:A8WRE9" /db_xref="InterPro:IPR000306" /db_xref="InterPro:IPR011011" /db_xref="InterPro:IPR013083" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR017455" /db_xref="InterPro:IPR021565" /db_xref="InterPro:IPR036531" /db_xref="UniProtKB/TrEMBL:A8WRE9" /protein_id="CAP23057.1" /translation="MDEAAGADNSNVVRQGFICPFCMEDFGEYERLMFHVEDDHPEED TSDLAGLFVSNVKGFFDKAKRGIQKLDAKKSIADIASNVESELAETTEKLAERGAPLP RIPKPLPPDEISPGTMRSKTREFMATRELNINEVAVRTNMLIIRLDRLINGGPKDKDP VKRKEFEREIVPWLDDAEAPCCPLCAARFGLTRRRHHCRLCGKVLCHSCSEFLSFDTA RSLTSSSNPLGDTHIDVNEKSQDETESSNNDGNTKRSTFFSFQHKMDKMKKAMAEAVQ KVHSAAAGEEIIAGALNEQEMSDHMRVCNLCLRDLHLRESQMEKKDPPAYVQQYDFMQ ELIEEVKNLVPTYVRVVVSLKNGESVYTHQHGEELRSKCLEIQKNIEILSKRIAEGAD NKPNAAKEQQLRRNIRLSAIQSLQGLIGQMESLPTAEECANRIAKRKEKRVKDFARVN RTVMKMSNSLPQLIAHPNLNSTGSVSSLGGGPPSVDDGWTAEDNDLVFEPSSIEDDTI QTDHPLYEQREQLRKFLYQASSTGKMDEMDILERNLKEIEEEMIRLGLPC" CDS complement(join(1115937..1116068,1116116..1116294, 1117650..1117701)) /gene="CBG01542" /locus_tag="CBG_01542" /standard_name="CBG01542" /product="Protein CBG01542" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WRF0" /protein_id="CAP23058.1" /translation="MKSFTIIFVFIAIVLIRECSSLTMQGLFRKLKEARTQQQSDRGR YPDEARMEADSISRIHIDDKSFIRPVASIAGRPVIPRRWTYGQPISEVFIDENGIAIP VRPTPSLNSILRSRGGLY" CDS join(1118996..1119013,1119093..1119249,1119301..1119443, 1119487..1119652,1119698..1119915,1120090..1120357, 1120405..1120625) /gene="CBG01541" /locus_tag="CBG_01541" /standard_name="CBG01541" /product="Protein CBG01541" /note="Predicted" /db_xref="GOA:A8WRF1" /db_xref="UniProtKB/TrEMBL:A8WRF1" /protein_id="CAP23059.2" /translation="MNWAYKICLIFIVISSLSVKFSSSDDRFMESEIHEDMTRQGCWK VGGVSLNDLQFDPKNAMATALKTNKNGDKITVFNYGMQYFNSELKNLSLSTGGTHPLY LRIKEDALWDNKPQDKVNCQRVLNYKCLQDITINSLESLENFNSMKCTELKKDLIIDG FKHLAQNRGSFSFSGFENIQKIRGRLVIQNVETDASFKFEKLIQVGQFADEKGLPSIQ IRDNVMGRISMERVNITKCYPGAPKTCVSIQDNWIIENNDNPLKIKFENFTAPPRWNP VEGIHAEPGTERFEAEVERLEEHPEEIEETYDDPELNDEDVDLKCRLCFIPYTILNYV GIPALLGIIFWIIKFLMKKDINYDLATVYGADEKENQDNYFAVDGKKDNKEKDSGMDD LGSN" CDS join(1132762..1132839,1133363..1133662,1134083..1134241, 1134927..1135058,1135108..1135293) /gene="Cbr-nsy-7" /locus_tag="CBG_01539" /standard_name="CBG01539" /product="Protein CBR-NSY-7" /note="C. briggsae CBR-NSY-7 protein ;" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WRF2" /protein_id="CAP23060.2" /translation="MSTDTKYKYAVVRIPENSVVEFFTLLVSKGYSDVSFVASLAQCN LRDDPNDDQPTTSNSVKETVNDEDSNSENNKSSPPRRQSSGSQPQSVSSRPTLALVLL KLKISIHGLRLLRLLIRLQIYYQLNNGTEPKKPIFGFQASGVDFDLSNNEWHDNLKMS NGHSSTEKFHPYSSGSQKNDSPLQTRMKGWQREYIKEVIKNSHYPTEDELRDIELKCD LSRKQILRFIAKRLTNPNRKPRINHHDEKRKEQEERDSLGDQEDELQESDVSHLHHIL SSLQETTA" CDS complement(join(1136245..1136318,1136371..1136486, 1136584..1136905,1137241..1137411,1139520..1139852, 1140375..1141173,1141218..1141822,1142339..1142914, 1142925..1142926,1143725..1143762,1144795..1145035, 1146937..1147033,1149231..1149375,1151755..1152047, 1152095..1152171,1152960..1153137,1153391..1153508, HE600976.1:299..322)) /gene="Cbr-sax-7" /locus_tag="CBG_01538" /standard_name="CBG01538" /product="Protein CBR-SAX-7" /note="Predicted" /db_xref="GOA:H8WH61" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR026966" /db_xref="InterPro:IPR036116" /db_xref="InterPro:IPR036179" /db_xref="UniProtKB/TrEMBL:H8WH61" /protein_id="CCG58553.1" /translation="MVTSSVSGRLSRSRTKFRRDSRSRRQTPTSEMRSFVLLILLTSH LSAGSIDWSSLETPPQFTHGKNAETVFFKVEKSGMSDESAKNIPGNLLEQTIHCQAIG NPRPTYRWKKDGKTFLPSMFPEKVVQKPGEGSLVFSRLDETDAGLYQCEAENSNGTAV DRPVRVQETWIRHFKAAEPEVVVVEVGDPYQRNCSPPASNPNARVYWILMGKEPGHFE TISSSHISSNEQGTLFFHYVNETDLKSDRYYTCTAENIELKDYKFGNQFSLQITNYKR RSLQQMPPTEQYVNQSSPIALQGNQHKLHCFFSGYPAPKPRWYHNGKQINEDGDSDGF RFESYGKTLVFNVTQDKAGKYDCRFAMQNDIDRTFNVVVEGESFFPVSNNSNDWEDDK KIVIKFCKKPNFPAPYWPNGPPPNTNTSEGENVSFDCTTYGKPTPKVTFYKNGVELGS QKDDRYMIEGTRLTIYDVKKGTYGKGDNAVYQCKSENKHGWLWTNFYLNLLAFKPQLL IDPGKEEVEAVIGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADPHGVGRLVFS EVSASEEGEYECIGTNKYGQASGVITLKVRKPTTVKPFDRAEDVRMAGEEMRLPCDAT SDSQLEVKHEWLVDGIPLPEERVNSGHYRIADDHSLIVANPTQDDSAKYKCVVSTKLD KVEKEIKIQFKGNPNIPFSHIFFTLSDVPVAVHSAYVSNCDKNSLTAFIKFDHIESIH TIAPVKEFWVQYQMDSETEGSQWRTHPSPSAAHPNDQVTDQLRTTSGSATVSLQPFGK YVFRVLARNSVGDSATTTVKGICETPAKQPDKNPGEVAAKGTSPENLIVQWKPMAREE WNGAKFHYVVKYRPVDEDQRDGDWKEVAVEDPFADRVTINLDDDKDVKPFQPYEVQVQ AVNSEGRTNVVPETVEGRTGEGVPSSIPSGLRVLEKSGTTVTLAWNGVDPATANGNFT GYKITYWVDEADQDVEEPEDDEEEKRKFRWKRSIRAKRQSGVRKTIVFGPSATQGTIT DLKPATLNHAYIQVTNGAHEGPSSDTIDFQTDEGVPSPVRSLRAYPMNSKESDEKGVV VLVWKKPRQTNGKLARYEVEYCKTQNGKQVEKTCPRQQIDADAKEIRITGLENETPYR FILRAHTSAGEGDPNSSDATTLPETTAAGVDPGVPSLVENAIGDKYFNVSFRPAKYDD ETRAPVGNTYEVQYKPQNGDEWETVKPSDDGLTVHVDGLSPGTKYDVRVAALQVDSDG GETTKTFSGISKITTTGTSPGERNLYFIILILLILLLLLIIICICCVVCRHRGQNYPV SQREREQGREPILGKPDYKTDDDEKRSLTGSKAESETDSMAQYGDTDPGVFTEDGSFI GQYVPQKSLMPAERPEKGSTSTFV" CONTIG join(complement(CAAC03004883.1:1..18402),complement (CAAC03004552.1:1..6010),gap(1000),CAAC03004149.1:1..8391,gap(443), CAAC03004150.1:1..8976,gap(1000),complement(CAAC03000318.1:1..1165) ,gap(650),complement(CAAC03000317.1:1..12044),gap(122),complement (CAAC03000316.1:1..18460),gap(710),complement (CAAC03000315.1:1..8255),gap(641),complement (CAAC03000314.1:1..9557),gap(372),complement (CAAC03000313.1:1..52501),gap(50),complement (CAAC03000312.1:1..1103),gap(10),complement (CAAC03000311.1:1..59575),gap(342),complement (CAAC03000310.1:1..5522),gap(807),complement (CAAC03000309.1:1..25340),gap(10),complement (CAAC03000308.1:1..48017),gap(558),complement (CAAC03000307.1:1..50729),gap(90),complement (CAAC03000306.1:1..3847),gap(126),complement (CAAC03000305.1:1..76181),gap(70),complement (CAAC03000304.1:1..34637),gap(69),complement (CAAC03000303.1:1..1595),gap(6918),complement (CAAC03000302.1:1..1471),gap(10),complement (CAAC03000301.1:1..16860),gap(394),complement (CAAC03000300.1:1..2702),gap(828),complement (CAAC03000299.1:1..131044),gap(10),complement (CAAC03000298.1:1..49095),gap(4508),complement (CAAC03000297.1:1..24815),gap(681),complement (CAAC03000296.1:1..37340),gap(10),complement (CAAC03000295.1:1..48033),gap(341),complement (CAAC03000294.1:473..61024),AC084644.1:23971..25005,complement (CAAC03000293.1:506..3470),AC084644.1:27973..29005,complement (CAAC03000292.1:1..57389),gap(379),complement (CAAC03000291.1:1..44216),gap(5137),complement (CAAC03000290.1:1..126626),gap(1000),complement (CAAC03004495.1:1..7480),gap(161),complement (CAAC03004494.1:1..63574)) //