LOCUS HE601244 767399 bp DNA linear CON 17-SEP-2015 DEFINITION Caenorhabditis briggsae AF16 supercontig from assembly CB4, cb25.fpc0063. ACCESSION HE601244 CAAC03000000 CAAC02000451 VERSION HE601244.1 DBLINK BioProject:PRJNA10731 BioSample:SAMEA3138181 KEYWORDS . SOURCE Caenorhabditis briggsae ORGANISM Caenorhabditis briggsae Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 767399) AUTHORS Howe K.L. CONSRTM WormBase Consortium JOURNAL Submitted (03-OCT-2011) to the INSDC. WormBase group, European Bioinformatics Institute, Cambridge, CB10 1SA, UNITED KINGDOM. REFERENCE 2 (bases 1 to 767399) AUTHORS Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R., Waterston R.H. TITLE The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics JOURNAL PLoS Biol. 1(2), E45-E45(2003). PUBMED 14624247 REFERENCE 3 (bases 1 to 767399) AUTHORS Ross J.A., Koboldt D.C., Staisch J.E., Chamberlin H.M., Gupta B.P., Miller R.D., Baird S.E., Haag E.S. TITLE Caenorhabditis briggsae recombinant inbred line genotypes reveal inter-strain incompatibility and the evolution of recombination JOURNAL PloS Genet. 7(7), E1002174-E1002174(2011). COMMENT Details of C.briggsae assembly version CB4: To improve upon the C. briggsae nuclear genome assembly CB3, 167 AF16/HK104 advanced-intercross recombinant inbred lines were successfully genotyped at 1,032 single nucleotide polymorphism (SNP) markers. The resulting data were used to estimate high-density genetic maps. Sequences were assembled by combining the physical and genetic positions of the SNPs to inform the process of ordering and orienting the cb25 supercontigs into chromosome assemblies. 37 of the cb25 fingerprint contigs were split into 100 supercontigs to resolve discrepancies between the physical and genetic orders of SNPs. 638 sequence supercontigs comprise the CB4 assembly. The total nuclear genome content decreased from cb25 to cb4 because of the removal of three supercontigs containing mitochondrial genome sequence (totaling 20.1 kbp). Assembly_name: CB4 Assembly_program: Phusion Seq_technoloy: capillary (whole-genome-shotgun) Seq_coverage: 10x Annotation details: Coding seqences below are the result of integration and manual review of the following data : computer analysis using the programs Genefinder (version 980506; P. Green, unpublished data), FGENESH (Salamov and Solovyev 2000), TWINSCAN (Korf et al. 2001), and the Ensembl annotation pipeline (Clamp et al. 2003); similarity to other proteins from BlastX analyses (http://blast.wustl.edu); sequence conservation with C. elegans using Jim Kent's WABA alignment program (Genome Research 10:1115-1125, 2000); individual C. briggsae GenBank submissions; and personal communications with C. briggsae researchers. tRNAs are predicted using the program tRNAscan-SE (Lowe, T.M. and Eddy, S.R., 1997, Nucl. Acids. Res., 25, 955-964). FEATURES Location/Qualifiers source 1..767399 /organism="Caenorhabditis briggsae" /strain="AF16" /mol_type="genomic DNA" /note="supercontig cb25.fpc0063" /db_xref="taxon:6238" CDS complement(join(5854..5993,6069..6526,6572..6783, 6838..6975,7119..7196)) /gene="Cbr-ufd-1" /locus_tag="CBG_03313" /standard_name="CBG03313" /product="Protein CBR-UFD-1" /note="C. briggsae CBR-UFD-1 protein; contains similarity to Pfam domain PF03152 Ubiquitin fusion degradation protein UFD1 contains similarity to Interpro domain IPR004854 (Ubiquitin fusion degradation protein UFD1)" /note="Predicted" /db_xref="GOA:A8WUR4" /db_xref="InterPro:IPR004854" /db_xref="InterPro:IPR042299" /db_xref="UniProtKB/TrEMBL:A8WUR4" /protein_id="CAP24226.1" /translation="MQAWLQQLNMGGPGGHMRGSYDQTFVVYGAVFLPNATQTKIAEI NYGGKILLPTSALDLLLRMNIQYPMLFKLTNMAAQRITHCGVLEFSAPEGQAILPHWM MQQLGLSDGDTIRVESATVPKATFAKLKPMSLEFLNITNPKAFLEVELRKYACLTKGD RIPTSYAGQTLEFSIVDVKPANSVCIIECDVNLDFDAPEGYVEEPRQVAPAVNVKPPP PPASAFVGVGKPLGGAATTATSVFGGAGRRLDGKKKPTSSVSLCSEGTTGASTSDAAA VANDLPAIPPVVVNEDYKPGRCSFVRYDYKRVDVLEKELREREAKEKSQPSKMFQGSN RTLRGAR" CDS complement(join(7815..7949,7996..8344,8399..8781, 8826..9023,9074..9427,9479..9624,10063..10165)) /gene="CBG03314" /locus_tag="CBG_03314" /standard_name="CBG03314" /product="Protein CBG03314" /note="contains similarity to Pfam domains PF07931 (Chloramphenicol phosphotransferase-like protein) , PF00485 (Phosphoribulokinase / Uridine kinase family) contains similarity to Interpro domains IPR000764 (Uridine kinase), IPR012853 (Chloramphenicol phosphotransferase-like), IPR006083 (Phosphoribulokinase/uridine kinase)" /note="Predicted" /db_xref="GOA:A8WUR5" /db_xref="InterPro:IPR000764" /db_xref="InterPro:IPR000836" /db_xref="InterPro:IPR006083" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR029057" /db_xref="UniProtKB/TrEMBL:A8WUR5" /protein_id="CAP24227.1" /translation="MVAEKKDGSVAVSKGDSNRKSVKIEDCPTYSHSSGSSVNEMVNQ NGGDSEDSVSPRAAGCRTRRRTMSGGRAEHHLLTTKTGKKIYTKGRPPWYDKKGKSLK HPFVIGVCGGSASGKTTVAEKIVERLGIPWVTILSMDSFYKVLTPEEIKEAHESRYNF DEPKAFDFDLLYEILKRLREGKSVDVPVYDFNTHSRDPNSKMMYGADVLIFEGILAFH DERIKNLMDMKVFVDTDGDLRLARRIVRDVTDRGRDIDGIMEQYFTFVKPAFDKYIAP CMDSADLIVPRGGENDVAIDMIVQNVMAQLVERGYDRNQNNRDRHDLVRDDLPDCLPE NLFILKETPQVKGLVTFVRDRDTSRDNHIFYSDRLMRILIEECMNHMPYKDVEIEMAG GRKTIGKRKDAMICGLPIMRAGECMETALRSIVKDCVIGKILIQTNETTFDPELHYIR LPPHITRYKVIIMDATVTTGSAAMMAIRVLLDHDVKEEDIFVASLLMGQQGAHALAYA FPKVKLITTAMDHQMTENCYLIPGMGNFGDRYYGTGIDQDFDEPFES" assembly_gap 12241..12954 /estimated_length=714 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(23248..23337,24729..24817,24868..25005,25055..25454, 25503..25607,25630..25773,26269..26310,26388..26539, 26593..26668,27371..27489,27764..27825,28627..28730) /gene="CBG03316" /locus_tag="CBG_03316" /standard_name="CBG03316" /product="Protein CBG03316" /note="contains similarity to Interpro domain IPR000615 (Bestrophin)" /note="Predicted" /db_xref="GOA:A8WUR6" /db_xref="InterPro:IPR000615" /db_xref="InterPro:IPR021134" /db_xref="UniProtKB/TrEMBL:A8WUR6" /protein_id="CAP24228.2" /translation="MTISYTLDVSQTNLQSFFSLLLRWRGSVWKAVFGQLAVWTAVFL LISCIYRYILSPSQQDVFEQLVRYFDNKLDANIPLTFLLGFFVSFVVARWGSILNGIG WIDDASLLFATYIRGADEETRVIRRNLVRYLVLSQALVLRDISMQVRKRFPTMDTLAA SGLMTHEEMDILDHIKDPYSRYWTSIQWSLNLVYECQKKGKVESYYLMNKIVDEIGKF RHGLASLLKYDWVPVPLVYPQVIFLAVRIYFMICLIGRQFIVTGSNPSGASFISFSID LWLPITTMVQFLVYMGWMKVAEALLNPLGEDDDDLECNYIIDKNLITGLSIVDTMWKH DDTGYSMVEEHMAKTPAQKKDEFWGIDKIAPLYSMESAERSVHPLVGSASKINLVKNK KEIVMTPHKNKLSELDPTEQKTYLRRVNVSDHNAKHAKQRGLERANSPDKCLSKMRSR SNGKFRTSANGSQNGVDLWTRAGDIEMNVAISNPNQVHPHSITVFPPDEPQTTSRH" assembly_gap 23705..23808 /estimated_length=104 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(29485..29602,29649..29752,29802..30110, 30158..31432,31479..31588,31635..31864,31910..32073, 32125..32409,32456..32641,32696..32756,32805..32955, 34228..34297)) /gene="Cbr-sec-24.2" /locus_tag="CBG_03317" /standard_name="CBG03317" /product="Protein CBR-SEC-24.2" /note="C. briggsae CBR-SEC-24.2 protein; contains similarity to Pfam domains PF04811 (Sec23/Sec24 trunk domain) , PF04815 (Sec23/Sec24 helical domain) , PF04810 (Sec23/Sec24 zinc finger) , PF00626 (Gelsolin repeat) , PF08033 (Sec23/Sec24 beta-sandwich domain) contains similarity to Interpro domains IPR006900 (Sec23/Sec24, helical domain), IPR012990 (Sec23/Sec24 beta-sandwich), IPR006896 (Sec23/Sec24, trunk domain), IPR006895 (Zinc finger, Sec23/Sec24-type), IPR007123 (Gelsolin domain)" /note="Predicted" /db_xref="GOA:A8WUR7" /db_xref="InterPro:IPR006895" /db_xref="InterPro:IPR006896" /db_xref="InterPro:IPR006900" /db_xref="InterPro:IPR012990" /db_xref="InterPro:IPR029006" /db_xref="InterPro:IPR036174" /db_xref="InterPro:IPR036175" /db_xref="InterPro:IPR036180" /db_xref="InterPro:IPR036465" /db_xref="InterPro:IPR041742" /db_xref="UniProtKB/TrEMBL:A8WUR7" /protein_id="CAP24229.2" /translation="MCIPRHDTFNFFANGISQQVTFLSGYTNYRRMSNIPTAPGNVGF PQAYGRNQQYQHVQQFNQFAQPSAAAPNNIGPSFAVNPFPFPTATTSNEPVKPLASSQ VPNGPNNFQVNQSKSYAPPVPSAFAGAPTGFPQQIPSFSSATQPVLNGQPPVAQPPVV PTITQPPVSSAFANARPAPFPAASASPALAPAPYQQQMAPRPQPPASYPQQTGYPSTA SQPGFPPAPPQTGYPQQYNQPQMQNMNQQFDQMKLGGAHGQQQQQMGGFRNDIIDLIA ERNIQQLGFEDITVQIPQSVAEPNAHVDPNIFRSTLVQVPQTEELLKKSRLPFAITLH PFRDVKNLNIIQCSNIVRCRYCRTYINPYVYLPDHRHWKCNLCNRNNDLPDDFCWDPV TKAFGDPRNRPEIQNATVEFIAPSEYMLRPPQPAVYVFVIDISAAAIQSGYLNTFAEQ LLINLDQMPGDDRAQVCFIAVDQCLHFFSFSSNKRYPNEMIVDDIDDAFVPSVTSLLV PMKKFKDTIRQFIKQLPEFYSQISPTSNGNCLGSALKIAQSMIQEIGGRISIFQVSLP NLGLGALKSREESTEGGQNLGPATDFYKALSLECTGFQICLDLFMFNTQYADLATLCK FITSLTSSSIYSFTAEVAKFSTGCVYHFPNYNSRNDVHQVKRFERTLTRYLTRKLGFE AVLRIRTSRGLALTGFYGNFFVRSPDLLALANVNPDSALAAQVTIEEKLPQYVCFQSA LLYTSSKGDRRIRVHTMCLPTTGDLLQLYNNFDLKATVSYLAKIGVERSMTGNALADS REALVNAVIDSVGAYQKAVSRGSGMLVPRSGHLRLFPSYVLAMLKHPAFTSGRGIRLD DRAGAMLMMRASPLDQILADIYPRLYRLNELATMPEDQTPPMLPLSFEHISRGGVYLM VTGTIAFVYVAASADPGFLVNVFGTSIYNDIDDYSLLERDNDLSRRVHAFFKQVTQFR FYLGPIITIKEHSPLRDVFVRRLVDDRSESTHSYVEFLQHLKREISGN" assembly_gap 33220..33698 /estimated_length=479 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(<35589..35826,35876..35979,36038..36296,38023..38042, 38047..38638,40443..40907,40954..41472,41518..>41663) /codon_start=1 /gene="Cbr-ccr-4" /locus_tag="CBG_03318" /standard_name="CBG03318" /product="Protein CBR-CCR-4" /note="C. briggsae CBR-CCR-4 protein; contains similarity to Pfam domains PF00560 (Leucine Rich Repeat) (2), PF03372 (Endonuclease/Exonuclease/phosphatase family) , PF12799 (Leucine Rich repeats (2 copies)) contains similarity to Interpro domains IPR001611 (Leucine-rich repeat), IPR005135 (Endonuclease/exonuclease/phosphatase)" /note="Predicted" /db_xref="GOA:A8WUR8" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR003591" /db_xref="InterPro:IPR005135" /db_xref="InterPro:IPR032675" /db_xref="InterPro:IPR036691" /db_xref="UniProtKB/TrEMBL:A8WUR8" /protein_id="CAP24230.1" /translation="LHCFSSSLTSFFSDVMASGETSTEYKDKQGGGAGQPLTKSENND GKKTLTNGMSRVHRVMTDEEIAQGRQTRWTELEIHGKVKNLSPAVWQLTHLSALFLNN NQLSRLPPEIAQLTNLTMLDISNNKLRSLPTELGDMISLCHLYLNHNQLRVLPYELGK LFRIQTLGLQGNPLSPEISKIYHETNGAHKILQFLLDHLTITFQWSAQHRSADTENNY RPPDLPHIYDYVEMATAGTRPMVFEENLSYEFLTQEEFHLKQALGHTRSFPIAILQSR RRQNHESNGYSLSYGYNEHQPCQRTNSDAHHYHSFQQPSFSHFQSSSSWNNQARSSLM NPIDNALSLITNDLSVTSLSDMSTTSPSSISNKSEEDIPANFVKILSSLPKSSNAGDL PVQNVLTPSHTFATFTVLCYNVLCDKYATVNQYSYCPSWALNWEYRKSLIIKEIRTYE ADVITLQEVETEQYRTLFLPELKTLGYTGIFAPKTRAKTMGEEERKYVDGCAIFWKVD KFDMDRQQVFEFSSVAMKKASTSENMLNRVMPRDNIALCAVLKIKENVYANRRMTIPA NDNVVGNPLVVCTAHIHWDPEFCDVKLVQTMMLAHEVSRILEDVSKKYMITQQQVPVL ICGDLNSLPDSGVFEYLSKGQITRRHLDLKSFREDSCLEKFTNSSDKNVISHPLRLDS ACDLQSIPFTNYTLDFRGMIDYIFATPQSLARLGILGPFDPQWVATNKILGFPHPHVP SDHIPIMAQYAIIPTTHQRQPPPPQQTGHPPAGVIGSGYPA" CDS join(43954..44203,44250..44377,44425..44693,44738..45521, 45571..45879) /gene="Cbr-wdr-46" /locus_tag="CBG_03319" /standard_name="CBG03319" /product="Protein CBR-WDR-46" /note="C. briggsae CBR-WDR-46 protein; contains similarity to Pfam domains PF08149 (BING4CT (NUC141) domain) , PF00400 (WD domain, G-beta repeat) contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR012952 (BING4, C-terminal domain), IPR001680 (WD40 repeat)" /note="Predicted" /db_xref="GOA:A8WUR9" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR012952" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR036322" /db_xref="InterPro:IPR040315" /db_xref="UniProtKB/TrEMBL:A8WUR9" /protein_id="CAP24231.1" /translation="MAPIKKPKPDGVKKISFNATDVTPARGVEEKMSWKEYKKMKEQV GIGMPKKLRKKKEPIANEEDSGPKKPMKLTNAQKERHDTGAGVIDPSTMRSKLQQEKM KMTKEKFERRIEATAKAEKRLVENAGFVAPDDEEDNVLTYSVRQRDIVEAVDLAAATK HFELKLPRFGPYHIDYTDNGRHLVIGGRKGHLAAIDWQTKHLHFEQNVMEKVSDVKFL HTENFIAVAQKNYTYVYDNLGTELHCLKTMYDTARLEFLPRHFLLVGGSRNSFLNYVD VSVGKQITSFATKCGTLDVMCQNPANAIIHTGHTNGTVSLWSPNSKEPLVKILAHLSA VKGIAVDDQGNYMATTGLDRKCRIWDVRMFRQLHAYSLPFGVSNVAISQKLDVACAVG NHVQVFRGMHNGTCKEPYLVHNCGGVVTDLRFVPWEDVLGIGHAGGFTSMLVPGAGDP NVDTLRSNPYETKSQRKEREIKQLLDKLQPELISLDPEDINKVNEGLLEVEEEERKKI LYIRPMSVQYTPRHKMRSKKSGWKMEARKNIVKDKIRMERNMEKHAVEKEVFGEPEQA EQSKKKHILDRLK" CDS complement(join(46019..46451,46498..46572,46621..47110, 47153..47264)) /gene="CBG03320" /locus_tag="CBG_03320" /standard_name="CBG03320" /product="Protein CBG03320" /note="Predicted" /db_xref="GOA:A8WUS0" /db_xref="UniProtKB/TrEMBL:A8WUS0" /protein_id="CAP24232.2" /translation="MDTIFRCLLMGRVAKEPVDAFPMSMLNVLQLLPCLVDWTTEGKH REEDDVSFPRQKKVTCLVDTIWLGTLLLCLPPFYSFLLAPYPSERLFLIFFFFSAYLF KIDLLSEIMALPDSELNIMKEQFKVLKDQFLEQRSQLYAATKNRENEEYVTDLEKKLK QAQQENEDLKQIIAMNQVKAGDDLKDLLMQLETEREKNKAKGYWNLTKVGLLMEKLSD RFDESEEIMLTNCQYAKTYLEPQRIQETIDRYLILIGKTVRNKKESFDDLTKQLDEAN KNAAYYKKKFDESESQLKFDARLTAQIQEKINQMSISLEGHKKLVAELEEEKKKGQRL AEGVLDDLEENHSYGDEVEKVDEDDDKEEDQDEEK" CDS complement(join(48013..48267,48428..48445)) /gene="CBG03321" /locus_tag="CBG_03321" /standard_name="CBG03321" /product="Protein CBG03321" /note="Predicted" /db_xref="InterPro:IPR001938" /db_xref="InterPro:IPR037176" /db_xref="UniProtKB/TrEMBL:A8WUS1" /protein_id="CAP24233.1" /translation="MEHRTFILTISILLLLNVGVESRTIVVYNNCPFLNWPGVFGPGN PEGEGFRLDTWTAKNLNAVDDWNGKILARTGCDEDFNCETGTCLVS" CDS join(50842..51099,53183..53626) /gene="Cbr-thn-1" /locus_tag="CBG_03322" /standard_name="CBG03322" /product="Protein CBR-THN-1" /note="C. briggsae CBR-THN-1 protein; contains similarity to Interpro domain IPR001938 (Thaumatin, pathogenesis-related)" /note="Predicted" /db_xref="InterPro:IPR001938" /db_xref="InterPro:IPR037176" /db_xref="UniProtKB/TrEMBL:A8WUS2" /protein_id="CAP24234.1" /translation="MALVKLTVALLLLAVAAESRKITIYNKCPFTIWPGILGPGNPSG GGFRLDAGQSRDINVDDAWTAGRVWARTGCDGNFNCETGFCRNSEQCNGAGGVPPASL AEFTLKAWGGQDFYDVSLVDGYNLPVLIDPHGGSGCKRAGGCVKDINSECPAALSVKG HNGNTVACKSGCLGYNTDQECCRGAYGTPDKCHRSATAQMFKDACPTAYSYAYDDSSS TFTCQATASYTVQFC" CDS complement(54105..54815) /gene="CBG03323" /locus_tag="CBG_03323" /standard_name="CBG03323" /product="Protein CBG03323" /note="Predicted" /db_xref="GOA:A8WUS3" /db_xref="UniProtKB/TrEMBL:A8WUS3" /protein_id="CAP24235.1" /translation="MKHKLCLLLILAIVLSSIADSDSSDDDDKNRDEPSKDDPIDEQD DNTDEEKEGGNGDGSNQDGGTEEALATEAPTSEEKKEGKNKNKTKAKDELSDWDIDKM FGDQANEPKSEDNSTHHTQAPSPSGSGAGSGFSAGTGNSGNVGGGGWLGSLFGSGGLI GNLDATSAPVTTPQSTEPAKEESKDESGGTQGSHGTVGGNSFYPLPRQVDIWDRLFVL AAFPICFFAVLLKAEMFR" CDS complement(join(57729..58176,58223..58368,58412..58588, 58632..58729,58776..58866,58915..59034)) /gene="CBG26383" /locus_tag="CBG_26383" /standard_name="CBG26383" /product="Protein CBG26383" /note="Predicted" /db_xref="GOA:B6IFE2" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR036179" /db_xref="UniProtKB/TrEMBL:B6IFE2" /protein_id="CAR98622.1" /translation="MQEMDLTPITLPELSLISGSMVTFECDQENRKKNGKKKEEVEFV EWFVNGKRIDPSWFDWRVSVSIDGKLGVWPIGVDDSGHFECLADGQLKSSVTVKVIPV STVLISGLFNYLFVCAVFAVATTSIGCLLGNRNQEKKEVEVDRMEDFLAENVFKTDQM AKERVAKLIEQQGMVDEQHLIENKAKSNRSTIMILLQKPQMKNLKNQNANNTTSTDTG TEGTSTGKSSDTNVTTTGTTTGTTTVETELGTTVMKTDEEQIGASQGEALPDEESEED EEVGAGASSNGSTGTSNASKGTSKGNKTKKASKDKKNRKTTKKSAGNGKKNVKQASKP KEAAKGAVKNTKKKTVSKPAPKKKR" CDS complement(join(59867..60013,60219..60339,60390..60553)) /gene="Cbr-rps-23" /locus_tag="CBG_03324" /standard_name="CBG03324" /product="Protein CBR-RPS-23" /note="C. briggsae CBR-RPS-23 protein; contains similarity to Pfam domain PF00164 Ribosomal protein S12 contains similarity to Interpro domains IPR005680 (Ribosomal protein S23, eukaryotic/archaeal), IPR006032 (Ribosomal protein S12/S23)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WUS4" /db_xref="InterPro:IPR005680" /db_xref="InterPro:IPR006032" /db_xref="InterPro:IPR012340" /db_xref="UniProtKB/TrEMBL:A8WUS4" /protein_id="CAP24236.1" /translation="MGKPKGLCTARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGA SHAKGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDEVLV SGFGRSGHAVGDIPGVRFKIVKVANTSLIALFKGKKERPRS" CDS join(61060..61188,61472..61600) /gene="Cbr-dpm-3" /locus_tag="CBG_03325" /standard_name="CBG03325" /product="Protein CBR-DPM-3" /note="C. briggsae CBR-DPM-3 protein; contains similarity to Pfam domain PF08285 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) contains similarity to Interpro domain IPR013174 (Dolichol-phosphate mannosyltransferase subunit 3)" /note="Predicted" /db_xref="GOA:A8WUS5" /db_xref="InterPro:IPR013174" /db_xref="UniProtKB/Swiss-Prot:A8WUS5" /protein_id="CAP24237.2" /translation="MASQLIIYSAHVVLLVLVWLLAYTEVVPVLSYIPECAHCLVYYI YAAFNVIYGVATFNDCAEAKVELLQEIKQARAELKQKRIID" CDS complement(join(62023..62177,62226..62840,62893..63009, 63054..63398,63447..63608,63657..63855,64562..64661, 64706..64801,64851..65027,66701..66789)) /gene="CBG03326" /locus_tag="CBG_03326" /standard_name="CBG03326" /product="Protein CBG03326" /note="contains similarity to Pfam domain PF00501 AMP-binding enzyme contains similarity to Interpro domains IPR020845 (AMP-binding, conserved site), IPR000873 (AMP-dependent synthetase/ligase)" /note="Predicted" /db_xref="GOA:A8WUS6" /db_xref="InterPro:IPR000873" /db_xref="InterPro:IPR020845" /db_xref="InterPro:IPR025110" /db_xref="InterPro:IPR042099" /db_xref="UniProtKB/TrEMBL:A8WUS6" /protein_id="CAP24238.2" /translation="MTDRADCSTATTNWRKPKPLATDVLEKPARLLPKMKLEELVTVM LLTVAAIDQYLPIGLVLAGVLLLYITVVHGDFIYRSYLTLNRDLTGLALIIEVKIDLW WRLHQNKGIHELFLDIVKKNPKKAAMIDIEKDTTETFEEFNAHCNRYANYFQGLGYRS GDVVALYMENSVEFVAAWMGLAKIGVVTAWINSNLKREQLVHCITASKTKAIITSVTL QNMLIDAIDEKLFRVDGIDVYSVGEPKKNSGFKNLQKNLDAQVTSEPKTLDVIDFKSV LCFIYTSGTTGMPKAAVMKHFRYYSIAVGAAKSFGIKASDRMYVSMPIYHTAAGILGV GQALLGGSSCVIRKKFSASNFWRDCVKYDCTVSQYIGEICRYLLAQPVVKEESVHRMR LLVGNGLRAEIWQPFVDRFRVRIGELYGSTEGTSSLVNIDGHVGACGFLPISPLTKKM HPVRLIKVDDVTGEAIRTSDGLCIACNPGESGAMVSTIRKNNPLLQFEGYLNKKETNK KIIRDVFAKGDSCFLTGDLLHWDRLGYVYFKDRTGDTFRWKGENVSTTEVEAILHPIN GLSDATVYGVEVPKREGKVGMASVVRAVSFEENESQFVERVGARLSSSLTSYAIPQFI RICQDVEKTGTFKLVKTNLQRIGIMDTPSDSIYIFNSENRNFVPFDNDLRCKVSLGSY PF" CDS join(72213..72749,72793..72972,73020..73574) /gene="Cbr-kca-1" /locus_tag="CBG_03328" /standard_name="CBG03328" /product="Protein CBR-KCA-1" /note="C. briggsae CBR-KCA-1 protein ;" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WUS7" /protein_id="CAP24239.1" /translation="MADESEVMIGEDVLSTYYSTTSNSDSSSGSAPLTTSTTSASSSN SSTNRHEPGLLNFFRRRSWFGFGGAAEYAKKKEDVDTIQEIIKCYQNNDVPGMEKFVH EETKITVCETEKWKDGEGMWWDDEEVLRPKRVEENLKEVPFGKNTPHPKKGVSMLPPR VLKAVRFDVENTPEDRENRPFTPLFTSTPKHFGTECDSDDELRPLRECDSNTVLLPVA VHNNTSSILLASTSVMTSLNKCHQETTDALCLPFNKNIYKICYDDTDEEEVAEEALPS ETPTPSRGTFVVEMEGSEPSSKTMSGRDQSFDQLDISTDSSVILNLDCIDNYIQRLDD EIAAANRFAREKDMVRAMGAVQQARLLQERFEQMNDAINEMCSKLPDDFECPNAVEDD KSYHDLSAVFEDSQWGARLGSEAGSFNGSQL" CDS join(73997..74111,74154..74254,74300..74449,74497..74868, 74913..74961,75007..75217,75265..75574,75626..76364, 76409..76633,76677..77498,77545..77657,77702..77917) /gene="Cbr-gex-3" /locus_tag="CBG_03329" /standard_name="CBG03329" /product="Protein CBR-GEX-3" /note="C. briggsae CBR-GEX-3 protein; contains similarity to Pfam domain PF09735 Membrane-associated apoptosis protein contains similarity to Interpro domain IPR019137 (Nck-associated protein 1)" /note="Predicted" /db_xref="GOA:A8WUS8" /db_xref="InterPro:IPR019137" /db_xref="UniProtKB/TrEMBL:A8WUS8" /protein_id="CAP24240.1" /translation="MSYKIEASQLKIAEKLVVLNNRAVGMMTRMYNIKKSSGDSKVKP YFLSDKKMEGAIKHIVRKFPVVDCRSNTSTFEHVQAMSAEVTKSLSLYYYTFADLLDL KDHIMQVLTTMETCQCQLDVTLNYDLTTGYLNLVVNLITMMILLSRIEDRKAVLGLFN AGYDLQHGQSEASFPRLGQMILDYENPLKKLSEDLGPLNRLIFSALSSVGPSYLRRNK TAEYWRTSNIFSLTAAPGQILYAAQTETMACEYLSIDIIDRWIIFCATICHSSLLNDA NILSMWQAAVQTNFCIRLFRDETFLTHQEIQTYFESTKDKSKRLQDLKEAIHMSSSSI GVHADRRRFLRSSLRELSLLLRDQPGLLGPKILYVWMALGAGRDEVIWLLRHQVEMPL IAKKGNKTIDELIDRQIPELLFYMLELRDLVVKYSAIIQRYYLQYVSSYDSIVVTEEI NHASGLSTDEAILLTDFANSISNINSDTDLRALRLDWFRFQAWVSVSRNNFQLLKHRK LANFMNTSVFHLKMIDLQDEMLRETSDLSIYCFYPKLAERHWINCLQLPAQARYVLSF ARLAGHFTSALHDMCPEEKTFITEKALAQCNSVIEETCRQVSFVLEKVAEHEFGLAYQ MTPSAVSVRVIAQVLQQKGGKAAAAAAAAAKDYFVAGEESHRVDRQALTMPDKLQTTL LELCAALGVHRQIHVADHTFAPRTYLSQSLESTFVDLLHRMLWEGQENASNPRRPSEM LLALQAYMTVFQNLDTAISVDISNTMQAILLQQTQSVDSRNKDTITAFYTKWYLEVLL RRASAGHMIWSEHQRSMLAYGQEILPVMPDQYSDPQELRALVQIIGPYGIKFMSERLI WHVASQIMEMSKIVGSYKEALQVARSNFDNAEKMKEVLNILSAEPKDKKGTNTPCAAD AILQRTIIIGQICAFRDALHDALRDVVDSKLPFLQSSFNMFYQNLDYVAKVKMGEMSA ALGVKGPVDMSLVNAVRAQNQNAHPQEHYINSCLLMVAIAVSIPRIGMVDQSTYKPSI QAALNNSHCVPIAINTIGSALFHLHDQNDIPMRMKEFLALASSGILRTIHERDNGRTA PDDALRSHNTLYIILEQMVRKNHWISMNVLEACFPYNLVRTAYQQCYEAEPQ" assembly_gap 78646..79273 /estimated_length=628 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 80356..80381 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(81088..81162,81209..81327,81368..81534,86741..87051, 87097..87450,87494..87601) /gene="CBG03330" /locus_tag="CBG_03330" /standard_name="CBG03330" /product="Protein CBG03330" /note="Predicted" /db_xref="GOA:A8WUS9" /db_xref="UniProtKB/TrEMBL:A8WUS9" /protein_id="CAP24241.1" /translation="MNSQNSHRGWSLLKYKEIKRSGREVYNDVRVLLDEPKRILTVFR GMEELERIYCNMEVSKFPCLKMKGPQLYVMVNAQSQGFRLTFRDKDRNQFMSTIRRIA YISETPEKNHLNKTFTNTGNWGTGSGKKKNAFTSSQPVSSSDRPVPSSTQRPAARNLA NSLQSDFFTNRTTTSSFATPATFYSQPVHNPYSRPISSASSVSSSISSALSSLNDDSP FFNFSQSSRCSSYMSSPRSDLIRSPYSGSQVSDGSSYANLVSHSQGNSSQHSSDPFTQ FSPPVTTYNKCVQTDGSMIDNLAKDPIFIGKFLERMVKSSKHVNLVRAMREQIRKLPP GKLADFSEKTKQTSSKDSALSSSIQPSMHHEKSDLEYDVFENA" CDS join(87865..87931,87983..88159,88438..88696,88742..89327) /gene="Cbr-acl-13" /locus_tag="CBG_03331" /standard_name="CBG03331" /product="Protein CBR-ACL-13" /note="C. briggsae CBR-ACL-13 protein; contains similarity to Pfam domain PF01553 Acyltransferase contains similarity to Interpro domain IPR002123 (Phospholipid/glycerol acyltransferase)" /note="Predicted" /db_xref="GOA:A8WUT0" /db_xref="InterPro:IPR002123" /db_xref="InterPro:IPR032098" /db_xref="UniProtKB/TrEMBL:A8WUT0" /protein_id="CAP24242.1" /translation="MEVEKDDKKRESSIIDHVISWILFIYAGIVTSFISPIVLICLFY SASFLLISTECRKIVMRILARASNLQFITCVRMAGIKVMMSGENLDRLADCRALMLPN HLSLFDHFIFMAAADSFGINAVGRWIFVIYNMWIYTPLGWLWSSYGNYFIDSVPIHKR EETLSHLRRHFDRIYHEVDLRWVCLYPEGSRLFLIQKRNADYEKKKNLPALQHCAYPR LGAALSAIKVLGPDPADSSKANNGRGPPLKYLVDVTLGYPDGIILPTHEAFLSAWLNG GGKPYAIHYETFEMDPKWSDEEELRKFLFDRYQKKDKLLDSYYKTGSFAPDAKEAPLP SYMILIGFQILQLTIFAFVTKFFLSFIF" CDS complement(join(89567..89717,90243..90391,90810..90899, 90997..91113)) /gene="CBG03332" /locus_tag="CBG_03332" /standard_name="CBG03332" /product="Protein CBG03332" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WUT1" /protein_id="CAP24243.1" /translation="MSYQHEVVQYAPTEDNEIHALIRGKPSFCKANIRVSTQQFQERL SYLDKRYDHLRKMTHSLRKKVNELEDIMRMDNDEENMETIKKLLEEIKKEKQLMRDEA HIIKGELSKTMYNEDLRRRLAGEWKKIDADRKSSAAESEASSSMIGDDDTPSTSSDGH KPYRETSM" tRNA complement(93085..93156) /gene="CBG28806" /locus_tag="CBG_28806" /standard_name="CBG28806" /product="RNA transcript CBG28806" /note="C. briggsae predicted tRNA" tRNA complement(93383..93454) /gene="CBG28939" /locus_tag="CBG_28939" /standard_name="CBG28939" /product="RNA transcript CBG28939" /note="C. briggsae predicted tRNA" CDS join(102326..102459,104133..104430) /gene="CBG26384" /locus_tag="CBG_26384" /standard_name="CBG26384" /product="Protein CBG26384" /note="contains similarity to Interpro domain IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IFE3" /protein_id="CAR98623.1" /translation="MPFPLLIWLLFHLLPLPTSNCSSIIFLNMFNSKSHALTMMPLAE RLSDDGHDVSMYTISASRMKISSLKVKILESLVNKMEGRTDDTAPDTSGVSRIFWNYE MVPHYGSWCYEIAMRYLEEGKDGRKLLFLNILNLFSHFQIK" CDS complement(104596..105354) /gene="Cbr-col-130" /locus_tag="CBG_03334" /standard_name="CBG03334" /product="Protein CBR-COL-130" /note="C. briggsae CBR-COL-130 protein; contains similarity to Pfam domain PF01391 Collagen triple helix repeat (20 copies) contains similarity to Interpro domain IPR008160 (Collagen triple helix repeat)" /note="Predicted" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/TrEMBL:A8WUT2" /protein_id="CAP24244.2" /translation="MFANNAWQDMIPVTRPSLDNQSNLRAIFGREKRQAGQCNCGAQP NNCPAGPPGPPGAPGAPGDDGHPGEAGKAGVNGISLISHEGETGCIKCPAGEPGPAGP DGAPGAPGPDGQPGQDGPAGQPGAPGPAGPQGDAGAPGNDGAPGAPGAPGKDGQRGQG QPGAPGAPGPQGPAGNAGQDGAAGAPGQQGPAGPPGPDGQPGQAGQDGEAGPEGAAGQ PGADAAYCPCPARTGAVENKPETSGYRRRVSKVV" CDS join(105563..105617,108991..109376,109426..109728, 110338..110535) /gene="Cbr-ugt-65" /locus_tag="CBG_03335" /standard_name="CBG03335" /product="Protein CBR-UGT-65" /note="C. briggsae CBR-UGT-65 protein; contains similarity to Interpro domain IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)" /note="Predicted" /db_xref="GOA:A8WUT3" /db_xref="InterPro:IPR002213" /db_xref="InterPro:IPR035595" /db_xref="UniProtKB/TrEMBL:A8WUT3" /protein_id="CAP24245.2" /translation="MTDFKSASPCLLYSDVSLYDTSFQIYSGPVASSYSEASGKLLGV DGATKSRIFEESILTVNDFPDTFSFIQPRGSDLIRVGEHCASSRNLPSEFRNFAEDPI SKGTIYVAFGSYVNLEDGPEGTVEAFIEALNFFEDYRVIWSHKGNVTGVKCHVKLVNW APQKEILAHENTVAFITHGGLKSAKEGVCSSVPMLFLPFYGDQPRNAHRFVTNGIAEA LYKKSITAIDIKQKLEKLLEDESYRANVAKVRSYYLDAPMSSLDLGAFHISRVLRHPE SHFVRFKRRSISMNHLQYLNIDIFLIILIVSFLIFKA" assembly_gap 107027..107441 /estimated_length=415 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(110696..110753,110800..110853,110904..111061) /gene="CBG26385" /locus_tag="CBG_26385" /standard_name="CBG26385" /product="Protein CBG26385" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IFE4" /protein_id="CAR98624.1" /translation="MFILSFFFVSRFVLVYCDTDDHIQEFLRNKTFHDVIGLSQKYQR TKYLESQQKLSDESQARLVLADETVMPCDANWHQYADNGCCYRVR" CDS join(111364..111558,111606..111998,112113..112209, 112254..112363,114465..114563,115730..115885, 115932..116525,116573..116669,116716..116930) /gene="CBG03336" /locus_tag="CBG_03336" /standard_name="CBG03336" /product="Protein CBG03336" /note="contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domain IPR001304 (C-type lectin)" /note="Predicted" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:A8WUT4" /protein_id="CAP24246.1" /translation="MKRLGQNATTLLQISDEKSDWYGGTNICKALNPDAHMGSFHSQA ESLFFANKYTSIHAWTGLSQTEVPNTWTYTDGTPDWHWFPALTATPSSADSSCVEMMD GLLGLLFALSLQKGQTNPYSCTEVNQIICKYCPKETTSSTTTTTTTTTIPTTTPKTTT TTKSTTKTTATTPSVPVSCSSTCPGQSIGINGKCYKMCRGSVKFEDSCTLCGGTTPTI YSKEENDFISRVFGANDATPSRTWIANTATNGYQNWADGQPLRPYEWTTFRKATNSEM QKSNSAEDAPATSAGVAENRWLKSDAMSEWYGGTEICRALHPEAQMASFHSQAESEFV CKKYSAIHAWTGLSQTGTPGVWTYTDGTPDWHWFFAQSSTMTPESSCVEMMDGILVLL FSWSAKKGQTQPYTCTESIASICKYCPTTTTTTSTTTSTTTTTPTTTTKITTTPTTTT TTATTTTPTTTTETTTTPTTTTVTTTTPTTTTTTQTTTTETTTTPTTTTETTTTPTTP TTTTITSSTSIKITTSKSAISCTTSNCPAQSVSFNNKCYKMCRGSVQFAESCTLCGGT TVTVTNKEESDFISRVFGENDATISQSWIGNTETSGYLNWADVQPLKPNDGLSYCISI DLSAGPSRGKYNYLQCASNVVSSICVV" CDS join(117962..118075,118122..118289,118338..118745) /gene="CBG26386" /locus_tag="CBG_26386" /standard_name="CBG26386" /product="Protein CBG26386" /note="contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domain IPR001304 (C-type lectin)" /note="Predicted" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:B6IFE5" /protein_id="CAR98625.1" /translation="MILSCVLFLISVTLLSFAEVNPCDSNWHYNNNTGSCYKTSTEMG TWFDGSAICERMHKGAQLASLRTEEESKFVAKVHRNGLDGIHAWTGLSQTKTANNWTF TDGSKPWFTFVSPYLFPSNLTSCVEILDNWLNELFQNSGKTQPIFCYHYRKALCKYYP APLTPIKTTVRTPAARIEKAHPRSVQSEIVSGYSAGTVQNQGADKKPSNAGPVSTSVH TGSASNKTGTP" CDS complement(join(118872..119180,119229..119425, 119471..119627)) /gene="CBG03338" /locus_tag="CBG_03338" /standard_name="CBG03338" /product="Protein CBG03338" /note="contains similarity to Pfam domain PF02230 Phospholipase/Carboxylesterase contains similarity to Interpro domain IPR003140 (Phospholipase/carboxylesterase/thioesterase)" /note="Predicted" /db_xref="GOA:Q61YZ4" /db_xref="InterPro:IPR005645" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/Swiss-Prot:Q61YZ4" /protein_id="CAP24247.1" /translation="MSSQPKLRILCLHGYRQCDQSFRQKTGSTRKLVKALADFEFVNG IHSVAVDEHSETSRAWWFSNADQMSFSSREPTDVSVGFDESVNAVVKFIEDNGPFDGL LGFSQGASMVHLLIAKAQLGEIKLPGIRFAIFFSGFLSLSSKHDTLTSLRIKDFPSMH VFGDSDEIVARPKSEKLADQFDMEPIRIAHEGGHLVPSMSKHKERITQFLREQMAPIA SA" CDS complement(join(119790..120359,120437..120571)) /gene="CBG03339" /locus_tag="CBG_03339" /standard_name="CBG03339" /product="Protein CBG03339" /note="contains similarity to Pfam domain PF02033 Ribosome-binding factor A contains similarity to Interpro domain IPR000238 (Ribosome-binding factor A)" /note="Predicted" /db_xref="GOA:A8WUT6" /db_xref="InterPro:IPR000238" /db_xref="InterPro:IPR015946" /db_xref="InterPro:IPR023799" /db_xref="InterPro:IPR039212" /db_xref="UniProtKB/TrEMBL:A8WUT6" /protein_id="CAP24248.2" /translation="MFKSGVRFISTSSVALKGPRNYVNRKTGRGCGNAVLSKFEWRYD KAIGKTFQKTMGTRFGIDMGLEDRLLLVSLGTKQRRLDDKKVVQLSRILEERIGEVIS TDDILGQLQLHITRVRVDRGFTQVSVYWMCRGEGDQEVVEILETSKHQIKRQVSESTG ITCPELKFVGDKSLLMGQEMDKLFREADYGMDYRSLSKSASVLGNVKEEREENVTRTK NTPRWLTDLRQKSSRE" CDS complement(join(121102..121407,121459..121980, 122025..122126,122176..122244,122350..122440, 122491..122630,122678..123155,123202..123917, 123966..124936,124984..125332,125402..125443)) /gene="Cbr-dpy-26" /locus_tag="CBG_03340" /standard_name="CBG03340" /product="Protein CBR-DPY-26" /note="C. briggsae CBR-DPY-26 protein ;" /note="Predicted" /db_xref="GOA:A8WUT7" /db_xref="UniProtKB/TrEMBL:A8WUT7" /protein_id="CAP24249.1" /translation="MDVSTLNNVTGRRKRNAAVEGAADDSFEGATPMRKVRGNKKISE DDVVSNDVMKNVNSCIEVVKRKKGLGMTNCFDYKSPLELYGIEQMIEANASIQDMSVV LDTAQQIIGYRVDRLHQDVRGLDQMLSSGDLARGDGNDETVHLTVESRRAKKKMAVAD GVTGMNAYLKNMGDEEAMNIIEGEPQQNEEEEPPLGGEAVVDVKANSKDVDLFLENED VDEVINALVTNRTAEFRGLIGEKHSTFVTSDETAYDIKDASIDWLRTNPEFQKATKGS LDNNTNSFHSLNYYGMHSENGRTLFLHSRVTDPNKSDRYFTGDVSVGLAKNTRVLLEN SLEKKPHILDNYLMLEIKERPVIGTYKDMNKDSKKVLPLAEGSHDRDLTNMTYSDANN RAANLNATVVGASDMSMLPGHQGLPLASGEDNGSIDPANQTLSAVNPLTSSNDDYVPP TMKQLELEESLIGKLPHDPMEMDKLVQIFEEKIESAKSSDAVDSKVWKNGLRAEEWGD DDEAVMKSDTRSAVQSGMDGWIKATDAWTNYDVVKMIVNRDARMQLDETAIDEQDSHR NLAPDIGKSYFLVRSEEYTNGYPADRTADKEQPGDKADVMKMWSGEEDIDDIPLEQIQ KKIREQDKDVDDDLEPIEDADFDAGGVDFNADFDAGLAHADFDDIVAPVIKTAASDDV ADIIFNDQMEEVEAEVRNERDIQKGYERIALGNDEVAELMTSAPPEQMVGPTAEMRDE IRNIGRNDNAHWTAPEIADQEKFNAVAAQRKRREKKSKSRKATVEDFVHYFRDIPIDE LEREMTAVKCIKIADEKSTFLTEQQLYLPTLGLENKPHVAFEMGLLGNNGLFYKKSYG KIKLERIKQYKNEQDIYIDETKGNKDSDCLNWLATFSGFKCMENPEAVSDESFGGDNE AQVVQPYDNDVDDLFEYDRYDPRHDQELAAAQMGPEMQKKFALTTNQISKMMFLRDIL NEREDDDTVDEFDDSFDRQTIQAKNLDAAKHKKCLAEILKSDKLSMPSIQYALEQLSV GNNGRLNNTTVVPAEPTIRETPSPERSFEADKTLISVFEYHSPTTSNHNIGEIMKALT EVPDYKEEEKEEVVPDKPTTSEYGTANTENRQVKIRGCHTLLSLALSMPSKMGENVRP SSIVSFLLHIANENGLNIIQDRSKRSWMSDFIVLNRSQALPRGLKMGNLDEQNEFWKR TQDPDAIEGGGGGTEGNSVFGELANRPKAVPARRGRGVQRGPSPGLGAINEDDEMEE" assembly_gap 125903..126306 /estimated_length=404 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(129149..129650,130210..130652) /gene="CBG03341" /locus_tag="CBG_03341" /standard_name="CBG03341" /product="Protein CBG03341" /note="contains similarity to Pfam domains PF07686 (Immunoglobulin V-set domain) , PF01682 (DB module) contains similarity to Interpro domains IPR013106 (Immunoglobulin V-set), IPR002602 (Domain of unknown function DB)" /note="Predicted" /db_xref="InterPro:IPR002602" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR036179" /db_xref="UniProtKB/TrEMBL:A8WUT8" /protein_id="CAP24250.1" /translation="MPRWRHAVLLLAFLSSSAGLDTSNSTSTAKKGSDGPHLTTDDEG FLTVIQGFATQLQCVLNTCSNDVIWYKDGNQISKGSQFLNTTSEKAYKFQHSIEVDYE KGCSGECDDSKPCGEGYSCVDNQCCSCRREEFTLVLRNLTFDESGRYRCQLGNKSELL EFQVEVLESGLKGGFHENISYDHSECCQEKGISPLCRGMCKPSEMDQHHFDPTSCKTD DYKHFLSCATEGGTRSHVHCCKTQLVPSFCYDFCSGDFQMLRRSHRLCLYYLPEIFSC LDRAYRMLSNEKGGLSSARGGGAAAHLSAFMIDKPVRG" CDS join(130775..130980,131034..131455,131504..133584, 133632..134210,134259..134577,134628..134788) /gene="CBG03342" /locus_tag="CBG_03342" /standard_name="CBG03342" /product="Protein CBG03342" /note="contains similarity to Pfam domains PF01682 (DB module) (3), PF07679 (Immunoglobulin I-set domain) , PF00041 (Fibronectin type III domain) (2)contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR003961 (Fibronectin, type III), IPR013098 (Immunoglobulin I-set), IPR002602 (Domain of unknown function DB), IPR006150 (Cysteine-rich repeat), IPR003599 (Immunoglobulin subtype)" /note="Predicted" /db_xref="GOA:A8WUT9" /db_xref="InterPro:IPR002602" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR006150" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR036116" /db_xref="InterPro:IPR036179" /db_xref="UniProtKB/TrEMBL:A8WUT9" /protein_id="CAP24251.2" /translation="MNYENRRFSISVPYPDPPTSIEVNPVDHDKLSVCWQEPEKHESN KMFPILDYAVYYKEIPNFPLLGGDMGLPLLTGDYSDIGDIQEDEYQQEEDDAEEVVKD STIAPRGKRDVDFESDGIKVAVREKRSTMVIVTRDDVTNSTTIREFAFRNINTTDKCV TLPDLRSATRYIVYVTARNEYGTSVPSVRNIASTNVHMVKNNASLPDAMKCCTAANVS SFCSSKMCNVAEDPSSFSTITIATTCRAEWPKVSPCIADGRNHTDCCLKKGVQHDCLE ICSGSTKELGVHSVLCLNLDLQAIYQCIRQGYETHPSAPGNVTISDLTAHSVTVHWTE PDSNAHLVENYTMFIRKNEHGEPVRTVHNVQSPHVELGLDPDSEYVLTLQSHSTNGTS LPSTAKLFTTLPTTRPPLCTIGEPIYMNDGRVMICDNVNPCPNGFRCTGAGSDLSYCC PHDGTHSSEEFTSCCKDQKMPEKCMNSCQYNSTLGEDCKENLNIWVQCASEGHDHLRC CMREDVSKPCQTACMHPFTVSTDECFAEVPKYRTCFNGLHLALPAVVRDLEVTSITKD SATITWEDVEANVIVFRVQLFASNGSLVNTVNSTADIYRFSDLSSATNYSVRVTAINL QGEGPPSWNVSFVTRPAQVYDGDRPVAPDGLHVAWNSGPRVNVTWNRVTVRRNNDPVS HPIEYTLYYLETEHSSTWTTLKTNNTWVVMRDLRKDALFYVYVTAKEEDKISRSSSII TVLAQKDSLGLPEPVITIEPDHKDGVLMPGEKITVNCSLPNAKKHLNIDLTVGHQVVQ NDHGVFWVILDTEADESIDTATCAVSDTDGRQHVAMKHLVLQRKASVTMKKDKIRVLD DQSVEIECIYRGGGLDPKISFEKDGKKATRGFLNVKQTEAGYVAKWRIRKVKQDDAGI YKCVVTSEDSEPVEASSEVIFTTETLPVNPKMILQCCEDEGITGDCLQACNIGRVALS AKTQNCSRFATSLLKCASDIRDHSDCCIASGVTPKCLPLCSGDSFSKDVDCSDHAVSI MSCFVKSHEHAPTKVSNVRVKSSEGKVNVEWDYPLTKDYKYFAVYYRKTNNAQDDDWH KLKTVQQNIEIELDTSEDYEVGILAANALGNSPLTYAAVPKDSDSNRSPSAKGSSSAF WIIVILVVFGICIAGLAVLGKRRELPYPFGKFIGRRNDPNQPTVAFENPAYGEPWGGP EVEIRGLGGASGAGGAAAGQSEWQSANLEANNATDNSHEYRNGMRYAKLET" CDS complement(join(135073..135195,135241..135585, 135631..136038,136088..136177)) /gene="CBG03343" /locus_tag="CBG_03343" /standard_name="CBG03343" /product="Protein CBG03343" /note="contains similarity to Pfam domain PF02567 Phenazine biosynthesis-like protein contains similarity to Interpro domain IPR003719 (Phenazine biosynthesis PhzC/PhzF protein)" /note="Predicted" /db_xref="GOA:A8WUU0" /db_xref="InterPro:IPR003719" /db_xref="UniProtKB/TrEMBL:A8WUU0" /protein_id="CAP24252.1" /translation="MTEHYPSYIVDAFAKKRFSGNPAAVCLIPQVKKDEEYLKIASEL NVSETAFPVPIGSSDFSKCSQFSLRWFTPTAEVPLCGHATLATSHVLFNELGNPNQEI RFNTQTGILVVKRDDAGNVELNLPEYDLTSIKFHHTVNPLHGVFSEFKAPHFLFDIVK CVVPTEMSIEACMYAAKPRVLVVVVDPLTTKFELEAVKIDVPKILEIQNNGFLQGIAL TLRPKNALIQGFTDSSDEPFDYACRYFAPWLGINEDPATGHAQCAMGPLWSKITGKKE LYALQAFPNRGGLFRLRFHDGRVILNGPSVTVLRGEITLDEPTFY" CDS complement(join(136457..136570,136622..136966, 137007..137459,137504..137593,138374..138460)) /gene="CBG03344" /locus_tag="CBG_03344" /standard_name="CBG03344" /product="Protein CBG03344" /note="contains similarity to Pfam domain PF02567 Phenazine biosynthesis-like protein contains similarity to Interpro domain IPR003719 (Phenazine biosynthesis PhzC/PhzF protein)" /note="Predicted" /db_xref="GOA:A8WUU1" /db_xref="InterPro:IPR003719" /db_xref="UniProtKB/TrEMBL:A8WUU1" /protein_id="CAP24253.2" /translation="MYAIRSALGTTSILRNTQEALGFIRINKEMPENYPSFIVDAFTS KSFAGNPAAVCLIPQVLKDEAYLKVAAEFNLSETAFPVPIGPFDFKQCSQFSLRWFTP KTEVPLCGHATLATSHVLFNEIGNVNTEIKFDTQSGVLIVKKDESGNVEMDFPEYDLT SIKFNDTPNPLHGILSEVRFTSFIHKKRFQLQFEAPPFLLNIIKCAVPAEMSIESVVY SSKSKKLVIVVDPETTKFELESLKTDNSKMLELHDGSFVRGLAITFCPSNPLTQGFTD SSNEPYDYVCRYFAPWVGIDEDPATGSAQCVMGPFWSIMLGKHELYALQAFPGRGAQF RVRLRDDRVVLNGPSVTILRGEIALNHY" CDS join(139315..139554,139916..140125,140201..140359, 140407..140616,140663..140836) /gene="Cbr-sru-27" /locus_tag="CBG_03345" /standard_name="CBG03345" /product="Protein CBR-SRU-27" /note="C. briggsae CBR-SRU-27 protein; contains similarity to Pfam domains PF10322 (Serpentine type 7TM GPCR chemoreceptor Sru) , PF02118 (Srg family chemoreceptor) contains similarity to Interpro domains IPR003839 (7TM GPCR, serpentine receptor class u (Sru)), IPR000609 (7TM GPCR, serpentine receptor class g (Srg))" /note="Predicted" /db_xref="GOA:A8WUU2" /db_xref="InterPro:IPR003839" /db_xref="UniProtKB/TrEMBL:A8WUU2" /protein_id="CAP24254.1" /translation="MSAPAVPYTPPVPGIHGNESYINFEFSFFTLPMFLLTLPLLYVP ITIIIILRIFVKLLYGMRDKNVNVPLFSAISIAYFVSILFFILDFVFVRLFTAGVFTS WCASVEPNHYLIVLYTATYYVNYASMVFPFLVSTMRLILIAYPQNQMKINRTLLRIAI PMIFIYPIFSTFFMFPAVGYCSQARGPFPFGSVLVGFQNSLFGLKNSYFLVANNMLWM AASLINNSILLIKLARLKSSFCHNGRSKKSYKAEVSLTFTTFSMIFSYVSSSLVVISY QLGGDSTYYVIMFRPFGNDLDMCICPWVFYLTHPIFRRKTNNVIHVNQNEKLQS" CDS join(144321..144539,144585..144995,145043..145252, 145297..145461) /gene="CBG26387" /locus_tag="CBG_26387" /standard_name="CBG26387" /product="Protein CBG26387" /note="contains similarity to Pfam domains PF10322 (Serpentine type 7TM GPCR chemoreceptor Sru) , PF02118 (Srg family chemoreceptor) contains similarity to Interpro domains IPR003839 (7TM GPCR, serpentine receptor class u (Sru)), IPR000609 (7TM GPCR, serpentine receptor class g (Srg))" /note="Predicted" /db_xref="GOA:B6IFE6" /db_xref="InterPro:IPR003839" /db_xref="UniProtKB/TrEMBL:B6IFE6" /protein_id="CAR98626.1" /translation="MESSAVGIHGNATFTNFEFSFFTLPMYLLFVPIIYIPITVVIIL RTLVKLYFAIQDRNENIQLFTVISMSSFMSLIIFISDFFFIRLPTTGIFTSWCARMKP NRYLTAFFIFKYHINYSAMIFPCAVSTMRLILLLYPTRHKSVINHNQCFKISFLQLNG RLLRFLLPFLLFYPFLLTFFMFPALGYCSSAKHPFPFGAIIFRIENTLFGLANSRLLL FITGFWMTASMINNWILLVKLIKARCSLSARVRSQFSYKEERSLTLMTFSMIFFFLSN GIFLISRFFFPDYLYYAIMFRPFGNDLVTCVVPWVFYLTHPVFRKKIVRQIFIFRPGA " CDS join(146387..146608,146693..146902,146950..147108, 147153..147350,147394..147570) /gene="CBG03348" /locus_tag="CBG_03348" /standard_name="CBG03348" /product="Protein CBG03348" /note="contains similarity to Pfam domains PF10322 (Serpentine type 7TM GPCR chemoreceptor Sru) , PF02118 (Srg family chemoreceptor) contains similarity to Interpro domains IPR003839 (7TM GPCR, serpentine receptor class u (Sru)), IPR000609 (7TM GPCR, serpentine receptor class g (Srg))" /note="Predicted" /db_xref="GOA:A8WUU3" /db_xref="InterPro:IPR003839" /db_xref="UniProtKB/TrEMBL:A8WUU3" /protein_id="CAP24255.1" /translation="MNNVSIQGDLRYINYEFDWFTLPVLCASIPLIYLLPTIFVMIEI VRVYCRQLITKRDELMNPHVFFVIVLSQLMGFYYMVFDYFTIRLPSTGIMTSWCASQE PNHFLKVIFFFSIYFNYTSMLFPFLLSLLRLVPVYYPNKHKEICEKIVKFSTPCVFIY PFLFTFTLIPALGFCRQLLGPYQFGAIYIFFSGNWFNLKLANLLVLNVVFFLVLSTAA NILLYGKLKTIRNKRKSVKLQRAESSLTFTTLSMLSAYITNLIFVIMFIIHPPLSTYV VALRPFGNDCDTVLVPWIFYLTHPAFKKKLFSNEVSRVRTLHTTI" CDS join(147846..148079,148126..148335,148383..148541, 148590..148808,148877..149062) /gene="Cbr-sru-19" /locus_tag="CBG_03349" /standard_name="CBG03349" /product="Protein CBR-SRU-19" /note="C. briggsae CBR-SRU-19 protein; contains similarity to Pfam domains PF10322 (Serpentine type 7TM GPCR chemoreceptor Sru) , PF02118 (Srg family chemoreceptor) contains similarity to Interpro domains IPR003839 (7TM GPCR, serpentine receptor class u (Sru)), IPR000609 (7TM GPCR, serpentine receptor class g (Srg))" /note="Predicted" /db_xref="GOA:A8WUU4" /db_xref="InterPro:IPR003839" /db_xref="UniProtKB/TrEMBL:A8WUU4" /protein_id="CAP24256.1" /translation="MSNKELGIVVNLNSSYTDFQFNPYTITCFLAFAPFVYIIPTFII VFRIIRKFLRNVFRKKDPSFNRHVFIVLVLSQFSNIGFFLADLFVMRVPSTGMMTSWC YRQEPNEFLKILFISQSYFNYCAMLYPVLFSIIRLVITYLPNRHNDINTKILKYSIPL IHIWPLLFNLYLIPALGVCRQHFAPYKLGAVYVHIINSWRGMMGAPFTVLNSAVWLTV CLILNWILYRKLRELKSLSQSSSQTSQINKNRTIEISLSITTFAMLSAYIAHLIFLGA FLIDYDVATYLVVIRPFGFDLELCAAPWVFYLTHPAFRKRKDSKIVVAANKKTIKSVD Y" CDS join(149528..149761,149808..150017,150069..150227, 150951..151072,153087..153324,153813..154022, 154067..154225,154277..154474,154523..154708) /gene="CBG03351" /locus_tag="CBG_03351" /standard_name="CBG03351" /product="Protein CBG03351" /note="contains similarity to Pfam domains PF10322 (Serpentine type 7TM GPCR chemoreceptor Sru) (2), PF02118 (Srg family chemoreceptor) (2)contains similarity to Interpro domains IPR003839 (7TM GPCR, serpentine receptor class u (Sru)), IPR000609 (7TM GPCR, serpentine receptor class g (Srg))" /note="Predicted" /db_xref="GOA:A8WUU6" /db_xref="InterPro:IPR003839" /db_xref="UniProtKB/TrEMBL:A8WUU6" /protein_id="CAP24258.2" /translation="MLNEDVGVIINLNSNYSNYQFDFRTFPVLLSIFPFLYMIPTCFV TFRIIEVFIKKGVRKHDETINRNVFLVIILSQLTCLCYFFCDFVMIRLPSTGILTSWC QRNPPNLNLTIFFTSHMYFSYPLMIYPVLLAIVRYTPIHYPHKHHLLNTKILSFSIPI IHFYPFPFLFFMFPALGVCRQLKPPYPFGSAFIHFIESWHGIRNCMMKYKFKHILYQG TFLIDYQLGIYTSFLRPYGNDLETSSFMDMNNVSIQGNLFYINYEFNFFTFPVLVACI PLSYLIPTFFIIFKVFKVYIRQFLGKRDDTINPHVFLVIVASQITSIFYMISDYITIR LPFSGILTSWCASQEPNHLLKLLFFFSIYFTFISWLFPFLLSALRLIPVYFPRKHSEL CARITKFALPSIYFYPLIFTFTLIPAMGTCRQLLGPYQFGAIFIWFTGNWFDLKLING IVLNLAIWLILCSISNLMLYKKLKKLKSNRKSVILQRAEMSLTLTTFSMLLSFLTNLF CAMIFLILPSLTVYFIALRPFANDCEIVFAPWIFYLTHPIFKKKQQVACMKEVSRVGT LHTTY" CDS join(155268..155304,155354..156064,156107..156450) /gene="CBG03352" /locus_tag="CBG_03352" /standard_name="CBG03352" /product="Protein CBG03352" /note="contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase domain), IPR006186 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase)" /note="Predicted" /db_xref="GOA:A8WUU7" /db_xref="InterPro:IPR004843" /db_xref="InterPro:IPR006186" /db_xref="InterPro:IPR029052" /db_xref="UniProtKB/TrEMBL:A8WUU7" /protein_id="CAP24259.2" /translation="MSSENNSKSGSKEISKTEIPKMDLAKVDPKCAEWMDDCIKRLNT LYNNKDGANICNVMSGHEIIAIIRLVEHIFMDESNLCEAEAPIKVVGDIHAQFQDLNR LFDLIGRVPEEKLMFLGDYVDRGPQGIEVVMLLFCLKIRYRDRIYLLRGNHETPSVNK IYGFYVECQVKYGVGIWWDFQSCFNRMPMAGLISKKVLCMHGGLSPELVNLDTIRNIP RPCEPLDRGLLIDLLWSDPTNKGDGWFHSIRGISYMFGKGVVEQACKTMEIDLIIRAH QVVQDGYEMMTGRRLITVFSVPNYCAQFTNAAAVVCLNANLEISFQQMMPGPLPATAK AKAAPAIANDLNTDAAKADKEFIKAFIKV" CDS join(166847..167029,167192..167355,167421..167727, 167771..167985,168053..168097,168489..168777) /gene="CBG03354" /locus_tag="CBG_03354" /standard_name="CBG03354" /product="Protein CBG03354" /note="contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10328 (Serpentine type 7TM GPCR chemoreceptor Srx) , PF10320 (Serpentine type 7TM GPCR chemoreceptor Srsx) contains similarity to Interpro domains IPR019424 (7TM GPCR, serpentine receptor class sx (Srsx)), IPR019430 (7TM GPCR, serpentine receptor class x (Srx)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8WUU8" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8WUU8" /protein_id="CAP24260.2" /translation="MILLSLTLSVVNCFVVIGNLLVFYVILTKKSLQTSTNHLVLSLT ISDLLLGILILPFAIIQEHSNEWIFGHVGCRLWLSVDVFLSTASIYNLLAISFDRYMA VRQPIKYPIISSTKVVRLMTFLVWFCSLLLAVILFLLETLNAHDSIPSKECQPTTLPS MYIIFSAMASFIVPAFVMVILNVRIFQTVLHTSRTMTVKSKNGSLRVHRRKEPIVPVK KLERYETRLSQEDEGVGSPSKEVIDPIPVVAAVVEKHKNSVDAPAIRSFLTHTVVFGV LEAKKTNIINHITQWWRRSMVRSPNRTPRKKCMRRSIRTEMRVARTTGIVVAAFIVCW IPFTTIYVLQAYSFCTVAAGCIPTSLFTTAFWLGYSNSAVNPILYAAFSRDFRIALKR LFFQKPHF" CDS complement(join(168998..169075,169596..169846, 169896..170087,170205..170360,170541..170669, 170995..171106,171153..171343,171391..171514, 171563..171931,171976..172228,172275..172600, 174596..174756,174803..175090,175138..175625, 175673..175793,176009..176079,176130..176246, 176290..176513)) /gene="Cbr-lad-2" /locus_tag="CBG_03355" /standard_name="CBG03355" /product="Protein CBR-LAD-2" /note="C. briggsae CBR-LAD-2 protein; contains similarity to Pfam domains PF00047 (Immunoglobulin domain) , PF00041 (Fibronectin type III domain) (4), PF07679 (Immunoglobulin I-set domain) (3)contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR003961 (Fibronectin, type III), IPR013098 (Immunoglobulin I-set), IPR003599 (Immunoglobulin subtype), IPR013151 (Immunoglobulin)" /note="Predicted" /db_xref="GOA:A8WUU9" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR036116" /db_xref="InterPro:IPR036179" /db_xref="UniProtKB/TrEMBL:A8WUU9" /protein_id="CAP24261.2" /translation="MRLVICNFLLVAQVLAAQKSSIGKFFGERLKFKNSNLGPPKLRD QSEEEVWYHLDDDDLKNRLTLKCDADENTDRYSWLKDGEPFEINSDDVVWQKESQSGS IVFMKPHISHQGYYQCFASNIFGTALSNKMHLRLGSLEHFPKREIQILKIKEGESLTL NCTPPRGIPPPKIIWLYRSLDDSSVIETIRSRHITVDNNGRLHFSSVELSDGKPTLVY ECAATSPILRGEYRSGDRVQLDIEPSQDKSYPVKKLSVSPSEVTVRAGGQLKLQCVFG GRPLPTIFWSKVDGELPKSRIKDLTTHESDFGRSLIVENVHPDDAGVYECRGRHLVHT VNVRVMAAPFWEFEPPRDISLPEESTGELECLAGGQPTPIITWSMNGKFLHELAEDSR RVLLDHGRILRVRSLNHDLDTGVYQCNASNPLGYVFANAFVHVRAHAPFFRMPAARHW KVVLHSTVILDCDVDAAPEAIVRWVDADDRPLQVVEGKNKLFPNHTFMIYDVNSADEG LYYCNVSNKYGINRATNRLQVFSECFLRFYLPDYYFLEPTYFVRIPTPKRLILEAGET AEVFCEAVADPRLPIKYQWTINGKVLTESKYYEILPDRLRFRSVRGRHSGIIDCAAIT DVDVKLASMQLIVKDVPAHPVVEAAHCSERKATIKWVAASDHGDSIKKYIVEMFTDFK KNEWEVINEEVNVNKENFEVDITLTPWVNYTFRVVAVNSHGRSDMKIDGQSKEDWLTC QTRPSFPYTNPTGVKGEGTEPDNLVISWKPLDRYYWNAPNMQYLVRYKLDEPIHGWTE FLVEDSLANFTIIRDQPTFRKYLIQVQSVNSVGPSIVEPEIHHGWSGEDVPDEAPRDF RIDTQINFTTINFTWNPVHENIVNGHFVGYEIEYWKTENTVRKYSIKIPANSTYKIIN SFHAVTNYSAHIRTRNKRLRSAPSLPVSFAMPEGPPGKVHNLRVYSVGSTAILLQWDA PLQPNGRIRGYFISFQNDKNETEETYVIHRQKYYLHEKSEPDTGYKVTVWAETRAGEG PTTLRPVRTWPPRIPDAPTFRVKNISLDSFVVEWLPNNHSVWKMPGAAFFVNYTAESS NTWHQSEIIYLPNTEILLRNLKEDQKYFIQGIAKDGPRQCESVFLPIKTLNRDYANRL KEDSLRSAAWFIAVLGVLGIGLFTICLTFCCGNKNRQDKFAVRRKEIEIGHQQDNEEE KQFLEYQYGFKN" CDS complement(join(183480..183695,183741..183884, 183903..184382,184431..184632,185137..185548, 185562..185854,186115..186264,186988..187085, 187131..187282,187888..187906,187970..188173, 188245..188326,189223..189301,189701..189845, 189890..190069,190243..190391,191185..191234, 191284..191336,191385..191477,191495..191611, 191657..191697,192038..192179,192569..192722, 192768..192826)) /gene="CBG03357" /locus_tag="CBG_03357" /standard_name="CBG03357" /product="Protein CBG03357" /note="contains similarity to Interpro domain IPR023076 (Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site)" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WUV0" /protein_id="CAP24262.2" /translation="MDSNIVFSDVVHGDWTVHDNEVVISSEEVLPAVTKTEVISDAEK VSGEEQSHENDEVIDIESHSDLEDLDKEPTNNIHESMHPSSAPMPHDPNVYMSPQYFE SVVRQEPIPQQFLYYPGFAHGYSVSSTYHQPFVSMVRQKKTSALATVLGYSLRPPVPV SEIWLFLESLWTQHIAQSHIDYVPRYPFGYENQYSQQVDVNYNELINEEQDVKISCTI SKNPHENKSTRFENVEEKAASPSSSFPFTDCCRENVSCIPSRPIPSFGLSTEETSNDF STGASHGKSKEARQNHHIARVADYVDGGLLDGGISRHQTDEALGTDNGDTGAIEVESE DENDEIVVVDDEGDIGAAPTTAVSDKDDAEEAATSSGDTKHQKSPLEKLLLQPVKKRL YSAAITVGHPHQTGAHLNINNITSCTNCSLIPFSQTLVLCIHMRQTKTSIDTTIDLSR SYDQCDGNKAQAELFLYSQPLNSFTLHFLLFRSSIGPFPSFASSVHASFPSERLLPII MRVVKLTPGRQLMLKYPPFAVAFSAIGNPPLPSGQHPPSPKRMQFYQPPAQQHLARNT PPPGFAQPYGMGMRPHEEETRQIMNLDSQQTHNSSPTSSWQRMTEWVVEANAVVVTDG LGWTSDKRSTDGVVLYERTREEEKRMKPSPSTNQPYPMTNLNAYQQRGPNIYAAPVPP QMVHQNGPPGVVPTSNPYYPAPGPPPSHHHIQPQAPMMPPGMHGQQQQQQPYYNTQSP LTGPFLNHCTIYYWSSASMNYGSSQMPVPPPATNGSTPIFNFSKPRSSNEGSSANGGG HRRKKHNDLVGYHHIRISEFELLFQSSPRYNSNGSEDVDGSIFPDMSDFPLLDVVQSK AKKDAGRKPCRPHLCEQSRMLISRVCHFHREFVKRTVLEHTQKFSSRLPSRHPLANSP FSKPDQWTSQIMGISLATVRKCIDMAVDEEVFTRCTDKNLVNLTPSERAEREELLSKL STVFEDEKTLGAGTAGMTIAEYSPRRSYSNTLVRQSTDDKSSNSSFANGADYGSSETT LLNLDDHSNHSKDFASTPTAELNNGGQIYEELGSIGGGTQESEDKSTPAVETPKRGRP RKTPGMPAKSSSKQHQSQEDSEMSEDVSPNKPCALKKEEHEKKTEDEDETTEESEKKS EETEQLVLAAERDDDAASSEGTNRSETATPEPAADTSVAKKTRAAARRKNTRTIEEEL PAAAKKKRGSVTAATAGVPGLDDENSDHKMVTR" CDS complement(join(193179..193362,193409..193775, 193825..193975)) /gene="Cbr-clec-87" /locus_tag="CBG_03358" /standard_name="CBG03358" /product="Protein CBR-CLEC-87" /note="C. briggsae CBR-CLEC-87 protein; contains similarity to Interpro domain IPR001304 (C-type lectin)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WUV1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/Swiss-Prot:A8WUV1" /protein_id="CAP24263.1" /translation="MRFFRFLVFPVIAGLSSVLAAPITSNDTVDGSGEAPETLLQNSE EQPHQRLKFYNWDYKDLGTTAFEDISFPARQPPVAVNQSEQCPDGWLRFADSCYWIET ELMGFAKAERKCFEKQSTLFVANSLEEWDSIRSHSKEAYFSWIGLVRFTHYEKSEQLP RWQTEGAINPTKMNWLIKPYKPIVNGWTSFANCAASYKSPATLESASYTFFYPCTYLL YSICERNSTIVNVMQ" assembly_gap 194507..194516 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(194736..194828,194873..195004, 196214..196240)) /gene="CBG03359" /locus_tag="CBG_03359" /standard_name="CBG03359" /product="Protein CBG03359" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WUV2" /protein_id="CAP24264.1" /translation="MATRNSAPATTVSCEEPTQGTDADETDLTLTPSGNFLTATCISE VTGISPFVVYNEVTTTLASIMMVCLNNGYQYTTATGDVM" CDS join(196725..196835,197549..197626,197671..198006) /gene="CBG03360" /locus_tag="CBG_03360" /standard_name="CBG03360" /product="Protein CBG03360" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WUV3" /protein_id="CAP24265.1" /translation="MINETSSKRQHLVHHGMPPDEKIQNTSYCEDSYDPYEMEARMRA QIERNNEWIEKMSPVVKYKIQEYIRKQRAKKMQRRKFSLACGLNHRMRNDPHQMSSSS TSSSSSRRRSKKHVESPYSNNRQMASSSSAPMLERNLSQPDMPDSRKSASVSNRRKSA PAQKMDMRDLDDLE" CDS join(202417..202479,202529..202621,202669..203007) /gene="Cbr-lin-22" /locus_tag="CBG_03361" /standard_name="CBG03361" /product="Protein CBR-LIN-22" /note="C. briggsae CBR-LIN-22 protein; contains similarity to Pfam domain PF00010 Helix-loop-helix DNA-binding domain contains similarity to Interpro domain IPR011598 (Helix-loop-helix DNA-binding)" /note="Predicted" /db_xref="GOA:A8WUV4" /db_xref="InterPro:IPR011598" /db_xref="InterPro:IPR036638" /db_xref="UniProtKB/TrEMBL:A8WUV4" /protein_id="CAP24266.1" /translation="MSSFVISDTDAESDGGCRQQKKNKPLMEKKRRARINKSLSQLKQ ILIQDGHKNSAQHSKWEKADILEMTVEYLQQLRSSQNCLSSPSTSSVPTPTQPPTPPE EKIPCVHMSQMVPFMNPFMHQYAAYQQLAQLSIYSQLFGQQVGFKTMESKPISESLNT NQGK" CDS complement(join(204103..204342,204395..204524, 204573..204710,204758..204858,205415..206040, 206088..206320,206379..206521)) /gene="Cbr-ndnf-1" /locus_tag="CBG_03362" /standard_name="CBG03362" /product="Protein CBR-NDNF-1" /note="C. briggsae CBR-NDNF-1 protein; contains similarity to Pfam domain PF10179 Uncharacterised conserved protein (DUF2369) contains similarity to Interpro domain IPR019326 (Protein of unknown function DUF2369)" /note="Predicted" /db_xref="InterPro:IPR019326" /db_xref="InterPro:IPR036116" /db_xref="UniProtKB/TrEMBL:A8WUV5" /protein_id="CAP24267.1" /translation="MMLKLFLLFICCLITLCKSFHITPISYTLLAENIESVVNLAGKV QEKRFFLQISNEASPFFMYVTPCGAPIHWQLFSVDKDMSLSEELDVVSSISTPLEESE KFRLIAGEEDKKRMTFFAHRVPKKVILVVRASSPSASARIFFSPSLFRLEEQYPPLPH DTRLATNVLDDISKKDEVSAQITWKISPQVRNAEPGRYRICTIVSRQDPEFAGMCDDV EEGVEAVKCVPQMNNSVVMGQLWRDRTYYVTVFVRDQKRGSSSAYEVQTIQTPPSPVN EMVSRRKVPRNIPRKQKKNAPIILTDGIMGQVELEPRKASVLNMKFFVHPLPSNQSQT AYLIVHACDGLIRLNLFRNGKLLKRSESFSGFKRFVVSNFKAGHLRYQIINDDDAKKT IRVWTSTNAAQSPYPNLPDDTSVKVVNRKCDSATIQWMRGQDEHLKYCVYQRKENSNF LEHLVSLADNLCQGGLSSSTLVGCYVHSPTSAEIETQSVLETIIGNLQPSSTYRLDLL AIPMNRPHPQALPYRTVWVRTNPYCAQE" CDS complement(join(209463..209565,209613..210659, 210709..212348,212396..212655,212679..213975, 214025..214424,214484..216775,216854..217899, 217938..219485,219556..221064,221111..221878, 221948..222379,222425..222649)) /gene="Cbr-eel-1" /locus_tag="CBG_03363" /standard_name="CBG03363" /product="Protein CBR-EEL-1" /note="C. briggsae CBR-EEL-1 protein; contains similarity to Pfam domains PF06012 (Domain of Unknown Function (DUF908)) , PF00627 (UBA/TS-N domain) , PF06025 (Domain of Unknown Function (DUF913)) contains similarity to Interpro domains IPR010314 (E3 ubiquitin ligase, domain of unknown function DUF913), IPR010309 (E3 ubiquitin ligase, domain of unknown function DUF908), IPR000569 (HECT), IPR006032 (Ribosomal protein S12/S23), IPR000449 (Ubiquitin-associated/translation elongation factor EF1B, N-terminal)" /note="Predicted" /db_xref="GOA:A8WUV6" /db_xref="InterPro:IPR000569" /db_xref="InterPro:IPR009060" /db_xref="InterPro:IPR010309" /db_xref="InterPro:IPR010314" /db_xref="InterPro:IPR015940" /db_xref="InterPro:IPR025527" /db_xref="InterPro:IPR035983" /db_xref="InterPro:IPR037197" /db_xref="InterPro:IPR041969" /db_xref="UniProtKB/TrEMBL:A8WUV6" /protein_id="CAP24268.2" /translation="MRIDDEPSSSSNSTEMPPASATLLQKINDTFTDEDFIDAINKGR EVHAVMGKTELHRWIDVLNRCDEILEKAVQKLGKLFFQNDQGNMKCDHDATLKNYAVA IIRFTVLLFECTSSRRIYKSVDRILALLESTDMDLLAEVLRLLQVMGKRSKFLSTRIP QKDQQSMANRLTAIAQCWGGKLRTVKMAECLKKDPKLPLLFPFSYTDSKQRTIVVEQP QNEETVGELITRTVAQLSPPTNSETTTTAHFSNDDLYCLLSRIRMHIAFNDWHHRFKC LIVRLLSVSTLVYCRLGGTDESTLSSLLYSGFIEEIVELLKTEREADTQTNHHLHDAI QTEALSTLCSIVTYEKEPKVPQILDALSASSYHGFLSVMTRQIVDELKSNNLGKPGKP SVSLATALFSFIYHLASIEPGGDTLVSSGLTQTLLSVIGYHDLPIECITFGTRCARII DLFTTLDVTAFKANNGMEICVNRVVHEINECRKEQPFMIDVSHDMPFDAEPEPRDDQE QDEQNEEDQRNMEEDGVETSATSSNAPLQEMEESGPAPDVVDSPNQAGSSTEKFKGGP WEVVQSTGTTCHQQRSGLIKGLLTFIKRAIGDGQFQDIMKHIMEGDLPEALMHILSNA EYYSPSLFHQSAHLITNFVYQFPEELSSIQRRHVPYVVFQSLLRKEVRLTPVNKKYTL LPLNVFIFQLPNSKDVITTLGNVFTAMCLNERGLRQFKSYEPFNQIFRIVLSVKFLVT LRKKRTSDVFESAQAIGGALDDLMRHYPDLKHDMLKSIIVILDLLHEIGKNPPNGVEL VPTLTKSMARNIVFSPNMSFLVPREARSQANQQREEPEQADEQVGGDVDEEPMEVEDG EDSDVDEEDNEMSMDETTGDPPEPAAPSPAPQKNRPFEYGPGMMCEDVYGKKMLPIGD YMLLIARVVETMMTQTPTQKITEEFIEGRVMQKIMRLCHLPCPASDATQTAYLNSISA IIKHIVKAGFHGQRTGPDAGPKLMSAIIEEFIKTIDPFFEMYDKHCSVLQKDGSKNAS LFMTLDDKILEKTLLELNSIIPALLHLNKTPMNSSNYNPPDHRNRIFETWKMPDGMKL YAMLRKLSRMLCWEHELIQTLKPTIRTAATQTEGEMLSDGPNDAHLDMEVLPPWEEDD IKEKRQQEQDKDHRWKAAGVSQAEHEFWSHHKSLQETVCKSHNAVKELLNSMGRQANV NNPRRIRTREAPTLPAASTQCISMIFTSIYKDIKWEPPVQSLENSPMAYGRYTDLLAQ LNYALFEGGNRCASASLAQNLYTSGCHKAFFELFTEKIVPYLGENMPEGVENAMEEWC RLAGKLTDRNALVNPDGIQQRRDRQITDFDTVKYLKLVCRDMFHAYKQFFEKMAQMPD WELKSLKKVCESAFSVFKEVAKNLVEEAENSPAPAAAGNANAPDAPPEEWAPGVPRPA QPPADAPPAPQAPDAQDETIRMLMDLGFSRDIVLYALENTRNADEAANYLLAQGQEVS IRIQDVVNAFRDDNDDDDGIQFALRAMRPIVPTASPSANELENELRDSLANRQGYELV RTAQRTLRDANMDQVADQLVEIYPDESAAINADSLITTVMDRVRNPRSTYEENIATPL IPPLSQLKIEQDVSLSSACEQLFPLVKRLLVVSNDTIHPCAELIVSIFPAMTENWRKE HLIAEICGQDLLNMAESFINQELDDSGKPKDHEIARTMANRLHFAVLIFENVSEEYVQ WIDSKGMTQAMIKMLEYLVERFKVVDYYQSLVTRVVCWFDFYAKTHRLVLRRKYLQSL TPTLEWFYQAYEEDGMRRRHEYAPGDRKWVPYDASTQKLLNDAFFSGARGIKCLVKRG TRPSKRMDVDFTTMKQTDSTIREIIRTDIPSNVTVSIPDLMASEARLTWPEEENDKLL ELSVKILKAGALDPKCSHSMLSFISRLTKHKRNAEKFVDLNGVVSIFRLRARCASTYP YLVSVIIRNCIDDETLLTHVYEKTIRSYIAAPNHPPISMSEYGIKPKEFVDTLNFMAP LSSRNPLVFTEAVNKLARLNGPDIVPIPKEKKPAASSSTATDAAASTSSAPPTTSASS HTVIENNDTAIVIVNMMVHEVLYGDFPTVGPTRMLPQEKILTILAEIIKSYPSLAIVV AECRDEQLSALYSLIDTYVSAPVDKLEVTNALKTLIAVISASQNSTKAQDLLVTDVKS ALISYSEDAYKVRQEQEKNKAEKESEEREDAAAELEKQEEEILQKISELCSIIIIMCQ SCPAPHHHHSDRHHRERLSQNAVMKLFHKKKICADLVRTIHCLQLSSKESLDAINQIL KTLDTLLEGSSASGPAGLSGARSFMEFLGARPVGRERRVLAAGDPIEREIESMINRDG FAFDGEMQSLLRRLQGDDWRAGPPRAGQPGGEDEEGSDIFERERSDSPSEASEHVGDE DVRDDAVETGDGEVEVEMVDIQEDAANPPGELVAVQMEIPQDDGEDDGEDEEDEEDDE DDDNQDAPEGEEDENDREEDDDEDEEDEEDDEGEEQEEAMRVVEPNPEPAGVRRLYDE EDDDDEEDADEDGDSMEDDVARLDLDDDYFDIGAPFDVHRMDDMIFPPSFGRPGVTAF ADIFRDEFDFLPPYRTDRRPIPRASHIGGVISEHPLMTRPPAESDVARRPNSALRAEI LSMHTRTTLHRQNAIRRTTNEAREIEAISRSVRMGEFPPGRVVIRGTNATGDGGAHAS FFDHIFEMRPANVAFTRNPSNFRTYNATDREDRRDVRASQVPTCLERLESYTLSMEPI STRFVTAIVNSYLWTFHTARETQIRKDAEAKAKAKKEADAAKKAAEEKKKAASQAQLA QAAPVAVPTPEDIGLATPAATNTTNTVSESQAPNASNRGEETSTTPAGTLPEAQQAQE PVVPEEPMETGDDDNAQDALPQSSAATAASSVAGTEEIEAVERQAVEEHVPPIQDHDI PPVRLVEERVPGRHMMDEEFRAILGDIDIPDGVDPAFLVALPEDMRQEVIRDFQRQQR AERASRPVPAAQPVVANAAEPAAEAAEAPAADRAPLIEPIDPVFLNALPPELQEEVLA EHERRVREAEDQLRRQNAPPAQPVEMDGAAVIASLPANERAQVLAEMDEAELAGLPVE MQNEARRARAQHIEPNMLRYHRLLFRGGAGGGPAQVGLARTRTTTRPGKSLHNVSAQS GPTIGQNAGNGYQAPTDHPHLLDKESILTLCLLYLVDNNRVPHTRLQKVLRSACVNQT TCDFIVWCLLALLDKASDSNMDDEEMISNVPAWLDSIAVSGVGHNEKAIRISENAQKV SIHSMLAIPMCKNILDLLTNIARSYPGNFLPAILRHGAKPTDVPKQAPSFQQFWNMVQ TQSSKFPRSKDWTTAPEQQLEECPLGQMLSSLQKPTMAKSPLKEKVLKVASQIMVTLP MDTLKLLGNDESRKPFAEKLEFVIRVMTTGSCSAEGLSDGLTILSEAMRSFSDSTSTD IYEHLFSAVTKLGSELLPQIDRLILELDDAQKPENASVGGSDQTSTSSKTAQLVVDTN AGGRTAAGRFDGERVVIDGDQNMRLQMSSCKELQLPAVTVLTDKGGSQYAILSALQTL VKVRSHMKAIKKDKTKRAKEAEKKQKEKGKETPTNSSVPQPTDTATSASSAASNQPAQ EPESEDVVDEEPRISERLHSLENLWNSLSDCLLRLGKASDPHAVLALQPAAEAFFLVH ASQQQKPKSKDSEAKRKESQAAPSTSAAAAVASSVSHDGLREDLDPDTAKLIEFAEKH RQVLNQALRQNNAVLSAGGPFAVLTQFPKLLDFDVKRKYFRKELTKMEPSMPRYRRND VSVQVSRNRVFSDSFRELFRLRPSDWKNRFYIIFQGEEGQDAGGLLREWFSVITREIF NPNYALFITAPGDMVTYMINKASYINPEHLDYFKFVGRLIAKSVFEHKYLDCYFTRAF YKHILNLPVRYQDLESEDPAFFKSLDFLLQNSIDDLDLDLTFSTEVEEFGVRSVRDLK PNGRKIEVNDANKDEYVKLVCQMKMTGSIRKQLDAFLTGFYEIIPKDLISMFNEQELE LLISGLPTVDIDDMAANTDYKGFQKTSTHIQWFWRALRSFEKEDKAKFLQFVTGTSKV SEFTFFTEKIMIEFQVPLQGFASLEGMNGVQKLSIHLDSRGGDRLPAAHTCFNQLDLP QYDSYEKLRQSLLLAIRECTEGFGFA" CDS complement(join(223711..223856,224072..224402)) /gene="CBG03364" /locus_tag="CBG_03364" /standard_name="CBG03364" /product="Protein CBG03364" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WUV7" /protein_id="CAP24269.1" /translation="MRSYCYLSLIFLLINYVSAVPGTANYVAPSNSTRVLRQSENPKN LEDVLAERPEESEDVGPLGEVQLDVEEEDIGDSAQPKMRVRRGYNTAQQQKPQQQQKS KYGGGGQSNSKYGGSSSSRGSKYGGARQQPQQQHSQYGQQSTPGKYGAEQQSRGGY" CDS complement(join(224725..224871,225705..225770)) /gene="Cbr-cpg-9" /locus_tag="CBG_03365" /standard_name="CBG03365" /product="Protein CBR-CPG-9" /note="C. briggsae CBR-CPG-9 protein ;" /note="Predicted" /db_xref="UniProtKB/Swiss-Prot:A8WUV8" /protein_id="CAP24270.1" /translation="MNFWHLLLLAVLFFVTVFGADLEGSGSGDVVEDASEQAILKAQN LLNSVPSEESGAEVEASGEDVQTFFF" CDS complement(join(226144..226406,226673..226864, 227073..227233,227378..227433)) /gene="CBG26388" /locus_tag="CBG_26388" /standard_name="CBG26388" /product="Protein CBG26388" /note="Predicted" /db_xref="GOA:B6IFE7" /db_xref="InterPro:IPR026748" /db_xref="UniProtKB/TrEMBL:B6IFE7" /protein_id="CAR98627.1" /translation="MDKTHKLAVFISMCAFIFSIFFTIISGCSEYWARAEVIDTRKFR HAGAVHSGIFAGNREIDFGQGAVNTRFTVFNELQDGTSFFSRTVWIFFLFFESMSLIW SMIGVVTCVFSMTSLALDISVAGPNGIYLWSLLSSVSHGGALALFYSQFQSSFKTTML LEEQHDIGFTTFNQASLSYAFYMSLCALFALYIPPLTLVVFTEKFIHSRSKTPTNFDP TLMLY" CDS complement(join(228401..228538,228585..228755, 228800..228955,229005..229115,229162..229942, 229989..230096,230145..230612,230660..230874, 230923..231062,231111..231684,231734..231901, 232883..233050,233159..233455)) /gene="CBG03367" /locus_tag="CBG_03367" /standard_name="CBG03367" /product="Protein CBG03367" /note="contains similarity to Pfam domain PF01433 Peptidase family M1 contains similarity to Interpro domains IPR014782 (Peptidase M1, membrane alanine aminopeptidase, N-terminal), IPR001930 (Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase)" /note="Predicted" /db_xref="GOA:A8WUV9" /db_xref="InterPro:IPR001930" /db_xref="InterPro:IPR014782" /db_xref="InterPro:IPR024571" /db_xref="InterPro:IPR034016" /db_xref="InterPro:IPR042097" /db_xref="UniProtKB/TrEMBL:A8WUV9" /protein_id="CAP24271.2" /translation="MNATFKSMVPVCEGEPCIRNGSGAGATVRFRQGKALFIGGFQVE KDTEVTESRRRKSDFARKCIAVILLHAIFLFAILAALIIGHWISEENQKLNNRTMLNF TLAEAYLLEGSYTTTTATPEALNHHHTRLLTTSSAMGPLRKNAPPRVVERLIPLEKKR NFTILDVFPPPADGGFGIAEQLHAVRSNKLSTDALLVPLPLYILPYHYDLQLDFSQFD TNLFIRANISIHLESYGNSTEDEIQFHLGPNIKIERMRLKKDGKKFYAKTFKREESKK LGRISLRDPLQKGKYILEMAYNMTICDEDVDGVRCSLDNQTNSSLKSTSFTTKFEPTL ARAFFPCWDEPGVKATFNISVKHNKKYTVLSNMSPIEQPNKVDWDDQFKTTVFQPTPP MSTYLLAFAIGEFVKLETRTERGIPVTVWTYPEDVMSMKFTLEYAPVIFDRLEDALEL FQIPYPLPKVDLIAARNFHVGGMENWGLIVFEFASIAYTPPITDHVNETVDRMYNEFR IGKLIAHEAAHQWFGNLVTMRDWSELFLNEGFATFYVYEMMSSERPVTAQFEYYDSLA ALVSAQSEEDHRLSLVRELATESQVELSFHPTNLYTKGCVLIRMLRDLVSDFDFKAAV RRYLRKNAYRSVSRDDLFSSLPAYADHGADKEKLNYVLEGWFVNEGLPEVTLIRNYDN EMMTISQRKTVHHEYRSFLKDRKPAAGVRYRASRSAEDGSTLFDDTLFEGYTERRKDK RRKHRPARRKASTPPPISPIMRRDELRKPRRVGASQDLWTIPITYMFGSLKTSEGQVI REFWLKNRTVSFGDAEISPNQAVLVNPEWKYPYRVNYDLLNWKLLARTLHQNHLEIND KSRMQLILDAEYFLSNSVNPHLYLYLLGYLAHETKMEVMLFGIDAVYRFIDVFKATQL NKAILVYFEPVISQMDHLLNESQVDAETASLWLVRPERLAKLYQMRCAAGLHSCKNEY YTQKWSRSPDEWTEDVHKQVTAVCHQLFTNTPEEVKTVQELLDSRLSSSGAKWALTVQ LAACSHNQKLLRKTARAIVSTKNAAVYASALQSDFSLHYNPTFRKYLWSEISKMSTFE KTALFSTNSTNILPASRILLHSVKTIDELQQIRGLLTNWGPLLTLHFEYLERYLLWVS SVSQGVLHQFFAADLSNF" assembly_gap 241869..246824 /estimated_length=4956 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(247678..247707,247752..247835,247882..247967, 248011..248070,248116..248182) /gene="CBG03370" /locus_tag="CBG_03370" /standard_name="CBG03370" /product="Protein CBG03370" /note="Predicted" /db_xref="InterPro:IPR009564" /db_xref="UniProtKB/TrEMBL:A8WUW0" /protein_id="CAP24272.1" /translation="MLSIAFLLERIVLFGSSFLFLFPLINCSSKKKFETDGKADLVPK SVTPPVSSPVNDESSKQAPPTSQTPPARTPVEKTGSVQEDTLANVKSLPPEKSEAPDS KKKKKK" CDS complement(join(248982..249028,249498..249624, 250767..250835,254125..254292,254340..255083, 255086..256398,256448..256573,256958..257008, 257837..257945,258074..258465,258518..258599, 259103..259301,259385..259437)) /gene="Cbr-mca-3" /locus_tag="CBG_03371" /standard_name="CBG03371" /product="Protein CBR-MCA-3" /note="C. briggsae CBR-MCA-3 protein; contains similarity to Pfam domains PF12710 (haloacid dehalogenase-like hydrolase) , PF00690 (Cation transporter/ATPase, N-terminus) , PF00689 (Cation transporting ATPase, C-terminus) , PF12424 (Plasma membrane calcium transporter ATPase C terminal) (2), PF00122 (E1-E2 ATPase) , PF00702 (haloacid dehalogenase-like hydrolase) contains similarity to Interpro domains IPR008250 (ATPase, P-type, ATPase-associated domain), IPR006408 (ATPase, P-type, calcium-transporting, PMCA-type), IPR004014 (ATPase, P-type cation-transporter, N-terminal), IPR022141 (Plasma membrane calcium transporter ATPase C-terminal), IPR001757 (ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter), IPR018303 (ATPase, P-type phosphorylation site), IPR006068 (ATPase, P-type cation-transporter, C-terminal), IPR005834 (Haloacid dehalogenase-like hydrolase)" /note="Predicted" /db_xref="GOA:A8WUW1" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR004014" /db_xref="InterPro:IPR006068" /db_xref="InterPro:IPR006408" /db_xref="InterPro:IPR008250" /db_xref="InterPro:IPR018303" /db_xref="InterPro:IPR022141" /db_xref="InterPro:IPR023214" /db_xref="InterPro:IPR023298" /db_xref="InterPro:IPR023299" /db_xref="InterPro:IPR036412" /db_xref="UniProtKB/TrEMBL:A8WUW1" /protein_id="CAP24273.1" /translation="MPDYGASLEELRALMEYRSAEAKEKIDTDYGGTAGLCERLKTDP NNGLPNNEAELEKRRNVFGANEIPPHPPKCFLQLVWEALQDVTLVILLVSAIVSLALS FYRPPGEDTAGSDDSEHDAGWIEGVAILISVIVVVLVTALNDYTKERQFRGLQAKIET EHRFFVLRGGQSIQVVVNELVVGDIAQIKYGDLIPSDGVLIQSNDLKMDESSLTGESD QIRKSPEHDPIILSGTHVMEGSGKMLVTAVGVNSQTGIIMTLLGAAKTVAEEERKTAK REGGDGASGAEEGTAQALLDSKGEDGMANGKAVAAAEADGKKERSVLQAKLTRLAIQI GYAGSFVAGCTVLILIIRFCISTYAINGKSFSLADFQHFINFLIIGVTVLVVAVPEGL PLAVTLSLAYSVKKMMLDNNLVRHLDACETMGNATSICSDKTGTLTTNRMTVVQSYIN EVHHKDTPKIETLDQNTAKLMMDCISINSSYSSQVIPPKQLGEQATQLGNKTECGMLG FVLALGKSYQEIRDRHPEETIPKVYTFNSVRKSMSTVVNLPDGGYRVFSKGASEIVTK RCKYFLGKNGSLTKFSSKDAENLVRDVIEPMASDGLRTICVAYKDYVPAAKKTSDNQI AYSSEPDWENEESIVGDMTAIAILGIQDPVRPEVPAAITRCQEAGITVRMVTGDNINT ARSIATACGILKPGEDFIALEGKEFNARIRDENGEVSQEKLDLIWPKLRVLARAQPSD KYTLVKGIIDSRVTDSREVVAVTGDGTNDGPALKKDVGFAMGIAGTDVAKEASDIILT DDNFTSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVVVAFVGACAIQDTPLKAVQMLW VNLIMDTLASLALATEMPTEELLKRKPYGRTSPLISRTMSKNILGHAVYQLVVLFTLI FYGEVCFSIPSGRWAPLHSPPSKHFTIVFNTFVMMTLFNEINARKIHGERNIFKGLFS NPIYYVIWIATMISQVVIVQFGGRWFSTSALNTTEWLWCLAFGVGTLLWGQIVTSIPT GSLPANMTIGSGEAPTNDPLMPDYEDSDTHEKRSGQILWVRGLTRLQTQVIGGERSDH LIPVPLSSAPTDQAIRVVKAFQAGLDRREPSLTGQSAARLREISRQLRLQVDSENRAR STSRGNIKETNNL" CDS complement(join(264060..264078,264183..264556)) /gene="CBG26389" /locus_tag="CBG_26389" /standard_name="CBG26389" /product="Protein CBG26389" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IFE8" /protein_id="CAR98628.1" /translation="MDPNSSTPFSSPSILLCSSASWRKSSHTSIYISISRRPKFPSPV AVDPEHHDKNELYMYVFRLSWATWVTHAPTEKRAEPRVMNFQKKEMRYALSSLPSLPE SQPEMLLICDCCIMVLVRTFQNEKLCYR" assembly_gap 265784..265837 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(267428..267733) /gene="CBG26390" /locus_tag="CBG_26390" /standard_name="CBG26390" /product="Protein CBG26390" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IFE9" /protein_id="CAR98629.1" /translation="MCRIGLEPHWYWQKWRGQTNRFFLSLFLDTVHLHFNFVSVLLPP FLSLSLHPHTETDPICAKFNTLASLKSYENFQNFAYLVMFCAFRDQRTYKNSTVLLC" CDS complement(join(271051..271182,271228..271300, 271343..271468,271498..271680,271724..271849, 271896..272122,272172..272684,272726..272807, 273017..273107,273154..273220)) /gene="CBG03373" /locus_tag="CBG_03373" /standard_name="CBG03373" /product="Protein CBG03373" /note="contains similarity to Pfam domain PF02995 Protein of unknown function (DUF229) contains similarity to Interpro domain IPR004245 (Protein of unknown function DUF229)" /note="Predicted" /db_xref="GOA:A8WUW2" /db_xref="InterPro:IPR004245" /db_xref="UniProtKB/TrEMBL:A8WUW2" /protein_id="CAP24274.2" /translation="MRNHDLAIGFNEEPFDNFRHFNDILKVEEENSCQPYVIGSRQFD LLELTAPMICVYTEIIKREELLNGTILVDASKNETNIEPGIPTRIDFEQFVVFCRDPS GYHFYNKTWFNFQPKLEKLEFRKSQKTDGLMVLIVTGMSHNQAMRHLKRTFSFASKHN FLSFSMFNQVRGFQEVLEMRTTKFQRSIDNWENSMKLFRTWRKPRCVTFLHSDSDRIS KHFGDKFDFHSQLYNNFNRKYLGHVDNCITDGRVTVEDAVSLWVNSTKAFHNKKFCHF SLLHLDDIASPLDGTLVNLDEVLRDSFQDLFDEGILANTTIIVLSGGSKNSTVYKTES GKIESKYGLFLIRPSDRLRTKFPGKISSLSKNVDRLITDDDISETLLDLMTNFEHSEF QRSLFETELSSNRNCEDAGIFEDFCICSKRVELGKKTHLWFFRKEVMKSLLKLIRKEF SMFKCISKIQIDTRNWNVRKFGHYFFQFHGNLTTERIKESGRFSNSTVLKFHGTARFS TLAMVDLELKDRLKMEKLETKEKYLDQPFHL" CDS complement(join(274856..274881,275537..275744, 276338..276341,276636..277256,277738..278111)) /gene="CBG03374" /locus_tag="CBG_03374" /standard_name="CBG03374" /product="Protein CBG03374" /note="contains similarity to Pfam domain PF00098 Zinc knuckle contains similarity to Interpro domain IPR001878 (Zinc finger, CCHC-type)" /note="Predicted" /db_xref="GOA:A8WUW4" /db_xref="InterPro:IPR001878" /db_xref="UniProtKB/TrEMBL:A8WUW4" /protein_id="CAP24275.2" /translation="MAGKSSGTLRRAIGLAKSFLVEKLEDQKKDSKEDVTKFDEEELV EFLKQTHQDHEQIRIQVEKIQGYEDEWDQMILRDPREVEVKANYITKYGSYMAQVEAG HKQMQDMEAKYREAWDRLNAKDEKLPDITNSTSPAALQEFYINAQMIFNELMSLGCEM DNLSTADAIESKLPFRVVRKAYTQGCRDTPYKASELLEMVGKISRSESLLAAIKPTNE QRTTTMAVQNRHGQGKNSMNNRQKEKVKKPCKYCVEERMMHHPMDCRKYATNEERKVR AGQLQLCFKCLEAGHVARDCSWKCKECQGKHHFTMCHKREQQGQGRQQHPRNAGHSLS KMNFSINRFFELFSHSNKRANILLTFEKCKSFLQHPRKKRKKKKMDNEGIEPQTCDSY SSPHRSWARILAEVKNKY" assembly_gap 277402..277657 /estimated_length=256 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(279893..280200,280254..280439, 280574..280814)) /gene="CBG03375" /locus_tag="CBG_03375" /standard_name="CBG03375" /product="Protein CBG03375" /note="contains similarity to Pfam domain PF06881 RNA polymerase II transcription factor SIII (Elongin) subunit A contains similarity to Interpro domain IPR010684 (RNA polymerase II transcription factor SIII, subunit A)" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WUW5" /protein_id="CAP24276.1" /translation="MGTSSEEIEKCVKHLESGQHIHRSLNRLLRLDASLSQFTSYGVK HLAIRYSKNSEYKTVSNDLLSKIQKLEDDSVFRKPYNTSHPSHQNRRRNASTSLSSSK SHSKLPKICTPEDDLPSLEPSSKSSSESCVVTQKNVIEVTKLKNLEESDYDRVRPTLV TLSAKQLKSFMDQNPRIELIGDGLFRRHCQMDCPEEVPKKLITETWRTLHDVFINWKL YQEAKVWEKKINEGLENYVKMKTDTQ" CDS complement(join(280978..281053,281099..281227, 281275..282057,282105..282245,282289..282429, 282677..282834,282885..283077,283126..283214, 283951..284037)) /gene="CBG03376" /locus_tag="CBG_03376" /standard_name="CBG03376" /product="Protein CBG03376" /note="Predicted" /db_xref="GOA:A8WUW6" /db_xref="InterPro:IPR012337" /db_xref="InterPro:IPR040129" /db_xref="UniProtKB/TrEMBL:A8WUW6" /protein_id="CAP24277.2" /translation="MEERKPEKYYKTEDNDPIEYEEVFQNSTLVKKYHFYVTMSLFVY LFSFSFFLFFHLFLTYEQNAYSSVERYNEELAMRFFLGNGRSLETINDPPFLKFLHHL NPTRNPPEPSYMTTRAMTETRPDIKYLRNLGPLGITIEAVRKADEIYLSISSHFYNSH GERQNTVHFEKIIFRDYDGRIVADRIRKVVDARKAMNYAVSYIMSPNCRMLEMITANM PVKNKFICVFSYLTMIANEVVKFPEFLAGLKVLREYVSALQKHREVFTKFKKMQKDAN DSADIPCLDVEGDWLSTLYFLASCSHLHETFSNIHENWCMPNYLDATEENSLANLLDF LLVLCRVTSEICSEDSCISQALYSISMVHNSIKKCGIKSARERMRKTFDKYYKSMTKD RSGDYLTVSSLLDPRYAYSTLIFNEENWNLIEKKLIKLFEPSQLQQQGVKNELKDYRQ LHENLPVFDEVTTPTTWWNDHRDQLPLMHRQWIEHSALPAVAIDGKRFFAKGGKLAHL FATLDEELHYKAMLLAQSSQDFIGRGSMSSSVLNQITEGCKFKRLDHEPDSLEEETTE PVAEVKLEPTDETSENSKLVETELKQEEPNDF" CDS complement(join(287117..287137,287279..287418, 287711..287786)) /gene="CBG03377" /locus_tag="CBG_03377" /standard_name="CBG03377" /product="Protein CBG03377" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WUW7" /protein_id="CAP24278.2" /translation="MLKSTLFSVLLMLLLACSFGNVSGNEFFLRSAKWVSKMNPSGGT LVSGRGGFRPGFVSRDWRHAMAEPNFVKRSYYDY" CDS complement(join(292348..292467,292646..292842, 292890..293011,293060..293334,293379..293591, 293635..293720,294131..294194)) /gene="CBG03378" /locus_tag="CBG_03378" /standard_name="CBG03378" /product="Protein CBG03378" /note="contains similarity to Pfam domain PF00104 Ligand-binding domain of nuclear hormone receptor contains similarity to Interpro domain IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /note="Predicted" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR035500" /db_xref="UniProtKB/TrEMBL:A8WUW8" /protein_id="CAP24279.1" /translation="MFDEFVSAMKEQKKDKKPETKSKLKQITDGKMTSFANHSFKVSQ GNSYRFPSNQFGYSLSTFSPFFLQNCCDVIRRFLRLEAYCDAVDDLSGPLPKSMSGSA ELDLFQALFFPRSIAPRTPMKPAAATQMAEQTLSAMWFRLVAHYFEWLAGISELQYLG DEDKLRLAVCQLCKVVCFSVVYANYNRALDGDEELLHFGSGFYWDPARGNDPLMDDYC QEMKRIINHIIEPVKKVGMSKEEFVLVKLIVLFDCTNLMGLSPAGLEFTRSMCNKYRV TLMEYVGMKMEEMADSKGWSEGEVKNRTMERMRNLLDLPIGVEKLGKLDDDSLAAMVE SNYGGMRGTLQQQIHTESRKVRHH" CDS join(298250..298592,299223..299329) /gene="CBG03379" /locus_tag="CBG_03379" /standard_name="CBG03379" /product="Protein CBG03379" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WUW9" /protein_id="CAP24280.2" /translation="MFLNHRPVLVFLLFLAASPVDVVSRVLYSDSIYQDGYPVNETLR LDPLQLDLNPLHLLCPVCSIMQDVLGLVTGLVLGGGLLKHVGITVCSIGLSSTIKIPI LPNALCAAIFEVVKDDDVRNILRNFVAALQFHLDHRKEYLAITSLNV" CDS complement(join(299647..299835,299881..299980, 300034..301169,301221..301409,301447..301614, 302096..302242)) /gene="CBG03380" /locus_tag="CBG_03380" /standard_name="CBG03380" /product="Protein CBG03380" /note="contains similarity to Pfam domains PF02775 (Thiamine pyrophosphate enzyme, C-terminal TPP binding domain) , PF00205 (Thiamine pyrophosphate enzyme, central domain) , PF02776 (Thiamine pyrophosphate enzyme, N-terminal TPP binding domain) contains similarity to Interpro domains IPR012001 (Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain), IPR000399 (TPP-binding enzyme, conserved site), IPR012000 (Thiamine pyrophosphate enzyme, central domain), IPR011766 (Thiamine pyrophosphate enzyme, C-terminal TPP-binding)" /note="Predicted" /db_xref="GOA:A8WUX0" /db_xref="InterPro:IPR000399" /db_xref="InterPro:IPR011766" /db_xref="InterPro:IPR012000" /db_xref="InterPro:IPR012001" /db_xref="InterPro:IPR029035" /db_xref="InterPro:IPR029061" /db_xref="UniProtKB/TrEMBL:A8WUX0" /protein_id="CAP24281.2" /translation="MVLFLIILIVIIGLLLWKWLDIRSTDELTNALKLVSSGNGQHVL SNAFQVDEKSKRHGGELVASVLKAHDVEEIFVLCGGHISPILVAAEKLGIKIVDTRHE VIKVTAVFAADAVARLRQSIGVAAVTAGPGLTNTITAVKNAQMAESPLLLIGGAAPTL LKGRGALQDIDQMVLFRPLCKYVARVERLRDIVPTLRQAIKAAKSGCPGPVFVEFPVD VLYPYELVVKEIGFNPNAKGFIQKVLNFYLRCHVSRQFSSAWIQQDITPLPTSIPMPK SEQIEEIVQLVKSAKRPVLLIGSQATLPPVKPTDLVRAVEALGCPVFLGGMARGLLGK DHPLQMRQVRRDALKDADLTILAGTVCDFRLSYGRTLSKKSKIVALNRNYSQLTKNEK AFWNSNVSIQADVATSLVQVANALGSNHSKPSEWVKTLREKDNEKEAANAKKMEQKLT NGFLNPLNFLKTLDQSLPDDAILVADGGDFVGSAAYIVRPRGPLQWLDPGAFGTLGVG GGFALGAKTVYPKRPVYIIWGDGSCGYSLMEYDTFARHKLPVIGIVGNDACWTQIARE QVPMFQSSVAVDLARTRYDNVAKSLGSWGETIDEQNVDETRKVLDEALAVCRSGEQSA LVNVLIGKTDFREGSISV" CDS join(305641..305719,305773..306072,306121..306334, 306384..306546) /gene="Cbr-dmd-9" /locus_tag="CBG_03381" /standard_name="CBG03381" /product="Protein CBR-DMD-9" /note="C. briggsae CBR-DMD-9 protein; contains similarity to Pfam domain PF00751 DM DNA binding domain contains similarity to Interpro domain IPR001275 (DM DNA-binding)" /note="Predicted" /db_xref="GOA:A8WUX1" /db_xref="InterPro:IPR001275" /db_xref="InterPro:IPR026607" /db_xref="InterPro:IPR036407" /db_xref="UniProtKB/TrEMBL:A8WUX1" /protein_id="CAP24282.1" /translation="MQVIVPVEASTEIILVDVASSSQKKAMKRLTCRKCEGHGLYAIL KGHAGVCPYKDCNCGTCSSVMSMRANALIRRFRHRQPDQSTAVVKALRSKNGNMRLRI VARNEEETLVEPDGTLVTYTSDKNGHQTYTTTTRRSSILTTTTDDRDSVISTPPSTTN DSTPSGSPPLLSPYGEMDLTMEALGAAGVDVTSLFKQSLINQLLQNPTAVTPALITFL LQPSPQVFEPTTVAPPVLFPAFLNGLSAPSLSV" CDS complement(join(307935..308255,309418..309552, 309605..309705,310320..310529,311039..311207, 311258..311568,311616..311751,311795..311950, 311994..312167,312933..313121,316170..316319, 316366..316703,316753..316883,317827..318103, 318153..318471,318522..318621,318668..318803, 318859..319024)) /gene="CBG03382" /locus_tag="CBG_03382" /standard_name="CBG03382" /product="Protein CBG03382" /note="contains similarity to Pfam domain PF00723 Glycosyl hydrolases family 15 contains similarity to Interpro domains IPR008734 (Phosphorylase kinase alpha/beta subunit), IPR011613 (Glycoside hydrolase family 15)" /note="Predicted" /db_xref="GOA:A8WUX2" /db_xref="InterPro:IPR008734" /db_xref="InterPro:IPR008928" /db_xref="InterPro:IPR011613" /db_xref="InterPro:IPR012341" /db_xref="UniProtKB/TrEMBL:A8WUX2" /protein_id="CAP24283.2" /translation="MSSSVGGAALLKRRSAKPLTGNLRLRRLTKAYLEPLDDNKELSP TVVKIDQIYDLTQKLIVQCQSVTSGLFPRYSKDRDVGYVKDSIYCAIACWACSVAYKR LDDDRGRQTELRQTAVKTMRGILFCWMQQSSHLDSFKSQNSSEFALHARFDLSSGMCL VTPNDSHYGHLQMDLVALYLLTLVQMISAGVKVIYTHHEVNFIQNLVFYIERTYRTPD FGMWERGTRYNNGKPELHASSLGTVKAALEAINGFNLYGSTGTSASVIYVDIDGHNRN RTTFETILPRESNSKNTDAALLLTVGWPAFATHDETLFEKTMKKCVRRLEGRFGLRRF HRDGYRTELEDNSKSFYDEHETAQFQSVESQFPIFLACISLTAYIRANQEYGDIYFKK LQKCLVADDSVPGGYIVPECYCVDEFLMDKERSQPNSTELYALSHQEFGHHLWSNAIY IILMLKREGLIHSGDIDPINRHLPASQRPKMFNRHSAFQGSMEGDPVVQVALISESSR LQMMLSTYGITTQTPHEVEPVQIWPSWRMVKVFECLGRDKKMNLSGRPQRPFGPLSTS KVFRVFGDTVLCYPLLFEVKDFYVSSDPAVLIDDIKRDIEFVARRWKLAGRPTMCVVL REENVAGEYFDHILDLLVQLKNGHINGIRVRLGRVHQLLNSCCIEHIDFANSDDLEFD IDIMEETHDNSAIFSRLSLKEGIDDEMTHEKDVTPRTDHELYQIIEKDDMERPRLLAF AIWILWSRTHSDLLVHNYTLKERLEKVYRRACQLRLWWLVRYCAGRLHKAMNSLAPAI TNMLVRGKQITLGVRNRPGAREEIIVRPIAPSDLNRLLFECCPADEPQAAVFHQELII ACSDLMSHNPQVFEGVLTIRLSWLSDAISMLLNYVRATGALKIPGIVTGTPPTPGTTG IPTALNRMPVNFYDRVWTILERSKHGIIIADQFLPQQPTLSDMTRFELTFSYKIEAML SRISHPEYRQLLVEVEIIDSRFQLLSIIATILERNPEIAFTHSRIDCDSLIKKGFAMF AAEEGIKDLNDLTPFYQLEGQALSTSTATFLTKVNVAVVEFILAGRHFSQVINIFGEG TPEEKTLPNQAHRGKMPKILYTGRASSEKKKRHLGGNHTPHQSQLHLPTPTTLNPGAI TPGAVTPGPLTSHSGGQGQDESCRLQ" assembly_gap 310683..310880 /estimated_length=198 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 312426..312868 /estimated_length=443 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(319948..320049,320124..320689, 320737..321137,321178..321291,321341..321506, 321605..321803,321850..321936,321983..322051)) /gene="CBG03383" /locus_tag="CBG_03383" /standard_name="CBG03383" /product="Protein CBG03383" /note="contains similarity to Pfam domain PF00498 FHA domain contains similarity to Interpro domains IPR018370 (Chaperonin Cpn60, conserved site), IPR000253 (Forkhead-associated (FHA) domain)" /note="Partially confirmed by transcript evidence" /db_xref="InterPro:IPR000253" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR008984" /db_xref="UniProtKB/TrEMBL:A8WUX3" /protein_id="CAP24284.1" /translation="MSFGWVTLVATPKSHPFEERRVKVNSSTDPVKIGRAVARIQAAS DNAVFDCKVLSRNHAIMWFRDGEFWLKDTKSSNGTFVNNEKLQQIGNGRDTDVRRVFS GDIIQLGVEIVENANKVVYGCIYAVINCFNADGKLIESIGPACEEGQRTTSALVSNRK LFQMQQYVSEAQHREKQREDKIGELMSIIAANEKAAETAWKALVNEDRLLARIESLEA QLSILSNNNNPDKQKEELLKMIDEKTKFEAMTKEMVRRLIEENGETTSRFKDMERSLE TTEQTYQQLRSRNDDLEMALSETTEMYDSKVSELELTSAELLEKQKQLSSSEEKVQDL QKKNNELSNSSVINQTASGLSHLLAKAIEKGSFIDAEQLHELISALKLASYLPPHVRE TPSSSDTSSASESELRTQLINGCSTIASPEESSADGGAMKKQQDKTTIETYLKSILEL QSKNRELELTIASLTEKENQEKSESYSSEADYIKEPLEMSPSGNVSFCPEAANLSGSS TSGSSQAPLMQKQTTVIKRPDGLENLLLLVSLVPLLALILSAIAPVQRRFSSSKVEKE E" CDS complement(join(323812..323929,323977..324128, 324242..324442,324490..324722,324770..324995, 326009..326071,326119..326228,326281..326399, 326447..326569,326620..326729,326776..326925, 327018..327101)) /gene="CBG03384" /locus_tag="CBG_03384" /standard_name="CBG03384" /product="Protein CBG03384" /note="contains similarity to Pfam domains PF02886 (LBP / BPI / CETP family, C-terminal domain) , PF01273 (LBP / BPI / CETP family, N-terminal domain) contains similarity to Interpro domains IPR017942 (Lipid-binding serum glycoprotein, N-terminal), IPR001124 (Lipid-binding serum glycoprotein, C-terminal)" /note="Predicted" /db_xref="GOA:A8WUX4" /db_xref="InterPro:IPR001124" /db_xref="InterPro:IPR017942" /db_xref="InterPro:IPR017943" /db_xref="InterPro:IPR032942" /db_xref="UniProtKB/TrEMBL:A8WUX4" /protein_id="CAP24285.2" /translation="MRVVLLFGFCIPWISGQEINRDYSPLLDKNTSAANPGIYLRIMP NGLAYLREVGMKVINEQILKLQLPNIREPIENGEVSIYNLMMSKYWAPQEYSLDMSEP STFAWSMSKMHLRAAGDFQATLNSPLLLPTVPITGHFEALLGHISLYITVNMERNPHG APQVRSTGCRSSIGYVDLNVRNTGVITDFFINAFKAFLIGNFKPQVEQKMCKMIESII DRDMNILLSNMPLKIRINENNLDIIGETFGVAPKKHHRAGKLSSFNAKNITLTHFVQR LRDKELVLDYQMLTAPFVQNGAINMLSKGEISWRGHGGTPFFPPNIRIPAPHGVHMIE FYASDYLANSMLYHSYKQHFLDVTVGPESSPQLQGLLVTTCGPAGFCLGEFLGTLGEQ FPDRQVEIEFFAKKAPLIVFIDNRSRFRLHGGLNMYVRPSKPTQVKQQILKADTTMTA NVNLWINGSVIVGNSTIENLDFKLLETKINDVDQDSFSDLGLFGAEFLEKLLTEILQM GIALPTMQGVILKSPKLTFHDRYLKVSTYFKLDEEYAGSLVRGAVGKTLRGPLR" CDS complement(join(327926..328212,328293..329067, 329114..329787,329831..329951)) /gene="Cbr-tkt-1" /locus_tag="CBG_03385" /standard_name="CBG03385" /product="Protein CBR-TKT-1" /note="C. briggsae CBR-TKT-1 protein; contains similarity to Pfam domains PF02779 (Transketolase, pyrimidine binding domain) , PF00676 (Dehydrogenase E1 component) , PF02780 (Transketolase, C-terminal domain) , PF00456 (Transketolase, thiamine diphosphate binding domain) contains similarity to Interpro domains IPR005476 (Transketolase, C-terminal), IPR005475 (Transketolase-like, pyrimidine-binding domain), IPR020826 (Transketolase binding site), IPR001017 (Dehydrogenase, E1 component), IPR005474 (Transketolase, N-terminal)" /note="Predicted" /db_xref="GOA:A8WUX5" /db_xref="InterPro:IPR005474" /db_xref="InterPro:IPR005475" /db_xref="InterPro:IPR009014" /db_xref="InterPro:IPR020826" /db_xref="InterPro:IPR029061" /db_xref="InterPro:IPR033248" /db_xref="UniProtKB/TrEMBL:A8WUX5" /protein_id="CAP24286.1" /translation="MTISEQLCHDLEDAANRMRISSIEMTCASKSGHPTSSTSAAEIM STLFFSEMKYDIAEPKSASADRFILSKGHACPILYAAWEEAGLLSHEQVLSLRKIDSD IEGHPTPRLNFIDVATGSLGQGLGVATGMAYVGKYIDKASYRVFCLLGDGESAEGSVW EAASFASIYKLDNLVAIVDVNRLGQSQATALGHDVETYKARFAAFGFNAIIVDGHNVD ELIAAYENARNTKDKPTAIIAKTFKGKGIEGIENEDNWHGKPVPAETIDAIKARFHGS QKGKLVAQKPINDAPAIDLHVGSTKMPAPEYKKGDKVATRAAYGTALAKLGDVNPRVI GLDGDTKNSTFSEKLLKKHPDQFIECFIAEQNLVGVAVGAQCRDRTIPFTSTFAAFFT RATDQIRMAAVSFANLKCVGSHVGVSIGEDGPSQMALEDLAIFRTIPGATVFYPTDAV SAERATELAANTKGIVFIRTGRPALPVLYDNEEPFHIGQAKVVKQSAEDKVVLVGSGV TLYESLKAAEELEKEGIHATVIDPFTIKPLDGKTIAEHALRVGGRVVTTEDHYAAGGI GEAVSAALADYPTIRVRSLYVKEVPRSGPPDALVDMYGISARHIVAAVKNFQ" CDS join(331769..331852,331898..332000,332044..332411, 332458..332939,332984..333095,333227..333304) /gene="Cbr-lipl-7" /locus_tag="CBG_03386" /standard_name="CBG03386" /product="Protein CBR-LIPL-7" /note="C. briggsae CBR-LIPL-7 protein; contains similarity to Pfam domains PF04083 (Partial alpha/beta-hydrolase lipase region) , PF12697 (Alpha/beta hydrolase family) , PF00561 (alpha/beta hydrolase fold) contains similarity to Interpro domains IPR006693 (Partial AB-hydrolase lipase domain), IPR000073 (Alpha/beta hydrolase fold-1)" /note="Predicted" /db_xref="GOA:A8WUX6" /db_xref="InterPro:IPR006693" /db_xref="InterPro:IPR025483" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8WUX6" /protein_id="CAP24287.2" /translation="MRINIFVTLLFLFRSETLAIDEECYMTVPEIGKRFGYDSEVHLV RTTDEYILELHRFPCKNNEKCDTKSKRPIVFLQHGLLADGFSWIPNLANQSAGFVFAD AGFDVWIANSRGTPASQKHIGYGPENQKFWNFTWQQMSEYDLTSSVDYVLKETKQKFL YYLGHSQGTMIMFSRLAENPEFAKKIRHFHALAPVATVSHIGGLFGLFGKQFLTYAEI LLGRLPYSPLSIPRPIQKMISYMCSKFLMQSICTLDIGFIDGNEKQFNQSRVGVYLCH TPAATSVKDLQHWIQLVESQNVAKFDYGPVGNQLEYGQPTPPVYDLTQIKTPTYLYWS GDDILADTQDIRDSILSKMNKAIAGSIELPHYSHMDFVFGINAAKDLYPGIIKTIQDD FDKYRISQMHKLNKYF" CDS join(333524..333586,334239..334394,334469..334753, 334804..335229,335452..335549,336382..336565) /gene="Cbr-ech-8" /locus_tag="CBG_03387" /standard_name="CBG03387" /product="Protein CBR-ECH-8" /note="C. briggsae CBR-ECH-8 protein; contains similarity to Pfam domains PF00725 (3-hydroxyacyl-CoA dehydrogenase, C-terminal domain) , PF02737 (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain) contains similarity to Interpro domains IPR006108 (3-hydroxyacyl-CoA dehydrogenase, C-terminal), IPR006176 (3-hydroxyacyl-CoA dehydrogenase, NAD binding)" /note="Predicted" /db_xref="GOA:A8WUX7" /db_xref="InterPro:IPR006108" /db_xref="InterPro:IPR006176" /db_xref="InterPro:IPR008927" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8WUX7" /protein_id="CAP24288.2" /translation="MDKVPDDIKSYMMEAYQLASRWSLPNNRGDHTNSKSIPLKSVAV IGGGTMGRGIAMAFCMAEFETILVELNDQLEITYAREKSFKRLKDSKIEKLRKNLQIT TDFQKLQNCDLVGSSKYDVPCYEQVQIVEAVFEEMKLKKELFTKLDGICKTSCIFGTN TSSLDLDDMSSVLQNPTKVVGIHFFNPANLIKMVEVIYGSHTSSEAVATAFEACRAIK KLPILVGNCPAFVFNRLLGVYLNQSQKLMYEYGYLPHQVDKIVTSFGFLMGPLTVADM NGLDVMEKLKSENGWPASDFEKEVWTQKRYGRKRDAINFLLYPMMNEGLLCIEEGIID HESLIDIMFILGFGWPVATGGPMNFGRQQGIEKVANTLIFWSSLEPENRIYQVAQTLR KVNKKHFSSKL" CDS join(338843..338905,338951..339106,339154..339288, 339343..339462,339508..339934,339982..340243, 340291..340474) /gene="Cbr-ech-9" /locus_tag="CBG_03388" /standard_name="CBG03388" /product="Protein CBR-ECH-9" /note="C. briggsae CBR-ECH-9 protein; contains similarity to Pfam domains PF01210 (NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus) , PF00725 (3-hydroxyacyl-CoA dehydrogenase, C-terminal domain) , PF02737 (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain) contains similarity to Interpro domains IPR006108 (3-hydroxyacyl-CoA dehydrogenase, C-terminal), IPR011128 (Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal), IPR006176 (3-hydroxyacyl-CoA dehydrogenase, NAD binding)" /note="Predicted" /db_xref="GOA:A8WUX8" /db_xref="InterPro:IPR006108" /db_xref="InterPro:IPR006176" /db_xref="InterPro:IPR008927" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8WUX8" /protein_id="CAP24289.2" /translation="MDKVPEEVRNYLMEAHQLAGQWSLPNNRGDHTNSEPNEINSVAI IGSGTMGKAMAICFCLAGFETVMVVRSEQKCWKELEDMFSIEKAFKRLNDARIEKIKS KLHITTDLQKLKDIDLIVESVFEDMKLKKELFTTLDGICKSSCIFGTNTSSLDLDEIS SVLGDPSRLVGLHFFNPANVIRLVEVIYGSKTSPTAIATAFQACESIKKLSVLVGNCP SFVFNRLLYVYFDQSQKLMYQYGYLPHQIDKIITNFGFLMGPMTVADMNGFDVMEKLK KENGIEPNALEKEMWRQKRFGRKTNRGFYKYDKKTQRKEIDPEMEKLVRQYSQNAKKN IQILNDQVLLFQSFHRNFCFQDLINFMLYPTVNEGFRCLEEGVISHESLIDIMFILGF GWPINTGGPMRFGRTEGMEKVANTLLHWNTLEPNDRAYMVAEELKNIDKKNMSSKL" CDS complement(341982..342104) /gene="CBG26391" /locus_tag="CBG_26391" /standard_name="CBG26391" /product="Protein CBG26391" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IFF0" /protein_id="CAR98630.1" /translation="MIRNLTAELQTPENSQNDRKSSEKYMLYLIDLYCMGNINK" CDS join(342730..342973,343073..343330,343385..343719) /gene="CBG03389" /locus_tag="CBG_03389" /standard_name="CBG03389" /product="Protein CBG03389" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WUX9" /protein_id="CAP24290.1" /translation="MKHLFLVFLFAFTQNGYSQTTRNCYTCASTDLRNKWYLTGLAPV PDTYFAGSCANRATTMNRESCSGPCMTMVFENPDEIGSTQAPTTYVVRGCHRTLTNVV TDRITNNGDFCELDTTYRMADRRGNVVNVRMMTMLCGDQDLCNDNEFIQADFMVGVSC ANQTNNNLLNNAPLNCYDCTPTEGDNCHESKCTKKYCMKQQVKLDGGFQLTKTCTNVN VLGLDNACQTFDVLTNPGGVAVKSQYTQCYCKDKQFCNSGISYSVILSSFLTIFFRSL FL" CDS complement(join(343787..343939,343986..344446, 344493..344785,344835..344982,345030..345174)) /gene="Cbr-nas-12" /locus_tag="CBG_03390" /standard_name="CBG03390" /product="Protein CBR-NAS-12" /note="C. briggsae CBR-NAS-12 protein; contains similarity to Pfam domains PF01549 (ShK domain-like) , PF01400 (Astacin (Peptidase family M12A)) contains similarity to Interpro domains IPR001506 (Peptidase M12A, astacin), IPR006026 (Peptidase, metallopeptidase), IPR003582 (Metridin-like ShK toxin)" /note="Predicted" /db_xref="GOA:A8WUY0" /db_xref="InterPro:IPR001506" /db_xref="InterPro:IPR003582" /db_xref="InterPro:IPR006026" /db_xref="InterPro:IPR024079" /db_xref="InterPro:IPR034035" /db_xref="UniProtKB/TrEMBL:A8WUY0" /protein_id="CAP24291.2" /translation="MLYTTDISLFFVILLNLCTVSIAVKQSWEINQDLVTNENKEHTV FGDMLLTPAQLLRYENSKDSDLTIRGVSIKGNSNNRWENNIVPFVISPQYSATQKKIL ISSLRYFERVSCFKFVDRTTQNDYLFIVPLDGCYSYVGKIGGRQALSLAADCIADYII WHEMMHAIGFEHEHQRPDRDSFIRVDYSNVIPGQMINFDKLQQSQVEFPDSYDYKSIM HYDGYAFGRVDGVRQVRLATMIPLKPGVRLEDNMKFTATDIEKLNRLGQCGTRGGQYS NQGVVAATCKDVATAISCEGNRRVRSGNAAYTVILNSELQRGMCKNPFYKQMMIKSCQ KTCRLCSYARSIDEDENLTPNTTRKPLKCEDKHPRCDVYSQNGFCSLPFYDDVRYQLC AKTCNLC" CDS complement(join(346380..346438,346495..346685, 346736..346906,346952..347065,347113..347300, 347348..347434)) /gene="CBG26392" /locus_tag="CBG_26392" /standard_name="CBG26392" /product="Protein CBG26392" /note="contains similarity to Pfam domain PF00782 Dual specificity phosphatase, catalytic domain contains similarity to Interpro domains IPR020422 (Dual specificity phosphatase, subgroup, catalytic domain), IPR024950 (Dual specificity phosphatase), IPR016278 (Dual specificity protein phosphatase 12), IPR000340 (Dual specificity phosphatase, catalytic domain)" /note="Predicted" /db_xref="GOA:B6IFF1" /db_xref="InterPro:IPR000340" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR016278" /db_xref="InterPro:IPR020422" /db_xref="InterPro:IPR029021" /db_xref="UniProtKB/TrEMBL:B6IFF1" /protein_id="CAR98631.1" /translation="MWKITENLYLAQLPMIVGPTSKAEFAKNNIERVVTLTTEPIPEN KRLKDVDYKFIRLLDMPNEPILSNGLLEEALKFIDEGIESETNVVVHCLAAVSRSVSV CAAFLMYKNRWTMEKALNMIKGIRKFIGPNSGFLAQLKIWERCDMDFAPERYANLSID IPGAFDADTKTIWRQPVLDDRTETRFKCRQCRKVIFSSDNIAHPQLSDLCQKYLIEPM EWLRITGVTCSINHSCGAKLGNFIATGSKCNGLKRWIFIDKSKIDKVEIGI" CDS join(348693..349034,349085..349215,349265..349880, 349940..349966) /gene="Cbr-tram-1" /locus_tag="CBG_03391" /standard_name="CBG03391" /product="Protein CBR-TRAM-1" /note="C. briggsae CBR-TRAM-1 protein; contains similarity to Pfam domains PF08390 (TRAM1-like protein) , PF03798 (TLC domain) contains similarity to Interpro domains IPR013599 (TRAM1-like protein), IPR016447 (Translocation associated membrane protein), IPR006634 (TRAM/LAG1/CLN8 homology domain)" /note="Predicted" /db_xref="GOA:A8WUY1" /db_xref="InterPro:IPR006634" /db_xref="InterPro:IPR013599" /db_xref="InterPro:IPR016447" /db_xref="UniProtKB/TrEMBL:A8WUY1" /protein_id="CAP24292.1" /translation="MVKPQGGPKASKKAQPPVFSHDFVIQNHGDIMSCIVMVFIVGLM FPSTHSLASIFIAPQYNGTYNETNEAGQVQEVYGYLSGLWDLPAIFFYSICWIVVHAV VQEYGLDKISKKTHLSKASTFKFGDSFHQLFFTSYSLGHALYLITERTADFLDIKKIW LGYPVDHRVMSASYKIFFLLQIAYWIHQFPEFYLQKLKREEIRQKTFQAVIHIVFISA AYFFNFTRVGLVLLVLEYFTQLIFHFARLSHFLGRKTVSAPLFKAYNITFVLARFGSV ILAVMTFWYGLRQAELPYVDASAGNFNTAAIRLNVLLGIVLLQLYLLYSFVSFHMGRF RESNAKKEKKKASAAAAAVPKKEKKRQDSESDSKKKN" CDS join(350449..350542,350587..350821,350870..351005, 351051..351395,351445..351613,351662..351750, 351791..351905,351950..352020,353397..353494, 353553..353628,353676..354155,354199..354402) /gene="Cbr-qns-1" /locus_tag="CBG_03392" /standard_name="CBG03392" /product="Protein CBR-QNS-1" /note="C. briggsae CBR-QNS-1 protein; contains similarity to Pfam domains PF00795 (Carbon-nitrogen hydrolase) , PF02540 (NAD synthase) contains similarity to Interpro domains IPR003010 (Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase), IPR022310 (NAD/GMP synthase), IPR003694 (NAD synthase), IPR014445 (Glutamine-dependent NAD(+) synthetase)" /note="Predicted" /db_xref="GOA:A8WUY2" /db_xref="InterPro:IPR003010" /db_xref="InterPro:IPR003694" /db_xref="InterPro:IPR014445" /db_xref="InterPro:IPR014729" /db_xref="InterPro:IPR022310" /db_xref="InterPro:IPR036526" /db_xref="UniProtKB/TrEMBL:A8WUY2" /protein_id="CAP24293.1" /translation="MDQWDRRCRVATCTVNNWALDFRGNYERIVKTCSEAYALGARIR LGPELEIPGYGCADHFFELDTERHSWEMLSKLVEKSKEWPELLVITGLPTRFRGLLYN CAAALKNGKLLFIRAKMGLADDNVYRESRWFVKWTETFKHYEMPLNSQIHFEQSTVPF GDGILESSDNARVGFEICEELWSSRSTNIRLAEQGVDIICNGSGSHHILGKSNYRINQ LILGSSAKVGGVYLYANHRGCDGDRVYYDGASSIAQNGDLLAQIHQFDIEDTCVATAI VDLSENSVFRQMKSSDRGNASDQKTVVPIRFDGNMAEGVKFNEKCTERMTNVEDLQLS PIAELCYGPPAYLWTYLRRSGMAGYFIPLSGGQDSSAVAAMVRLMCEKVCGAVKKRRE TDGGDDPAYYLGGKKVTEDVAELCNQVLFTCYMASEHSSDETRQCAEGLARNVNSNHC GIFIDTVVSSILKVFKVAYGFMPSFQNSDNREIMALQNIQARIRMVLAYLFAQLALVS HKRPGGLLVLGTANVDESLVGYLTKYDCSSADINPIGSVSKRDLRQFLEIAHDKYGMT ALRSVIDSTPTAELRPLVDGKVSQTDEAEIGLTYDELSVIGRLRKPGGMGPYGMFLKL ITLWGDKYSVEEIEEKVRKFWWRYRVNRHKATVSTPAIHAENYSPDDHRNDHRPFLYP DFSYQFERIREKVEELKQSRN" CDS complement(join(352115..352908,352958..353039)) /gene="Cbr-col-124" /locus_tag="CBG_03393" /standard_name="CBG03393" /product="Protein CBR-COL-124" /note="C. briggsae CBR-COL-124 protein; contains similarity to Pfam domain PF01484 Nematode cuticle collagen N-terminal domain contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal)" /note="Predicted" /db_xref="GOA:A8WUY3" /db_xref="InterPro:IPR002486" /db_xref="UniProtKB/TrEMBL:A8WUY3" /protein_id="CAP24294.1" /translation="MDIDSRIKAYRFVGYAALTFSTIAVLSVCVTLPIMYNYIHHTRK VMHNDIVECKSEAERLFSQVNSIPDLVMAHNRTARQVGEGNGQCEGCCLPGAQGPPGT PGRVGRPGKPGAPGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPL GPPGPPGPEGSNGEPGNKGPAGPPGPGGKPGPAGPPGENGNNGEPQPGAPGEPGQPGQ PGPRGPSGEPGKDGTPGGPGEKGASGEPGAPGRDGQPGHPGQPGKDGRQGEKGVCPKY CALDGGVFFEDGHRR" CDS join(354846..354899,355199..355343,355389..355470, 355520..355712,355976..356065,356109..356225, 356270..356390,356438..357146,357194..357427, 357478..357594,357644..357820,357868..357966, 358019..358448) /gene="Cbr-abt-1" /locus_tag="CBG_03394" /standard_name="CBG03394" /product="Protein CBR-ABT-1" /note="C. briggsae CBR-ABT-1 protein; contains similarity to Pfam domains PF12730 (ABC-2 family transporter protein) , PF12698 (ABC-2 family transporter protein) , PF00005 (ABC transporter) contains similarity to Interpro domain IPR003439 (ABC transporter-like)" /note="Predicted" /db_xref="GOA:A8WUY4" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR026082" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8WUY4" /protein_id="CAP24295.1" /translation="MDVFDNFRLSKHKFVRMLICIPKTVVDYRFSTVTDAIRLTHLDF PALEFTKDLEKARKRLSDGDIDILILFTKLIETGKDVEYNIISQNGDLNKHYCIHCDD RRKETWGNAIESQIIVNRFLYWMVRSRGFNHRKPHFHLSNIYVKGTDSDPMYSKRQTD LFIAWLILIPICSRLIDLWNDERESGFYKLLLSLRVRRIEYFIAKYVFWYGISLVISL TVFVVNVSVVPAVFTATYLPFLVCYVACIIMFTVFLATLFPGSPLVSKFVGFLLMAAG EFGFGNVYQGTLFFQLSVRFFGKTEGDGYWIDAVCLMCMTVNSVLMMALSVYLDTFFF SYTQEPLKFYFPLERSYWMPAPRGPLVDKFFIKQILVPKVVKNESALKKSVEAASPIK KTTTNGKEANPKEISHFPLVVFYGICKRINNHWKVNQLSLTIRLGEILTLYGHYGCGS DEILSILSGQMKPEYGEVMMEKSQRYLIVSMTADVPNLNYLTVTNYLEFVCSMRGVSL SFSILTEMLEELDLVKVQNRPLDLLSTTQKERLRIAAVFVGHPDLVLIDWPTKESLPE WKYMILRFIEKRKENKAIIISSYDAEETEAISDKVVLLSEGYVVLNGSSEIYKQSMNS VFEVRLWPLFAFTDDQIRGMIAAVTLGDEQMKNDAKFFETSNGKIRITLPIIYRRSIP LIIRELEAIAAQYEIAFYEFSKPNIHDIYTKIPVSTFHFSDSGFLRILDSGFWILDSG FWILDSGFWILDSGFWILDSGFWILDSGFWILDSGFWILDSGFWILDSGFWILDSGFW ILDSGFWILDSGFWILDSGFWILDSGFRFSKIAFRTFNFTVPAMNHCNINHWKTMTN" CDS join(358535..358667,358715..358855,358902..359033, 359078..359189,359237..359491,359715..360165, 360213..360608,360656..360831,360882..361145, 361195..361498) /gene="CBG03395" /locus_tag="CBG_03395" /standard_name="CBG03395" /product="Protein CBG03395" /note="Predicted" /db_xref="GOA:A8WUY5" /db_xref="InterPro:IPR026082" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8WUY5" /protein_id="CAP24296.2" /translation="MYFFKNMVRILKDRQFLYQAAAIFGLFLVLGLLTLISYHGTHQH YTHEISFEANDRPITIYCDDCNSKGITTSQVTFVKKNDRQQLMDNQAVLYWKPKSAKA DLELFSVSRGDETFTMVVQNFAISQLIAKMIGKPPRIKPILESGEFRTSITETGFSMV FNDVSKNQAAMILSESYPLMYTFGVFQTFVYTLSAILPLRLISVNMRPDSLLFPWPRY LYFSLIFGANLIMFMVLSIILISIFLFMGFFQTSAAFCFFRLFGAWFLSYISTLPLIY LLVFTIQNSMAVVPTVMAISSLLVCLPNMVSSFSAENQMSLQSLLKFVSWTCMISPPT SLQVLASFLNAGEFHEENNGSEFKILLSDFLWSFSAITALTLFCGAHIWILVIFAACV FQPGFSLIRQHWFISSTAIWSTFERGTTLKPGARIKNSFLFPASPAPQTGDSTTGEKP SIADGTSRSAAGREIDAKPSLDYISGASSSNEDMSYITNYEEHLIGKMATMKKWNDNQ EIPVDNSATYLLGDQTKLKSSLLKTIAETNPKEQIAYVPFEECLPSIYTPFELLVNVA ACHGFEVTEEHINYLLNAFGMKSLAATPISLLTDADRRILMLLTKLVIKPSIVIIDQL EMFLPHPKMMTVWAICARLRADGVAIMYTSRHNSFAEHTATCCAHLYKCQFVSTLPPS AIKARMGYTVLEIVPKDIEPLKLLKMIQMAMPDAIQMPSTRQTLTVILKRDDVDTVEM VFFNISSESHYYRFQVLGNIRTMSSNIQRYSLRSGNFDEFVASAFGK" CDS join(361748..361853,361902..362097,362140..362259, 362310..362457,362508..362670,362712..362805, 362846..363089) /gene="CBG03396" /locus_tag="CBG_03396" /standard_name="CBG03396" /product="Protein CBG03396" /note="Predicted" /db_xref="GOA:A8WUY6" /db_xref="UniProtKB/TrEMBL:A8WUY6" /protein_id="CAP24297.1" /translation="MSQNYNWNDVAYEMAPISQYTDLYSNQPRIYMFEGAKIIDLILL LLTAVVTTVWLIILTRAESNLTKSLLTVTVSQIFVNLLVRAFKSAIILFIEYPQFSWL FVASSVETSFHYTLYLQYTSSVLLYVFLREKDIKSSWTLFYYIPSIAVALFVSILNVN FNKLLLSFPFYIYVIFYVGMVVSNVVILIGIIASCTKYTREKLGIRCRLFLFVFSASP PTLFNTVITIMDLLFMVVGITDQFPIPYIVMTTYRYKAFEITPLSILLAFFALMPDLR KWKTSKTTTTAEVTSTVTESPSISSPSPILPTTVLETSVPIPHQLEDIPSVQTTTAPI ATYGNMNYGMGALVVHIQPMNN" CDS complement(join(366574..366771,366821..366988, 367033..367500,367560..367754,367771..367836, 367881..368741,368791..369852,369900..370147, 370204..370342,370389..370595,370649..371024, 371075..371139)) /gene="Cbr-gon-4" /locus_tag="CBG_03398" /standard_name="CBG03398" /product="Protein CBR-GON-4" /note="C. briggsae CBR-GON-4 protein ;" /note="Predicted" /db_xref="GOA:A8WUY7" /db_xref="UniProtKB/TrEMBL:A8WUY7" /protein_id="CAP24298.2" /translation="MEQNPEEDQPSTSSAFDPNVSRESIEEKNDNEMERLLEATDKIL ENKAKSMNLSSLNVRSILHHLIKYPATIDVLLGIRENDSNLPSVRNMRSRKKADGSVA SSTNNTPKKFALRIEDKGPKNFLDLEYEEDDEYDDDYVEERDCSRQNDGEAEESEDEE LDEEEEEEDDDEDEEESKEVDKDDNEKQEKTGEEAETSSDLDNEELNELLFGEGQEQD ESHSLQMTLNDTRPGSAALVHTLDNVVDDDDYRNFVISIKCPAEDFDEKAGDDTEDDT EDEDYNVIADNLNVEDWDETRQDKTTQIPRHEVKALMMDTLLAEKEIPLNIFPEETTH AEDPKKRQQRKSIDTPQKDELTASSAESCSLLRYAPVTFRPQEIDQLRTQLEQHVQLL TQFVVTCHHDDTLSHVRNDSQLMLNELDDIRQQKPSTSVFNVSNLDAAITSCHDINDF PKVDDSLLNYAQNTDRCGGQALRPEAAAVLSRSEAIRYPGLLPPCQPIYIEKPLPFLN EEDVMLAVAILQFHHLPRRADKEVPDRYTMIHKHCLPARDPYKIRSHLKSMRKESKNP IHQIIQVRITLTHIFFQLFNFQAAEQGISKITIPAKTWRQTDSPIYTWPSVSQPGWFR EFKKVFNVTEDKQIHRKSDSTLIMTPIKQREKYMSSGSHDDKPEYVDIGKGPDGRTIK MNTAHVEELVEKLNYVKSSNRRKNPTPMKLSTAPETENVAQKTKPSRSSKAARKLECT KDTSKNSANSSVKKEMIDEQKPSCSYTYESNEDYSFCQSVQNCSIPTTTRKSRRPQSD SRQVPETPGDLYGIDTNSLSGHSYPIPPTPGRRSPDEHDDFFMDLETNSLLWARESPA LSLVNPRTPRGFSMESEYMESDPTDFSSLNDYELCDLDAVEEPSSSYWNVGYSTDLDY ENSNSGSIPDAPPSASPVNFNMPEPVIEDDTSMPGLDLVPPDDEECEEDAVSEKDETP VKVGLAGSRPPLRMRKLVAAGNTAIRASRKRTRAERCSVISIVFQEAMGAIGLDDELY HEKQKDKIMRKVIDDIGKRLFMHGDTYEKFKETILNEELSEIERVSRIMQILKNHREL LILVLLYAPPEAIVSDYDLDFNSLSYKSAVEMMMAIEVNLYYYFLIFINFQRYITAAK LKEPSLKGLFRFVQTFLEDDPNLTDEQATMRFYQLFGQDRPLWKKLESHFWCLPFKRK APRWEQFEYVDLTGLETRKKPKSDWKNVPPRFETIDNIDEVLRYPYKPAKNEPPSNLV VKCGEMCIQKEDESFIQLEITERHWTKQDDIDLLTAYNEALKTVRNFTESMIPSFVPD LPFGEKSKVARLQYLLEELRKMEEEDAEGN" assembly_gap 371530..371749 /estimated_length=220 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 372294..372892 /estimated_length=599 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(376852..376985,377394..377484,378190..378337, 380596..380784,382787..382914,382932..383637, 383685..383865,384153..384231,384276..384405, 384450..385006,385351..385814,385863..386145, 386194..386653,386699..386832,386881..386940) /gene="CBG03399" /locus_tag="CBG_03399" /standard_name="CBG03399" /product="Protein CBG03399" /note="contains similarity to Pfam domains PF00047 (Immunoglobulin domain) , PF00041 (Fibronectin type III domain) (3), PF00102 (Protein-tyrosine phosphatase) contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR003961 (Fibronectin, type III), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR013151 (Immunoglobulin)" /note="Predicted" /db_xref="GOA:A8WUY8" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR016130" /db_xref="InterPro:IPR029021" /db_xref="InterPro:IPR036116" /db_xref="InterPro:IPR036179" /db_xref="UniProtKB/TrEMBL:A8WUY8" /protein_id="CAP24299.2" /translation="MLRKHFIVFPFLLFWNHHLVESLSVTSKNATEALLRCPPAESFI RTHMAPDFETPRLVRRLDWFQDDSLVASYQQGHVEGVEKELEKKKIGLDMPHISVDGH QNFHSFLNSWDKKKEKMVSLNIGRLADSSRQWWVADGRYQLIRPFYTLRVSPVTPEDS GTYRCRLETDPLFSSPQSTATQELAVMVRPVAPSSPEIKSFTNRSITLVWTHNAARAH RPILRFSVSVRTVPFASYCPPSIVNFRFVMAAPSNATTVIVDNLSPYTLYAFSVRAEN SAGSSDFGPETTFRTLGEPPNRAPQIQKIRNVTSECVEVTVTPPDEMNGELEKYLVLI QAVNETNPRKMTFDKPTSTPLTICALTPSSEYALAIEADNGFGTSPQATLVFRTEDSV PNWSPSTIKTTPVVGKPEIIVLWLAPPMNATEKVVKYHLYYKANNEDQWKIEHLNVNP NEVKSKMFKYRLVDLNPNTLYRIRVSASTSKGEGSQSADSLAQTDVGEPGTVIFKDLN FDCKNGVKLSWNYEPSVNSKKSPTFTVKITNQTTSLQFNTTRQTLDIIDLSLYDEYSL RIIVLERSTIDNTTILIGKYSDNHRFILKDKCAYQSSFCSPGEKCAKLTSSAANPQYI SVLIVIFAIIIFAFICFIIVHFARGSMNFKHLLKKKEKCVYLEEISPLVYGRLNRSDM ISMKCYCLDSAGQEDIPVELFYGYVEDLNRNDALKFKTQFQILETQTSGIDQADSGES TSSADENSQKNRYNNIGAMEATRIRLNSPTGNDYINANYVDSCNERNAYIATQAPLPS TFSDFWSMIWQERSNVIVCITNMVEDGKVKKGMSYFPNSIFRFQRKCDQYWPSVPDSP QNFGNYQVTLISESTNAHFSHRVLDLKIAKSVPAAERKIHQLHFVGWPDHGVPSSVFP LLNFIHYASDIHSTGPVVVHCSAGVGRSGSYILVDSMRRHLISFRRLNVQGHLTHMRR QRAKLVQTLEQYIFCHEAIRQLIRHGITRVHSDLFMRYLHYLSEENLNGKTRMQLQYE DVCECKHQPRCLIDSDVLTLPGYHRSDEFMVGSWSHECEELWKLIWKRKVQTIVVLNQ RDSFWRKLHLCEDIQLQHGDNFVLMQREDQQLCVRIMNVARSDLDADFWREIENVQKQ RITYHDAPLLILAQKFPPNASSPTDSTSTLSLSMLFNDDSSLAFSICAATTLACQLET TGCVDVVQVLSSYTEIQCGIFSSKQEIEIIYEKISQLVEGTRV" CDS complement(join(387119..387250,387297..388298, 388345..388442,388870..388939,389220..389329, 389683..389722)) /gene="Cbr-gta-1" /locus_tag="CBG_03400" /standard_name="CBG03400" /product="Protein CBR-GTA-1" /note="C. briggsae CBR-GTA-1 protein; contains similarity to Pfam domain PF00202 Aminotransferase class-III contains similarity to Interpro domains IPR005814 (Aminotransferase class-III), IPR004631 (4-aminobutyrate aminotransferase, eukaryotic)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WUY9" /db_xref="InterPro:IPR004631" /db_xref="InterPro:IPR005814" /db_xref="InterPro:IPR015421" /db_xref="InterPro:IPR015422" /db_xref="InterPro:IPR015424" /db_xref="UniProtKB/TrEMBL:A8WUY9" /protein_id="CAP24300.1" /translation="MLPRLAKSSVLQQVRGVSAIANAEPSGPSIKTSIPGPRSKELRQ EMDIVHQTTSVRFHVDYEKSFGNYVVDADGNTLLDVYTQISSLPLGYNHPDLVKVATQ PHLITSLVSRPALGSFPRTDFAGGISHALTSIAPKGLKAVQTMLCGTSANENAIKTAF IWYQAQRRGGLGPDALHLESCMTQQKPGTPNLSVMGFEGAFHGRSLCMLSVTRSKPIH KVDIPAFDWPIAKFPRYKYPLDQNAAYNKKQDQECLADVEAKIAEWKRRDNDVAAIIV EPIQAEGGDHYGSPAFFQGLRDITAKNGVVFIVDEVQTGGGATGDVWAHDHWNLSSPP DMVTFSKKLLTGGYFYGEHLRVKEAYRIYNTWMGDPTKLLLLEKAVEVIKRDGLIDQS RQVGAEFQKRLGELQASSGGKLDQARGRGTFAAVDFPSGALRDKFVDLAISNGLHCGG CGDRSLRFRPSLVYTKKHLDLTFDLLDKTLKQL" CDS complement(join(390442..390597,390654..391095, 391559..391733,391785..391905,392030..392161)) /gene="CBG03401" /locus_tag="CBG_03401" /standard_name="CBG03401" /product="Protein CBG03401" /note="contains similarity to Pfam domains PF00004 (ATPase family associated with various cellular activities (AAA)) , PF05496 (Holliday junction DNA helicase ruvB N-terminus) , PF07728 (AAA domain (dynein-related subfamily)) contains similarity to Interpro domains IPR003959 (ATPase, AAA-type, core), IPR011704 (ATPase, dynein-related, AAA domain), IPR003960 (ATPase, AAA-type, conserved site), IPR003593 (ATPase, AAA+ type, core), IPR008824 (DNA helicase, Holliday junction RuvB type, N-terminal)" /note="Predicted" /db_xref="GOA:A8WUZ0" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR003959" /db_xref="InterPro:IPR003960" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR041569" /db_xref="UniProtKB/TrEMBL:A8WUZ0" /protein_id="CAP24301.1" /translation="MDRNELIGVAVRLVAAAAVSYLSLRYMTKYLDPNYGVNEDCKKK VAKLFKELGINREIELSEHEVRIATQFVGGEDVGADWDEIGGCEELVAELKDRIILPL RFAAQSGSNLLSPPRGILLYGPPGCGKTLLAKAVARAAGCRFINLQVSILTDKWYGES QKLAAAVFSVAAKFQPTIIFIDEIDSFLRDRQSHDHESTAMMKAQFMTLWDGFASSGD QIIVMGATNRPRDVDAAILRRMTARFQVPVPTAKQRSQILNVILKNETIQSSVDLGKI AQKAEGLSGSDLKEVCRLALLARAKATVASGGSVTQLEPLEQSDFESAVQKYMRAAQL LVEETLD" CDS complement(join(392310..392840,392887..393034, 393078..393261,393330..393444)) /gene="Cbr-rack-1" /locus_tag="CBG_03402" /standard_name="CBG03402" /product="Protein CBR-RACK-1" /note="C. briggsae CBR-RACK-1 protein; contains similarity to Pfam domain PF00400 WD domain, G-beta repeat contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR001680 (WD40 repeat), IPR020472 (G-protein beta WD-40 repeat)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WUZ1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR020472" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:A8WUZ1" /protein_id="CAP24302.1" /translation="MVQEQMKLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILV WDVDSVAPIDGGAIGRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGV STRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTV RFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGK DGQAMLWDLNEGKHLYTLSGNDVINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEEL KPEIASSGSGRGSSPQCISLAWSQDGQTLFAGYTDNIIRVYQVSIRASN" assembly_gap 394045..394491 /estimated_length=447 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(396764..396853,396963..397090,397388..397471, 398831..398906,399358..399462,399883..401239, 401284..402022,402071..402271,402318..402557, 402609..402885,402932..403160,403207..403382, 403501..403711,404119..404257,404365..404684, 404734..404771) /gene="Cbr-pxf-1" /locus_tag="CBG_03403" /standard_name="CBG03403" /product="Protein CBR-PXF-1" /note="C. briggsae CBR-PXF-1 protein; contains similarity to Pfam domains PF00788 (Ras association (RalGDS/AF-6) domain) , PF00617 (RasGEF domain) , PF00618 (RasGEF N-terminal motif) contains similarity to Interpro domains IPR008937 (Ras guanine nucleotide exchange factor), IPR001895 (Guanine-nucleotide dissociation stimulator CDC25), IPR000159 (Ras-association), IPR000595 (Cyclic nucleotide-binding domain), IPR001478 (PDZ/DHR/GLGF), IPR019804 (Ras guanine-nucleotide exchange factor, conserved site), IPR000651 (Ras-like guanine nucleotide exchange factor, N-terminal)" /note="Predicted" /db_xref="GOA:A8WUZ2" /db_xref="InterPro:IPR000159" /db_xref="InterPro:IPR000595" /db_xref="InterPro:IPR000651" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR001895" /db_xref="InterPro:IPR008937" /db_xref="InterPro:IPR014710" /db_xref="InterPro:IPR018490" /db_xref="InterPro:IPR019804" /db_xref="InterPro:IPR023578" /db_xref="InterPro:IPR029071" /db_xref="InterPro:IPR036034" /db_xref="UniProtKB/TrEMBL:A8WUZ2" /protein_id="CAP24303.2" /translation="MDPRKPRQDPVNDARFYESLIKPPHLRTPDDIRNVYEQLRQLDT FSNLFIGPLKALCKTARYERHPAQYILFRDGDVARSWYILLSGSVFIENQIYMPYGCF GKRNGQNHRRTHNCLLLQESEMIVIDYPTESQSNRMSPRTHPRVISTGEPVHQQTPRK SAPNMSLDSIAMPPPPVPPRPLRLPPTAAKGPAPLPPRGLPRTYPLDFPVDIPTTSSS SSTASYNDQHRSQVYLNGLSADDDTLVRVKHRREKSNSVGGPGQNGISAARRLRGRST ASSTTTEGETASNEGADSDEEEGSMPSQESSNGGFIDLRDSVRECLEKEPSERNSEDL AVLLDFMQHMSAFAALPMSIKRQLCLKMVFAVVNDAGTPVLKHNEPLDSWSVIVNGCV EVVRPNGERVEYKLGDSFGAEPTTATQHHVGEMRTLVDDCEFVLVEHRDFCAIMSTIG EHIEKDRDGITGEVLQEIEKRTIGSQSGQVLIKGKPDKLIQHLVDDREHNVDPHYVDD FLLTYRVFIRDPTTIFEKLMLWFAESVYRDKVARLVLLWVNNHFNDFETNDEMWNLLE RFEGALERDGMHSQLSLLNIACSVKAKPRQVVLTRKKDDRMMMRLVGGQETGNSVFVA EVYPETSAAREGVKRADEMLEINQQSAKYLSGKKAEDLLTGSLSLTLMLKNNVLGYKE TIGKIEHNKPKNGTARSAAGIPMVIPVHKTSISGKKSSTSSSKSGMMEKLMTILKSSK EDSMDFTDEARISSTDLRPSRSNPDITSISQYYGPVRSECPEHVLKIYRNDQTFKYLP VYKETSAQNVVQLALQEFNMTAEGSPEWSLCECTVTIDGVIKQRRLPPQMENLAERIA LNSRYYLKSNSRSEPLVPDELAPELLKEAQTQLLNLNAQVIAAQLTLQDFSVFSAIEP TEFIDNLFKLDSKYGSPKLEEFEQLFNREMWWVATEICSERHVQKRAKLIKKFIKVAR YCRDLRNFNSMFAIMSGLDKPAVRRLHSSWERVSSKYTRMLEEIHQLVDPSRNMSKYR QHLAEVAQEPPVVPIYPVIKKDLTFAHDGNPTYSEKLVNFEKLRLIAKSIRGVMKLSS APYEIASMAERSGGIVIDALLHMNSFENSNVATMRKGISGKQNQPRKKVYEQALMVRK VKSYLEGLHVVDNEMELDAMSYDIEPQVQTAHRGMGSSSTANIRRVPSPTPSSLSSQS TGSADQSSRQRLLFNGNGSISSAGGGAKFGLLHLLPLSVIVCFTFSGAPPPVTSPSTS ARSSLQRNMPRVTGRQATSSTPAQGPVQLNEETSTVTTYYQSDNGRRQRSGSEGRFDN IPSSTFYLTPGGVTVSPRQSLSVVIPTHPHGHSTTSPRRRSRSPASSGGSSLSTIASI AATSMAAAPSAFVSGPYHHHQTVRGHVIGHRPMPIVTSGSATLPSHVSPRGLPPKSRP TILPGSSHATSSSSRMGTIKEATFLTSEQVSRV" CDS complement(join(409073..409163,409212..409475, 409520..410597,410648..411152,411209..411277)) /gene="Cbr-pps-1" /locus_tag="CBG_03405" /standard_name="CBG03405" /product="Protein CBR-PPS-1" /note="C. briggsae CBR-PPS-1 protein; contains similarity to Pfam domains PF01747 (ATP-sulfurylase) , PF01583 (Adenylylsulphate kinase) contains similarity to Interpro domains IPR002891 (Adenylylsulphate kinase, C-terminal), IPR002650 (Sulphate adenylyltransferase)" /note="Predicted" /db_xref="GOA:A8WUZ3" /db_xref="InterPro:IPR002650" /db_xref="InterPro:IPR002891" /db_xref="InterPro:IPR014729" /db_xref="InterPro:IPR015947" /db_xref="InterPro:IPR024951" /db_xref="InterPro:IPR025980" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8WUZ3" /protein_id="CAP24304.2" /translation="MLTQRDENNEGDTMPILKKPRYSSLSGQSTNITYQEHTISREER AAAVGKHEGFRGCTIWFTGLSGAGKTTISFALERTLNKVTDRIFTEFNSCDNFQLGIP CYGLDGDNIRHGLCKNLGFSKEDRQENIRRVAEVAKLFADSGMICLAAFISPFQEDRL DARKIHESENVKYIEVHVNTSLEVCEQRDPKQLYKKARAGQIRGFTGIDSAYEPPENA EIVLDAGKDGVQECVQKVLDYLESVGLLPEQIPEVPPVRELFVNDDLAVAELLKESQD MKFVELSKVDLQWLQVLAEGWATPLTGFMRERQYLQCMHFGQLLDLKNKVAFVGEKDD GKEDSWPLMEEINQSIPIVLPISDEIKASLDGVKRIALKYNGQIFAILSDPEIFEHRK DERVCRQFGTNDPRHPAVAQVLESGNWLLGGDVAVVQKIQFNDGLDKYRKTPNELRAI FQEKNADAVFAFQLRNPIHNGHALLMRDTREKLLAKHKNPILLLHPLGGWTKDDDVPL DVRIKQHEAVIAERVLDSEWTVLSIFPSPMMYAGPTEVQWHARSRIAAGIQHYIVGRD PAGIQKPGSPDALYETTHGAKVLSMAPGLSALHILPFRVAAYDKTSKKMTFFDPSRKE DFENISGTKMRGLARSGETPPDGFMAPTAWEVLASYYKSLQNSN" CDS complement(join(413345..413497,415639..415741, 415793..415857,415941..416066)) /gene="Cbr-ttr-53" /locus_tag="CBG_03406" /standard_name="CBG03406" /product="Protein CBR-TTR-53" /note="C. briggsae CBR-TTR-53 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)" /note="Predicted" /db_xref="GOA:A8WUZ4" /db_xref="InterPro:IPR001534" /db_xref="InterPro:IPR038479" /db_xref="UniProtKB/TrEMBL:A8WUZ4" /protein_id="CAP24305.2" /translation="MLKHLIYLCISIFPLSLAGRECVWVLGKVECQSDPTKNLNVEVR VWDRDGPGPLQMIDPDDLMGVTFSNDDGRFQLDGCGDDFDWIPGIKNVPEPYIEIRHY CNSEKGDIFQLPEFSTFVPNTYDIGTIVLDKETRGTKTTQKTDPTQ" assembly_gap 414378..414524 /estimated_length=147 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(417157..417250,417303..417469, 417518..417676)) /gene="Cbr-ttr-54" /locus_tag="CBG_03407" /standard_name="CBG03407" /product="Protein CBR-TTR-54" /note="C. briggsae CBR-TTR-54 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)" /note="Predicted" /db_xref="GOA:A8WUZ5" /db_xref="InterPro:IPR001534" /db_xref="InterPro:IPR038479" /db_xref="UniProtKB/TrEMBL:A8WUZ5" /protein_id="CAP24306.1" /translation="MRIFLTKVSFFFSLVLLCSAANNCAWFVGKLHCSDPTKLENVVV EIWDKDRSFFPLTLFVDDDLAGRTITSAEDNGTFKVEGCASDVDFLFVKNEPEFYLKI RHYCKGRAEVTYAHPRNMKVFVPETNDYFTKHPIILG" CDS complement(join(418426..418474,418521..418849, 418894..419163,419210..420344,420391..420498, 420546..421281,421617..421644)) /gene="CBG03408" /locus_tag="CBG_03408" /standard_name="CBG03408" /product="Protein CBG03408" /note="contains similarity to Pfam domain PF01602 Adaptin N terminal region contains similarity to Interpro domains IPR002553 (Clathrin/coatomer adaptor, adaptin-like, N-terminal), IPR017106 (Coatomer gamma subunit)" /note="Predicted" /db_xref="GOA:A8WUZ6" /db_xref="InterPro:IPR002553" /db_xref="InterPro:IPR009028" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR012295" /db_xref="InterPro:IPR013040" /db_xref="InterPro:IPR013041" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR017106" /db_xref="InterPro:IPR032154" /db_xref="InterPro:IPR037067" /db_xref="UniProtKB/TrEMBL:A8WUZ6" /protein_id="CAP24307.2" /translation="MSGAPKTKGAQSSRMKTNKKDEESGGNVYAHLDKTSVLQECRAF NETPINIKKCTHSLTKLIYIIQQGEPIGRTEATEAFFGVTKLWQSKDVNLRRMIYLAV KELAEVSDDVIIVTSSLTKDMTGREDLYRAAAIRALCKITDTGMLQTIERYMKQAIVD RNSAISSSAIASSIHLMRKSSEVVRRWANEVQEAVSSDNHMVQYHSLALLYQIRANDR LAVNKLVQKFSKNALRSPYAVCYLIRIATRCLVDDDQPDSSVFTFIESCLRHKSEMVV YEAARAIVSLPQTTPSEIQPAITALQMCCTSPKAAVRFAAVRTLNKVAMAHPNAVMSC NVDLEKFITDSNRSIATLAITTLLKTGAESSVERLMQQISGFVNEISDEFKIVVVDAI RSLCSRYPRKHTVMMPFLAKMLRNDGSYDYKKAIVETIIAIIEENPDAKVAGLAHLCE FIEDCEHDNLSTRVLHLLGREAPKTPNPSSYIRFIYNRVILESTKVRAAAVTALAKFG AQCSDLRPSIQVLLKRCLLDSDDEVRDRATFYLKMLTEASESLIHNFILDGLQVSPSG LELKILDYLRSQTYSSPFDLRTVPVTQQALSQPEKRVPQLVEEEEKPKAPKVEPYAAQ LAAIPQFAALGPVFKSSARIALTESIAEYTVHMIKHTFANAMVLQFECKNTMNDQLLL DVSVELEDPDGEWETKDTIIIEKLPYGEVHSAYSLLEFPDSGAIAGSLGAILKFKVMD VDPTSGEPDSDDTYDQTYVLEEVDVNVSDSVQSVAKTAFASAWEALGDDATREETFQL STVENIPDAVKKVSEILGLVPCERSDRVPEGKTQHTVYLSGVFRGGYDVLSKATVAID PSDNSIAMNIIIKSNEPLVSDLVISAVV" CDS join(423133..423192,423239..423335,423383..424074, 424120..424197) /gene="Cbr-tsp-12" /locus_tag="CBG_03409" /standard_name="CBG03409" /product="Protein CBR-TSP-12" /note="C. briggsae CBR-TSP-12 protein; contains similarity to Pfam domain PF00335 Tetraspanin family contains similarity to Interpro domains IPR018499 (Tetraspanin), IPR000301 (Tetraspanin, subgroup)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WUZ7" /db_xref="InterPro:IPR000301" /db_xref="InterPro:IPR008952" /db_xref="InterPro:IPR018499" /db_xref="UniProtKB/TrEMBL:A8WUZ7" /protein_id="CAP24308.2" /translation="MANRRQPVPQRAQQRVYRQSQIRYAPGAGGESEISCCVKYSVFS FNVIFFLLGFGLLLFGVWAQIEKDTFVNLLSKASKLYLDPTWPLLIVGFLTFTIGFSG CVGSLRENTSFLTFYSTLLGLLLIAEISAGVFAYACRDQLDNYIRNLLNDVVVGYRDD PDLQLLIDSMQETWMCCGINGADDWDRNTYFSIEAREVASPEAGGVPFSCCINSSKLE FKNYFCGHGVRLKPESHMAAHLAAQRVMAHTSSIYTEGCLPKLQLWLNNNMLLVAVSM VIIAIIQVLGICFAQNLKSDILAQRAKWYYTH" CDS join(424770..425354,425400..425866,425916..426336, 426679..426780,426826..427179) /gene="Cbr-hpo-5" /locus_tag="CBG_03410" /standard_name="CBG03410" /product="Protein CBR-HPO-5" /note="C. briggsae CBR-HPO-5 protein ;" /note="Predicted" /db_xref="GOA:A8WUZ8" /db_xref="InterPro:IPR019540" /db_xref="UniProtKB/TrEMBL:A8WUZ8" /protein_id="CAP24309.2" /translation="MPMWYLTTSTYRAPFPTFPANRSITVEVRINFAIASDEMGEDVQ KVMPELEYNMTTKEVVAPLDFQWRTRFIGVRKFDDLERDHSLKVEEKEEFFDVFICLV SEKVKLVISKKHINFDFEDWKHYSATRVQLGIGKWNFVQWPEKSEEKAKASSRITELV SDTLIDVPHLNSIVRRDLRQKMQPWQIAALPLSHQKRLVWDSAPLATNYHIQVIHLHE NTEIPTESLEQQKRTAAALRKFAEKVQGVTRVDVSIEHLWDFEPTTQFLAKDVQERWT LTHSAMEELIKKVDAQMQTSLVQGTVLRFVVLETSEPVVVLDETGEDIDGVAVASWGA VLPRNEATESKAIAAMRIQMGMDAELLIGWHRPSVALCQWEVARARLRASVDNAMRAA SAVRALDELAHKISNIAINDDVAGRATRAVNILDEVVRPGKRLDFESLLEARRLADSA NYDHSLLAMLYFPMDQRTAVLIPLAVPIVLPICKLIFEISMEGQRTQVPEGGELVCYR NEENQHLFLKVEYSRETMIKLSSSILCHQRPTGLKQIAEEMPELLGLPHPIPMTASSP ILEHSSNHKINSYHEHSPCHLFSPVRGPVTEADEASRVLSNQRELQKRIQLMTLQEEL TPRRCLIDCFDTSSVLGI" CDS join(428224..428356,428402..428494,428542..428669, 428718..428987) /gene="Cbr-gst-3" /locus_tag="CBG_03411" /standard_name="CBG03411" /product="Protein CBR-GST-3" /note="C. briggsae CBR-GST-3 protein; contains similarity to Pfam domains PF00043 (Glutathione S-transferase, C-terminal domain) , PF02798 (Glutathione S-transferase, N-terminal domain) contains similarity to Interpro domains IPR004046 (Glutathione S-transferase, C-terminal), IPR004045 (Glutathione S-transferase, N-terminal)" /note="Predicted" /db_xref="GOA:A8WUZ9" /db_xref="InterPro:IPR004045" /db_xref="InterPro:IPR004046" /db_xref="InterPro:IPR010987" /db_xref="InterPro:IPR036249" /db_xref="InterPro:IPR036282" /db_xref="InterPro:IPR040079" /db_xref="UniProtKB/TrEMBL:A8WUZ9" /protein_id="CAP24310.1" /translation="MVQYKLTYFNARGLAEICRQLFYLAGVEFIDERLDEEGFAKLKS SLPTGQVPILYIDNVPFSQSTAIARYLARKFGFVGKTAEEELLADSIVDTFKDFIESF RKYVVAALTGKGEEKMKEIRENIMKPAVASYFQYLNKILEKSESGFLVGSQLTWADLV VADNLTTLINAEFMAVGKEKMLAEFREKIIETPKLKEWIDKRPVTRF" CDS complement(join(429246..429361,429413..429587)) /gene="CBG03412" /locus_tag="CBG_03412" /standard_name="CBG03412" /product="Protein CBG03412" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WV00" /protein_id="CAP24311.1" /translation="MIRPRKVQWADDDDVENQKVSSSSNSECLKNKSNYKEIASKKLV QVRNYSGYAESLAIEKIVQASPTQRKTQKFDRNLSTVHEEEDDVSESGEENV" CDS join(431782..431903,431955..432669) /gene="CBG03413" /locus_tag="CBG_03413" /standard_name="CBG03413" /product="Protein CBG03413" /note="contains similarity to Pfam domains PF00651 (BTB/POZ domain) , PF00917 (MATH domain) contains similarity to Interpro domains IPR002083 (MATH), IPR000210 (BTB/POZ-like), IPR013069 (BTB/POZ)" /note="Predicted" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR002083" /db_xref="InterPro:IPR011333" /db_xref="UniProtKB/TrEMBL:A8WV01" /protein_id="CAP24312.2" /translation="MNSKLENGQDIFCGSMKLFTEHFNEIRKSTISYVSILNIPWNMK VSETDKKLTFKLSCNENTANTMWNCKADVEIYVKPILDGKIEYSKIEKVLDDQKTFDY KNKHMEVSIGVDQLGLETETLENYHFEVQTNLRLKRIYGYRKRKVLDYTVEHPRFSNG VIVIDERKIYVNKQILAMHSKYFNNLFFGDFNEKGQSTVQIHEVSYEGFITFLDFIHP TGRRIESSFVEGLMEVADLFMADRVMEYCEEFLIKTEIIEKAQKMIWAEKYSLHNLMV GS" assembly_gap 432975..437131 /estimated_length=4157 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(437457..437841,437884..438444, 438489..438615,438665..438828,438873..438994, 439039..439225,439778..439872)) /gene="Cbr-glt-3" /locus_tag="CBG_03414" /standard_name="CBG03414" /product="Protein CBR-GLT-3" /note="C. briggsae CBR-GLT-3 protein; contains similarity to Pfam domain PF00375 Sodium:dicarboxylate symporter family contains similarity to Interpro domains IPR001991 (Sodium:dicarboxylate symporter), IPR018107 (Sodium:dicarboxylate symporter, conserved site)" /note="Predicted" /db_xref="GOA:A8WV02" /db_xref="InterPro:IPR001991" /db_xref="InterPro:IPR018107" /db_xref="InterPro:IPR036458" /db_xref="UniProtKB/TrEMBL:A8WV02" /protein_id="CAP24313.2" /translation="MGMKKDLLLVLTIESVVLGVVLGFVIRPFNPSNDTISLIGFPGE IFMQIVEMMILPLIMSSVISALAQVRARDARRIGIVTIIYYMTTTFLSTFTGIILVSS IHPGDPELIHELGEGTLENTALSTLDTFLDQIRNMFPENIIQATFQQVQTEYMPIKPA RVRNSTSMNITTEVLHKQTLTYTNEMNVLGLIVFCSGFGIILSILGDQARLMINFFIV LDAIIMRWISALMWCYPIGILSLVCKNIIDIDNLTETAQALAMYVVTVICGLMIHSLL TLPLLYFLVTKKSPFAFMTGMLQALATAFGTASSGATLPVTFRALEENLKIDRRVTRF VLPLGATITMDGTALYEAVAVIFIAQLHNIKLSLMDLVTISITTTVASIGSGSVPAGL DTIVIVLTTVGLPAKDLSLLLTVDWLLDRIRTSVNVLGDSFGAGIIHHLTRSSLLEAD TDELIRQIREDIDILNNPHQDTLPISHHSVQSTIQNTQNSMQVGLRSFFKIFKNFQAP HIYSKSARASFAPVPNEEERKALLKESIALNKSETHIV" CDS complement(join(440135..440289,440335..440569, 440630..440734,440783..440836)) /gene="CBG03415" /locus_tag="CBG_03415" /standard_name="CBG03415" /product="Protein CBG03415" /note="contains similarity to Interpro domain IPR008856 (Translocon-associated beta)" /note="Predicted" /db_xref="GOA:A8WV03" /db_xref="InterPro:IPR008856" /db_xref="UniProtKB/TrEMBL:A8WV03" /protein_id="CAP24314.1" /translation="MKLIILVSAFLATVNASARVLVGKEFISMYPVAQQENVFEYQII NIGDTAAINVDFSDRGSFPTDKFEIVSGSLDAKYAVIPPHSSVSHHIVVVPRVPHAIE DKDVLVDYTDSESKISSRVSTLWFSKGRLTHFFHQDALKHIAGSKYAHFFVFAAIATP VTGLSALLYWVSKSRYTLPKRN" CDS join(441272..441377,441460..441590,441635..441697, 441741..442317,442363..442626,442670..443034) /gene="CBG03416" /locus_tag="CBG_03416" /standard_name="CBG03416" /product="Protein CBG03416" /note="contains similarity to Pfam domains PF02136 (Nuclear transport factor 2 (NTF2) domain) , PF00076 (RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)) contains similarity to Interpro domains IPR002075 (Nuclear transport factor 2), IPR000504 (RNA recognition motif domain)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WV04" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR002075" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR018222" /db_xref="InterPro:IPR032710" /db_xref="InterPro:IPR035979" /db_xref="InterPro:IPR039539" /db_xref="UniProtKB/TrEMBL:A8WV04" /protein_id="CAP24315.1" /translation="MQITSNLTQSKMEPINGNLSASGATVEQAPPAAADLTEVGAAFC HQFYTTVSENRPALTKFFGHESKFYFDEQSVTGAQDIANAYKKLPESTHFKIHSIKGY PTPHKAGVIINVIGTVNFRPFVQSFLLGQQGQKKYFVETDHFQYIDKYFDFKHEQDKA AVSSSGLNGHSNSSNGKVTKPVPKTPEQPKEQSKPAPPKQQTPKKAEDVPRQVKQDTP KTAEKEVVKTPQKQENVQHAPSQQHPRAHPPAQVPVPAPEPVQEQPKVPKTWANLVGG GSKQHPPQQQTYGQGQQVHQQQQMHNMQQAAMHQQQQQAQAAQLYQQQRHAQQSSQHP ANDLRQAQENSDASLNERKIYLGGITREIVPSNTSQAETEIKQLFYKYGEVEEVRMPR KVLDSPNDTSKHAFAFITMRTKAGVQAIFAASTRDEQGTWKLPLKLDAFGFDGHAQIS EQRDQPPGGGFRGGRGNYQRGGGAPFFRRAGPGGAPRGGLRGAGFQNGGQH" CDS join(443617..443681,443728..443819,443870..443941, 443985..444211,444277..444479,444528..444672, 444723..445180,446670..446922,446967..447230, 447276..447539,447587..447802,448519..448782) /gene="CBG03417" /locus_tag="CBG_03417" /standard_name="CBG03417" /product="Protein CBG03417" /note="contains similarity to Pfam domains PF00004 (ATPase family associated with various cellular activities (AAA)) , PF05496 (Holliday junction DNA helicase ruvB N-terminus) contains similarity to Interpro domains IPR003959 (ATPase, AAA-type, core), IPR003593 (ATPase, AAA+ type, core), IPR008824 (DNA helicase, Holliday junction RuvB type, N-terminal)" /note="Predicted" /db_xref="GOA:A8WV05" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR003959" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8WV05" /protein_id="CAP24316.1" /translation="MDDDYNVLSTGFDEDDGALHYPDDEGEQLAVVSNTENQIGQEVR NALEEVGYGTRKRRLNDVEDVFDKYGRRSHPMDWFERSETVSINVLQNSQRNAAKRRA LEVLEQQINETVVEAAKVNVRDDDEGERDGEQTISSLCERELQRRYQRKKEIMKNPPV DGSNWIGLWDVIDGKRFYIRTFRENQTATSLVESITQQATRSRVGYRAFQTICQEAEN IRKTKEANRINEQESEFSQMMNESLPVHSESSLWVNKYEAKNFADLLSDSTVNRNILT WLKMWDECVFQRKVDNLLASLGEREKDVLQMDNGKIRRPSMKMLLLSGPAGLGKSTLA RIVASQAGYATIDVNASDARTVADLNKVLEGAVKTSRTLDGDQRPACLILDEIDGTPI DTIRHLIRCLQATGKKAVRRPIIGICNNLYTPALRDLRGVAWCVQLSATKQDALAKRL EQICDMENLRCDLSTLRKLCDLCANDMRHSINTLQWAAVASNKTKRSITMKLIHEVVE KEKGGAASIFEHWSSILELSKHVDAKGGIKNTRERVFVIERIAAEHGGEERFVSGLHA NYMVSLPIGVIRKASSWFLFYDDMQKIIHSLQNWSVQKYASSFFVSLHLSLATHARVS IAYPQLEQTIYQKSKESEETISDVRSCGHFGRQTQRNELVLDILPYIVKIAQPPIKPM NESLYNQRELSIFNQTVSVMCDYGLTYTATMIKDQINWLFTPAIDVLTMFPLEEPKRP YLANATRQLIAHKITLTRVRLADHTPQQQSERITTNTDKIKEIIDTENQKKKKRLSAG AMKRKEQGKHSDVIFTHQDGDSNAVKKKVTIQQLNSIIFGES" CDS complement(join(445582..445794,445842..446066, 446116..446508)) /gene="CBG03418" /locus_tag="CBG_03418" /standard_name="CBG03418" /product="Protein CBG03418" /note="contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF)" /note="Predicted" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR036034" /db_xref="InterPro:IPR040264" /db_xref="UniProtKB/TrEMBL:A8WV06" /protein_id="CAP24317.1" /translation="MGSEKMIEVKIDMEEGEPLGATPNDKLVITKIQSGTISEGKLRV GDQVKKVNDVECKDANDFFRALRYATPLARILVNRDEKKAEELEARVHIPEDRAKIIQ RREGYVYEMATLVWVQNGPKLGLGIKHYQNRVLVSRVDPGSLAEKCLVLGDHLCDVDG IPVTDKDVARDLLVKNLQEKGKVSFVVERPDSFEAKQWAKQALAANILQPPSVQMNDD VRTIASKYRAALKALKAPGKSAMTTAGATGGKKVQIIEETATHEIGHDHEGKALRKVK " CDS join(449174..449468,449511..449912,450494..450709, 450753..450909,451231..451331,451381..451617, 451662..451678) /gene="CBG26393" /locus_tag="CBG_26393" /standard_name="CBG26393" /product="Protein CBG26393" /note="contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)" /note="Predicted" /db_xref="InterPro:IPR000494" /db_xref="InterPro:IPR036941" /db_xref="UniProtKB/TrEMBL:B6IFF2" /protein_id="CAR98632.1" /translation="MLRLGQFLLLFNLISNIFSSENCNFNVHYLTSSSQFPSNCSQLI GRFRIDQNTDLTSDQLVKLFENVQEIRGVLQIWNSQLTFVSFTKNIKSITGDPLENVL SIVNNTKMTAVNLSSLLYSNGKLEIRNNQNLNLQKTCSAIHDVYFNYRVITGNSFDCG CEIHGIFKWPQVASFPENCIVLYGDLVLEEAPPPFKVLYRLSSLTKLYGFLRVRNTNL ETLGFLQNLEAIESGPEAEYTIHIESNHYLRRLDLIKLQSIKSRNTDSIVRIDDEFCV DPAFVQLLAQSKMKEIQDYHVKTFCEADKINNPSIYCRGKLSAVNDRCNRYIGDILYI NNDISDYNDIQNYTKVPAADIRKIQQFEMVFGSILIEGSTLKNVSLPNLREIYQVSDA SYDIGYGFKNSVGYKAVMKFRRNDFLENISFPNLNVAYQNMYFLHNANLTKDETLCQT LANQIANVSVIGIDAEYDCRSYLP" CDS join(452378..452654,452702..452895,452944..453021) /gene="Cbr-ttr-39" /locus_tag="CBG_03419" /standard_name="CBG03419" /product="Protein CBR-TTR-39" /note="C. briggsae CBR-TTR-39 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)" /note="Predicted" /db_xref="GOA:A8WV07" /db_xref="InterPro:IPR001534" /db_xref="InterPro:IPR038479" /db_xref="UniProtKB/TrEMBL:A8WV07" /protein_id="CAP24318.1" /translation="MNSLIYIFLIPIVFCVKQDDLNRDDNSTELHEEGSAQVGANENL TIPHKVPSRFIDKVRAIGRKQAIGVKGTLMCGGRPVRNATVKLWDNDFFDPDDLIGEA HVYENGTFQVSGFVISITSIDPQLRIYHNCRSSSKGCRRKITFTVPDNYINKGEKVQK WFDLGAPNMEIGVKHKEEKHCY" CDS 453547..454446 /gene="Cbr-col-2" /locus_tag="CBG_03420" /standard_name="CBG03420" /product="Protein CBR-COL-2" /note="C. briggsae CBR-COL-2 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain) , PF01391 (Collagen triple helix repeat (20 copies)) contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /note="Predicted" /db_xref="GOA:A8WV08" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/TrEMBL:A8WV08" /protein_id="CAP24319.1" /translation="MDIDARIKAYKFVAYSAVTFSVVAVVSVFITLPMVYNYVNNVKK QIHTDVNFCKVSARDIWSEVHLIKDAPSNNTRVARQAYNTGGAGGGGGGGGCDGCCNP GPPGPGGSPGKPGRPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAG PPGPPGEDGAPGSPAGPSSPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEP GPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGPAGAPGADGNPGGPGTAGKPGGEGE KGICPKYCAIDGGVFFEDGTRRR" CDS join(455003..455037,455084..455204,455248..455613, 455659..456066,456115..456399,456442..456509, 456954..457125) /gene="CBG03421" /locus_tag="CBG_03421" /standard_name="CBG03421" /product="Protein CBG03421" /note="contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domain IPR011701 (Major facilitator superfamily)" /note="Predicted" /db_xref="GOA:A8WV09" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8WV09" /protein_id="CAP24320.2" /translation="MTAPVKKISVREKELSERKTPWASVYVIAFLLLLTGIQMSIYFT STWQYLSENDESVTVDFFGVLLALQALSSAFANPLFGYWNQISTSTRKPVFCACAIAG FGNLLYAFAYLAPPYVKWVMLFSRILTGFSPGALGVLRSFIGTASTQEDRMKAVSITN AGFTAGFFLGPTIQICFIPLGKYGFNIGPFIINMYTSAALFMTIISAISIILTYFFLE ENYVGIISEEEKSQDPYFVLPKFDRLPVLLLFYMWWLMCGVVCVESMAAPVTIAMYNW SREDAVLYNGIIQTVSCVFTFIVNFSLAATKLKTVDNRLLLLAGLGFFKLFFVLHMPL PFYTGPLDRLGTLNSTISEIGRCEFDWCDDTPRVPLPLYLLISSAIIGLGFPLISSTS SSLLSQIIGPRKQGTVQGFFAFTGAFSQFVVSLFSTRLFELSGYKWIMVYHWTIVTVA IISTLLLWRRLVPLKITPSHGEATRYKLGTFYRM" CDS complement(join(457423..457588,457893..458053, 458102..458237,458284..458669,458995..459148, 459201..459280)) /gene="Cbr-cwn-2" /locus_tag="CBG_03422" /standard_name="CBG03422" /product="Protein CBR-CWN-2" /note="C. briggsae CBR-CWN-2 protein; contains similarity to Interpro domains IPR005817 (Wnt), IPR018161 (Secreted growth factor Wnt protein, conserved site)" /note="Predicted" /db_xref="GOA:A8WV10" /db_xref="InterPro:IPR005817" /db_xref="InterPro:IPR018161" /db_xref="UniProtKB/TrEMBL:A8WV10" /protein_id="CAP24321.1" /translation="MIPRRINWILILLNLSQIQSLLDASWWSTVAQLSTALAGHNVKP VCELPGLSPGQAQVCELFKDHMPAVSIGAQNAIQECQRQFTGHRWNCSTHYSTGMLGP IHKMATREAAFTYAILSAGVTHEIGRRCKQGLLTSCGCSDETKPKNVPTDWSWGGCGD NVEYGYKFSRDFIDIREKEHDPKRNHDNGRSLMNRRNNEAGRKILKRHRKPKCKCHGV SGACNMKTCWMQLPSMEQVGKILRNKYDKAIRVQINDRGNLQLLADETSKERKTRALP TDLVFMDDSPDYCRFDRHSGTLGTEGRVCKRGSSGAEGCDSLCCGRGYNTYTQEVKSK CNCKFEWCCKVVCQTCNNMTQVDICK" assembly_gap 467648..468131 /estimated_length=484 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(470398..470541,470728..471043,471436..471965, 472012..472338,472385..472483) /gene="CBG03423" /locus_tag="CBG_03423" /standard_name="CBG03423" /product="Protein CBG03423" /note="contains similarity to Pfam domain PF01734 Patatin-like phospholipase contains similarity to Interpro domain IPR002641 (Patatin/Phospholipase A2-related)" /note="Predicted" /db_xref="GOA:A8WV11" /db_xref="InterPro:IPR002641" /db_xref="InterPro:IPR016035" /db_xref="UniProtKB/TrEMBL:A8WV11" /protein_id="CAP24322.2" /translation="MPSNRCAHQMSAKKKAERVDSMITFLKSAVQSQKEKSVQPDQAP GNAMMTAKLLELWSVPQSTITEMRLLLTLGADPAPLLKDDIGEKILADRMDNGSVCEE CASKFKAFLEFSGTIFEEMFERTPIQINKSKKVDGVMALCLDGGGMRGLVSVVCLLYA SRRLLGDESLPNLFDWFIGTSTGSMLALSMVNKKSISECFFQYWDMKSQIFLRGSTVK RLLGDQVAVQTKNIDKVLEECFPTETLQACSTRLTIPALDISTAPARLHIFRNYSFTK PFGVSLNEDQDILFREAARASSAAPTYFEPFVYGTKVLVDGSFVANYPLNVLFKEYDS FSRHQNPLHLAGVLSIGTGEPALAERKYKSGKSIKAKAMNIGHLSTLILEQVVGQDLT AVEMAQERCHAHNIPFNRLSPKGIAVRIDQIDDAKLMEMIWTTLMYLTENVHEIDQLG EMIYKLKSDPTERKRRSNTVL" CDS complement(join(473512..473577,473622..473681, 473733..473991,474039..474124,474592..475053, 475098..475235,475280..475399)) /gene="CBG03424" /locus_tag="CBG_03424" /standard_name="CBG03424" /product="Protein CBG03424" /note="contains similarity to Pfam domain PF01457 Leishmanolysin contains similarity to Interpro domain IPR001577 (Peptidase M8, leishmanolysin)" /note="Predicted" /db_xref="GOA:A8WV12" /db_xref="InterPro:IPR001577" /db_xref="UniProtKB/TrEMBL:A8WV12" /protein_id="CAP24323.2" /translation="MQIRCLLIPLLLASAISCTTRRGLKIVAVNKDGTFPDRIQKSLE SALKWFENAILIEDKNSKLTFAKIKQVIGYTLADNVGKVTIQTPNKLFSLDIESPDFE ELFDASDMLIFIREKQCAPSSRPSATGSHMKNSYETFSKRGMMQWCYHEEDPEFPYFD LIRHEILHILGFGTENFDAPQIENYQWKNEDNTVSQAKRYFFKTKGSTALDEVKKHFG CDNLKGVESDIHARHLNEYIFHNELMTPFIQNGKNYLSWISVALIENIYGGQVYHVDK KFVAAEADSYSFGKGFGCSWLTKSCHEFLEERTDSSRPVPFCPKEDNNALTIKCFKTA PTTAHLLNCREKMNVAVDNGILFPANSKYQNPFTRFCPIYTDYQRMLSEYPLSDCNKS EYPE" CDS join(477580..477697,479107..479217,479463..479579, 480385..480479,480526..480672,480724..481038, 481084..481206,481274..481351,481398..481526) /gene="CBG03425" /locus_tag="CBG_03425" /standard_name="CBG03425" /product="Protein CBG03425" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WV13" /protein_id="CAP24324.1" /translation="MSRVFLEEADRPPPAYYQNNNLDEQKPLKIVPFQTPDPEKWISA PEFVPRSKQLADAFGFPTPDFDNQNPPESVPFDPNYYEYSLQNHFIPQAMPVPTPFNG IPPGYTANMTTINPGNGPPIAAILLRKKRKRRSKHSTNSMVNTHSTSPCSSHPSDPNG DISSCDEFQKNSDAENFSGSCPDLTTQQIQKWDDYLYETAKNVNENGILHESTGERTS EDLSSSVYECAAPGILETAAQTISGTSNKELQKLDQEINGNVMTSSMVLRKLANHHTY ISDGCTEKTLEQEMNELTFRKPVVPQRYGYPQIDNNVSPYVHLATIDPKKKKIKNHLI DKDALKAYLDEEAEEEEDFLEGLNITVNNFDTCEDLSLSDVEQPSRFQQFQEAIRKNT VVIATDLQAPDRQCCTIM" assembly_gap 478148..478240 /estimated_length=93 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(481599..481644,481693..481746, 481834..481926,482713..482897,482944..483067, 483123..483259,483307..483386,483427..483613, 483753..483833)) /gene="Cbr-srv-12" /locus_tag="CBG_03427" /standard_name="CBG03427" /product="Protein CBR-SRV-12" /note="C. briggsae CBR-SRV-12 protein; contains similarity to Pfam domain PF10323 Serpentine type 7TM GPCR chemoreceptor Srv contains similarity to Interpro domain IPR019426 (7TM GPCR, serpentine receptor class v (Srv))" /note="Predicted" /db_xref="GOA:A8WV15" /db_xref="InterPro:IPR019426" /db_xref="UniProtKB/TrEMBL:A8WV15" /protein_id="CAP24326.2" /translation="MTSLSSEFWNLEMADINYTRTAEDEKLQLLELIFASLFNFGIKS NDLFSGTLLTNYLGAMFPKWGMFVPVYMFLGKGYAHVYLYFAWSTGICQAMGVSILAA NRLSVMLFPTKFHLMWQGYCIWVAISIQYLSGLSVGLATFFNPTQLFRNEQNGIVPKF LNVTMTNTFFVIGGVFLFANCLFLVLTYCYLFAVLHKRHKNTLSQPVRYQSKRKEKTK IREAKLFTMSTITVGVQMSVLLLFIFGGSDILGFSTDQFYMVYNALSEQREAHSQTES VGFDINPAMSPVFAKGATESNFDVNVFEEPKEELSWWNVRILCGGGSSTTSL" CDS join(485125..485199,485250..485297,485345..485476, 485522..485638) /gene="CBG26394" /locus_tag="CBG_26394" /standard_name="CBG26394" /product="Protein CBG26394" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IFF3" /protein_id="CAR98633.1" /translation="MAAEDIARSRKDLEVLLKQICDTKNIKQGNNDNGEYAEQMDNRM ALFKKVINFALNMQESDQSYAIRVFTFDFLETMVPRLENARYSDQDFCEELNDVELKL RQLISTWKPEALEADIIQEMR" CDS join(485972..486100,486145..486387,486437..486727, 487483..487617,487779..488021,488070..488282) /gene="CBG03429" /locus_tag="CBG_03429" /standard_name="CBG03429" /product="Protein CBG03429" /note="contains similarity to Pfam domain PF00106 short chain dehydrogenase contains similarity to Interpro domains IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR)" /note="Predicted" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8WV16" /protein_id="CAP24327.1" /translation="MAPKTVFIAGANRGIGLGIVKELLKVPGIETINAGARNVETAKE LQSFSQADSRLHLISVDVSEDESLENSVKQVEGLVGDRGLNLLINNAGILEHYRTTDP PNRATVLRTIDVNAVSALLASQYFLPLLKKAAEQTQGDEFSVSRAGIVNIGSDCSSQT LNVTGFCNETLLAYKMSKTAMLSFARSLVADFKTLNVPVLVTTIHPGRVLTDMGGPHA EITISMPPKTVFITGANRGIGFGIVRELLKVSGIETIIAGARNVEAAKELQSFSQADS RLHLISVDVSEDESLENSVKQVEGLVGDRGLNLLINNAGILEHYRTTDPPNRATVLRT IDVNAVGPLMASQYFLPLLKKAAELTQGDELSVSKAAIVNIGSDCSSQTLNVPGFNEY THTAYKMSKAAMLSFARSLLPISSH" CDS complement(join(489542..489680,489724..489920, 489965..490050,490097..490217,490263..490361, 490410..490510,490776..491062,491300..491614, 492370..492401)) /gene="CBG03430" /locus_tag="CBG_03430" /standard_name="CBG03430" /product="Protein CBG03430" /note="contains similarity to Pfam domain PF01733 Nucleoside transporter contains similarity to Interpro domain IPR002259 (Delayed-early response protein/equilibrative nucleoside transporter)" /note="Predicted" /db_xref="GOA:A8WV17" /db_xref="InterPro:IPR002259" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8WV17" /protein_id="CAP24328.2" /translation="MDQMEMKPLNSTMIDETSEESSVNNSESGLVTPRDTWGRKVSKP IDRWYLVYIIFTMHGMGMLMSWNMFITIAPQYYHDYWFNNTNYQDSFMSIIGVTSQIP NVGIMILNTIVVMVGFMMLRVVIPLIVNCFLIAVIVIMAIFVTPSPNTVTWFYIVTLV IIMAMNLANGIYQNSVYGIVADFPDNYINSLVIGNNLCGVFTSVLSIMTILISPNDIE LNALLYFSISLAFMIVCLCSLYFLVRLPFYQYYMAKGVEARSEDSVDNPSLRQYWECF RMCWVQLFNNFYVYFVSLLIFPAMMTDSVYSDPAHNKTSVFGDNLFYPITTFLNFNLF AWIGSSLANYVQFPSAKYLWIGVVLRTIFIPYYLFCNYRPDTRLWPVLFENEWWFTTG CTIMALTCGYMSSLALIYTPVEVPARYQKLSGMLASIFLMLGILAGVASTPIAAWAVE NIGTKKHK" CDS complement(join(493111..495890,496060..496147, 496601..496651,497472..497592,497639..497697)) /gene="CBG03431" /locus_tag="CBG_03431" /standard_name="CBG03431" /product="Protein CBG03431" /note="contains similarity to Interpro domain IPR001412 (Aminoacyl-tRNA synthetase, class I, conserved site)" /note="Predicted" /db_xref="GOA:A8WV18" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR041679" /db_xref="UniProtKB/TrEMBL:A8WV18" /protein_id="CAP24329.1" /translation="MNGNQNGRSAASQNNNHQHRGDPRTTPTFSQRHLNCPTFVPRQR TEEHNNREPIEILVGEFGIVLWESVHSQKLIKILKTFLYLGQEPRLIGSKFKVWMVLY SSVHGERTLRKMLAVETKTHPFTPYYPDIRKSSEEYNLALNIKALLDNYTHHKALRFI AKTHVWNLRPPPFAQLPFAPYGMDAVRQFIKMDGDHAIYRVIADKGDKYILLACHLNV HAFHRGDLRFLEVNSRTRTNASEYSCIGYLALGDLVAVSELAKQPWIPREMGCWKTSD MNQESPCVWMVVRMTVLMRQRFDNVPFVFLNNGAAVALKWREPLTVKTGYNGNLENRG TFVFVGSGFIAMQVPELASGHSKMQETQLLGLSKEITRYPWSTGTIFHYEFSPHFTNQ MHIGHCAYSIANPDPNGVVEFCALMGASASYAVLTGNFDCRSFKMINPQKLEEVVTFK IENISDPKPESLWKQNTRISIGCSRRDAHAVIENVIPLGDMLYISARLSREFAFEFTD EVHMVSQREMPDGKGLVEGFVDKMEHGSNGARILTALYGGPCLPQEQHLFGVHYEFPG ANPIRLNVDQNEYVNSIIRKVPITIANSPFGCGKSMTIATAAYYSVLRYRTVERDLHQ QLLVTQSNFASVNLVDITNRFSDLCTVVRYVSLSSWMELPDESRTELDFPVQMQKYFI PYVTGEKEINDTMLMIEMAKYLKEYQFLKVEEMDPVCQHFFSNCPVVERLDLERLSEF FFESFNPEIVITTADSLQSVIPFLSKGIDTVQFDEASQMPESALIEVISNFPYADFGL VGDIQQLPPYCDTLLTTNLKRFGIGNTLERAIKNRLFPQFVLRNVYRCHPFITAMLGD LFYGGRLVTNVKPNERDEFMRSRPDFWPNHECPIMVRHNGTPSTRYHTSMFNHVEALM VSSIIDQIFSHPNCTIQPKDIGIISFYKAQTTRLLETIKNKDIKIGTVDSFQGMERQV MILCCTNEMISGFLANPNRINVSMSRAKQATIIIGNVNSLRNAQYWRRFVMEADRYGC LL" CDS join(499699..499787,500012..500164,500450..500606, 500649..500819,500866..501066,501285..501400, 501444..501558) /gene="CBG03432" /locus_tag="CBG_03432" /standard_name="CBG03432" /product="Protein CBG03432" /note="Predicted" /db_xref="GOA:A8WV19" /db_xref="UniProtKB/TrEMBL:A8WV19" /protein_id="CAP24330.2" /translation="MLIPLIIVLSVIRQASTLVTCSRCETGTEECNYSRSTCRGDFCY HAQYYYGSETMSTIQKGCVIGEVAPEGCRVNHHGNVIADYCNSNFTSISEIATTILPV QTCQPEKLNNMPKPRWTKPCAANYCTYIAAKTLMEVDNANYTWSTKDCSLENEFDFFP TLTVFNFYPGTCVWLNYGGQPDTHACYGSDSLDSTLVFDTTTATTECHVDYFNPRLPY TKSSGSCLGQFCFISATSRGEVFRGCVNSQTVEGATPLKIGYTRAYTGLEQWICSKSY CNADLKSAELSWPPELYLYRNISNLREFNVFYIDAASSSSIFLAIPLVFLINYCLFH" CDS complement(join(501696..501764,501810..501905, 501950..503133,503181..503468,503506..503541, 503564..503712,503760..503998,504047..504625, 504673..504918,505086..505263,505312..505592)) /gene="CBG03433" /locus_tag="CBG_03433" /standard_name="CBG03433" /product="Protein CBG03433" /note="contains similarity to Pfam domain PF00595 PDZ domain (Also known as DHR or GLGF) contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF)" /note="Predicted" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR008144" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR035537" /db_xref="InterPro:IPR036034" /db_xref="UniProtKB/TrEMBL:A8WV20" /protein_id="CAP24331.2" /translation="MVEVDGKPSLSVEEDENENEEKYENEEKEKLVKQLRLEKSERKR IEEEMEKEIREVEGKWMEKVRKATEERDEIARKIDEFEEKIDSMQIQVHRSETYKMEI EEANKRLRLQYEALQRDYEETMQERSIVLEENSRQLEERERLQKQIEKMKEESEEVAA LKKKLENTRRLLQVNVEETVTANARRDAALARLSEVEQNGIRLAEERDEALMRCKQTS VDAIVDIWNTHSVQVNLPFNKPNLGIMLGGGRTDDGSIVHGPIYVRHIAHGSPFENLL KKLDHIMMVNDISVTDMDERSVMGMLSNSHHIHLVIRRRSNCNKISDVCLPLNYGECL VDSFFSISEIPGVGLELANGVFINSCEPNGAASRSGLAPGQRVVHVMHTPVYDAKHAE LLIKNAREPLVIGILQSTKRGDQNGKDKSRPTIFSRWFSRNGGADKERTVVAKANIDR SNDQVLLRQGSLRMPQASPASVSPLVRYGSLRAPTYSNSVADHSKLMLDTLDKRFNGA STAHLEISSSSTAAPSVPWSPSSVNEKSLVFAGTNIEGVPVYVPKNTIFSKLPELVFL LSKKTNNVPNIIGTPGERVGWASFSSNTTTSDARPYSMHFTPTSSTIMEGKPHRRSQV YSPSHPPAYPTIRDDSLSSVMSSSNSIRLPSTSFSNQYPNNSACSLTGGNSAPPRHCI SKDGSDFSISTTGSAMHSYAEGGRSTKKYPHMPRGNHHSESLLVNRSSQPRLVEVPRC DVKLCGGNAIGILAEKSLGSELLEGDLILSIDGNCVRNTTLECAINTLLADDTELTSL LVQDGGDRLNRLRLGADGDSFFLRVNIDRPMENKDELELKCGDVVFVDNTWILGKTGR WMAWKVDKEGRQRDHGAIPSSTTVYQAIRANKYANPFPKKAYEWVEKLDTKVKRPVLL FGAVVEPFLQMLVDESDKFSIVARESLTASFDEVSALLKDKVVIDSKQNDDVYDLYHV ISTAHIMDITAQGLVLFQRRTPLNYGNYSRLHCVLQVDQTAIDRLKRCRMFPILVKIR FKSVKQLKDVNEHICGEKISSKEAKQLIEKDLKIEKDLDGSVTLVVPSHNNVSFMMTH AVLQLKKLIEEEQKKIVWVQRKIDEE" CDS join(509662..509901,509947..510063) /gene="CBG03434" /locus_tag="CBG_03434" /standard_name="CBG03434" /product="Protein CBG03434" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WV21" /protein_id="CAP24332.1" /translation="MDRLLALYSQQNTHSTPAEMCRNYLLDLLKSGEEGSIQWRNLDA LEFEITDEMDLKRRFYVRTGKDFSRVLNEGTRFFRKVHGLDNVYRFHFVPRHLRPLIP NKKFAQRLMFSTETAV" CDS complement(join(510248..510349,510394..510498, 510548..511597,511717..511886,511935..511971)) /gene="Cbr-sars-1" /locus_tag="CBG_03435" /standard_name="CBG03435" /product="Protein CBR-SARS-1" /note="C. briggsae CBR-SARS-1 protein; contains similarity to Pfam domains PF00587 (tRNA synthetase class II core domain (G, H, P, S and T)) , PF02403 (Seryl-tRNA synthetase N-terminal domain) contains similarity to Interpro domains IPR002314 (Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain), IPR015866 (Seryl-tRNA synthetase, class IIa, N-terminal), IPR002317 (Seryl-tRNA synthetase, class IIa)" /note="Predicted" /db_xref="GOA:A8WV22" /db_xref="InterPro:IPR002314" /db_xref="InterPro:IPR002317" /db_xref="InterPro:IPR006195" /db_xref="InterPro:IPR010978" /db_xref="InterPro:IPR015866" /db_xref="InterPro:IPR033729" /db_xref="InterPro:IPR042103" /db_xref="UniProtKB/TrEMBL:A8WV22" /protein_id="CAP24333.1" /translation="MVLDIDLFRVERGGNPDVIRKSQRDRYKDVTLVDQVIEWDEKWR KEKFLADRLNRQKNAISKAIGEKMKKKEPQGNDDSVAEDIVARLAELKLDELSTLTVV QLKKLRLLVDEKSVETAAAAVAHETARHEKLIQIGNLLHDSVVVSDKEDNNKVERTFG DLTTRKKYSHVDLVVMVDGFDGERGTVVAGGRGYFLKGPLVFLEQAIIQLALQRLNLK GYTPLYTPFFMRKEVMQEVAQLSQFDDELYKVSSKGSEVAGDTTVDEKYLIATSEQPI AAYHRNEWIKETELPIKYAGVSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPND NESWTLFDEMIGNAESYYQELQIPYHVVNIVSGELNNAAAKKFDLEAWFPGSGAMREL VSCSNCLDYQSRRLKVRYGQTKKLNGEVPFVHMLNATMCATTRVICAILENNQTEEGI NVPTAIQQWMPEQYRTFIPFVKPAPIDVDAKKAAAKN" CDS join(512405..512554,512606..512815,512865..513086, 513131..513241,513698..513867,513914..513971) /gene="CBG03436" /locus_tag="CBG_03436" /standard_name="CBG03436" /product="Protein CBG03436" /note="contains similarity to Pfam domain PF00153 Mitochondrial carrier protein contains similarity to Interpro domains IPR002067 (Mitochondrial carrier protein), IPR018108 (Mitochondrial substrate/solute carrier), IPR002113 (Adenine nucleotide translocator 1)" /note="Predicted" /db_xref="GOA:A8WV23" /db_xref="InterPro:IPR002067" /db_xref="InterPro:IPR002113" /db_xref="InterPro:IPR018108" /db_xref="InterPro:IPR023395" /db_xref="UniProtKB/TrEMBL:A8WV23" /protein_id="CAP24334.1" /translation="MSANTTHAPIGFKKRTDAEKFAIDLLIGGVSASVSKTAVAPIER VKILLQVQYSHKDIPPDKRFNGIIDAFIRVPREQGFSSFWRGNLTNVIRYFPTQAFNF AFNDLYKSILLKNIKRENNVLSYSIRTLVSGGLAGCSSLCIVYPLDFIRTRLSADINH HTNREYKGLVDCTLKTVRNEGVGALYRGFAISLQTYFIYRSVYFGLYDAVRNTINTDK KKLPFYASFAIAQGVTVLSSYLTYPWDTVRRRMMVKGQLSTSKAFAAARKIVHEEGFR GLYKGALANIFRSAGGALVMALYEEIHKHM" CDS join(514338..514340,514390..514509,514560..514696, 514738..514817,515125..515475,515522..515898, 515943..516368,516420..516632) /gene="CBG03437" /locus_tag="CBG_03437" /standard_name="CBG03437" /product="Protein CBG03437" /note="contains similarity to Pfam domain PF01532 Glycosyl hydrolase family 47 contains similarity to Interpro domain IPR001382 (Glycoside hydrolase, family 47)" /note="Predicted" /db_xref="GOA:A8WV24" /db_xref="InterPro:IPR001382" /db_xref="InterPro:IPR012341" /db_xref="InterPro:IPR036026" /db_xref="UniProtKB/TrEMBL:A8WV24" /protein_id="CAP24335.2" /translation="MLLTKNALIFVALFVNSFSRKSTDNIFLLTDEEIRYSSISKEDI EYGRSKTREMFEFGWRNYMEFAFPADELDPIHCRGRGHDHDNPDNININDVLGDYSLG LIDTLDSLVVFGDADEFKRAVNLVVKTVSFEKNTTIQVFESTIRVMGGLLAAHMIAVD KTNRFGPFYMSEYGGELLTLAHDLAGRLLPAFEGTATGIPFTRVNLQKGVLPGTTNFT CTSGAGSLLLEFGVLSKLLGDDSYEKLARRVNEKLWTLRNQATGLHGNLIDIQTGEWV GHLAGLGAGIDSFYEYMLKSYILFGNERDLDMYNESFQQIVTYMRRGRNVCADTNGDS PIYVNVDARDGSTSNTWIDSLQASFAGVLVLAGQVDEAVCHHALYYAIWKKYGVLPER FNWQLQAPDVSFYPLRPEFIESTYLLYTATKNPFYQHVGLEILESLETITRVKCGFAT VHDVADRSLEDRMESFFLSETLKYLYLLFDDNHPINKKEQERVLFSTEGHLLPISSLF NSPSSPPSILDPPLSTLPRGNASSCETGYEFSAGIPPLRHPQMKQLFEVVGVNSNLHN WV" CDS join(517149..517265,518379..518530,519753..519883, 519931..520421,520469..520635,520682..520817) /gene="Cbr-pyp-1" /locus_tag="CBG_03439" /standard_name="CBG03439" /product="Protein CBR-PYP-1" /note="C. briggsae CBR-PYP-1 protein; contains similarity to Pfam domain PF00719 Inorganic pyrophosphatase contains similarity to Interpro domain IPR008162 (Inorganic pyrophosphatase)" /note="Predicted" /db_xref="GOA:A8WV25" /db_xref="InterPro:IPR008162" /db_xref="InterPro:IPR036649" /db_xref="UniProtKB/TrEMBL:A8WV25" /protein_id="CAP24336.2" /translation="MGLVLIAKRNKPLIAMMSAILFTAALYFATRYVLSILFMVAAIH TSSMDSGSETVQFSSPRGSLTTAFSSSSSGAQRKMSANSERSLHTRPLADTAVIHKTQ SSKMSTGAGDSPVYQAVERGSLYSLDYRVFIKGPQGIVSPWHDIPLFADKEKSVYNMI VEIPRWTNAKMEMATKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPN HVVPDTGAKGDNDPIDVIEIGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVND ENADKLNDINDVEKIYPGLLAASVEWFRNYKIPAGKPANEFAFNGEFKNREYAEKVIA ETNEFWKALMKEASPALNTVSRVPEAVHQATDDSAAAAIAATPEHGPSVALPGDVDKW HFVQG" CDS join(522301..522501,523673..523806,523852..524155, 524202..525284,525335..526519,526570..526874, 526922..527054) /gene="Cbr-uba-1" /locus_tag="CBG_03440" /standard_name="CBG03440" /product="Protein CBR-UBA-1" /note="C. briggsae CBR-UBA-1 protein; contains similarity to Pfam domains PF10585 (Ubiquitin-activating enzyme active site) , PF09358 (Ubiquitin-activating enzyme e1 C-terminal domain) , PF00899 (ThiF family) (2), PF02134 (Repeat in ubiquitin-activating (UBA) protein) (2)contains similarity to Interpro domains IPR018074 (Ubiquitin-activating enzyme, E1, active site), IPR018965 (Ubiquitin-activating enzyme e1, C-terminal), IPR000594 (UBA/THIF-type NAD/FAD binding fold), IPR018075 (Ubiquitin-activating enzyme, E1), IPR000127 (Ubiquitin-activating enzyme repeat), IPR019572 (Ubiquitin-activating enzyme), IPR000011 (Ubiquitin/SUMO-activating enzyme E1)" /note="Predicted" /db_xref="GOA:A8WV26" /db_xref="InterPro:IPR000011" /db_xref="InterPro:IPR000594" /db_xref="InterPro:IPR018075" /db_xref="InterPro:IPR018965" /db_xref="InterPro:IPR019572" /db_xref="InterPro:IPR032418" /db_xref="InterPro:IPR032420" /db_xref="InterPro:IPR033127" /db_xref="InterPro:IPR035985" /db_xref="InterPro:IPR038252" /db_xref="InterPro:IPR042063" /db_xref="InterPro:IPR042302" /db_xref="InterPro:IPR042449" /db_xref="UniProtKB/TrEMBL:A8WV26" /protein_id="CAP24337.2" /translation="MTTILEQPSPNSASTKASISKQRQGDNDYPPAKRSKGGEEDETV KNGNGQSVDSSKQQTLSGHDVSGQSGKVTVKSTDNGGQDEKMDTSNNAGGNGGNADEL LDKNLYSRQIYTLGESAMVNLRTASVLISGLGSVGVEIAKNLVLGGVRHVTIHDTKLA KWTDLSAQYYLREADVGHNRATACYERLAELNDSVNVEVSTADLTEDFVKNFDLVVLT DATRTQQLQVSSWTRSHNRRILIADARGVFSYIFNDFGDNFRIDDTTGEQVREFFIEH IDRTTGEVTTLENLFHGLEDGDHVTFSEVKGLDGINGCEPIKITVKNASKFNIGEFAA SFPDYIEGGRCRQVKVPISVTHTPFKKSLEEPEFGIWDYAKFEYPAHLHALWTALYAF EEKNGRSPAPRSTEDVALLKSFIPAGTEEIPEKLIELFSYSAAGNLVTVSSVVGGIAA QEAMKGVTHHMTPLKQWLHLDHVEALPGDWTSFDNTKLSETDCQPRQSRYDGQAAVFG WPYQECLFHQRWFVVGAGAIGCELLKNLAMMGVACGEGGLIKITDMDQIEISNLNRQF LFRRKDVGGKKSECAARAVTSFNSDVRIEALAERVGVDTEHIFNDDFFGELNGVANAL DNVDARRYMDRRCVYYRLPLLESGTMGTKGNTQVVYPYLTESYSSSSDPPEKEIPVCT LKNFPNEIQHTIQWAREQFETFFAQPGEMANKFLSDERAFNDHINKLISGQQIDILQK VKDALIDGRPSSAEECIHWARNQFQELYHNAIAQMLHSFPPDQLTDSGAKFWSGAKRC PHVLNFDPSKEEHFNFVYAASILRAEMYGVKPILDREEVIRIALSINPEPFEPRSGVK IAVTDAEAKEQNERGGSSGLGLDDDTAIESLKLKLATLNVQATNKLNCLDFEKDDDSN HHMEFITAASNLRAENYDILPADRMKTKQIAGKIIPAIATTTAAVAGLVCVELYKVVD ANGVPKTPVERFKNTFLNLSMPFFSSAEPILAPKKKYVDKEFTLWDRIDIQGPLTLKE FIDEVQKQTGGCEMSMLSAGQCLLFSFFMNGAKKEERLKTEVKAVYEELLKKKLHESV RAIVLEPMMTDPNDEDVEVPYIRYAF" CDS complement(join(527484..527582,527627..527743, 527793..527909,527966..528298,528356..528826, 529061..529202,529247..529434,529730..529866, 529911..530005,530055..530231,530437..530624, 530652..530785,533626..533707)) /gene="Cbr-mam-2" /locus_tag="CBG_03441" /standard_name="CBG03441" /product="Protein CBR-MAM-2" /note="C. briggsae CBR-MAM-2 protein; contains similarity to Interpro domain IPR000998 (MAM domain)" /note="Predicted" /db_xref="GOA:A8WV27" /db_xref="InterPro:IPR000998" /db_xref="InterPro:IPR013320" /db_xref="UniProtKB/TrEMBL:A8WV27" /protein_id="CAP24338.2" /translation="MPGYEAERDRLREHLGIEWIQNGLAKSGWTPKKPIRHSSDLNCD FSHPEKCQWKNMADENQLDSRVIFFQFLDFYLFEKIDYTEFPVLRVGPGPSKIQQGDK MIFVGDKKREEQHAIFYSSPINCQNSTGNLTFTYWVYNSARVEVILLEDDGRGGYKMI FDDPSEEKPYVDCGTIQLNTECHAEIPPRDKPFRIGIRAYEISNTDGSFVMIDNILYS ASLCKVGIDVGDTFKSNALETGASGKHIDTAAELKCDNFDSKCRWRSGGDAMVMWRRS SSALPSPLLLNATGTTVGPRGGYAVLYVEQGTQKKSLDILRSDPITCQSLTENEFTFR FWEFGQIELEACAVDLMLKDIECVPIPRGSSPANVKLTFRKATKNFMIIIRVSSLNSD FDNMVIVDDISYRATLCTDALSVFDIGDSFVSTPMLSLLLSRNVHTAQDLSCDFSKRA SACLWGMLNQDEDSSDIASNTWTVGHGPLNDEKLYSLTGISEIPEGEFGLAKFETGGS AVLLSEVVRCALDNVHVQFKLWTTGTAKIKVCLVEESSPSLLDCQDASSGDVVVDLPR IRRPFRVAFSAEAEDQGMVLIDDIIVTGQICPPTAAKQFSSKTFRPTADIPDPNVCRL LSCDFHLGHACLYESSQVSNSAMHGVANRKLNAFLTRSKRVFILESPQFRLNTVARLH FDYRLQGDANLFICNDSGTKELESCFKVEGREGNDYIELLASDTKVYIISRLSETGKS GSLEVSKIVFTDTSDQTIC" assembly_gap 534693..534702 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(535480..535606,535661..535884,535934..536045, 536130..536646,536696..536915) /gene="CBG03442" /locus_tag="CBG_03442" /standard_name="CBG03442" /product="Protein CBG03442" /note="contains similarity to Pfam domain PF05997 Nucleolar protein,Nop52 contains similarity to Interpro domain IPR010301 (Nucleolar, Nop52)" /note="Predicted" /db_xref="GOA:A8WV28" /db_xref="InterPro:IPR010301" /db_xref="UniProtKB/TrEMBL:A8WV28" /protein_id="CAP24339.1" /translation="MDVDLASVEVVFAQKLACGEPATRQRALRVLHDWIRDQSAKKPF DEADLMRLCKGLHYVMWMQDKMMLQEELADRIGGLINIFTSEDEKVRFVACFLKSLSN EWPHIDRWRMDKFLMEVRRMVRSCFAHLAGLKWKKEIRDQYWNVFQKTTISADKSFNE ALKFHFASILLDELDAAGGLTKKQVTACLKPYIELIGDKDISEYLFTSLYDEIFKTIL QQKSDMVSAAEEGEEMEQEAGIEFSYKEIGAMLFEVGKKEHLNAKRRKKIYDLVKKFD KCARGQDPLHFEAPAPAEKLTKNDYEEAEKKAVELAKSFKEEKKKARKVKSLIKKRAR EAAEAAQKESGDVEVPEDEISEVKKKSGKTTAIPKVKKGKPLLKAKGVGKKQMLGQKK KKGGKKN" CDS complement(join(537022..537336,537383..537695, 537746..537978,538025..538281,538332..538684, 538734..538819)) /gene="Cbr-dhp-2" /locus_tag="CBG_03443" /standard_name="CBG03443" /product="Protein CBR-DHP-2" /note="C. briggsae CBR-DHP-2 protein; contains similarity to Pfam domain PF01979 Amidohydrolase family contains similarity to Interpro domains IPR011778 (Hydantoinase/dihydropyrimidinase), IPR006680 (Amidohydrolase 1)" /note="Predicted" /db_xref="GOA:Q61YQ1" /db_xref="InterPro:IPR006680" /db_xref="InterPro:IPR011059" /db_xref="InterPro:IPR011778" /db_xref="InterPro:IPR030633" /db_xref="InterPro:IPR032466" /db_xref="UniProtKB/Swiss-Prot:Q61YQ1" /protein_id="CAP24340.1" /translation="MSLLIKNGTIVNDDAMFKSDVLVHDGKIVEIAPSIDPTPGLEVV DATDRFVIPGGIDPHTHMQLPFMGEVAKDDFHRGTEAAVAGGTTMIIDFVIPTKGESL LVAYDRWRGWADPKVVCDYGLSMAITSWGQEIAKEMEMVTKADYGINSFKFFLAYAGV FMVRDEEFYQGMLQCAKLRALARVHAENGAVIAERCEHLLSSGITGPEGHTQSRPEEL EAEATFRACTMASQANCPLYVVHVMSKGAAAAIAHHRKKGAVVFGEPIAAGLATDGSH YYNEDWLHAARYIMSPPLSRDPSTPNALMKLLAAGELHLTATDNCTFDCHQKSLGKDD FTKIPNGVNGVEDRMSVVWDKGVHAGIIDPMKFVAVTSTMAAKIFNCYPRKGRIAVGS DADIVVWNANATRTISKDTHHHAIDFNIFEGMQVHGVPETTICRGRIVWADGQLRTVQ GAGRFVPLPPDSQIVFSAVDNRGKALEPVKVERAPYVATTLEAPDANANIVVKTRSAV PPGGISSIQF" CDS join(541336..541470,541514..541810,541942..542145) /gene="CBG03445" /locus_tag="CBG_03445" /standard_name="CBG03445" /product="Protein CBG03445" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WV31" /protein_id="CAP24342.2" /translation="MSVSKSVTFLFLICSCFVGHDAWDQITTWGFRSIFLYANQTAVW KLTFDVNHKDTTLQAYKVVTDWTPTYWVCAQFLISFSTFLVFQKTKDAYLNKNNKLSN RTYAEEQAWSFLLQRDAMRKFVRYMFRATIDTKYFTEKDASRMRDIWWKSDRDCKSNF TLMRPIFKNRTVTEFAKTHKDFGTKFEKLTGDYYYYHFSSAERLNWTLIAE" CDS complement(join(542174..542362,542406..542597, 542643..542720,542764..542892)) /gene="CBG03444" /locus_tag="CBG_03444" /standard_name="CBG03444" /product="Protein CBG03444" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WV30" /protein_id="CAP24341.2" /translation="MLKQLCWFSVALLFFEPSLATDQVMVPTFETVLRDYGKQWIVEL TCNFNEIETVEEARRFTMEAIDNNWAPVLRNPVCAGQDSQPSLMNPIDKVKENAENFI LQREALKMYISELLQRATSSGVLNSIEAESVIREKFWEVELRQQIGFDVLKEKFFKKV SEDYSDEVPRKLETISTEILETDTLLNSRLYWTYY" CDS complement(join(543804..544115,544168..544664, 544895..544982,545029..545133,545371..545769)) /gene="CBG03446" /locus_tag="CBG_03446" /standard_name="CBG03446" /product="Protein CBG03446" /note="contains similarity to Pfam domain PF01697 Glycosyltransferase family 92 contains similarity to Interpro domain IPR008166 (Domain of unknown function DUF23)" /note="Predicted" /db_xref="GOA:A8WV32" /db_xref="InterPro:IPR008166" /db_xref="UniProtKB/TrEMBL:A8WV32" /protein_id="CAP24343.2" /translation="MFSATSSSSSMPPSSYNSYEKLPRHHLHRPGNNSFYIPLHTLNY FQCVILLYFFVFTVYYHDRYGGKIENVQITSAVFDSNSKELILIFLFDSPHTPRELFL GFGSSDAETLRNETQIELKPPPGFASNRQIFMWSSIENEKPESLTVNAEHPKSLLLRD HTGHPFLELSLQEPYSDFRDVVSCFSPISGDFEMVLTSLTSSIAMGSFVSIPYEELTG ELYKFLRIFEKSGNLRLTAFPLIRHEPHLDSTENYYSKMLKLKTDVAFLHCWLMHKNR AKFMVFQNSAEIVLPLSTTLENPVYISEFTTMFEAHRVDGYSILEYNARITTDKRLGD FLDFSIRQAIESSKIEELNGNSRALVMKMHPSNSQNLYQRGKMYPFFKNVPSPPKVIP KKTVNKINRIIEIIEENDAFWTLIKECSENSKVWKCSSGKCVRPSLRHQSLHGWYSYD IHFSIFFNVESFDCPD" assembly_gap 547910..548553 /estimated_length=644 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS 548666..548911 /gene="CBG26395" /locus_tag="CBG_26395" /standard_name="CBG26395" /product="Protein CBG26395" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IFF4" /protein_id="CAR98634.1" /translation="MVFQNSAEIVLPLSTTLENPVYISEFTTMFEAHRVDGYSILEYN ARITTDKRLGDFLDFSIRQAIESSKIEESNGNSKSMG" CDS join(566564..566654,566701..566766,566814..567057, 567101..567275,567326..567392,567437..567583, 568303..568853,568864..568884,568887..568993, 569040..569196,569246..569356,569403..569551, 569852..570180,570227..570878,570926..571295, 571298..571795,571846..572106,572155..572640, 572689..572847,572891..573154,574448..574618, 574667..574840,575054..575227,575273..575624, 575671..575851,575900..576036,576087..576283, 576334..>576501) /gene="Cbr-gon-1" /locus_tag="CBG_03449" /standard_name="CBG03449" /product="Protein CBR-GON-1" /note="C. briggsae CBR-GON-1 protein; contains similarity to Pfam domains PF08685 (GON domain) , PF00090 (Thrombospondin type 1 domain) (12), PF05986 (ADAM-TS Spacer 1) , PF01421 (Reprolysin (M12B) family zinc metalloprotease) contains similarity to Interpro domains IPR000884 (Thrombospondin, type 1 repeat), IPR013273 (Peptidase M12B, ADAM-TS), IPR012314 (Peptidase M12B, GON-ADAMTSs), IPR010294 (ADAM-TS Spacer 1), IPR001590 (Peptidase M12B, ADAM/reprolysin)" /note="Predicted" /db_xref="GOA:A8WV33" /db_xref="InterPro:IPR000884" /db_xref="InterPro:IPR001590" /db_xref="InterPro:IPR010294" /db_xref="InterPro:IPR012314" /db_xref="InterPro:IPR013273" /db_xref="InterPro:IPR024079" /db_xref="InterPro:IPR036383" /db_xref="InterPro:IPR041645" /db_xref="UniProtKB/TrEMBL:A8WV33" /protein_id="CAP24344.1" /translation="MRSIGGSFHLLQPFVAALLLLVVCLVYALQSGSGSTTTLSSPDV LFSRAKYSGVPVHHSRWRHDAGIHIIDSHHIVRRDSHGRRGKRDVRTSGPRLHGVARD CGHACHLRLRSDDAVYIVHLHRWNQIPDSHNKSVPHFANSNYQPMVLYLDSEEEVRGG MGRTDPDCIYRAHVKGVHQHSIVNLCDSDDGLYGMLALPSGIHTVEPIISGNGTDDGA GRHRQHLVRKFDPMHFKSFDHLNSTSVSEAETTVATWQDKWEDVIERKARSRRAANSW DHYVEVLVVADTKMYEYHGRSLEDYVLTLFSTVASIYRHQSLKASINVVVVKLIVLKT ENAGPRITQNAQQTLQDFCKWQQYYNDPDDSSVQHHDVAILLTRKDICRSQGKCDTLG LAELGTMCDLQKSCAIIEDNGLSAAFTIAHELGHVFSIPHDDERKCSSYMQVNKVIRD IEMNRFIQNNFHIMAPTLEYNTHPWSWSPCSAGMLERFLENNRGQTQCLFDQPVERRY YEDVFVRDEPGKKYDAHQQCKFVFGPASELCPYMPTCRRLWCATFYGSQMGCRTQHMP WADGTPCDESRNMFCHHGACVRLAAESLTKVDGQWGDWMDWGTCSRTCGGGVQKALRD CDSPKPRNGGKYCVGQRERYRSCNTQECPWDTQPYRELQCAEFNNKDIGIQGVASTNT IWVPKYANVAPNERCKLYCRLSGSAAFYLLKDKVVDGTPCDRNGDDICVAGACMPAGC DHQLHSTLRRDKCGVCGGNDSSCKVVKGTFNEQGTFGYNEVMKIPAGSANIDIRQKGY NNMKEDDNYLSLRAANGEFLLNGHFQVSLARQQIAFQDTVLEYSGSDAVIERINGTGP IRSDIYVHVLSVGSHPPDISYEYMTAAVPNAVVRPISSALYLWRPTESWSDCDRACRG QQTQKLMCVDMSTHRQSHDRNCQNVLKPKQATRMCNIDCSTRWITEDVSTCNAKCGSG QKRQRVSCVKMEGDRQTPVSEHLCDRNTKPAEITSCYVDCSGRRWSYGEWTTCSETCG SNGKMHRKSYCVDGSNRRVDESLCGREQKEGTERECNRIPCPRWVYGHWECSRSCDGG VRMRHAQCLDAADRETHNSRCGPAHTHEACNEHACTWWQFGVWSECSVKCGDGVQYRD SNCTDRHGSVLQEHRCNKMEKILTKQCHREPCPKYKLGEWSQCSVSCEDGWSSRRVSC VAGNGTEVDISLCGPASDRPASHQTCNLGTCPFWRTTDWSACSVSCGIGHRERTIECI YRDQSVDSSFCGDSKLPETRQTCHLLPCTSWKPSHWSPCSVTCGSGIQTRSVSCIRGS EGNVVDEYFCDRNTRPREKKSCEKDTCEGPRVLQKLQADVPPIRWATGPWTACSATCG NGTQRRLLKCRDHVRDLPDEYCSHLEKEVSTRNCHLRDCSFWKSGEWEDCPATCGTHV QQSRNVSCVSAEDSGKTILRDTDCDVQKRPTSTRNCRLEPCPKGEEHIGSWIIGDWSK CSASCGGGWRRRSVSCTSASCDETRKPKMFDKCNEELCPPLTNNSWQISPWTHCSVSC GGGVQRRRIWCEDVLSGRKQDDTECFEVKPREQRDCEMPPCRSRPINKTSSSSISSDS TSSASASLLPILPPVVSWQSSAWSACSAKCGRGTKRRVVECVNPSLNVTIASTECDQT KKPVEEIRCRTKHCPKWKATAWSSCSVTCGRGVRRRDVQCYRGRKNHVADSECNDKTK LHSVANCFPVACPAYKWNITPWSKCKDECARGQKQTRRVHCVSTSGKRAAPRMCDVSR APISVRECDTSNCPYEWVPGDWQTCSKSCGEGVQTRDVRCRRKDNFNTTVPIIFMLED EPAVPKEKCEMFPKPIESQVCELNPCDSEFKWSFGPWGECSKNCGQGIRRRRVKCVAN DGRRVERIKCTTKKPRRTQYCFERNCLPSTCQELKSLSGKARDGNYTVLLDGFTIEVY CHQMNSTIPKAYLNVNPRTNFAEVYGKKLIYPHTCPFNGDRNDSCHCSDVGDASAGLT RFSKVRIDLLNRKFHLSDYTFAQREYGVHVPYGTAGDCYSMKECPQGQFSIDLKNAGL KLVDDLNWEDQGHRTSSRIDRYYNNAKVVGRCGGFCGKCVPEKYKGLIFEVNTRLLNH VKNGGSIDDELDDDGFSGDMD" CDS complement(join(578302..578403,578450..578986, 579031..579159)) /gene="Cbr-dhs-12" /locus_tag="CBG_03450" /standard_name="CBG03450" /product="Protein CBR-DHS-12" /note="C. briggsae CBR-DHS-12 protein; contains similarity to Pfam domains PF08659 (KR domain) , PF00106 (short chain dehydrogenase) contains similarity to Interpro domains IPR013968 (Polyketide synthase, KR), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR)" /note="Predicted" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8WV34" /protein_id="CAP24345.1" /translation="MAPKTIFITGANRGIGLGLVKELLKVSGVETIVAGARNIDGAKE LQSVAKSDSRVHLLAVDVANDESIANSVNSVAGLVGERGLNLLINNAGVIEPYGTSST PNRATVLKCIDVNAVSALLVSQHFLPLLQKAAAKEDGDTLSADRAAIVNIGSDCASQA LNLRGSGPGNSLLAYKMSKVAMVSFSRSMAADFKNLNIPVLITNIHPGWVQTDMGGSN AEISVDESVTKIVASIGKLNASHHAGLFNRELETMPF" CDS complement(join(580114..580383,580435..580562, 580612..580864)) /gene="CBG03451" /locus_tag="CBG_03451" /standard_name="CBG03451" /product="Protein CBG03451" /note="contains similarity to Pfam domains PF00043 (Glutathione S-transferase, C-terminal domain) , PF02798 (Glutathione S-transferase, N-terminal domain) contains similarity to Interpro domains IPR004046 (Glutathione S-transferase, C-terminal), IPR004045 (Glutathione S-transferase, N-terminal)" /note="Predicted" /db_xref="GOA:A8WV35" /db_xref="InterPro:IPR004045" /db_xref="InterPro:IPR004046" /db_xref="InterPro:IPR010987" /db_xref="InterPro:IPR036249" /db_xref="InterPro:IPR036282" /db_xref="InterPro:IPR040079" /db_xref="UniProtKB/TrEMBL:A8WV35" /protein_id="CAP24346.1" /translation="MIQYKLIYFDVRGLGEVSRQLFHLAGVEFEDVKISRNDEQAWLE LKKSTPFGQLPILKVLDTESQKEIEIPQSSAIGRYLANQFGYAGKSPEEKAMVDAVID QFKDFLVPQKQLTLAVRTKKSEEEVNRVKEEIVTPAKNEYFKILKKLLGNNSSGFLVG NGITWADLQISDNLTTLEGFGLFTPLEEPILAKFHEKIMNTPSLKTYFEQRLASLL" CDS complement(join(581033..581302,581348..581475, 581524..581616,581669..581801)) /gene="Cbr-gst-4" /locus_tag="CBG_03452" /standard_name="CBG03452" /product="Protein CBR-GST-4" /note="C. briggsae CBR-GST-4 protein; contains similarity to Pfam domains PF00043 (Glutathione S-transferase, C-terminal domain) , PF02798 (Glutathione S-transferase, N-terminal domain) contains similarity to Interpro domains IPR004046 (Glutathione S-transferase, C-terminal), IPR004045 (Glutathione S-transferase, N-terminal)" /note="Predicted" /db_xref="GOA:A8WV36" /db_xref="InterPro:IPR004045" /db_xref="InterPro:IPR004046" /db_xref="InterPro:IPR010987" /db_xref="InterPro:IPR036249" /db_xref="InterPro:IPR036282" /db_xref="InterPro:IPR040079" /db_xref="UniProtKB/TrEMBL:A8WV36" /protein_id="CAP24347.1" /translation="MPNYKLSYFDVRALAEPARLIFALFDVPFEDHRVSVEEWNDMKE KTPYGQLPVLEVDGVEIGQSMSITRYLARKFGIAGKSPEEEAIADSIVDQYRDFIFSF RQFTSATFYGKDAEHINKVRNEVVKPARDLFLGIINKILDKSQSGYLVGNSLTWADIV IADNLTSLLKNGFVDFAKEKKLGEFYNKIHSIPKIKEYVAKRKGTNI" CDS join(582303..582435,582491..582711,582758..583027) /gene="CBG03453" /locus_tag="CBG_03453" /standard_name="CBG03453" /product="Protein CBG03453" /note="contains similarity to Pfam domains PF00043 (Glutathione S-transferase, C-terminal domain) , PF02798 (Glutathione S-transferase, N-terminal domain) contains similarity to Interpro domains IPR004046 (Glutathione S-transferase, C-terminal), IPR004045 (Glutathione S-transferase, N-terminal)" /note="Predicted" /db_xref="GOA:A8WV37" /db_xref="InterPro:IPR004045" /db_xref="InterPro:IPR004046" /db_xref="InterPro:IPR010987" /db_xref="InterPro:IPR036249" /db_xref="InterPro:IPR036282" /db_xref="InterPro:IPR040079" /db_xref="UniProtKB/TrEMBL:A8WV37" /protein_id="CAP24348.1" /translation="MVHYKLTYFDARGLAETARQLFVLADVEFEDNRLTVEEFQKLKP SLPAGQVPILTVDGFEISQSATIWRYLARKFGYAGKTPEEEATADSIVDHFKDFLNSF KHYGAGLFFGKTQEELDRARKEIVEPAVQVYFSILKNQLEKTKTGYLVGSELTYADVA VAENLTTLKNTAFFHPEEEKSIASFHQKVLETPKLKEYLEKRKFSTL" CDS complement(join(584421..584713,584760..585003, 585051..585196,585241..585349,585399..585779, 585825..585869)) /gene="CBG03454" /locus_tag="CBG_03454" /standard_name="CBG03454" /product="Protein CBG03454" /note="contains similarity to Pfam domain PF04410 Gar1/Naf1 RNA binding region contains similarity to Interpro domain IPR007504 (H/ACA ribonucleoprotein complex, subunit Gar1/Naf1)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WV38" /db_xref="InterPro:IPR007504" /db_xref="InterPro:IPR009000" /db_xref="InterPro:IPR038664" /db_xref="InterPro:IPR040309" /db_xref="UniProtKB/TrEMBL:A8WV38" /protein_id="CAP24349.1" /translation="MAEKTMKEGIEEDFITDRNPVPLAFCAHPTPIAPENKNQEDDIV EQILELVDPIVVSNQNETRQASSIKSYGGDTESEFELSEDDSDFENLKDVRAGAFDSD EEFDRLVKYSAKIIEKTHKSEYPGENDTRKNRKTKNSQKTANIREYDDLPPLENLSIE CKSQLIEFGYVSKVVDCQVVIVSTCNEVLDFDSFLFDEKRNAIGQVYDIFGQVKSPQY VIRFNSSEEAALIPINMKMFYAPTEKEFSKTPFKGLNLAAANRDTIQSLNRQLDHQAA VQKANDRSYVPEVDSDVEFSDDEAEKEYRRNTQPQSASGRQSFEPNRGGRKRDRRGGQ RVQFASNAPAPKPYRRDHDGPITASSTTPSFTPSVIPSPTPAPPSRPPQSTESNPYAE FGCYSGFGRRFGI" CDS join(586070..586175,586219..586290,586530..586726, 586799..586954,587001..587270,587350..587532) /gene="CBG03455" /locus_tag="CBG_03455" /standard_name="CBG03455" /product="Protein CBG03455" /note="contains similarity to Pfam domain PF01746 tRNA (Guanine-1)-methyltransferase contains similarity to Interpro domains IPR016009 (tRNA (guanine-N1-)-methyltransferase), IPR007356 (tRNA (guanine-N1-)-methyltransferase, eukaryotic), IPR016653 (tRNA (guanine-N(1)-)-methyltransferase, metazoa)" /note="Predicted" /db_xref="GOA:A8WV39" /db_xref="InterPro:IPR007356" /db_xref="InterPro:IPR016009" /db_xref="InterPro:IPR016653" /db_xref="InterPro:IPR028564" /db_xref="InterPro:IPR038459" /db_xref="UniProtKB/TrEMBL:A8WV39" /protein_id="CAP24350.2" /translation="MSKLSNIQIMSEDTGEDIVEIMDESAERQDDEDDEPASKRSKDD IEGAVQIEGSQDEELPDAEGMSKKQLRRLKYKKKWEEKKLEKRAAERIRKKEKRAALK EAGDLSKLRKRKDFRTMAQSNSKQRIALDMSFDDLMIEKDQKRTVQQIGWCYTANRHS PNPFQFHVVGFDGLSRKIYNGNEHNLNQDIFLHHEKLETVFKPEEIIYLTSESENTLS ELDDTKVYVIGGIVDHNSQKGLCHRIAKEKGFGHARLPLDEHLLMKSRRVLTINQVYE ILVHWSVHKDWKAALLSIIPERKNAQLKKDKSETVDPPKEEPAAVVPKTES" assembly_gap 590044..590094 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(590500..590568,590839..590902,591354..592124, 592629..592691,592739..592849,593930..594016, 594065..594130,594175..594240,594328..594414, 594536..594622,594675..594740,594787..594852, 594899..595096,595143..595229,595277..595309, 595846..595911,595961..596026,596076..596162, 596359..596525) /gene="Cbr-dur-1" /locus_tag="CBG_03456" /standard_name="CBG03456" /product="Protein CBR-DUR-1" /note="C. briggsae CBR-DUR-1 protein ;" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WV40" /protein_id="CAP24351.2" /translation="MRTLLIFVSLCAVLCFTAPVSEQVSGLRAKRNLEEAASSGAEAV AEKHTLRVAARLETQTDRLKRQQSAEERTRAEADARRRERCRNRRPPQPTPGPPPPRN NCLPPPGPPPPCQQQYQPPSPCQQSQPQPPQPQPQRTGGCLPSPRGYENQPQPQQQYP QPQQQRGGCTYSQPQPQPQPQPPCYQPQPEPPRQTGGCLPGPYYPPNTMPPPQPQQPY PQQRSGGCRQRAPQPQQPQPQYPRTNEFRAPTVECHGNGQDPCNSQPQQEDPCVGKVN IVSVDAAGKVDHYLYETKKQAGDVIGNSANQASETAQGMHWAGDRAREAGSTLNEAAH DGYEHGRDGVADMREKLEETGHEIEEAAARKGDEAIDAAATKAEETKEAAKDTANSAI EKTKHGAGVVYDTAAEGASNMAQSMHDAGKSAGDAFVGGAEAAGEAVRDGAGWVGEKF QHGAAVVVDGAKSVGQGAADGATVLGENVAYGVGAVYGGAKYAGGKLINGTAQGAGIV AGGVVGAGEAAVDGAKAAGNAVVDGALTVGNKTKEGMRFVGENVAHGAGVVAGGAGKF KVDNAVEPFETSVGAGEAVVDGAKAAGDAVVDGALTVGNKTKEGVRFVGDNVAHGAGV VAGGAVGAGEAAVDGAKEGANYVGNKTLEGAEAVADGAKSLGSTVVDGVAAAGGAVVG GAKAVGSGIADGARFVGENVAHGAGVVAGGAEAAGGAVVDGAAAAGGAVVGGAKAVGG FVADTFNSGRDAAGDALKSAGSAVKASE" CDS complement(join(597069..597332,597552..597653, 597710..597857,599004..599203,599253..599776, 601225..601319,602010..602155,602482..602799)) /gene="Cbr-bed-3" /locus_tag="CBG_03458" /standard_name="CBG03458" /product="Protein CBR-BED-3" /note="C. briggsae CBR-BED-3 protein; contains similarity to Pfam domain PF02892 BED zinc finger contains similarity to Interpro domain IPR003656 (Zinc finger, BED-type predicted)" /note="Predicted" /db_xref="GOA:A8WV42" /db_xref="InterPro:IPR003656" /db_xref="InterPro:IPR036236" /db_xref="UniProtKB/TrEMBL:A8WV42" /protein_id="CAP24353.2" /translation="MQTQSPFGPLIALPPALLQSPATVAAAAANGHAPPVSLATFPSA FAAFASQIRSTQLQSLLQSQLQALNGDMGSTGNGPGTPLSRNNYGHHMQNQQHPQHVG KIRGTTEYPLRKRVGGSTVKTAKVWRYFDELPTIEQAAECRICRKKIKATNSSTTGMI RHLRSCHVQEYQLVQEARQNSMIVKMEEKARAKLLREMNEKVISNGIENHPMVVKKER PASESQKSPSASSSASDTASSASSSHFSTNPLIGLPAPVAINPTAPQTPTSTILNLSQ SQNQCQNQNPMFKMQNIKIEATEVEEEEIEQKCPTEIHRPTDLSGNTMLLSPKSANLS SAFSSIASFVDKKHEKKVENDHKIHMQIALMLLLDQQPSHVIDRPGFRSLFKFLLPDY HLPSGDIFQATIVPQLLDHMKLQIGAIFNNMSSSGSIPDQVMTSSSATSSYEDNSVNE SQTAEPHIADEEGELLEEELEEEENVEIEDDTSSASSSMDNDTCDAIASFIHYIGNDS FPHDELISLLSVVTNIFTYFSTRPHVQTHLQMTVSQPTTSQPLVQQVRFVASNLSIIS DYIRHTPDMQLLPLAVNQETMLEKLVDHIDQL" CDS complement(join(614993..615240,615289..615412, 615461..615802,615848..615953,616003..616243, 616291..616406,616452..616516)) /gene="CBG03460" /locus_tag="CBG_03460" /standard_name="CBG03460" /product="Protein CBG03460" /note="contains similarity to Interpro domain IPR000615 (Bestrophin)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WV43" /db_xref="InterPro:IPR000615" /db_xref="InterPro:IPR021134" /db_xref="UniProtKB/TrEMBL:A8WV43" /protein_id="CAP24354.1" /translation="MTISYSGNVIRLLLRWKGSIWRTVWRELLIYLFFFYSIRLFYLK GIDFIDDDDDDRNKIRRMFESFCRQCDSYTRLIPLTFLLGFYVSNVVARWWRQFETLY WPEDILSVLCTVLHQHDDKSKRRRHTIARYLNLSNALAWRDISSKIRLRFPTVHSLIE GGLLTEKEYQILETMHTENESSRWMTPLHWIQQIMRQVEDETKPTASLLNQFVAELRI FRQSLRKLYSYDWVCVPLVYTQVAALATYSFFFFSLFGRQPLLPEIESGKEIDLKVPI FTIVQFLFFVGWFKVGQDLMRPFGLDDDDIELNYILDRNVRISFAIVNHLQEAPIPDF ENDDDKMWEEMHPPVKDGETSPSLRIPQLPHSKYSSQLSEHPPRLHAYVPIDDDRTSI KDMESHHGCISVKKDKKHLNW" CDS complement(join(618500..618643,618711..618806, 618851..618978,619028..619103,619153..619380, 619448..619513,619558..619686,619733..619902, 619948..620067,620179..620366,620462..620569, 620623..620670,621114..621196)) /gene="CBG03461" /locus_tag="CBG_03461" /standard_name="CBG03461" /product="Protein CBG03461" /note="contains similarity to Pfam domain PF00566 Rab-GTPase-TBC domain contains similarity to Interpro domain IPR000195 (Rab-GAP/TBC domain)" /note="Predicted" /db_xref="GOA:A8WV44" /db_xref="InterPro:IPR000195" /db_xref="InterPro:IPR035969" /db_xref="UniProtKB/TrEMBL:A8WV44" /protein_id="CAP24355.2" /translation="MLLCTNLCFKRLDQFSAGKIDHEINNNDELEQMSRWSAGSTPGS VKPVYGARYPPLQHASPTKGADIPGRISKFRDYENSVSDAWDTRVKVDETLASASAAK VLAAHAAGKTTRDEEIMPPVSAAPTKNSRQQALQRLAIQKEPLPSSVSATPQTANPIY PKLPEISDQPRSAAPIASAPPYGGDRDQTRFARLRRLFSNGKSSGRSSPPVDVDLDKL REDCWMGIPHKLRPQAWRLLSGYLPTNAERREVTLQCKRDEYWHYVEQYFHSRFEDQN ADTFRQINIDIPRMCPLIPLFQQKMVQEMFERILYIWAIRHPASGYVQGINDLVTPFF VVFLSEFIPQDVEVGSFDVSQLPLEQCQLIEADSFWCVSALLDSIQDNYTFAQPGIQR KVLQLRHLMSRVDRPLHKHLESNGIEYLQFAFRWMNNLLMREIPLRATIRLWDTYLSE PDGFMQFHNYVCAAFLRTWSKQLQAEKDFQGVMILLQNLPTQSWGDREICELTADAFS LQSVFDGARRHLSAQAASP" CDS join(623915..624125,624170..624429,624475..624783) /gene="CBG03462" /locus_tag="CBG_03462" /standard_name="CBG03462" /product="Protein CBG03462" /note="contains similarity to Interpro domain IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8WV45" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR011009" /db_xref="UniProtKB/TrEMBL:A8WV45" /protein_id="CAP24356.1" /translation="MASVLGKGKYSKIYRGRSHPNGLWHAVKVDNTHRKASYAPHEVS ILRIIMYPKEVPHIPKPLAYVKTPSISYFAMTLLGKNISDLKLESPEQRFPSGTLSRI GLQVLHALKSMHKKGIIHRNIKPSKLMMGHEEDGKRWRLVHVIGFGFARQWAYNQDKF NPTKMHPRPLRKKVRFRGSLKFSSPNAHLGCDLSRRDDLWSLLFTFIDLNGSLPWAAE RDHSILAKKKLDPEIVLADMPPNFDKVMKHLIELKPLERPN" CDS join(624832..624981,625029..625223,625275..625322, 625719..626033) /gene="CBG03463" /locus_tag="CBG_03463" /standard_name="CBG03463" /product="Protein CBG03463" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WV46" /protein_id="CAP24357.1" /translation="MFFNVLRNLMFDSGQIPECKYIFESDDLTYEELKTRKKEEWEEI TGTFFEKDFIEINGPEKCLRKKKEWKTPSLDEFISARYLVIDDEMKEYHKLPAELEDY EKKKKTDVNYIEKMEREKNRTKLLYELKPTNGEEKYEHRRAANKLRADHDLKREKGKI FGGKKKKEGEYMACESLRERGEKHENEKEENIPIGEHLDIKKRSLAYREMLNTGEEMK FEGSPQIDDASLDQDGP" CDS complement(join(626223..626369,626413..626556, 626603..626787,626838..627629,627685..627972, 628029..628341,628388..628579)) /gene="CBG03464" /locus_tag="CBG_03464" /standard_name="CBG03464" /product="Protein CBG03464" /note="contains similarity to Pfam domains PF07478 (D-ala D-ala ligase C-terminus) , PF02222 (ATP-grasp domain) , PF02786 (Carbamoyl-phosphate synthase L chain, ATP binding domain) , PF02785 (Biotin carboxylase C-terminal domain) , PF02655 (ATP-grasp domain) , PF00364 (Biotin-requiring enzyme) , PF00289 (Carbamoyl-phosphate synthase L chain, N-terminal domain) contains similarity to Interpro domains IPR005481 (Carbamoyl-phosphate synthase, large subunit, N-terminal), IPR000089 (Biotin/lipoyl attachment), IPR011095 (D-alanine--D-alanine ligase, C-terminal), IPR005482 (Biotin carboxylase, C-terminal), IPR019825 (Legume lectin, beta chain, Mn/Ca-binding site), IPR005479 (Carbamoyl-phosphate synthetase, large subunit, ATP-binding), IPR003806 (ATP-grasp fold, DUF201-type), IPR003135 (ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type), IPR001882 (Biotin-binding site)" /note="Predicted" /db_xref="GOA:A8WV47" /db_xref="InterPro:IPR000089" /db_xref="InterPro:IPR001882" /db_xref="InterPro:IPR005479" /db_xref="InterPro:IPR005481" /db_xref="InterPro:IPR005482" /db_xref="InterPro:IPR011053" /db_xref="InterPro:IPR011054" /db_xref="InterPro:IPR011761" /db_xref="InterPro:IPR011764" /db_xref="InterPro:IPR013815" /db_xref="InterPro:IPR016185" /db_xref="UniProtKB/TrEMBL:A8WV47" /protein_id="CAP24358.2" /translation="MLRAVQKRYASTAPLIRPIQRVLVANRGEIAIRVQNTARKMGIE TVAVFSDADRNSLFVKKADKAYHIGPPLASESYLNMDKIINTALRSGAQAIHPGYGFL SENAGFAERCAQAGLVFIGPPAQAIRDMGAKNVSKQIMEDAKVPVVKGFHGEDQSDAN LKKKSQEIGYPVMLKAVYGGGGKGMRIAWNEEEFDEKLASARNEAKKSFGNDEMLVEK FVERPRHVEVQVFGDHHGNYVHLWERDCSVQRRHQKIIEEAPAPNMTHENRLKLGESA VRAAAAVGYVGAGTVEFIMDPRGEFYFMEMNTRLQVEHPVSEAITGTDLVEWQLRVAQ GEKLPLKQSEIPLNGHAFECRVYAEDTRKGAFMPTAGRLNYVDFPEDARIDTGVVSGD EVSIHYDPMIAKVNKFTEKYYPCYHIQVVVWGKDRNVAAAKLESALARTRISGLPTNI DFVRRVLAHPEFAAGNVYTDFIPDHHEELFAEAETPAEIFVESAVAHALAALKKSDAG VFQNLSFFRINLAPKYVYKIEGKDVTVQFDSDRRLTVSYDGNSYETLLNDVQALGDHE FKFTVEANGRRWSTIVKDLPETLMVNGVGQNEYETPAVHEAFDSLAGGAASHSAVAPM PGIIEKILVKPGDQVTTGQALVVMTAMKMEYIIRAPEDSKIEHIKCQAGKNVPKNAVL VQFA" CDS join(629203..629370,629420..629564,629672..629796, 629844..629958,630028..630141,630191..630308, 630361..630547,630590..630676) /gene="CBG03465" /locus_tag="CBG_03465" /standard_name="CBG03465" /product="Protein CBG03465" /note="contains similarity to Pfam domains PF02840 (Prp18 domain) , PF08799 (pre-mRNA processing factor 4 (PRP4) like) contains similarity to Interpro domains IPR014906 (Pre-mRNA processing factor 4 (PRP4)-like), IPR003648 (Splicing factor motif), IPR004098 (Prp18), IPR006095 (Glutamate/phenylalanine/leucine/valine dehydrogenase)" /note="Predicted" /db_xref="GOA:A8WV48" /db_xref="InterPro:IPR004098" /db_xref="InterPro:IPR014906" /db_xref="InterPro:IPR036285" /db_xref="InterPro:IPR039979" /db_xref="UniProtKB/TrEMBL:A8WV48" /protein_id="CAP24359.1" /translation="MDFKAKLLAEMAKKRKAVSSLEVKDGGAKFVRGADLESKRTQEY EAKKQELASKKRKIDDEILRESSSKTKVVPEENVAEFDEKVPMSDIHFRLRQRGQPIL LFGESELEVRKRLHQLELEQPELNEGWENELQTAMKFIGKEMDKAVVEGTADSATRHD IALPKGYEEDNWKIIEQSSTLLGVGDELKRDCDIILSICRYILARWARDLNDRPLDVK KTAQGMHEAAHHKQTTMHLKSLMTSMEKYNVNNDIRHHLAKICRLLVIDRNYLEANNA YMEMAIGNAPWPVGVTRSGIHQRPGSAKAYVSNIAHVLNDETQRKYIQAFKRLMTKLQ EYFPTDPSKSVEFVRKTV" CDS complement(join(630923..631054,631108..631265, 631319..631443,631490..631791,631839..632081, 632133..632296,632353..632477,632530..632674, 632884..632968)) /gene="Cbr-nhr-4" /locus_tag="CBG_03466" /standard_name="CBG03466" /product="Protein CBR-NHR-4" /note="C. briggsae CBR-NHR-4 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /note="Predicted" /db_xref="GOA:A8WV49" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR013088" /db_xref="InterPro:IPR035500" /db_xref="UniProtKB/TrEMBL:A8WV49" /protein_id="CAP24360.2" /translation="MNEQGMLVDPRLDFFFKMEQIDDYKYDEVDASPSTSNGIPDSTV GGRLICDVCGDVAFGKHYGINACNGCKGFFRRSVWSRRQYSCRFGGDCPVVKEHRNVC RSCRLKKCFEVGMNPDSVQNERDRNAKNGGGMGMGPMQSPIQITPSKESMISNGQTKR KRIRPDTTDKMTQTDGKMEIEDYDYEMAENSTPPGLLPLKQERISTPPSDLPVPMDYL IPSILMDIEHKVFFNHLVTVGDSINETKTPITLPFETVFRQPHLVCNRYPMNFVNNRV LTPEELIDGWRRHFTYYSDWCHAMDEFCALSPEDQVVLAKKKIILHGWLVHAYYSYKS GVDGICFANGAAHLPEGGHPSITEFYKECMPRYLNYVIYPMKNFQMDDNEMVLVKCIM FFSNESGLSPAGKAIVSAAREKYLSALYNYARSNKCSTSAQATLRIAKFMIMLSAVTS LTHLMNEGVHVTSLFNIIEFDQLIQATHKTTPPQHSPHPPTS" CDS join(637570..637614,638269..638709) /gene="CBG26396" /locus_tag="CBG_26396" /standard_name="CBG26396" /product="Protein CBG26396" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IFF5" /protein_id="CAR98635.1" /translation="MQIFKSFRRFRWFFSPVALDLSGENFNQKKIQKIFSRSPFNSIN KFTVLDFLLLKKVLNEIVTSKILKVGGHEKNNVLEISFKYASRGVERVGRGLRVRRRY RLSYTGKVKAVARLHSKARTTSVRRVTLSVVHRHGRMHTLAPKIPRKISCPPTFKPNL Y" assembly_gap 638004..638223 /estimated_length=220 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 642619..642718 /estimated_length=100 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(644185..644283,644333..644470)) /gene="CBG26397" /locus_tag="CBG_26397" /standard_name="CBG26397" /product="Protein CBG26397" /note="Predicted" /db_xref="InterPro:IPR019034" /db_xref="UniProtKB/TrEMBL:B6IFF6" /protein_id="CAR98636.1" /translation="MVQGKLKQKTVLPKGVKQKVKKAKKEGPKKGKFLHIAPKKAHII EAEKVSAHVTKIINDKNEEMVKGRADTAVGKNKK" CDS complement(join(645202..645369,645458..645685, 645731..645811)) /gene="CBG03468" /locus_tag="CBG_03468" /standard_name="CBG03468" /product="Protein CBG03468" /note="contains similarity to Pfam domain PF00226 DnaJ domain contains similarity to Interpro domains IPR003095 (Heat shock protein DnaJ), IPR001623 (Heat shock protein DnaJ, N-terminal), IPR009653 (Protein of unknown function DUF1242)" /note="Predicted" /db_xref="InterPro:IPR001623" /db_xref="InterPro:IPR029827" /db_xref="InterPro:IPR036869" /db_xref="UniProtKB/TrEMBL:A8WV50" /protein_id="CAP24361.2" /translation="MSFADILDAKPKEPKLYQILGCDGRATTDQITAEYRSRVRDCHP DKVMKGEESTATTEKFVELQNAYSILTSETSRKSYDSWLHSPFPVTFEEFAKSQDKFQ MSTHWAVPKTQSSIKDIPSESLTEKLSTDSDKTSSRWADGDRYQSSTASAFRNYEV" CDS complement(join(645985..646098,646426..646761, 646809..647624)) /gene="CBG03469" /locus_tag="CBG_03469" /standard_name="CBG03469" /product="Protein CBG03469" /note="Partially confirmed by transcript evidence" /db_xref="UniProtKB/TrEMBL:A8WV51" /protein_id="CAP24362.1" /translation="MGEEDSVEKRRQRSEEARRAALKLKDQQKKERERQIAADIANVD KKATKRIVFNDSDGEEDEEQTAESGDKKSSSGSSKRPKLFDSEDEKDEDIDGTTFEIK NRHSGSKGEQLMKLESRFNSDPRFKLDDKFAESDSDDDRNGEETAEKQEMQLEKDKNR ELLSKILGKSVEEKKPKTAETATLKARPFTRFDPENPEHVEWMKQFDAAKNPQKSSKK SADVEEKPQDSEDDDDDEEKEKDAEQKEDDEESGNEEFEKAEIYFKMDETFSAEMKGR KETGEPSSGGFSFLSMMGRTYDNDPETEEIEDSTSAEKEEKNTKEKVKVEKQLKNVEK GLLKVKVSTKFFVDPLSDEKLRSMAANFRRTQTLEKVIDNWAPHRDAIFKLWKKQRRD AVKKQKESFLTNGRRKRKAEDANGTVNNE" CDS complement(join(648089..648298,648354..648551, 648599..648777,648828..649401,649449..649633, 649858..650377)) /gene="Cbr-npp-1" /locus_tag="CBG_03470" /standard_name="CBG03470" /product="Protein CBR-NPP-1" /note="C. briggsae CBR-NPP-1 protein; contains similarity to Interpro domain IPR024864 (Nucleoporin Nup54)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WV52" /db_xref="InterPro:IPR024864" /db_xref="InterPro:IPR025712" /db_xref="UniProtKB/TrEMBL:A8WV52" /protein_id="CAP24363.2" /translation="MSSKRRNALLTIDLSLVPPDSEFGRKLVEEREEKPPTDAESTYG GKCMEAPGFQREKSLFSRIICCSDAAYNRMIFTICSVLIVIGRSTTLGVFGMSGTNTG TSTGEPVAKSPVMTRMAAFRSGAVGSGSVGAAPSLGSLSVATTTPSSSFLTPSTSNLT SAASRPPSIFNPGGTTGFGSTTNTTTGGSLFGSTLSKPTTGGLFGSSTSTFGGLGSTQ QQHQQQQSVVQQQQVVQQYHPFVKACGDPKILGNDNDGMIAKLNQVAASLGVGKAPYK DGNQIQTFTMEGNLFEKFKGIGYNKISERTDDEGHVTLVLKHPIANFNTEERKDKILE VIKTILASGPNVEVRYAPGSSMRSLPDGFTEICIIAKEGGFVASAIKLAQALNDTPKL TQLEAQLQVDKARVLPKVGMSKAQRDRYLETVPDGYDEQIWKQAIRENPAPKKLLPVP VRGWEALRERQRAQVGESKLFNEAIQSLVDRVEFTSNEHARALISMENIRNRHKTLSY RIIRILLAQWIAARFSRNVDADESAIEGRCDTLAQKINREYQVQFFVDQFYQILETKP DKLQESMWTMFDMTMEDEHYARKVLTKFVNICCGLFEKSNEQIESLEACRRALEG" CDS complement(join(650689..650774,650827..650928, 650990..651093,651144..651241)) /gene="CBG03471" /locus_tag="CBG_03471" /standard_name="CBG03471" /product="Protein CBG03471" /note="Partially confirmed by transcript evidence" /db_xref="InterPro:IPR025574" /db_xref="UniProtKB/TrEMBL:A8WV53" /protein_id="CAP24364.1" /translation="MSLFGSSTPQKTAFTFPTPGAPATSAGSLFGSTTPSKPLFGSTT QASSTPSLFGTTTTSTPSGGLFGKSTTSTTTTSSAGTLFGAAPTTTTTPSLFGSSNTV HSVVSKCCVVLLREKGFWEEGVFMNTE" CDS complement(join(652149..652235,652286..652407, 652453..652602,652651..652751,652800..653068, 653118..653191,653358..653480,653523..653649)) /gene="CBG03472" /locus_tag="CBG_03472" /standard_name="CBG03472" /product="Protein CBG03472" /note="contains similarity to Pfam domain PF07857 CEO family (DUF1632) contains similarity to Interpro domain IPR012435 (Protein of unknown function DUF1632, TMEM144)" /note="Predicted" /db_xref="GOA:A8WV54" /db_xref="InterPro:IPR010651" /db_xref="InterPro:IPR012435" /db_xref="UniProtKB/TrEMBL:A8WV54" /protein_id="CAP24365.1" /translation="MASSTAPPVDTSLQIIGYVALLLSCCAFGTMFVPLKRRNSKDGF FVQWIECGVIFIVGCIFYVARGFPKFEPIACIGGFLYATGNVFSVPIVEGIGMGVGFL IWTSLQIIVGWGVARFGLGQWIAPQNVKNDVLNYVGISLTIVSGVLLIFVKHVEPEPE NEYSVTSKEMEHRDEIELRTSDSERSSFDMTGLAKKVPFILMAMVLACLHGLMMTPIE YLKQENPPTDNFQVFDYIFPFYTSVFLFSTIYFLSYCVLLRRRAYVERNLVIPSIGYG LLWTAGMTLWFVSSDKLSQVVAYPCTARLPPLISGALDVFVFKSIQGSRSFTVLAISS IVGVVSVILIALSNQI" CDS join(655982..656037,656087..656156,656220..656627) /gene="CBG26398" /locus_tag="CBG_26398" /standard_name="CBG26398" /product="Protein CBG26398" /note="Predicted" /db_xref="GOA:B6IFF7" /db_xref="UniProtKB/TrEMBL:B6IFF7" /protein_id="CAR98637.1" /translation="MGDYDECLDVVNPNDKTFQTQFCWAHLNLSVEKILAKSETSVKT MSTTCGAGKPTDLKVSICMPRSCSESELKLALNHLRILPMTTNQYLNNSMDQDKFVCD VTCRPVDFQPDFLFWIVTVVLGTIVLICLFATVFDYYHEIEREKIKQLKKTSNEEDDG SLKFLLAFSSSQMEDPS" CDS join(656944..657036,657262..657372,657575..657765, 657812..657956,658005..658028,658607..658981) /gene="CBG26399" /locus_tag="CBG_26399" /standard_name="CBG26399" /product="Protein CBG26399" /note="Predicted" /db_xref="GOA:B6IFF8" /db_xref="UniProtKB/TrEMBL:B6IFF8" /protein_id="CAR98638.1" /translation="MIWVIFYWHRIFRLTPAYLTFILFYATYGPLTDFGPNEIVQRQD MENCKKYGWKNLLYINNIYEPRKNCLSISWYMAADTQMYLVSPLFLIGFLLGPVPGII ISSLVILFSILLNYWLFFHFDLPLTLIQAYMTGDDHIIHVLQDLVYEAAYIRIPPFIF GICMGYMMLKTRNMKIEMNNGPVFCLWINNTVSLYRSNWKVYVITILDSTWKTNLLRL FVSYIDSQRSIQYGKISTSLCGCISYSRLTMISPSNPQIFQYITKVVPSVVAACGFAV IWTLVFEMPFAKLESFFIRTLVANPASEKEKQCTKI" CDS complement(join(659472..659629,659674..659836, 659885..660070,660119..660385,660428..660607, 660658..660751,660797..660882,660930..661102, 661150..661300,661349..661678,661724..662175, 662224..662322,662471..662736,662783..662865, 662910..663212,663258..663290,663337..663387)) /gene="Cbr-mtr-4" /locus_tag="CBG_03473" /standard_name="CBG03473" /product="Protein CBR-MTR-4" /note="C. briggsae CBR-MTR-4 protein; contains similarity to Pfam domains PF00270 (DEAD/DEAH box helicase) , PF00271 (Helicase conserved C-terminal domain) contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR016438 (RNA helicase, ATP-dependent, SK12/DOB1), IPR014001 (DEAD-like helicase), IPR001650 (Helicase, C-terminal)" /note="Predicted" /db_xref="GOA:A8WV55" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR012961" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR016438" /db_xref="InterPro:IPR025696" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8WV55" /protein_id="CAP24366.1" /translation="MDFFDEMAGDGNDQAVEMEAAPVDPMKKLEEDKKRQARDQTKNL LADMKRDGGGVHFDEFTAKRARTEEAKEDAVVERPMENIVVHTIQTNSENCTHEVAIP PNGEFTPLKESSIEPAKYYPFQLDAFQKQAILCIENNESVLVSAHTSAGKTVVATYAI AQCLREKQRVIYTSPIKALSNQKYRELEEEFKDVGLMTGDVTINPDASCLVMTTEILR SMLYRGSEIIKEVGWVVYDEIHYMRDKERGVVWEETIILMSNHVKQAFLSATIPNARE FAQWVCSLKQQPVNVVYTDYRPTPLQHFIYPVNGEGMYEVVNVKGEFREDKFRDAMSG LATAGDSAGSFNQRRSGKGTSGDSNVLKIIRSVAANDGLNCIVFSFSRKECEAYALSL KDMDFNQPQEKLMVKSVYESAISQLSPEDQNLPQITNILPILKRGIGVHHSGLMPILK ETIEILFGEGLVKVLFATETFSMGLNMPARTVVFTSARKYDGTENRYISSGEYIQMAG RAGRRGKDDRGTVILMVDSAMSAVDAKQIIKGATDPLNSQFRLTYNMVLNLMRVEGMA VSHIISSSFHQFQSYAKIPGIDKKCAEAEKKINSFKFPWENEMRTYMDLVDHLARVKQ EIVKTQREPRYIVGFLHAGRLLSIKSGDRDFKWGILHNFKKVVNPEDKNDSIFVCDMI LAVEKNGKYDASNPATLLPGFDSRNRTWERVSMTLDKITAISAIRLKIPEVIDDSGKK RIDAAVKTAMERLGGEIPLLHPIDDMNIKTPEIKKLVDDEKIYKERIENHTINKAADF EDRKKQFEKKLEAIKEFDALKAERKSLQSTLHLEELTNRKRVLRRLEYLNADDSLQIK GKVACELSASDELILTEMILKGVFNPLDVAQTASLLSCFVFQDNCAAPKLSAALQTCL TELHDQARHVAKVSNECKMEVIEDKYVNSFNPGLMDVVSQWVSGASFNDIVRTTDVFE GSIIRCLRRLEEVLREMINAAKALSNKELEQKFEDARKMLKRDIVFAASLYL" CDS join(664642..664707,664750..664880,664931..664982, 665048..665382,665430..665540,665591..665669, 665715..665843,665889..666008,667547..667651, 667699..667840,667886..667989,668038..668240, 668282..668609,668661..669017,669064..670022, 670323..670487,670532..670664) /gene="CBG03474" /locus_tag="CBG_03474" /standard_name="CBG03474" /product="Protein CBG03474" /note="contains similarity to Pfam domains PF12710 (haloacid dehalogenase-like hydrolase) , PF00690 (Cation transporter/ATPase, N-terminus) , PF00122 (E1-E2 ATPase) , PF12409 (P5-type ATPase cation transporter) , PF00702 (haloacid dehalogenase-like hydrolase) contains similarity to Interpro domains IPR008250 (ATPase, P-type, ATPase-associated domain), IPR004014 (ATPase, P-type cation-transporter, N-terminal), IPR006544 (ATPase, P-type, unknown pump specificity (type V)), IPR001757 (ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter), IPR018303 (ATPase, P-type phosphorylation site), IPR000150 (Cof protein), IPR005834 (Haloacid dehalogenase-like hydrolase)" /note="Predicted" /db_xref="GOA:A8WV56" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR004014" /db_xref="InterPro:IPR006544" /db_xref="InterPro:IPR008250" /db_xref="InterPro:IPR018303" /db_xref="InterPro:IPR023298" /db_xref="InterPro:IPR023299" /db_xref="InterPro:IPR036412" /db_xref="UniProtKB/TrEMBL:A8WV56" /protein_id="CAP24367.1" /translation="MTLESGDHTLTLFAYRTGPLKTVLFYALTFLTLGIFRLILHWKQ KWNVKVRMVPCTFEAAEYVFIVDNHNVTELQPVLRKTETMIPTENGEMRKVPELRWFL YRKLEYIWIGDETFDGNDGDEDCCWKPSSDIADKIPSRSFLAVSEANVGLTSSEILRR LEFYGRNEIVVQLRPILYLLFMEVITPFYVFQIFSVTVWYNDEYAYYASLIVALSLGS IVMDVYQIRTQEIRLRSMVHSTESVEVIRDGNEQIIGSDQLVPGDVLLIPPHGCLMQC DSVLMNGTVIVNESVLTGESVPITKVALTDETHDSIFTMEKNSKNVLFCGTQVLQTRF YRGKKVKAIVLRTAYSTLKGQLVRSIMYPKPVDFRFTKDLFKFILFLACISGCGFLYT IVVMIMRGNTLRRIIVRSLDIITITVPPALPAAMSVGIINAQLRLKKKEIFCISPSTI NTCGAINVVCFDKTGTLTEDGLDFHVVRPVKASKKENNTENTISFMEEMTELTSRNGL SFDGDLVKAIATCHSLTRINGVLHGDPLDLILFQKTGWTMEEGVGDIEEETQRFDNVQ PSIIKPSDDEKAEYSVIRQFTFSSSLQRMSVIVFDPSEDRPDNMMLFSKGSPEMILSL CDPKTVPEDYLTQVNAYAQHGFRLIAVARRPLDMNFNKASKVKRDSVECDLEMLGLVV MENRVKPVTLGVINQLNRANIRTVMVTGDNLLTGLSVARECGIIRPQKRAFLVEHVPG ELDQYGRTKLIIKQSVSSSDEVIEDDESVSVSMGSSTWKGSSENDGFSPTNTEVEMPN AVTTENLDHLIASSYHLAISGPTFAVIVHEYPELVDQLCCVCDVFARMAPDQKQLLVE QLQAVDYTVAMCGDGANDCAALKAAHAGISLSDAEASIAAPFTSKVPDIRCVPTVISE GRAALVTSFGIFKYMAGYSLTQFVTVMHLYWISNILTDGQFMFIDMFLITMFALLFGN TPAFHRLAHTSPPTRLLSIASMTSVIGQLIIIGIAQFTVFILTAQQSWFTPYQPPVDD EVEDKRSMQGTALFCVSMFQYIILAIVYSKGKPYRGSLLSNKPIYKKKRSIETIVDYV PSDHIRRPSMNGLTSSRTETTLLSGEGPQLHMTKTPKADEGQQSSSLFERIISRIGGE PAWITSSIPQSSSPDITEPEHLDRTF" CDS complement(join(666041..666161,666210..666991, 667040..667180)) /gene="Cbr-col-123" /locus_tag="CBG_03475" /standard_name="CBG03475" /product="Protein CBR-COL-123" /note="C. briggsae CBR-COL-123 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain) , PF01391 (Collagen triple helix repeat (20 copies)) contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /note="Predicted" /db_xref="GOA:A8WV57" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/TrEMBL:A8WV57" /protein_id="CAP24368.1" /translation="MQVSSATFVASSLSAIALLSCLFVLSTVYQNVQDYWTELDEQMV EVRKDMDDMWREILHIQSNALGSVFRARRPARGAYEEGDYKEAPPPAAYNPGYEESAA PAHDVGAQPPAGPAPTSPESCQCQAENKCKAGPPGAKGFPGLPGPNGVPGVDGKPGHD SQDVEPQSQNTGACFHCPQGPPGSPGPMGHPGPRGMKGADGQPGQPGKDGDPGKPGEI GPNGFQGKKGPDGIPGEKGMDGRKPIGRPGPKGQRGEQGHPGPQGTPGHNGPTGSAGD PGPQGGQGPQGEHGPDGGPGEEGKLGRPGPDAEYCPCPARGSHGGSSGGGGGSAGGEY KATGGDSYRKKKL" CDS join(671874..671905,672486..672591) /gene="CBG26400" /locus_tag="CBG_26400" /standard_name="CBG26400" /product="Protein CBG26400" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IFF9" /protein_id="CAR98639.1" /translation="MVGGSEEIVKLEYTTSRQRSIRPSNSPNTFSLPSFFYSIVFFLH F" CDS join(673011..673117,673540..673752,673803..673885, 673930..674069,674121..674291,674335..674493, 674599..674725,674771..674871,675238..675333) /gene="Cbr-egl-20" /locus_tag="CBG_03476" /standard_name="CBG03476" /product="Protein CBR-EGL-20" /note="C. briggsae CBR-EGL-20 protein; contains similarity to Interpro domains IPR005817 (Wnt), IPR018161 (Secreted growth factor Wnt protein, conserved site)" /note="Predicted" /db_xref="GOA:A8WV58" /db_xref="InterPro:IPR005817" /db_xref="InterPro:IPR018161" /db_xref="UniProtKB/TrEMBL:A8WV58" /protein_id="CAP24369.2" /translation="MQFSIFQLFLFVLLVYAQHIPLSGNQNSPQVPYNWLTLAFVGSN DYLPRPHYHSSDRDHFKELCRRLDGLNPNQQAMCAENPFSIPFVARGVREAIRECENK FKFERWNCSSRDEVTETRHGKFQDILGKTLRSSNKEAAFLSAIMAASIVHSITKGCNT GNLTECGCDSKPGMQRYQADSDSAMSRDQFSWGGCSDNVPYGIRYARRFLDEWEVQQF EETKNVAHLVRRHNNFVGREAIAQNIRRQCRCHGVSGSCEFKTCWLQMQKFSQVSDLL KKRYDHFAVQVELEDVTRKATKRLRRKERTERKIPLRGNEMAYVHRSPSYCERNLTAG ILGTSGRECIHNSYSSESCDLLCCGRGYNTRLEIRQTQCECKFVWCCEVKCKTCTEEV AVHTCK" CDS join(678166..678195,678709..678810,678857..679159, 680557..680887,681726..681911,681957..682225) /gene="Cbr-dct-15" /locus_tag="CBG_03477" /standard_name="CBG03477" /product="Protein CBR-DCT-15" /note="C. briggsae CBR-DCT-15 protein ;" /note="Predicted" /db_xref="GOA:A8WV59" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8WV59" /protein_id="CAP24370.2" /translation="MAFTKLSSAMKPIFDRIVEAKETASKHLSLFLIHLWIYALIGFS IAFISLSYSHSACFSMISSAHLFNLHFAFNGSIFLGAVFHSNLSRRLPLKYVFITCLV LICACYSSLPHAGNVILLLCIVFIVFGTVLGISLSAVTSNFGVLLHLTGAIGAVVAIT FYQSAPSTHQDDCNSKRNPVLRTGPHIPSLEKFYLNPSLRQDYIYYATAILQIPLILI CWRTEFNVLMKTSISIRRTEYDDIEHNNNNLHQENCHTNNTFTLLSGHCSGHLIFPLL LTFTTSTNSRLFIAFNFVAIVILVIILVSILSLHAQIERMQASQSGLNLFVSRFLSGE SLLKRTRSIRPLISRLRPNSYRRFANRRGLNTRSPSPAVPHSTEVSVGTDELSRLNEP KEIRSGSMLMPTRV" assembly_gap 679167..679636 /estimated_length=470 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 681172..681655 /estimated_length=484 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS 684911..684928 /gene="CBG26401" /locus_tag="CBG_26401" /standard_name="CBG26401" /product="Protein CBG26401" /note="Predicted" /protein_id="CAR98640.1" /translation="MFRNI" CDS complement(join(685590..685772,685821..686228, 686274..686402,686464..686781,686829..687006, 687055..687131,688220..688258)) /gene="Cbr-fat-3" /locus_tag="CBG_03479" /standard_name="CBG03479" /product="Protein CBR-FAT-3" /note="C. briggsae CBR-FAT-3 protein; contains similarity to Pfam domains PF00487 (Fatty acid desaturase) , PF00173 (Cytochrome b5-like Heme/Steroid binding domain) contains similarity to Interpro domains IPR001199 (Cytochrome b5), IPR005804 (Fatty acid desaturase, type 1), IPR012171 (Fatty acid/sphingolipid desaturase)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8WV60" /db_xref="InterPro:IPR005804" /db_xref="InterPro:IPR012171" /db_xref="InterPro:IPR036400" /db_xref="UniProtKB/TrEMBL:A8WV60" /protein_id="CAP24371.1" /translation="MVVNKDASGIRMRIGNKWVYMNEEAVKNHPGGAVIEQYRNSDAT HIFHAFHEGSSKAYKQVELLKKNGEHDERLERELEKRLDKGDVNVSVYDITVEQEKKM VESFERLRQRLHDDGLMTANETYFIFKSLSTLSIMAFAFYLQYLGWYMTSACVLALAW QQFGWLTHEFCHQQPTKNRPLNDTVSLFFGNFLQGFSRDWWKDKHNTHHAATNVIDHD GDIDLAPLFAFIPGDLTKYKATVEKAILQIIPYQHLYFTAMLPMLRFSWTSQSVQWVF NENNMEYKVYKKNAFWEQATIIGHWAWVFYQLFLLPSWPIRIAYFLISQLGGGFLIAH VVTFNHNSVDKYPADSRILNNFAALQILTTRNMTPSPFIDWLWGGLNYQIEHHLFPTM PRCNLNRCMKYVKEWCAENNLPYLVDDYFVGYNLNLQQLKNMAELVQAKAA" CDS complement(join(688998..689189,689679..689785, 689832..689923,689974..690335,690385..690735, 690785..690895,691242..691370)) /gene="Cbr-fat-4" /locus_tag="CBG_03480" /standard_name="CBG03480" /product="Protein CBR-FAT-4" /note="C. briggsae CBR-FAT-4 protein; contains similarity to Pfam domain PF00487 Fatty acid desaturase contains similarity to Interpro domains IPR005804 (Fatty acid desaturase, type 1), IPR012171 (Fatty acid/sphingolipid desaturase)" /note="Predicted" /db_xref="GOA:A8WV61" /db_xref="InterPro:IPR005804" /db_xref="InterPro:IPR012171" /db_xref="InterPro:IPR036400" /db_xref="UniProtKB/TrEMBL:A8WV61" /protein_id="CAP24372.1" /translation="MVLREQEHEPFYIKIDGKWCQIDDAVLRAHPGGSAITTYKNMDA TTVFHTFHIGSKEAYKWLTELKRDCPTQEPNIPDLKEDLIKGIDDVNMGSFNISDQRS AQINKNFDSLRMRVRAEGLMNGSPLFYTRKILETIFTILLAFYFQYNTYYFTAAVLMG IAWQQLGWLIHEFAHHQLFKNRFYNDLASYFVGNFLQGFSSGGWKEQHNVHHAATNVV GRDGDLDLVPFYATVAEHLNNYSQDSWIMILFRWQHVHWAFMLPFLRLSWLLQSIIFV SQMPTHYYDYYRKTAIYEQVGLSLHWAWSLGQLYFLPDWSTRIMFFFVSHLVGGFLLA HVVTFNHYSVEKFALSSNIMSNYACLQIMTTRNMRPGRFIDWLWGGLNYQIEHHLFPT MPRHNLNAVMPLVKEFAADNGLPYMVDDYFTGFWLEIEQFRNIANVAAKLTKKIA" CDS join(692811..692876,692925..693017,693076..693165, 693212..693313) /gene="CBG03481" /locus_tag="CBG_03481" /standard_name="CBG03481" /product="Protein CBG03481" /note="Predicted" /db_xref="GOA:A8WV62" /db_xref="InterPro:IPR003173" /db_xref="InterPro:IPR009044" /db_xref="UniProtKB/TrEMBL:A8WV62" /protein_id="CAP24373.1" /translation="MSSSSSSEDELPKKVKEHEKKNKRKSEAVDEPEQKKAKKEEATG RLKDSDGNEMFEIGNLRYATVSKFKGKEYVNIREYYIDKETQKMQPSRKGISLSKAQW ANLKDLIPEIDKKL" CDS join(693562..693832,693880..694130,694332..694532, 694588..694614,694639..695074,695120..695263, 695312..695604,695660..695902,695956..696077, 696124..696323,696376..696484,696536..696912, 696962..697177,697228..697317,697367..697545) /gene="Cbr-pis-1" /locus_tag="CBG_03482" /standard_name="CBG03482" /product="Protein CBR-PIS-1" /note="C. briggsae CBR-PIS-1 protein; contains similarity to Pfam domains PF12738 (twin BRCT domain) , PF00533 (BRCA1 C Terminus (BRCT) domain) (3)contains similarity to Interpro domain IPR001357 (BRCT)" /note="Predicted" /db_xref="InterPro:IPR001357" /db_xref="InterPro:IPR036420" /db_xref="UniProtKB/TrEMBL:A8WV63" /protein_id="CAP24374.2" /translation="MSDPLVKEEDMQHRPESPPLGLLDPSRIQNPLANEQIHQIPKQE MPQQQMPQQQMPHASGFVMPEQPRQQPPPQNWQRTPTMSPANIFQAGSVTPGSQRSST GTPNHPMGCPPQQQFFHGESPIQSQGAPMTPQSAGPPPGSNCGTPQSAGAPNSGGAPY DYQAAQMQQQQHAQAMAVAAAQQQSAQQQAAQQAQQAQQQQYVGQPNPQQMHDSPFRQ HPMMGMHQHPGHSAQYPPGYPPNLRECLIHKERVSQRALVSQSIRSVNYSLAYPAGMP GPPGPMTPVYPPPTPTANRTTPGSAGPVSGPPGTPQRPQYPQGTNPQPPPQPQFTYPP AQQMTPTGQLPGYPGIPGTPTFPSPAHQMYRQGPPTAPAGMPGMRQQYISPQQQPVPP GTPHRFAPQAAATSSPHFAPAPGNDLRSPSLMSPNQQQSQQHTPVLPRAIHNEMPPHP MRPVTLPSQQLPPPQGTPQPPLSATSVPPQSVNQFVYRQGPPPGQMHHDPFPVQMNSD PELFLAGFHFYCFDSDRMFQDKLDRKNLEFMIRFHGGEIEFEPSKFSEKVHQVTHVLI DSCRNPNVRQSLELKKRIISMQWIADVLEKEKADIPWKLAHLPPPFYGTFIPYLGKLF ALSGYDESERGAISFMVEAMGAKITPFFSRKNDLLIAKSPSEKVTKAQEWKVPVVNFQ WLADAYVCASGLPHVENPRYQVGQECQNVNGSPSQIEISSNEFAAMICCWKQPCIIGD QDYDKAQAYRKELQSNPYYFPAHKVSTQSAAPTDEEIEASVTSIEKKEQEWKDHMDKL KEHPIHKDLHLVPKPSPRVSAWFGDAIDEENLEILKKKVKFLGGKCVDKIEHATHVVM MSGRRSLALLESIIRGKNIVVPEWIVDSYKYKNWLDTMEYFLRDRDLEKEFAYNCKRS VLRARHKPVFEDIEFHVTRFVEPNQKDLIRLIELSGGKIHLNRPDPKYLAHCVEIEHP FIIISCHNDARFLSYLGNANLPIYNVDLILFAMLRQVVEPLPQFRIPIPIVVKPPRPP PYSDDKEASSAVSPTPMEVGAA" CDS 698339..698485 /gene="CBG26402" /locus_tag="CBG_26402" /standard_name="CBG26402" /product="Protein CBG26402" /note="Predicted" /db_xref="GOA:B6IFG1" /db_xref="UniProtKB/TrEMBL:B6IFG1" /protein_id="CAR98641.1" /translation="MTKELKMNEMKYQGMQYIQMDSCSLIYTFCSVTLFFFLSFQQVS DHLG" CDS join(698607..698759,699939..700087,700575..700752, 701280..701431,701481..701567,701600..701695, 701742..701778,702902..702992,703038..703221, 703287..703623,703665..703979,704033..704089, 704134..704222,704267..704393,704405..704517, 704567..704693,704740..704829,704879..704965, 705015..705165,705384..705523,705570..705706, 705750..705989,706039..706754,706801..706910, 706958..707185) /gene="Cbr-vha-7" /locus_tag="CBG_03483" /standard_name="CBG03483" /product="Protein CBR-VHA-7" /note="C. briggsae CBR-VHA-7 protein; contains similarity to Pfam domain PF01496 V-type ATPase 116kDa subunit family contains similarity to Interpro domains IPR002490 (ATPase, V0/A0 complex, 116kDa subunit), IPR019825 (Legume lectin, beta chain, Mn/Ca-binding site)" /note="Predicted" /db_xref="GOA:A8WV64" /db_xref="InterPro:IPR002490" /db_xref="UniProtKB/TrEMBL:A8WV64" /protein_id="CAP24375.2" /translation="MAMKKTTTGNQLRKTKKTKKMTEGATWRQMMNQLTITVQSMMTI AEIIDFSNINTTPQKWTSSPGETFQTLKFGIPNLHLDIPFGERLPKDFYLDLLRSSGT RHFKAFYSTDSLEDAVEFVNNFCGAENLLSLNLYLSCCEFSSSLLGAYHVGNILISFF FCSSMSSFANLGFVPPDGDDDIVTMRQRSSESFSAEDSFTDGSPDHRSNIQRCSQKKS KMRAPLLASTPRVICRIQRTNRLYFSILPYFTREPMFEPIPEFIEMSDNFNDVSENSQ GYRFFNTKEPFSRHSYRNWHRLNFDVLPKVSNFSRRVLARVRETLPAFGFASAEEEDL SIEEARQGQDDRREHIDLSEIFNDDNQIVNSQELAGGLGVSNLNFDKSLIEHDHLDFD STPQSAHDVIWLRDMSATTSISEPILHQSTKVTMTPPGKNPVNGLEITMTEKKTDEAS MFRSEPMKLYQMILVREAAFECVAELGKQGNVQFIDVSLNAKLSLYSRSFVKQMRRCE EMERKLRFLEKQVITCKPGLDPKSIDFSDLTAPTQAEMIQLEHKLDQLEKEFLDLNNN DYALRKNLNFSKEFLYVMRLVDDFFQVHKEEEAKARFERSATTDDMDLFSKSFGFGGL PSNDMPMTPLIGTDENAWFVAGVLPLDKKESFERVLWRACRRTAFVRTSETSFVVNDP VTFLLLTFLKIQLEPLQKCVFIVFFKGDSLRLIVEKVCDGFNATQYPCPKTSKERKMK MSETEGRMNDLTVVIDTTQTHRYTILKDLSYELPVWLKNIQIQKSVFAVMNMFTVDTN GFLAGECWIPAAAEEDVRTALHDGFKASGTEVEPILNELWTNAPPPTLHKTNKFTNVF QSIVDSYGVGQYREVNPAPYTIITFPFLFAVMFGDAAHGLILLLTALFFIRNEKTIEA KKIRDEIFNTFYGGRYIMMLMGIFSIYTGFLYNDAFAKSFSVFGSGWTNSYNETTLDS WMKRSNESKREFALELVPELAFEKENTYPFGVDPIWNVADNRLSFLNSMKMKASVIIG ITQMTFGVFLSVLNHTHFKSYIDIVANFIPQVIFLSCIFIYLCIQIVVKWLFFTVNAE NVLGYEYPGSHCAPSLLIGLINMFMFKKRNEGYYDKNGEVFRNCHLGYWYPNQVRTFS KIEKMSYISILQRLVETVLISIAIACVPAMLLGKPLWVRFVTSKRRRLQETRSVKGLR RNGTTVSAPTSPITDIGPPKFVQEDAELLLADELDIGDDIHHSLTDIFVHQAIHTIEF VLGCVSHTASYLRLWALSLAHAQLSEVMWHMVLMQGMHAADHIGSERVVSFLQPVVAL ISFFIFAILSLSILIMMEGLSAFLHALRLHWVEFQSKFYLGTGHPFHAFYLKESLENA QLITEETDRLADISRGQH" CDS join(709848..709976,710778..710995,711041..711253, 711652..711784,711837..711983,712032..712114, 712163..712217,712297..712410,712455..712672, 712719..713126,713379..713434,713576..713874, 713923..715116,715163..715300,715543..715697, 715743..715884,715931..716029,716079..716605, 716653..717854,717904..718016,718066..718572, 718620..718901,718951..719569,719617..720298, 720344..721172,721219..721727,721775..722138, 722186..722817,722999..723095) /gene="CBG03484" /locus_tag="CBG_03484" /standard_name="CBG03484" /product="Protein CBG03484" /note="contains similarity to Pfam domains PF02138 (Beige/BEACH domain) , PF01363 (FYVE zinc finger) , PF00400 (WD domain, G-beta repeat) contains similarity to Interpro domains IPR000409 (BEACH domain), IPR000306 (Zinc finger, FYVE-type), IPR001680 (WD40 repeat)" /note="Predicted" /db_xref="GOA:A8WV65" /db_xref="InterPro:IPR000306" /db_xref="InterPro:IPR000409" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR011011" /db_xref="InterPro:IPR013083" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017455" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR023362" /db_xref="InterPro:IPR036322" /db_xref="InterPro:IPR036372" /db_xref="UniProtKB/TrEMBL:A8WV65" /protein_id="CAP24376.2" /translation="MESRDERTLSLLHLRKTFSEYLKIPVSGSRSNDPSRLLPLFHKV MSMYTPQQLVAEFKEVVHFATFLCSVLVKEVRQRAASTGTIEAAQSIAEFLRPGTDLK GFSILDAIRFLLSSDDEVMIDAACKVSLPSTLVKTIYLFFDLPNVATVTPENSESSSE SEDSIRINNEKLFDMISQIMEGLCKFKCVSEELVRKDDLLLLFVGTTSQVADANNCWR KLCSRLLEVIADKSITNAVIKYVIVKKCVRIFVKNLSSAPATSHSDSQKTAESIICLA CFLKNSAYLTDQLLDEFYEADGYTVIKDFLLRNEADNEIVRNILIMTISLYTSGLVQL PSFQLPIPAGNGLSVRNLNAFALLYHVFLESSSEATSCTVIDILHSIYTCDPANYFIL DREYPLSIFIDQLERKQHSVRVKLLELVEFAVFQLNHIPCRELISLCVLLKTEISAGK TAMCTIIVQMCFKLITVDAIIKVRVLRFQVFSIFGILKDAFREVGLLDALCYIIRRMY EMYEKSGQASSFTATSTNSRTQDQLKLSLLTTDLLTIIIKNNTENGKLFTECFGAKLL VEIVCGESQRGMEKFFIAISQTTTDLFSRYGSTNFSIFILNIQALLGVVRESHKVRIQ FRKSGGFLALSALLLGLEKRFADVQQRDDGRIPMEHCQMLEFVHIIFKVFTLSMRFEP SNAKYFSTEITWDSITSLLRLTCIFNESTVISIEEPEWKTLTHTDLASEILACHEVFR LDDSIEAGNVPKGMPFSIYFGCYVCRLIFNMALDNYEKMTTDIRWNDDRASLEESIVS WTSSLLVHPGAIISMLCLLPSISSSPSSTSSPSPEATKWTVAAQYYVSLLLKAILKSE RNQQIMCQVDMPKHLLRIAGKLFLIENHVLLQSFYYLLERLSYQSLTPNQLRSFLRLD SPLCCRSLDDDDEDENGNEVANNEGGPVPLQRVKALVSMMTPRDQYVGTAPSFVEFDM SVEGFAALYLPSLAPMFSTTKTERIFPPLNGFSFCTWIYLDSLSDKKADAHPIRLITI TRAVAPAAELSSKKAPQPTHLACFQCQFSAIDRSLLISTEESDQPGADLEKIANFQTD KLIRITLADQVRCGEWFHLAVVFNRSVLKSSQVSNCILMNEAHSFSIVSVYLNGRHIS TQKLMYVAQNAGGAATQLAQTYSVNAAVGTLPALRRPSRLRFRLASIFLAEEPMTAET VRAIVQLQPHYIGNFQTASAERTPLFHEEKIVFSLSAAATQELTLAKIRTMYGKMDAE ILSQHLGISSNDHSTPLRVLCNTISHAPGAGRTFGGVIVGYLGMRTFTPRPVPSLLDS IGGFASVYGLIAMAVDSEGLYASLKSLVSAIRSQPRLLATWNNNRSYQILAVLLEDKA NMLNSHIMHMVFNVTGTADTSREHAPTISNPSAFEDLLCDLKVWKEAPSELHKMLLEH FYELITDHQLNNLQVVRRSSLLSRLLLIIHDEPSMIQNTDEIVFNLISAIIQPQCDSR SILKVGQCIAATLPTSEAECYEDSHLPFHIAEIQKMYLELTEDPSEALHNVYIRNRLL NIIANFLSNSNAQVQQQMCEHIVRTLGFDWLFALMSPGVHSGTIYLALRILLLILNQP SLLARFKEGSANGGWLSEADSVVRNRAAVVLGFSVSAHGGAVGSKIDINPELSNCGGF AALEHLMGAHADKPYPYYAMLSILVGQPIPALRYCFWKLLKYKIFFSRFCDQFNMELV WTHVFGLSSTSSVFEAINSANFCFDALIPLFAMIRTSIYHQSTIHQQWTITNPSTVIQ MITFMYQNSPAFFNIAHSDEFVLALFSTLIEDTNAMGVKSEIANRRSQDGSPDSEYFQ TFLTQPNVKIVMDLLKKIFSDNLQLNSSKNDTIIDVILDNISESGITRKAQVACLTSL LHSVLEHAVSTDLLASSALPPNTQPQNLVQIVSNISVLSSRAVDAFWNGLVFGSESMR MLSTLYHLQVIASKKVNKAVNAEPITGCIMRMTLFILSRPIDSVPVQLSVLDALSSLV SKRYLFLASNEAWFFASLTHLIFMLSVTPDVLFQDNSSDLDRTSAQVAMCACRVWSDV ICAKQGLIEETFKKQSVTDINAARALLSHSAGVYWQQFVDSQLRTIQTGGSAAQSGSY TTKDIIQQQISSKFNRVASGITRFAAKRSMSTTTALPSTGPGSVAAWKNTSADKQVIF MWLRVHVSLIKELVRAQSTRYTEWHAHVRKWCLHDWHQWEAELTRERGIWGPERASKL EKFKLDLTEGPTTRMRRKLIPNRNFYHVYPFRPHLEAPTAKAQRAKVAISLDSKLYYE ACLIHRRRTLDTRIIDSSSVSILSPDDGSGSSSNLLGYSFTDLSQINSSLIRRLSTTA PTTSSQNTTGTSIELNEEECETLERKDDDDSTSSISEKLPSEANGVSPQQSNQSSASA SNNSGTAHKKEERKEEKKAGPDNQTLLRLLEQGEQLHSMFRCARIQGLETAEGLLLFG RDHFYVVDGFTLLKTKEIRDLDFLSQEMHDPIVPYPATGATQPPKSSRLCSKFSYNMI REVHKRRYLLQPIALEVFSSDGRNYLLAFPKKIRDRVFDKLTSMAINLSSGGSDSLGG QKSNVAIETTGRGASLLSSLIGQQSVTQRWLNGNISNFQYLMHLNTLAGRCYNDLSQY PIFPWVLADYTSPQLDFTNISTFRDFSKPMGAQSPDRLEQFLKRFREWDDPSGETPPY MYGTHYSSAMIVVSYLVRLEPFTQQFLSLQGGHFDLADRMFHSVGDAWTSASRNNMAD VKELIPEFFTLPEMFTNSNRFDLGVKQNGIAVNDVLLPAWCHGDPREFVRLHRQALES DYVSSHLHEWIDLIFGFKQNGEESVKNNNLFHHLFYEGSVDFERIDDPLTRNATIGFV NNFGQIPTQLFKKPHPQKKVNILEGFSNTPGVTTSRLFYHAIHNMTPPQSPFKELRSA VGSIHQNDKIGVVALEQNKVFIGTNRYITWGLPDRSVRMGQIDTDKSVCVHEMCEVDE MTCAAAGDETTLFCGNTSGCITVWKVKSKPLSMKKLSVLNGHSDAITCLVSSQSHAVL ISASRDLTVLVWHLSEMFLIRQLPKHSHAVLAVAINDATGDIATACSTLLRVWTLNGE LLAVLNTCDVAPAIDPQQMIISLAFSTMNEWDNDNVIMCGTSDGIVKIYSCVVFENDG SVSENPVLESTNMIMNMEDRSSGSAIIAARLEKQRKRLKNSSTTATSSSISGSGSVSV TSSGPASPSSGNKATKSEDGGSQFVRVLVQRTALTMHTAFNRPDNVHPAPITAIAPSR DHRSLYVGDGIGRVWCWQGGEGGGRADHWVQDVMRQRCDDCEHKFTLADRKHHCRNCG QIFCSTCSRFESHITRMNISRPVRVCRKCFLRLQQSS" CDS join(723501..723698,723746..723856,723904..724008) /gene="CBG03485" /locus_tag="CBG_03485" /standard_name="CBG03485" /product="Protein CBG03485" /note="contains similarity to Pfam domain PF00472 RF-1 domain contains similarity to Interpro domain IPR000352 (Peptide chain release factor class I/class II)" /note="Predicted" /db_xref="GOA:A8WV66" /db_xref="InterPro:IPR000352" /db_xref="UniProtKB/TrEMBL:A8WV66" /protein_id="CAP24377.1" /translation="MILKWAMFRRTFATPRQKLKGYKFPEVKKDDCEQKYISGWGPGG QKVNTAQNAVQLTHRPTGTVVKVHESRLLPKNIEIAFERMKVVLDRQINGDNCYEEQL KRLQQAKEVKANKKRDQARKEKKVFKKELEEKNFE" CDS complement(join(724384..724560,724610..724962, 725014..725230,725278..725440,725488..726048, 726160..726526,726571..726742)) /gene="Cbr-prmt-3" /locus_tag="CBG_03486" /standard_name="CBG03486" /product="Protein CBR-PRMT-3" /note="C. briggsae CBR-PRMT-3 protein; contains similarity to Pfam domain PF05185 PRMT5 arginine-N-methyltransferase contains similarity to Interpro domain IPR007857 (Skb1 methyltransferase)" /note="Predicted" /db_xref="InterPro:IPR029063" /db_xref="UniProtKB/TrEMBL:A8WV67" /protein_id="CAP24378.2" /translation="MSGTSGEQGQFFSMEIANKALVDGNFEEALKHFFVCIKMLPVER RGRYEDQFAAAIHGWITQSSEHAARAVNLYPQIRDLFPETVRTKIAIVKAVQISGQGK WLLNCLPIVKEAMALTTNPEDRAILRIARVNLTTVPFPQWHIRMVNDTVRIDDVVLKT FDTSDAERIFPPSIDCQYQKMSNLVIALEEDVCLAMISKEVLKRNKVADRVTVHAKNS MQFETSQNADVIVSETMDCCCFGERIIETFLDAHVRFAHENTIFIPQKATVYVRLFQC REIFDIHCQDYSGIRYRSEYVKINDEPTEQPYWCAAREDYAEFEFLSPPEELHTADFS RLDVLQKSLRCEGSTKLKPKKKGVAHGFTIHFVADLTGTGVLVDSGDCHAWDYGVVPF KEPCVVDVGQELDVSWKLVNNRLDVYNNFYSEKLQKAGSLIQYQTISMDRLHKIRDDS YFKQMMAEITINELPFTEDISFCVPAECVLKTYPNKEPTGTIIAGFIRHDGSLNQDNM FRIEQCVGHRDFVKKIVPSQVRIYGHLFYSDYIHFDARPDPTAHCKVDLATVRNFNLR EMRDIRLTQRNDIVLASEEFEMIFFDNDPNNYRNDLYETVTKEITVQPNLGAADGVLY EFEVLGVRNSKLRPVAAFLFQDRIRTGDQPASISKKIPEYYSIPL" assembly_gap 729735..729836 /estimated_length=102 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(730511..730723,732568..733024,733075..733595, 733645..733980,734059..734180,735549..735792, 736251..736406,738847..739040,739091..739184, 739233..739497,740145..740385,740429..740684) /gene="CBG03487" /locus_tag="CBG_03487" /standard_name="CBG03487" /product="Protein CBG03487" /note="Predicted" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8WV68" /protein_id="CAP24379.2" /translation="MIRQESSDYLRQKQAQWEKEKGFLFKNLSLFLAKFPFSAESESR PEWFPFGENLTPGGGSPLRKFVPKEPVESSTRKISEEASTSMHSIETTTSPDRKQSDD VNSCQHNQHYHAPPSLPQHHPNSHHPYSYPMYSFQYPIAPFHHQMTASVSSCGEQHTN QHPQVFAPHYQVIPAGAIPVSTIVRDPSKSTPYSKVQSIDPSQICPVDQMGMWTLPPP TGPNGMRYGIPIPAPLVPQITASIMESSKMTSSMNNTILNAMTSSTSSNDSSSESGVS GVKESKEDKKKKKDNVEADEKIHREERQSTSDYTGNNRNSVLIFFLIFEDDDPIPLTR RSTTGSITYNYADQIAERRKFEQEQEDRERQELLEVERQRRILEDRRNSEEETRKRAD RERIEEEQRRADQFAAAMEKAKKEAELLKRAKLYKHVLRGAEEEGGTEQLSELEQKLL GVDIETGRRLLKEVSEVEWHKKQDEVEMKKNAPQPEKQSHNISTMSIGNQSSRGRSSS ISSPSKQDSSFTRNSLGRRSVRTTSREKQGYSVEKDQNQTARSDPLLPPQQSPAAPVS LESRPLALPRQNECHVAVSSPVQGALPGNRELPSPSEMMLNSGSYYCPMNRDPLSHRE ESRAIQKYVFVVNFVFQYNPFRIHTQEISNFQPTNSSGAYYNNNHSKFDGVGRRSNET TQSALFGPIATRSSIRRGNMRGTGLPSPPSVRMTQTHKSQIRTSSFEESSSGGEDGGS ISPDLNHKNFGSPLPSSTENVHPAPCSPPNKSTETFEFKTPSRARSALSSPMNNFLNG GDNDSPTSRPASRLMQRLEQKGTIRRDDEIISQEIRRVAETNLSRSPSLASLRGSIQN LSIRGSHLNLAEIRTSDGVEFHNAVNVVGQVMLYELLQNEIKRAIFLSSATVRMACYS RDLNFLSVYAGPYQAYASSKLNLAVYVNEVSRKRHVTAVSLHPGTVPGHLYHNANPLV RYLNATILPKILRKPEMAAILVLHTVLREDIQPGAYYEDTEVVNLADCIPEQVSVMLT YI" assembly_gap 739535..740140 /estimated_length=606 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(741001..741213,742379..742662, 743209..743464,743508..743837,743889..744275, 744325..744650,745401..745512,745562..745633)) /gene="CBG03489" /locus_tag="CBG_03489" /standard_name="CBG03489" /product="Protein CBG03489" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WV70" /protein_id="CAP24381.2" /translation="MSQLVKQISVFTTAEQYQKIIHQLLGQLSRTRETVADEAAVENN ILIIRNHIEQLLEKRFVVLASPELGDDEFEDEWNVLVWGLLVCIVRLPQTIEKDSTTE SLNLYLIRLINMARPLRLPKVSVEREQWWNQFFDQFNNLLHFLHGLLSQLQNPNCNVE IKMRAFFTRQLRPCLAAFRRGCVENSPLLHTELRRVQVENLSNHGKLLEDDLREIKKY YSSLTYILGILAIRIQGLRFECQSSSTNMYATPDTLWQLLQEVMMTYEQVMNDALMCN EPSGSPIMVTNNLFTFTCYSLNKTLFYNSFDIQIVSEETAAAIQNEIIQCRMGSSSPK EPKLFPSAALIAMKPTTGVKRNNATANQKGTGGNTAHKKSDVNSQEFVTIPALFSEPD RAFQTTYPHLLCTTRQKDAVLLDTKSGATGKRPLFYFYIRAKTWSPSGDDFYVRTLSL PFTISTRRNQDCQVQRMNSSYTATCFWMYGTCSFNGLLLNWNENPLTWTQFKELTRRY FMVNGEVKRTMEESDYALLEDKMHCEQCGDDTDDQHGENCISFKNILCSHLRFDTDTV QMRFSVWRGILEVLQIFQDPKAAVVETVSFAARTSHHHLEMLPPHNPNLRSASSLVPD HNASFEEFMDDLTNSSNDDYIPSLDFSHTNHSLRV" assembly_gap 741340..742339 /estimated_length=1000 /gap_type="between scaffolds" CDS join(749055..749276,749350..749493,749538..749648) /gene="CBG03490" /locus_tag="CBG_03490" /standard_name="CBG03490" /product="Protein CBG03490" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WV71" /protein_id="CAP24382.1" /translation="MQYPKQNAKLFALLLLNVAISSASIFSSSDDTSSELPSSTTAVA IRAKRQCGGMGGCCGGMSGCGCGSMGMCGQTCCPSAPPPCTCGTPGCMQCVQQTVLVP VTTTTCCKCCQPVCTNACTNGGGCSCGCTRGGCSRKRRSLLAIASEEMSKRGDVMV" assembly_gap 752230..752347 /estimated_length=118 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 754821..755275 /estimated_length=455 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(756242..756323,756764..756944,756991..757078, 757122..757421,757465..757599) /gene="CBG03492" /locus_tag="CBG_03492" /standard_name="CBG03492" /product="Protein CBG03492" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WV72" /protein_id="CAP24383.1" /translation="MLLLHTHQLSPFIFLLFALVIPLVKAKAPYLRDRPRGLGLLQLP TGMSDERSGPILPGLYIAGNKVNEKPQTVPDVHLPGQPAVFSGRSAFNPFTHMVSAVY AEDLSDGWGAGMAVNGVNNHGLNVRKNFDSYADVPLNLNDGMYQPFISAFTVGGEYDP SKIREVSGSLDLPIPGINELFDMNGRIMTKHALIVNGALEFPLTLSDPNERAPYTFKY AVWAPDRHMAYGHVMPNVNLFVIGKDKIMERLMQNRLNPTMIG" CDS join(757939..758160,758214..758499,758921..759141, 759188..759785,759833..760505,760552..760747, 760797..761234) /gene="Cbr-rbd-1" /locus_tag="CBG_03493" /standard_name="CBG03493" /product="Protein CBR-RBD-1" /note="C. briggsae CBR-RBD-1 protein; contains similarity to Pfam domain PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) contains similarity to Interpro domain IPR000504 (RNA recognition motif domain)" /note="Predicted" /db_xref="GOA:A8WV73" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR034418" /db_xref="InterPro:IPR034423" /db_xref="InterPro:IPR035979" /db_xref="UniProtKB/TrEMBL:A8WV73" /protein_id="CAP24384.1" /translation="MTTRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRG FAFVGFLDESSASNAMAKSNQTFFNSKRLTVEECRPFGDANKPRAWSKYAKDSSAYKR AHGEEGTSEPRQSHGTGEPEAKKQKNDEKFDQFMEAKGVTVEKEVKLSKDKSAEAKKL MKELMEGVEGDTSLSLIFSGLPSSAKGKNIKEWLNPIRVKAMKIARNDDVAAAFVSFN RPPDVRRALQKDGQFLGGFKIAIEKIETAEPEKEHVEEHGASLESRDKEEESVREKIL ETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVIIDKKTGSCKGFAIVEFVFPEAAV AAYSALDGYVFKGRMMHILPGDEKRDTPAEDQETVETAPDDPDNPTKAAVKKEKKKKT FKDEKEEEKKASAGKTAHSWNALFLGANAIADTLAQRLNVKKSDLLTSDQGESAGVRL ALAETRLVRETRDFFLENGVKLDAFSKPAEKRSDTVMLAKNLPAGVETEELQRMFEKF GDCQKVLMPSEGGVSALVIMGNPVDAKKAFRALAYSRFRSQPLYLEWAPYDVMGATEQ PKEEEQEKSEDYTKPKKSKREMTYEEKKKERKNRQQGITETEEDKKLDEDEVEETKES EPVEKKKKKEKKQPEREIESGSAIFVKNLAFDTTDDGLGSLFRKRYGDLVKNAQISKK LNPAEPTKPLSMGFGFVQFYTALDAKNALKEMQGELLDGHSLELKISHRENVDKGALK RKDVKQKEQGECTKLLVRNLPFEASIKEVETLFETFGAAKSIRIPRKPGQKLQHRGFG FVEFISTDEAFRAFDSLVHSTHLYGRRLVLEWAKEDETVEELREKTAEKFSGNKKGSK KSKAQTEEFQQQLQIADDEKD" CDS complement(join(762197..762463,762511..762679, 762790..762907,762952..763057,763107..763223, 763270..763357,763400..763544,763586..763700, 763752..763924,763971..764084,766465..766564)) /gene="CBG03494" /locus_tag="CBG_03494" /standard_name="CBG03494" /product="Protein CBG03494" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8WV74" /protein_id="CAP24385.2" /translation="MKRWILIFYTIFILGKFANSQPQPPQQLQVCLRDIEEDICPQRE GYDAECDTRCGQLYPMRIGSGCRTRQTGQLLSFFGIRSFVCTCHLSPIACANPQFAVH PYHTLVVQQHSHLNPIQQLPQNCGSPMPASLSCRDASLCSSWQYSREFEWYSGRPNVL ARPRELPVGEFLAGTSQQGATWATISTCDALCSTTSVNLTAKVWRPPTVIVELCFKEK ETTMCAPVHASNGHLINEIIPETNYFQVMLRFSNVTAGEMILLDDLKIDYQPCQKKSK SVAATVLSTNVSTVTLKSGGLPITLINPNKGDPRMVQHRMCQDGECEHKPHHSAFHSS TAKMCVGRPGLAYCRQKCRALDASELSAKCLRQRENPLIKKCICHVRRSPVKRIEGGV IEPTTVSREVEMNRVLADDVTSMTNFPPSATTVVTESPSTTTKVVMMDIQNEEKTEEE TAKIIVLERPKHPLRCEETNCNFEKDTKCGWADLRMLSRHFNNISVAMKRGDG" CONTIG join(CAAC03000541.1:1..12240,gap(714),CAAC03000542.1:1..10750,gap (104),CAAC03000543.1:1..9411,gap(479),CAAC03000544.1:1..44947,gap (628),CAAC03000545.2:1..1082,gap(26),CAAC03000546.1:1..26645,gap (415),CAAC03000547.1:1..18461,gap(404),CAAC03000548.1:1..68200,gap (10),CAAC03000549.1:1..47352,gap(4956),CAAC03000550.1:1..18959,gap (54),CAAC03000551.1:1..11564,gap(256),CAAC03000552.1:1..33025,gap (198),CAAC03000553.1:1..1545,gap(443),CAAC03000554.1:1..17443, complement(AC084610.1:30973..31505),CAAC03000555.1:99..5050, complement(AC084610.1:25478..26019),CAAC03000556.1:1078..36268,gap (220),CAAC03000557.1:1..544,gap(599),CAAC03000558.1:1..21152,gap (447),CAAC03000559.1:1..19886,gap(147),CAAC03000560.1:1..18450,gap (4157),CAAC03000561.1:1..30516,gap(484),CAAC03000562.1:1..10016,gap (93),CAAC03000563.1:1..56452,gap(10),CAAC03000564.1:1..13207,gap (644),CAAC03000565.1:1..41490,gap(51),CAAC03000566.1:1..47909,gap (220),CAAC03000567.1:1..4395,gap(100),CAAC03000568.1:1..36448,gap (470),CAAC03000569.1:1..1535,gap(484),CAAC03000570.1:1..48079,gap (102),CAAC03000571.1:1..9698,gap(606),CAAC03000572.1:1..1199,gap (1000),CAAC03003424.1:1..9890,gap(118),CAAC03003425.1:1..2473,gap (455),CAAC03003426.1:1..12124) //