LOCUS HE601046 907462 bp DNA linear CON 17-SEP-2015 DEFINITION Caenorhabditis briggsae AF16 supercontig from assembly CB4, cb25.fpc4023. ACCESSION HE601046 CAAC03000000 CAAC02000527 VERSION HE601046.1 DBLINK BioProject:PRJNA10731 BioSample:SAMEA3138181 KEYWORDS . SOURCE Caenorhabditis briggsae ORGANISM Caenorhabditis briggsae Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 907462) AUTHORS Howe K.L. CONSRTM WormBase Consortium JOURNAL Submitted (03-OCT-2011) to the INSDC. WormBase group, European Bioinformatics Institute, Cambridge, CB10 1SA, UNITED KINGDOM. REFERENCE 2 (bases 1 to 907462) AUTHORS Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R., Waterston R.H. TITLE The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics JOURNAL PLoS Biol. 1(2), E45-E45(2003). PUBMED 14624247 REFERENCE 3 (bases 1 to 907462) AUTHORS Ross J.A., Koboldt D.C., Staisch J.E., Chamberlin H.M., Gupta B.P., Miller R.D., Baird S.E., Haag E.S. TITLE Caenorhabditis briggsae recombinant inbred line genotypes reveal inter-strain incompatibility and the evolution of recombination JOURNAL PloS Genet. 7(7), E1002174-E1002174(2011). COMMENT Details of C.briggsae assembly version CB4: To improve upon the C. briggsae nuclear genome assembly CB3, 167 AF16/HK104 advanced-intercross recombinant inbred lines were successfully genotyped at 1,032 single nucleotide polymorphism (SNP) markers. The resulting data were used to estimate high-density genetic maps. Sequences were assembled by combining the physical and genetic positions of the SNPs to inform the process of ordering and orienting the cb25 supercontigs into chromosome assemblies. 37 of the cb25 fingerprint contigs were split into 100 supercontigs to resolve discrepancies between the physical and genetic orders of SNPs. 638 sequence supercontigs comprise the CB4 assembly. The total nuclear genome content decreased from cb25 to cb4 because of the removal of three supercontigs containing mitochondrial genome sequence (totaling 20.1 kbp). Assembly_name: CB4 Assembly_program: Phusion Seq_technoloy: capillary (whole-genome-shotgun) Seq_coverage: 10x Annotation details: Coding seqences below are the result of integration and manual review of the following data : computer analysis using the programs Genefinder (version 980506; P. Green, unpublished data), FGENESH (Salamov and Solovyev 2000), TWINSCAN (Korf et al. 2001), and the Ensembl annotation pipeline (Clamp et al. 2003); similarity to other proteins from BlastX analyses (http://blast.wustl.edu); sequence conservation with C. elegans using Jim Kent's WABA alignment program (Genome Research 10:1115-1125, 2000); individual C. briggsae GenBank submissions; and personal communications with C. briggsae researchers. tRNAs are predicted using the program tRNAscan-SE (Lowe, T.M. and Eddy, S.R., 1997, Nucl. Acids. Res., 25, 955-964). FEATURES Location/Qualifiers source 1..907462 /organism="Caenorhabditis briggsae" /strain="AF16" /mol_type="genomic DNA" /note="supercontig cb25.fpc4023" /db_xref="taxon:6238" assembly_gap 1685..1826 /estimated_length=142 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 3203..3279 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 6109..6975 /estimated_length=867 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 7515..7669 /estimated_length=155 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 8539..9538 /estimated_length=1000 /gap_type="between scaffolds" CDS complement(9542..10036) /gene="CBG15593" /locus_tag="CBG_15593" /standard_name="CBG15593" /product="Protein CBG15593" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM30" /protein_id="CAP33705.1" /translation="MEVEDQSEGGTERDASEEADVQIQEEEGDEEGGEISVGNTLETR EGEETEVQKLQAKLYAAERKLVEERNHRKEELAEITKLHQSLVAEKEELRLKNLTNQA KIKELENQHWADRKEVEDLKKMMDRDVIAERKKNDALQAAIAEAEKFFEMGRNCLKEE KKRQ" assembly_gap 11806..12805 /estimated_length=1000 /gap_type="between scaffolds" CDS join(15538..15590,17451..17504,17636..17808,17856..18113, 18160..18371,18421..18516,18562..18723,18770..18796) /gene="CBG15591" /locus_tag="CBG_15591" /standard_name="CBG15591" /product="Protein CBG15591" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8XM31" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="UniProtKB/TrEMBL:A8XM31" /protein_id="CAP33706.2" /translation="MDARWFPRVPPNSRDDEDEHFQDSYYNQYQIERHPRKVFLVQST TSNQNYAMKTSIRRSKDDRIPRSILKEVLMVHHMEHKNVISFIECFSTKNEEGHTIFH LVFQLCSFDLNHLLHIAGAPLTIGNKRTLTRSLLAGLEYTHSKNIVHRDLKPHNILIS ETGRLKIADFGTATYYVFETPQKLSPTVGTPGYVAPELLLGSENYGAEIDIWSAGIVV AEIILGEEVIPGGTTRGQLNSIGRVFGGQPLSKWVRWGQFPLLQRYSREVTYSERGSI QNKLDQLPDTEKVNGARLIKKMLQLCPRKRVKACRAQTNSWFLTTPPPAETIPEVVRA VMTQRDVLRR" CDS join(20462..20613,23757..23920,23967..24218,24276..24514, 24568..24789,25630..25778,26442..26566,26612..26751, 26793..26888) /gene="CBG15589" /locus_tag="CBG_15589" /standard_name="CBG15589" /product="Protein CBG15589" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8XM32" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/TrEMBL:A8XM32" /protein_id="CAP33707.1" /translation="MPQNEFVESDVEMMDIENSELEYHQTAERISKKTAMKMFEVLKT LGRGSMANVKLAVHKSECIVALKEITDKALRKIKVRGLNECKNLLEIEHENVIKMIAS IANTPFNRSPFLVLEYLYMDLEALIYGGRTYKLEHIKTMCSHMLRGVDAMNGKGLVHL NLQPSHLMLSNNGIFKIADLSIATKIPANGKAPEIKEFGALHYRAPEILAGKVENLVK TDIWSVGCTLGELILRRKVFEGENEDVQLRLIQNGAFSYLFRITLSNPLLRGREAIEM AIRLMKVDHGERPSASEALRMEWFENNLQPDVSDLLKTYEVRTIIIQNTAFPLIKAHG LLFFNFFLRTFSKKNFHTRKRAWSWSHRKSRQILKLPKTFPKIHFFRKRLKNKIPHNF RTANSHLIFADEIVEKQISAIQKVAKTADFNELLTLVSSSVFELEDGEEVRKALLAAK IKILKAKFHHPGIFATVLENDIHLSNITMRRHEKSSTGWILVRAGFLECIMNQDEDSF CIED" assembly_gap 22126..22228 /estimated_length=103 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(27514..27623,28064..28408,28976..29089, 29963..30223,30337..30448,30497..30640,30690..30861, 31334..31474,32044..32167,32221..32320,32362..32652, 33321..33557,36190..36282)) /gene="CBG15588" /locus_tag="CBG_15588" /standard_name="CBG15588" /product="Protein CBG15588" /note="contains similarity to Pfam domain PF03166 MH2 domain contains similarity to Interpro domain IPR001132 (SMAD domain, Dwarfin-type)" /note="Predicted" /db_xref="GOA:A8XM33" /db_xref="InterPro:IPR001132" /db_xref="InterPro:IPR008984" /db_xref="InterPro:IPR017855" /db_xref="UniProtKB/TrEMBL:A8XM33" /protein_id="CAP33708.2" /translation="MENGVSRSSLVHGTQTNPNSDTWYDTDAFLLDQVKEVLNKLSEG SIDDEIWGKIVIMERCKRVAKAYLRKTTVIIDGSEDEFDGKTLGFNHFDNPTRDDHTK EIRAKIADGVILKMDYQGNIKGMARGAAPIVCQGWKEPRNNCISDRVVRLHGKLNHGV TEDEKAYKVFDMRKFKHALERELHDGTPDARSLLLKTCMRIALVKVGDGADMNRTPCW FAIVNLVALDMIKEKIPAIKSLLNGSSLPIMTSPPPSVGNDPSGLDAQYLTQIIAAAV TQANKGAPTPVNNNNNQNLTISPEQLAQIASTISIAQTNTLRTADLAKKERPKKPYHC STSSLDSSGEDSSGRRSEASIAIKSRAKRWEQMQKINEREKYTESPDLKILDKPRPGG RAHRPSLQDVIFTRSHSITSDYDSNKEHFDSGSWSSTQSRYKGGRSTSSSVVSEHELA ALARDELKETSEIREANAVSEDDEPPTNPPSPAPVVNVPTLPRKDYNSSPTTEYATRN VIATPAEQFVPTLEGAPVWKPRTVAIESEHSPPPITATPPPLPKTPQPNNEGASPAPQ RGDGSLLRPNPGPVRSSTQPIKPVRQRTPSGSRATNEQFTDRAQPLSTSRSSSQLATV RRQRSPNPPLCFPTVQQRQQQLQQRAQHSGKSPFTVRRVFFAPSASRTSEDTAVPAPT PAAATTTRPAAITTISTTPSTVQLRPIYSVSRTSISSPSQPHGIPAMGTISTREKNPH VISLQLN" CDS join(48577..48651,48708..48830) /gene="CBG27922" /locus_tag="CBG_27922" /standard_name="CBG27922" /product="Protein CBG27922" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJL4" /protein_id="CAS00094.1" /translation="MSDLCNGFEPQNYLKERCKKCFRPKDKHVEEATVTLSALKKERR RSWKASSNLDNGGPDDGGLGR" CDS join(49240..49296,50225..50408,51367..51530,51970..52035, 52144..52308,52402..52542,52588..53016,53558..53713, 53762..53856,54335..54439,54492..54697,55566..55699, 55977..56264,56424..56936,56984..57178,57196..57427, 57718..58067,58103..58240,58520..58882,59386..59609, 59657..59809,60030..60158,61083..61168,61215..61525, 61576..61660,61705..61835,61882..61971) /gene="Cbr-tag-241" /locus_tag="CBG_15585" /standard_name="CBG15585" /product="Protein CBR-TAG-241" /note="C. briggsae CBR-TAG-241 protein ;" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM34" /protein_id="CAP33709.2" /translation="MQLAMLLKAFLVSTTLIFFRGSKKCVDMGNQITCSPPDDRDAVS ISSYYSVTSNNNNVNLTDRSTRGVENGRKVKIRQLKDDTEALSVSSYLSATSKGMSST KSCESVNDTKSMVTAFSGSICEEERAITPTENETEYIQTLKEEISQLRDINHSLKEEK AQWALRQRLQNAEQSESSLINMLEERLNQAENQIQDYRDENTVLKCELRELQETTFAT SDEKLREKIKTTEGLCDELMEENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRE LELNAKNCRVLQFKLRKTERCREQAEAEKMHSEKKLDEYMNSCPEAVAASIKSDSAKV KDLEYEIRVAKEVSVRLHNELEQTEEKRCKLEDEVFYLKEKVREIQTQNKWREARNKT DIAVVSRTKTKRLSAEIAASVPNIPENEMSKELRDALEREIDLREQMRFSEEDLKRTQ IRLQDIENENEELLKKLSKASKLRPPMIRSARLVTADGNAHLQLELAESQVQHLNTKI ERLEKTNDHLNKKIVELEADCKRGGPTSTHSKNGGFKLTQEMEKDMSKMIGTISELER KNLELTTQVKQLETKSAPKPNFVVPSGTTTTELRKEQEKRKALEAQVNELKTTVFKSD NQKVISLATKIEQLNGQLQMVNERGNTLHKKQIKDGEMSYADELKRRIEDLEKQLSEK LATDSVSELQGKIPTIDEIEQCCEVLAAVETQTGRLCKQFEKIDHAQKDERRRSLSKD SGAAIIVELANVMQEMKNVHQKLDNIKSVTPNTGLSVKRVPSKENILDAKCAKCDQLQ ATIEEQTNEISFYKKKNKDLTNQVLQTEDRWTIEIEKQRQIFEKEIKTLGIRIADAKR QNDELSELLESKSTTLIEKTRSLEEQEERNKKLRAEAELLRKDMQDMETDKKTVKEFE IKYKKLESIFEAEREKMNGERNRSKNELAAMKKMKDDVEEHLSTLHNSELRIKLTEDQ KKSEVSWKNEKSKLEKDIALLKKQLPDEHEMKESCKEKFHLTHNLKGTETMGSLWYKA IQEYKILNSGYKIPISQNSFSGEPSPLRRQDSEKMLVLELKKQISILEKRIADADSSL EDCKIQNAELKDQLSKVQTGWDKDKEAFQHKTRKSEKLRTVEIDAMQQKFSSRMRIME DTNKALHSQVITNILVLARRERDTNKDALANFEKQVADERNSLKVKEKTASESTEKVK ELQNRLATKEEELERLNTDLRLTKEARKADQILWNIDRARNRNEKIDNTDSVETIRKQ YRDCEAFYSKEMDRLNDKITEITAEKNRQKNEAQKTIRVLGEQIRVLEIEQKNLSQNK DSQQVVKEMIESERERLQQIVHLNELQKLTRKYRLSSIIDQLAYVSEATRKTSRENEP DGIRYIINQLTVLRDDEAANNLNPDERAGSVLGEKASNGYAPSISECGEGTYDNISQS SFSIRSVNSAPLRHAYRHANLPIPTTTASVSTTISETEPYYSKPEKLNVISNYTAKRS FSTESSSGFDKYGRPSRRGLYHEPSSSNNLNVPGRKTSNEEYSMGRAASFDNRSQYSE DDTTEDGRGSRPNSTGANILYRVRREELARGGQPSVKLMAKAFEAIDEPRTDKRGFFG IRKSRSVETTQNGKQSKFEEAANSALMHSLGQVEEGVSSNYATLPRGGRNPFKNMGSR LVERVRRSLSRSSRQSRDSDREDEIEVQVYKKPEKPISSPKKTKKKSAESKARKNSSN ILS" CDS complement(join(62294..62374,62425..62490,62557..62655, 62703..62924,63108..63311,63397..63423)) /gene="Cbr-taf-7.1" /locus_tag="CBG_15584" /standard_name="CBG15584" /product="Protein CBR-TAF-7.1" /note="C. briggsae CBR-TAF-7.1 protein; contains similarity to Pfam domain PF04658 TAFII55 protein conserved region contains similarity to Interpro domain IPR006751 (TAFII55 protein, conserved region)" /note="Predicted" /db_xref="GOA:A8XM35" /db_xref="InterPro:IPR006751" /db_xref="InterPro:IPR037817" /db_xref="UniProtKB/TrEMBL:A8XM35" /protein_id="CAP33710.2" /translation="MSKSKKNHKIDDQEKWENHLVLRVPDRFVDRIEKIVNEEPGAEK LAIDVNDDNRAVQLQLGKEILKATIMDLPTITEVHKTIDNKIIHKVTDVSQMVVANEL VPASKSKKNRKKKKEQTKKGEVDNVSPVENEPESSAPVPSAAPKLSAKKMFQFPHGLT PPMRNCRSRRFRKQKAKKTMDTDERLLRADLEADSIRWEIVQDDGEENPNEDDAEASP NKDYKEGDSDQNSD" CDS join(69675..69828,70325..70523,70569..70756,70805..71003, 71052..71292) /gene="CBG15583" /locus_tag="CBG_15583" /standard_name="CBG15583" /product="Protein CBG15583" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM36" /protein_id="CAP33711.1" /translation="MIRLPFLLLASLLLFYGAYVPEPFHTVTVPFKTENGGSTNESVF LEFHCHTVIYDKHMAIKMELESSEEVALAADKCGRRIFQTSRDTKNATIFFDKDWVSA MLTGIAKTCDVASEYKVDLVFNCDGECSGNLSFSLAEIRTPKLDFTKSYSPNGVLEYN TIGGETPSIASAEIGVLVEAAFLNSRTRLNFEVNYTTDYTLAFEKCGLEYLQLEGHKG HKVHELGWEETKLIRLMATTQCEQDSKDMVNYAMRSWQPGNGTLAFHWKRVHEEMKQH PGNDVTEMVLAIGVPKHHKMKKEERPTQLTHLVSCAIIPVIVVIRYRQFL" CDS complement(join(74370..74687,74735..74956,75000..75035)) /gene="CBG27923" /locus_tag="CBG_27923" /standard_name="CBG27923" /product="Protein CBG27923" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJL5" /protein_id="CAS00095.1" /translation="MRIADECLKFIPYPDFMFKQRTNYPRDSRLLISEMEQVQIYQRN VSHSECLKHTACENVVFVKELYEQLEPIIDDLVDIQKNCLYPNSREIERSKFRCPLAS WESATNYLLMCVPKLVRECGCSRQEKELLTELAERSMPIARLFTRNFDSVYQDLVFER GTFDRQYYDPSSGKMNGWNFMWMVAIIIVSF" CDS complement(join(76085..76386,76591..76686,76739..77804)) /gene="CBG15581" /locus_tag="CBG_15581" /standard_name="CBG15581" /product="Protein CBG15581" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM37" /protein_id="CAP33712.2" /translation="MKDSIFFLLLLSSTVLAQTGFPLPGAGVSSSTPTGRIFVRINVL YYFLETSEKSVASSLPHPTVLAQKGSTDQTPGQIMDGSLSISPNIISTASSNGKSSEA PAGTTVSTEPTPENSAVITDSSVEPSHETSTQGLIKITSSPVDVPDSNISTQSPSEST ASSNGAIEETSNTVKSNVAENTTNGTSGTFSDDTKKSSVRTSALPVESSDGTSTPSSV ETDTVNSNIGSDSSDTARSSSVGPSVSADDASSFTNSGSTSSSFNGVSKVVFEGIIGE TPSTSESSTGGSGDSNATTPSSNDSELHHETTAFSFEHWLRQINRSEDSTDHPIADTT NETTSNSVQTEKATTTKCVDGEGDDCFDEEETEEYDDDDDSEYDYEGPSKPREEPTKT PKSEKLESTTRKRRLGNWVYGFEDKNDEDDNNIAKFAHQEEHLYQPKYAAHHGSEDVS VEPYGKHEHKYMDFSNGFANKRFTAISIISAMFVFFL" CDS complement(join(80567..80651,80961..81061,81114..81578)) /gene="CBG15580" /locus_tag="CBG_15580" /standard_name="CBG15580" /product="Protein CBG15580" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM38" /protein_id="CAP33713.1" /translation="MAHNLDVRMLSNGHPIVYVPNVPPFPPPMNQMPPQVPVIAPTPP IQQFPPPAPLSPRSQLAQLQQLQIQQQHMDPLLNPSALRLPPPTIGINPYVDILSGQL PLLPQIMNPFMFPMNLPFVPIPPFPPPLMSLHITKPPTIRAHPYEAGRDRADNAHRRP RNRNNSHNKNDFIRFVPQREPVIQIDNNGVPRDVKQEVHPHQVDRSENEGLARNRN" CDS complement(join(85492..85943,85991..86893,86940..87309)) /gene="CBG15579" /locus_tag="CBG_15579" /standard_name="CBG15579" /product="Protein CBG15579" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM39" /protein_id="CAP33714.2" /translation="MFSFKHFLLLSFIFGTASAGLVFSRNPDGSFGSPSWTKENPSND GVLEGMDNPVNHLAQSENSSGTSRLDNPVNHFYEDEYSNDKLKTFMRAMDNPVNHLVK NENSGIVVEDGRRELVTGNSLNDRNPFNEDGHKHHFNGDGHSHEFNDDGHVLHFNGDG HQHQFNQDVFARHFSGNGYLRKVNKDNHNHHFNKDGHAHKFNDNGHVLHFYGDGHLHS LHDERLINGNQEGNHQRQLSDAFLAPPPKSMDHVVKAPLDDDDLSLVQETFNDQTINK TGQLRYSTLPIVEKALVKDIVRIILKDEEYMILLNNPSFPEVVNMVKTMLREPIQDVL QQQIWSKVLAIEAYYKKFYQPLNNPETKREAMNFLTHLKEASDGHKLTVDDTVKLNEE MQTLAYLVQEKEFNQRISDLEATIKEEGETFKEKHYSRKNAMNNNSSTIASAPVTVNA TTVKVITTTTPSNASTTDTSVRSSYNASLPTTDASLISTTTNSTTTESIYTGTNATVT SNTSFGSTSAVWNVTTTEQTPSTNSSKTDSSSIRRNFAESFNPYVGGPNSVGDSWNPE GTDEDNDY" assembly_gap 88268..88383 /estimated_length=116 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(89568..89817,89884..89946,89992..90092, 90139..90425,90474..90596,90639..90849,90900..91204, 91250..91289,91370..91686,91729..91861,91962..92242, 93163..93292)) /gene="CBG15578" /locus_tag="CBG_15578" /standard_name="CBG15578" /product="Protein CBG15578" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM40" /protein_id="CAP33715.1" /translation="MDEEEQKPPSEVITIDSDSDTGGTITIRSDNKNMIRQRPPSPIP TLEESFQLMARRFEYLQEKIREENCPENTFCITCFAVKRAYNHGCLQTPWKEAFENAF SGVSILNSAFVEHCWNVTAQTAGPEEMHRKEFTKLKRRACREEQAKEARLKNIVFNIA NAQNTDHAFDNIKVPIARKDNEQMIHRYAITLKRLQWLKHSDIPMAMPISSGSKSVCM FCIICYKLHHIDSEECKAKENQREAVEQLHAKSAGYSMLNKKVVETMLKFLDKKHQYH LRLKKKNGPFTDSPQKEVPKTVTDVEMRDVFNKMHKGLFLQTREIEMGKESCCFQCFC PTMLLSSKNCQCPKNENTLALSRAAQKLFDITRDIPTIDGVCKKRCADFAMNEAGIYE KNIEAMELLKKLRGFAKERDSSEYVSSDEERIKEEKKKKKLMTKKKNNGNVVEQRNIV RGPSDDMSSDDNADDCSPSTSSRPSERVWFHPDDVGYATEAEEDSDDEQSDDDEEEEE REVSNVGAESSFRNMMIVLNLIELGAPVISLNRFCKKYRTLYQQLISSEKNEGDSFAK SVFRKFRNRFNGVNNDALKLFRGFVFVNMHKYKNLGELDKLRKGKNRKRKNDRYEDTE EDGDDEEESLTEDSDDSEQFLPGEPTRRKVGRPRGSGKPRAEEPPKKKSKRGRAKKRP IVESDEEEIIEEEEEERFEQEEEVVILDSDEEEIDPPEEEDPEPDEDPESDYDPESDY DSESDD" CDS complement(join(93900..94025,95952..96041)) /gene="CBG27924" /locus_tag="CBG_27924" /standard_name="CBG27924" /product="Protein CBG27924" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJL6" /protein_id="CAS00096.1" /translation="MLWSKHHIATCICAFHIATCICANPLHDEDSLQQETENMVDDEE EDVVVLDCDAEEGDPPEHADDEFIVVD" CDS join(98450..98570,100255..100604) /gene="CBG15576" /locus_tag="CBG_15576" /standard_name="CBG15576" /product="Protein CBG15576" /note="contains similarity to Pfam domain PF03931 Skp1 family, tetramerisation domain contains similarity to Interpro domains IPR001232 (SKP1 component), IPR016073 (SKP1 component, POZ)" /note="Predicted" /db_xref="GOA:A8XM41" /db_xref="InterPro:IPR001232" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR016073" /db_xref="InterPro:IPR039948" /db_xref="UniProtKB/TrEMBL:A8XM41" /protein_id="CAP33716.2" /translation="MENEEIEKLKETSEAPARMDGSEKGDGIEESDSSRVYCDHKPSA PPQTCKKKIFYPGLNGNNSVYVKLVSRENDEFVIRRSRAEKSKTIRDMLQGPNAGTDN TVYLHMVSSKCVKALCCYLNWQYEYLKKKGEYEAFYIAPEDSMDLFFMSAYLEL" CDS join(102439..102513,102567..103109,103153..103394, 103439..103602,103651..103727) /gene="CBG15575" /locus_tag="CBG_15575" /standard_name="CBG15575" /product="Protein CBG15575" /note="contains similarity to Pfam domains PF10327 (Serpentine type 7TM GPCR chemoreceptor Sri) , PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) contains similarity to Interpro domains IPR019429 (7TM GPCR, serpentine chemoreceptor class i (Sri)), IPR019422 (7TM GPCR, serpentine receptor class h (Srh))" /note="Predicted" /db_xref="GOA:A8XM42" /db_xref="InterPro:IPR019422" /db_xref="UniProtKB/TrEMBL:A8XM42" /protein_id="CAP33717.1" /translation="MPSDIEISGFYNSIKEQETYFTWLRRYMEITSVLNIIFVTLTFY LIRTEGKNLKPEYKQVLLCNLFLPAIFSLYMGFVYQPYIVFPYHLLLTVGFFRFGPFV TAHLFNICCTVAILCSMGFIYSFWFNYITICFRISKQSSTKSNLIGLIIGVIFTIVNF VLMTIGVDDHQYEDRDNLFEGDEKLRYFFDEYSIAIVRVRDKWSLKALSVEAFVGITV VVVVIPIITIKSHTTLSRIHNMISKQTLIQLKNALAISLWYLFQFGLLVGIPAATAMA LLLMHYAPSETFPLALVVLAPTQLTCPVICVLYLSVIKPLRYGFLRLVGLQRFAPKSA VKISTQSQLSTFTSHAPPTRKHRNPYGSIRLQ" CDS complement(join(103934..103999,104043..104356, 104819..105149)) /gene="CBG15574" /locus_tag="CBG_15574" /standard_name="CBG15574" /product="Protein CBG15574" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM43" /protein_id="CAP33718.1" /translation="MGLDSLFEGFPPFPIPEAALLPPSFQLCNYHPVDPSFQPEAFFP SSASQNLIQEIKMNKTEEDQEIETEKKNLKWNALIDECKQILKDVPKMDDLLRDGGNQ DDFLMGVKRSAAIFNRRQEIFLLLFAEPASLEKDMVLKLLSKVRNMDEGSFLGKALAV FDSDPNNPKFAALRKIREEKERSMKAREMDAKNLILAFHLSNLEMAQKNWQQKVENTQ RSSDTRTFLINTSGTTFS" CDS complement(join(105990..106272,106819..106873, 106920..107118,107165..107224)) /gene="CBG15573" /locus_tag="CBG_15573" /standard_name="CBG15573" /product="Protein CBG15573" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM44" /protein_id="CAP33719.1" /translation="MNFWILLSVSFAVAHCSSYESLETSDEYDRRDSSSNEYERPDFP YSQQDMYRPRQGYPQILPSPDYPRLPSAPYGGPSGLHYPQYDNSPKLKTLRGDKIVKA KLRYYTSGPNTYVVISCPRNSTPGAYTWILADSKRGRTPSFGHPETVTLAGGIHVEYI AKLVADQKWEGRDFTDDEKHKFRRVGCTHGQTQSFVQN" CDS join(107423..107835,107881..108072,108134..108227) /gene="CBG15572" /locus_tag="CBG_15572" /standard_name="CBG15572" /product="Protein CBG15572" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM45" /protein_id="CAP33720.1" /translation="MFGLVFSAILFIVTASFGQEKSDKQALPHPYNKSDFPPVDDYTL KASSEYGVPSIPGGPLPLPPAIPPIGHYEEVPRPPGISPFDSWQPAPLPQIPPIGHYE EEPRPPGIEPYQNAGKCQKIKQLNVRGHRTARAKFVELERDGKTYIAISCPNTGKPYA LVAEKNGGDTIFHFGSEVIFQDTVLLSSGFNLDFTVRCDERNTVARAYNGRKVSIRRV ACVELPQPNPVTKY" CDS complement(join(110226..110502,110552..110606, 110655..110757,110805..110864)) /gene="CBG15571" /locus_tag="CBG_15571" /standard_name="CBG15571" /product="Protein CBG15571" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM46" /protein_id="CAP33721.2" /translation="MAFLILSAAFVAMVAAGGYAPAADNGASYPSGPAHYPVYRDDSY GSYESREKKDHFRKLKDLDADNVFDADITYYKHRGSHYAKISCKQNTDPKKYTWILAD SKDKIPSFGLDDTVALAGGINVQYVAKLHNKKWRGNNFVNDDKESFKRVGCLHGDFDA FPLI" CDS join(111155..111396,111455..111637,111684..111771) /gene="CBG15570" /locus_tag="CBG_15570" /standard_name="CBG15570" /product="Protein CBG15570" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM47" /protein_id="CAP33722.1" /translation="MFVLLTLGLVCTAAASSGYGANNYDRPSYQGPSYGGNHGYYDYS SSESSSSEEKHRRHCKKPQKLSVPDGIKNLAKSAQFLTLERKGKQYTKISCPNDGNAY LLLGEKEGSDVSNGDHTVNDSILLAEGVNLDLVGKCKGRNVHVKAANGDRIKVKKVVC VKLEGLPDKF" CDS complement(join(113198..113539,113585..113646, 113695..113793,113839..113983)) /gene="CBG27925" /locus_tag="CBG_27925" /standard_name="CBG27925" /product="Protein CBG27925" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJL7" /protein_id="CAS00097.1" /translation="MSDSVSLELEQFSLDQTRVCDCAEIFRQPVNNRYDKSFDVYLGG EPEPGTLGLMLYHNQRFHGTPLTEQISQLVQYFDFWKEMGRNCDISRAITDVMSNVKL LENDKDNKLFPPCQRRVCSDPEMMGELNHLMVMETFLTPFGVTKIVSPDRPGFRPYKW NEDTDAGIVSIYDQSSSANREAERNPRKRCNESAQLMRKFHGNEEGEVNDAERNI" CDS complement(join(114841..114921,114969..115022)) /gene="CBG27926" /locus_tag="CBG_27926" /standard_name="CBG27926" /product="Protein CBG27926" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJL8" /protein_id="CAS00098.1" /translation="MKYEIHTLLVAVRNHLVQIQDNSAPAHVIKQSGIYPAVFTEADI " CDS complement(join(117961..118266,118313..118374, 118436..118532)) /gene="CBG15567" /locus_tag="CBG_15567" /standard_name="CBG15567" /product="Protein CBG15567" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM48" /protein_id="CAP33723.2" /translation="MAIYIIHNNEYHDGYTCEQLGHLIRIMRARTSLLDHKYDSDSII KKTEQIIEKYNYQKRLKNDTLYQYERAALAKPPIGPTKQVEELPKIQNVSDPVAFLGI AEMVGIGSSTPKSDKIKKKVGPKDDSKDAPKILLPEILIEQLSPPTSPQSKT" CDS join(120545..120699,121295..121366,121409..121556) /gene="CBG27927" /locus_tag="CBG_27927" /standard_name="CBG27927" /product="Protein CBG27927" /note="Predicted" /db_xref="InterPro:IPR036085" /db_xref="UniProtKB/TrEMBL:B6IJL9" /protein_id="CAS00099.1" /translation="MSLRDHLRLYHGSWMLKTDELNDLFYSRPPVTFTVYPEEEEVTG RPGILEEYIWNVRTKDPETGEMIRLTEYFRVKFGYKIKHNDEFPIFLDDNTSVLYPPE VLYVHDIGPHEHEFPNPFTVVV" CDS complement(join(122067..122192,122236..122333, 122404..122579,122629..122852,122905..122952)) /gene="CBG27928" /locus_tag="CBG_27928" /standard_name="CBG27928" /product="Protein CBG27928" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJM0" /protein_id="CAS00100.1" /translation="MFGLNTCKIHEKRREQLRWEMEEWWDATYAQNDIESRDIFERKF LIFPVYMKTHAYVTVVVNSNALFQKRSGGTEPCKIFHLGTGPIKRYGLKMTSKFFALL DYHRMKLNKPPFVGKSFHYKKVQGLEPWTMRSRKMQLIWAVNMMLQKELQLSTGRGTG DWRIVTCMFLRSIEQDIVNYSTKDDMFAFYIIMRRTVYLIASVEEYCSCTPKRTIEKI NELLS" assembly_gap 129003..129093 /estimated_length=91 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 131411..132037 /estimated_length=627 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(141313..141374,142275..142299)) /gene="CBG27929" /locus_tag="CBG_27929" /standard_name="CBG27929" /product="Protein CBG27929" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJM1" /protein_id="CAS00101.1" /translation="MTLREIVLGRSRYRIQTLAAMRLFVLKK" CDS complement(join(143637..143816,143858..143970, 144015..144084,144138..144239,144290..144387, 144434..144542,145045..145115,145160..145327, 145374..145458)) /gene="CBG15559" /locus_tag="CBG_15559" /standard_name="CBG15559" /product="Protein CBG15559" /note="contains similarity to Pfam domain PF10320 Serpentine type 7TM GPCR chemoreceptor Srsx contains similarity to Interpro domain IPR019424 (7TM GPCR, serpentine receptor class sx (Srsx))" /note="Predicted" /db_xref="GOA:A8XM49" /db_xref="InterPro:IPR017452" /db_xref="InterPro:IPR019424" /db_xref="UniProtKB/TrEMBL:A8XM49" /protein_id="CAP33724.2" /translation="MSENQKLPPIGYVRNEDLFVITYIYVIFGAITLFLNIPLAIYLL KTTNKNQKELIVIIALALSDTTCAGQFLAMGIYRFLVWFNDVFFITQAACNRNVIVAS YQICIQMDNYFTLAISFDRLFAVLFPVRYNKCGPGYTFFLITSPITASLIGYGAHLLV ISLSDPKFVDEICFNFLVILPGFRDYMAFLRMFCVLIPTLIYFFIYIRMKFKFQRYGN SNAVLSKGMKHLTKTVAYITLASVFLVLIPEIWWYFRLFGGMDASFYFMFILLKKIVT FFIHTIRHRELMKHVEKILPKKFSKMIHLDTQSQSVVSKVKVLREVSHPMTTSMR" CDS join(149202..149243,149310..149411) /gene="CBG15558" /locus_tag="CBG_15558" /standard_name="CBG15558" /product="Protein CBG15558" /note="Predicted" /db_xref="GOA:A8XM50" /db_xref="InterPro:IPR028513" /db_xref="UniProtKB/TrEMBL:A8XM50" /protein_id="CAP33725.2" /translation="MAAEAETSRDAGAKIIAAEEEPRASAALEEAATVISRVPCSFFT FIL" CDS join(154800..154963,155010..155180,155228..155329, 155377..155940,155989..156405,156477..156605, 156960..157665,158379..158562,158761..158847, 158898..159100) /gene="CBG27930" /locus_tag="CBG_27930" /standard_name="CBG27930" /product="Protein CBG27930" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJM2" /protein_id="CAS00102.1" /translation="MMGSRIELYTQFLDGWKTMRSGLSEENATWIFSEMISGMVSLKK FEIENFSKKNKWATPNKREAFPLYLSDRPVKDGSLTVEAKPMFELDKQIEMICGPSFP KALVSELKLKMNIADIARTSQKRRFGQEVNGSGNEPSTSNSVEKNQESSRNQNRSKSQ QPTTSSNRMVTIREMDVALQETPVLKRTEVQSNQGLTTSNSAPAESRPRSRKMCSGFG LMFDGNGQTRITVSRTSSFDGGRLRMIPNRAEVPQQPSEFFPALKNVVQNESTNDQPK LMGILVTRNEKGEYIPIGLTPLTVSQLTSGNRQILQNVVLEEPVTELELVTDSRSLEP ASPSRVDPRRPEDDRLSTNAVCSGSTTSDSGLSSTSEQGHASTRSSSPGSKVSQRPSE KAKKGKQDVQNSGLSSPSEQSNVSTRSSSRGNKNCSSGNEKTEGKYDHSTELNTLSEY HQKARPQSYASVVSSHATRDYDRTNTPALAVASSSSTSVAIAANLLGDEKEEETLVMS LRQGNIGRKPSDDSWIVVKPKNPLETNESLFPTSSLNSRLCEPSTSYAVSKNSRIEKP NALNEYVSNSQTQTTPILNSSVAENWDNVVVDEQAEKEHELKRLKRQSHRAAKFKKEK EEKRASRSEQSRHVEQKNLMAAHEEPIIEEQTSENTVRTVALYAPLTSNLNLMSLINA HNALKEEYQGTYDPVTQQYSDGHIFHEYADEIETGKNRQPKDLIFETSELHAKLVFRL LWFENKKKLDKCIVDDATRIRLQDALSMVRTMKDRIDMAGQMLVWRITHINLSSMKEF NIVSIVRNLIDVQRQHFENDLMMARTMGDLVDEGKLVKNFVYEKHVFTILKLPELLVP KLKEGNANSRTYQDITTLVLLFTKRVEKLYEEFGKLYEFKVVKDRQRGRRGY" CDS complement(join(160590..160594,160744..161077)) /gene="CBG27931" /locus_tag="CBG_27931" /standard_name="CBG27931" /product="Protein CBG27931" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJM3" /protein_id="CAS00103.1" /translation="MSSDDEAFLMTSEIEDDLVVGEDLEVEEQHPADPSPYVNNPVAQ HDIHNEMNQILNTPWNELSRDQAEIIHRLVAIAADQQLNQVELRNSIENSLMELATIR GRNQQVPQQQ" CDS join(167712..168076,168397..168659,168707..168993) /gene="CBG27932" /locus_tag="CBG_27932" /standard_name="CBG27932" /product="Protein CBG27932" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJM4" /protein_id="CAS00104.1" /translation="MAPIKSGRHVTFRPFAEVRVIRDNDSESNVSGSESAGSTGSCVS YNVDDYYSKPVKLNQVLLKKPGLVKKKKVPEFDLNESTVAHVGQCEPWKETEEPVDKV DEGNLKNYIESMWKKPISLNSFLNEAHLSDELELDRIDSSDPEMIAIPPAKKKKLLTK KARFFHKLLMKRKEKKSRDDEFCFKYAEKLYMFISRAKKGKTTKSILSEDNEKPDDNK TSASFLEERLQLTNIRFDTCKLDFQLKAAIRHRIQTGKLDHKVKMAYEVIIDNYNSAL GPHFFGLFHHVHDRNFKDLEASFLLNQW" CDS complement(join(170094..170331,171169..171284)) /gene="CBG27933" /locus_tag="CBG_27933" /standard_name="CBG27933" /product="Protein CBG27933" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJM5" /protein_id="CAS00105.1" /translation="MNEISLTSKPVVVTGPIDFSDFHREETARRLKEEQENNGMRLEF TKEYEWDASELDPIVRDFIEKQIEDCPFEETVVGYQTLLEMYNSYLGPEFYFLMMLKK AYNFREYESWLLFGY" CDS join(178087..178246,178897..179098,179145..179225, 179276..179462) /gene="CBG15553" /locus_tag="CBG_15553" /standard_name="CBG15553" /product="Protein CBG15553" /note="Predicted" /db_xref="GOA:A8XM51" /db_xref="UniProtKB/TrEMBL:A8XM51" /protein_id="CAP33726.1" /translation="MKIIAIVILGMLAGEHHVAARPPSAPYIGEVSFEFYQNQTFGFR GPLKEVLGNAKYYDAQVTISYVCSAPIAWSFGKCDRNYYRQDRESSKARIVFDTAGVD TLLKLIEMECYEPGKDQEYIQFYMFPTEDSFTNCRFAVAIAAEPIDMENFTLFHLPGS ALHLYEEKPPKIAETAETSEVSDRHLLLRGLIAISFFIVGMSILLTQSC" CDS join(180176..180314,180388..180583,180630..180707, 180758..180986) /gene="CBG27934" /locus_tag="CBG_27934" /standard_name="CBG27934" /product="Protein CBG27934" /note="Predicted" /db_xref="GOA:B6IJM6" /db_xref="UniProtKB/TrEMBL:B6IJM6" /protein_id="CAS00106.1" /translation="MGVFLKVFFILAITFSITFSNAAQSHYFSFHNSYDLRLSIKNMI SYVKGDYKWVSVSTKCSSPVRIYVETFSNVIFSQKGPQKQTTVTFDLKAIESLLTFTG KKDAKKNADIILLRFFSTKSTLTKCQLTFNLHTKLNSENFQFIVSDSYERLEQPSDLS HQRIRFYMILLAGLLILIFSSSVIVGCLTSEGLSEDDNVVEMGEMTEVGNQLI" CDS complement(join(182477..182501,183117..183205)) /gene="CBG27935" /locus_tag="CBG_27935" /standard_name="CBG27935" /product="Protein CBG27935" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJM7" /protein_id="CAS00107.1" /translation="MVIADISAMVSLLSGNDTDKKDYVANVTYIAPTTTSL" CDS join(187702..187792,188213..188281,188326..188391, 188441..188626,188797..188945) /gene="CBG27936" /locus_tag="CBG_27936" /standard_name="CBG27936" /product="Protein CBG27936" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJM8" /protein_id="CAS00108.1" /translation="MCKTINKKYNLHKCVRIIWQRNLNCLPPKRKFTETSMNNYVCCS RNSSAVQSTDTSGNQEKATASNKEDLALAEQEASPSNDSPRMMTRYRKRLSDTATLAI DIKHNRRSMSSNSQPEAVSRQQLVTSLGTPDFFTNETTLLFLNAPEHNASVYDWVEEN KEFIEERAKKLKESGLYPLMNKESSL" CDS join(192762..193372,193420..193522,193681..193737) /gene="CBG27937" /locus_tag="CBG_27937" /standard_name="CBG27937" /product="Protein CBG27937" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJM9" /protein_id="CAS00109.1" /translation="MLRILPTDWDHMVEYPLPGCEQFGFKELVPTYYKMFELMVSEEL PGAPSPGFPRRSINYPSSKDMCSPVFDHCQVDPEMFRPLMNYPVKKQEYVPMEQDVAH QMKYLELEKKTTPGPGPNIYFGQHAKTFVPATKNFNPAQGNSKTPINGYKPKNLDAEF PNLNAPVKNEHEKMKATVEKKPHYLKKYDQNNIDYRKPRHYGRRDDLINQEYINNQIN KLVQEKRKTGGAIVEEEKNDSFDHDPCSCTTTTSSSPT" CDS join(195791..195926,196095..196172,196763..196882, 196940..197353,197415..197523,197569..197690, 197768..198138,200654..200799,200902..200965) /gene="CBG15547" /locus_tag="CBG_15547" /standard_name="CBG15547" /product="Protein CBG15547" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM52" /protein_id="CAP33727.1" /translation="MTLVLSFCQRNQVVSIDKIMPLENRIDDLERITVVATSFLLQKA HNQFRIFREFCKYQRTHGFPAPVFDRNGSIVNQPPPLGSSPKSPQFHSRPGYDYQRPI NGMHFQQAWDNNSFALSFTLPCDQFSPAHQAFDQFRNHPCLPNHLIPRKVIFMYDRPT NQMPPKTVQLVRNPYYQPPAVQLREMMKGNFNVVRYNAKAQTEWREHSADNSHRLHKA VLLSGEKAPTPTPNCKLDRKEWSTKSKMISELIQPEMAAHQRSIAKVAKWLEEMDELT QKPYEAIETTHPTVGEFLEANPSASIYIEVHGSQSPRRNLKNLAVPLSPNVKHISLVL GTKVERARSGGVDVDGDHHDSSNSKKKIEEKMETKTEERKENETGLKGDSENNACLVG QESSGAERCSESNGSQTSGFNDAQFSHDDVESQAGMLHFWESGVLGSQPENLAIGKEE VFSRFLIVNLIAFTCAPKFEDPLLRVSVSLLASSRVKIPCQFHIYVKKTNDRGIDVLQ KNKNNNTPYVH" CDS complement(join(202336..202523,202571..202706, 202752..202985,203034..203134,203242..203401, 203446..203451)) /gene="CBG27938" /locus_tag="CBG_27938" /standard_name="CBG27938" /product="Protein CBG27938" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJN0" /protein_id="CAS00110.1" /translation="MMFCDNSTPPLSSSVSSCHQPDQMVQKKEKPKFRNFSGVEVQSD KDIKELIERFEEDQNGNPKQAHCVLMESIFGQQEETVLKIVALKNEILFKAMPNGKRY KCREKDTEKFFTTDLRCQHCFLGRGLRYLNENPIVCHQWETQLHILIEKLKEKSGRRP STNSPPITMITCPSFPQKNNENTAKKRVGSPSQNHESLRCSPPKQERIPGQENSVLSA PPQTKKEKLRAMEQELARKRKAMTNALGGLRENLKTQKSLLQKIVKKESNYRRQSC" CDS complement(join(210985..211229,211281..211401, 211748..211848,211897..211984)) /gene="CBG27939" /locus_tag="CBG_27939" /standard_name="CBG27939" /product="Protein CBG27939" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJN1" /protein_id="CAS00111.1" /translation="MKPVEEEVFIPRKGEAQDVDVSKWMEIIKNPSLLKSTLNKVYKR IFNGESELAETLKIFVLEERNISMSDEIEIERDRPGQFAFKLKCAILNGVRVDRELLA RGEAIASLQDKWTATDEEGVDWVWGRLRTERTKFKRSNPKKSKNSLMKKIRKDAKKDV TVWAQKAISKSFQNRSNPTNNLLI" CDS complement(join(215454..215594,215648..215995)) /gene="CBG15544" /locus_tag="CBG_15544" /standard_name="CBG15544" /product="Protein CBG15544" /note="Predicted" /db_xref="InterPro:IPR035291" /db_xref="UniProtKB/TrEMBL:A8XM53" /protein_id="CAP33728.1" /translation="MFSRTALLLSCMAIAASGFSVRPSSKNTVQDAHEQLTKKIRCWE PIEENIAGNHFSGEHTLSEPIYELCSYMPDPKDFNKGYVNGVDMESDDYTNVLNFFQI THPRLATLNVCLQEAFQFRAAGRPSQTSIRCLCKRDGCNLPKGFTTFLDFNKLPMPET SF" CDS complement(join(222343..222489,222534..222602, 222721..222791,222927..223041,223091..223329, 223401..223551)) /gene="CBG15541" /locus_tag="CBG_15541" /standard_name="CBG15541" /product="Protein CBG15541" /note="contains similarity to Pfam domains PF00089 (Trypsin) , PF03761 (Domain of unknown function (DUF316)) contains similarity to Interpro domains IPR001254 (Peptidase S1/S6, chymotrypsin/Hap), IPR005514 (Protein of unknown function DUF316)" /note="Predicted" /db_xref="GOA:A8XM54" /db_xref="InterPro:IPR001254" /db_xref="InterPro:IPR005514" /db_xref="InterPro:IPR009003" /db_xref="UniProtKB/TrEMBL:A8XM54" /protein_id="CAP33729.1" /translation="MRLNPISSSTIVIVFFVLSIGYIGAKRLTDEENKILQAECGKTA KSSNAEGITAERRKAPWLINYRNGNLSCSGVLISRKRFLTARHCLTKNITDSPSFSDK ACTPLKDYIIQLDQLELDIGSSMITKGEACLFEYCKLKNPHYVDLSIITLPTDLDLSD TLKPICISKSDSKSGNEASSRPSRVFSTEKLQIASSTAEHNAHEATGWHTAGTRAGDS GSSAIVQKDGRSFLIGIVSRKVGGSLLMDIPSQAKKLCKLYNICP" CDS join(227141..227243,227291..227883) /gene="CBG27940" /locus_tag="CBG_27940" /standard_name="CBG27940" /product="Protein CBG27940" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJN2" /protein_id="CAS00112.1" /translation="MIAEQNPTTVVQQPKNQPQNCFYVYSTALKALVGEIRKVHNWLS DHTQKEQSMQGRLIYSLIVMDLSRELTDFEKRADAYEEAGNKNKIADQETIEFINRTS NGIHAALREWKSEHQPDDDFDVVIDQHSMGSFLKVLKRLNEMNDVEETNKLRKVLVNG VAGGNVEEKTVQLEPQSAQKQPPKNGKRKQNGKRKRNDKQKPQAQQEPLQAPPGEPKS DQQCQQEDQPEPQ" assembly_gap 227912..228282 /estimated_length=371 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(230253..230499,230576..230745)) /gene="CBG27941" /locus_tag="CBG_27941" /standard_name="CBG27941" /product="Protein CBG27941" /note="Predicted" /db_xref="GOA:B6IJN3" /db_xref="UniProtKB/TrEMBL:B6IJN3" /protein_id="CAS00113.1" /translation="MRILHLLTLVGAVILMIQGVSVGADTLENVLKNADYVKIVISVE NQEKASGIDTTADKTCQTSRIFKIAVGAISTFLFSPFSFWILNWKNEKKITESIDNVD YEVLEIDGTKYVVVKTADDDDEFPHGNHQELGESFL" CDS complement(join(231074..231269,231645..231823)) /gene="CBG27942" /locus_tag="CBG_27942" /standard_name="CBG27942" /product="Protein CBG27942" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJN4" /protein_id="CAS00114.1" /translation="MRILLVFSVVFVALVAILATNIFGKRDYLQEGSMDSETSKEMTF KLVKSKESAQETKRTPILVPLALRRYVKKNKNEKFIADGCCVLKTSTGTYVLLDFTGE DHNNYTSEELQEIAHEIRQTLD" CDS complement(join(232453..232604,232627..232821, 232868..233017,233065..233247,233574..233618, 233664..233820)) /gene="CBG27943" /locus_tag="CBG_27943" /standard_name="CBG27943" /product="Protein CBG27943" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJN5" /protein_id="CAS00115.1" /translation="MKVEDGNFYFDVLWETGETTVEPMSSLRKLSHVKLQEFYQTNES IAKECFFEKYCWRKGHHEGKAENENASNREEELGNLRGQEQSDGDDEHQVMVEQPIVE ENLLTKEIKVELDPNDIHMNEPTENRDNENAAVPLQTAHSVTAAGTYKVRPASAPPSF RGESKASGLQEFQVKKKYTHRIEEILRYEKKPAPKVEITMDVWNAILNDARFEVPFEI EPDSDSEDEIESDEEDDVDSDSDYDESSVSSISEDAFVDIMTLDGVPTVADLSGQLPS NDQVLRAFSKILNITAQ" CDS complement(join(239122..239476,240151..240292, 241512..241802,241850..241946,241994..242080, 242288..242349,242404..242490,242541..242919, 243176..243370)) /gene="Cbr-nfya-1" /locus_tag="CBG_15536" /standard_name="CBG15536" /product="Protein CBR-NFYA-1" /note="C. briggsae CBR-NFYA-1 protein; contains similarity to Pfam domain PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B contains similarity to Interpro domain IPR001289 (CCAAT-binding transcription factor, subunit B)" /note="Predicted" /db_xref="GOA:A8XM55" /db_xref="InterPro:IPR001289" /db_xref="UniProtKB/TrEMBL:A8XM55" /protein_id="CAP33730.2" /translation="MNGSLSRGPAPRTATITNHDRKPIPPSMFTFRKTTPAEMKQAST PKSLSLVNRGVFTNPEYLKHTVRPPIRQQAPPPVTVPPIRKEPIRQQYQLPRPILYAP ATVYQEEDEDDDDGPQYALPAEHLFPHPPPEEPFQAEPTSTQYDDQFSSTSSPVSTSV STAYTTPISTPTVNPQFSQVDTSTPSSYSNTSFTNEPVFKKAYTVSDNVPSSSTDVAH NSASGNSQEADNSNTIELPTNCKLFQYQWVVDGIPRTLLVPMPINATEQDVREMLPTT LNVDPEELARTFRADTSKAEITTLSLPGGGMPTIETADDDEQQEEYVSEFDESVDYDD EADEYSPILVNPKQYHRIVRRREMRQRLEASGRLPLSRQKYLHESRHRHALNRKRGID GRFDNALMAGRGGEDDDDDEDDDEVSTTSHIRPIDRRLLPKLAPIAAGPGGMAPVYKC NDYTIRSVPTTSANMQNTVQMIHNGGQTTTTHQIIHHDSHNQTMMMDPNIPSTSTGIY ETQMIDHQQNYMNAPMNSYDDYTHHEQYEADTLHYQDNTEVGVDLTGADGQSFTNL" CDS complement(join(246667..246740,247766..247940)) /gene="CBG27944" /locus_tag="CBG_27944" /standard_name="CBG27944" /product="Protein CBG27944" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJN6" /protein_id="CAS00116.1" /translation="MYEKTYYDAAHLQYPHRIYEKRDDEKWTEFFKRVQAERINAEKA KEKKEAKHKAMYDDDVICVAGPFPSTSGTGNAPNSIDL" CDS join(251935..252021,252118..252198) /gene="CBG27945" /locus_tag="CBG_27945" /standard_name="CBG27945" /product="Protein CBG27945" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJN7" /protein_id="CAS00117.1" /translation="MMLAQPKSAGDFNERRFILLLNDLTEGRNTLNNWPDAIVSLRRS LLVDAMLTSNK" CDS join(252565..252572,252626..252674) /gene="CBG27946" /locus_tag="CBG_27946" /standard_name="CBG27946" /product="Protein CBG27946" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJN8" /protein_id="CAS00118.1" /translation="MLRSRKLIIQPWTKFWMR" assembly_gap 253370..253860 /estimated_length=491 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(254073..254485,255215..255353)) /gene="CBG27947" /locus_tag="CBG_27947" /standard_name="CBG27947" /product="Protein CBG27947" /note="Predicted" /db_xref="GOA:B6IJN9" /db_xref="UniProtKB/TrEMBL:B6IJN9" /protein_id="CAS00119.1" /translation="MKVLLLLLLLALVVKLVVLLPTSSSQGFRLRPNDWNTRPIAGLK LKELATGKPGKTEFSITTESVAFFVFNATLTASASVELTLETSSDVQLRVHRCNWNTS LGFQSSGTVTLPPHVKRSMLELDCYRDKTRIIFSLESTAQATGTVELEITADESFFML AAIVVLFSIFVGIAAVIEYKHSE" CDS complement(join(257206..257303,257353..257469, 257518..257665)) /gene="CBG27948" /locus_tag="CBG_27948" /standard_name="CBG27948" /product="Protein CBG27948" /note="Predicted" /db_xref="GOA:B6IJP0" /db_xref="UniProtKB/TrEMBL:B6IJP0" /protein_id="CAS00120.1" /translation="MKVLLFFALVIVSLSSSSQESPRRPKTSSSQAHPVVPRNTTQAE AEELNATGTHNMEKKEIETYCMITLVVLLFFFFAAIAAVQEYKQSPKKVRLVENQNRE EVELVTMRATNGIEETGV" CDS complement(258665..260053) /gene="CBG27949" /locus_tag="CBG_27949" /standard_name="CBG27949" /product="Protein CBG27949" /note="contains similarity to Pfam domain PF00665 Integrase core domain contains similarity to Interpro domain IPR001584 (Integrase, catalytic core)" /note="Predicted" /db_xref="GOA:B6IJP1" /db_xref="InterPro:IPR001584" /db_xref="InterPro:IPR012337" /db_xref="InterPro:IPR036397" /db_xref="InterPro:IPR041588" /db_xref="UniProtKB/TrEMBL:B6IJP1" /protein_id="CAS00121.1" /translation="MDVITNLVNTCEQLPVTAEMVKDYSKKDTLLAEVYEYTTSGSWP NNIDKSSQIVFFHNRRDQLSIVSDCLMFNDRIVIPVSLRARVLKMLHRAHTGMVRMKQ LARTLVYWPSIDKDIENIVRSCDQCAAVSKNPIKNTLCSWPISTKPWQRVHVDYAGPV EGTYYLVVVDSFSKWPEIVPTTSITSAATINILRKMFAQFGDPETLVTDNGTQFTSAQ FHDFCKDRGIQHTRSPPFHPQSNGQAERFVDTLKRALGKLKGEGNTDASSYLFLQSYR SSPCTASPNGSSPAENFIGRKIRTFLDQLLPTDQLPNSHDTEMEKQFNNQHGARCRNF NVGDKVYVKDYRSINTTTWIPGTIQRRIGRTMYRVTVENNNFWIRHTNQLRRRDTPTS FDVPLDTMDTMDAIDWTPLSTTWPDRSPPTPAPILPGSPTAPSPKPIRKSTRTVKPPP KFVMKPNKKSYH" CDS complement(260179..262299) /gene="CBG27950" /locus_tag="CBG_27950" /standard_name="CBG27950" /product="Protein CBG27950" /note="contains similarity to Pfam domains PF00078 (Reverse transcriptase (RNA-dependent DNA polymerase)) , PF00077 (Retroviral aspartyl protease) contains similarity to Interpro domains IPR000477 (Reverse transcriptase), IPR018061 (Peptidase A2A, retrovirus RVP subgroup), IPR001878 (Zinc finger, CCHC-type)" /note="Predicted" /db_xref="GOA:B6IJP2" /db_xref="InterPro:IPR000477" /db_xref="InterPro:IPR001878" /db_xref="InterPro:IPR001995" /db_xref="InterPro:IPR021109" /db_xref="InterPro:IPR036875" /db_xref="InterPro:IPR041577" /db_xref="UniProtKB/TrEMBL:B6IJP2" /protein_id="CAS00122.1" /translation="MTDDQVCCMVWINGLRDNTYSDIRTKALQVMEAKPECTLLELEQ NIKRLLDVRADSKSVCKLEPKSSEINAISTKETKRDKPQKAPPSPCYKCGGNHWAKEC QKQVTCHLCKKDGHIAKFCRTKKRETDQKGKNNRIKSVMVRSASTFEPSRIYRIVTIN GTKIQMQMDTGADVTLISTKDWNRLGRPQLQAPTIQVKSANHQPIKVRGSFQCNFVIN GNVASGQAHVAETGTLLGTDWISKDPTLWKTLNQQICAVSSDVGSACDYLDNTREQLK SNLEKEFNNVFQPGLGKCTKTKASILLKPGAQPVFRKARPVPFAALTTVSEELERLQQ SGVISPVDHSEWAAPIVLVKKKNGSIRMCSDFSTGLNDSIQQHQHPLPTADDIFATLN GGKYFSQIDLAEAYLQIEIDDQAKQMLCINTHRGLFSYNRLPFGVKSAPGCFQQVMDA MITGLDGAAVYLDDIIITGSTIEEHNSRLKSVFKRIDDYGFRVRLEKCTFLMPRITFL GFCIDKDGRRPDPEKVTAIQQMPEPKNDSQVRSFLGLIQFYGTFIKELFKFRPPLDAL TKKDAEFKWTSECQSSFDNIKQMLQSDLLLTHYDPKLPIIVAADACQYGIGAVISHRF PDGSEKAIYHISKALTAPQRNYSQIEKEVFGLITAVTKFHKFIHGRHFTLKTDHKPLL SIFGEKKGIPIYSANRLQRWATIL" CDS complement(262710..262835) /gene="CBG27951" /locus_tag="CBG_27951" /standard_name="CBG27951" /product="Protein CBG27951" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJP3" /protein_id="CAS00123.1" /translation="MPLPGDTTTGDQATELADLTKQIGLLVNTFAKLAQASATLR" assembly_gap 265677..266057 /estimated_length=381 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(269237..269777,272163..272263) /gene="CBG15531" /locus_tag="CBG_15531" /standard_name="CBG15531" /product="Protein CBG15531" /note="Predicted" /db_xref="GOA:A8XM56" /db_xref="UniProtKB/TrEMBL:A8XM56" /protein_id="CAP33731.2" /translation="MRFHAVLLLFIGVTSINGRKLEKEVSSDEILSAFNMMNEAKLGI HYEDQVKPLPMHFNENGTIFFEFGNETGIVYRGSPLDILSTLKWSPEEAVHLFVDISY PGASILLSRCNGRPINLKASVVHHEIKLSCKLMENVDCMDLHLIRTEGPAHGQITVVN KPRTWFHVHIIAMVLISICIVILLVRRLVYIILRVVFPYHLMDEGQRPDQEYY" CDS join(274177..274418,274470..274586,275452..275563) /gene="CBG15530" /locus_tag="CBG_15530" /standard_name="CBG15530" /product="Protein CBG15530" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM57" /protein_id="CAP33732.2" /translation="MSVMSNAYQMDSPKRYCSPGPSSSASSWNSVPSPIDYTAYEFMS MMESILKQPIESIDSNESAEEDDSIKKSEKSKKFYESDGKIIQLKDKVIAIVDPQPRI IHKYALAALKKKGVYFVQSETELFGPFFVTPTPNDLPKGELVMIYEVIRNNRGV" CDS complement(join(277317..277566,278448..278543, 278652..278854)) /gene="CBG27952" /locus_tag="CBG_27952" /standard_name="CBG27952" /product="Protein CBG27952" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJP4" /protein_id="CAS00124.1" /translation="MGSNTPIEDKIIVRRASTASLLSEDKHRKILGTDSSGVGAVGVS EPSGIVKNVNHEKSATPLQSDKVKLICAINANSTNAASGGAPMTGEQKSGGSKSKETN WQAWTCQSGLVPVSDDGAGHSFGANAGPSSSGTVFDDHGNACEVNNKCNVMDEDETMK ADEKDKRIESVNEPAVKKSKMK" CDS complement(join(279405..279828,279971..280039, 280150..280245,280688..280782,282508..282751, 283027..283214)) /gene="CBG27953" /locus_tag="CBG_27953" /standard_name="CBG27953" /product="Protein CBG27953" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJP5" /protein_id="CAS00125.1" /translation="MAGLHGQNAEKAGIENNYILMGVPAIAVVKQSSEFSRFHFDSRA PGNTAIAHTTTTNSQLVPWCNCKNLPRTDPKIAQLSLKVSELEAKIMELTGIVEGKDA QLLQNERMFTNMTQTIPTHVLENELASRNRAVMNQIAGIQEEIMYAPAIAGVDLEVAD GKKTADGNTSNSGPDQIVAEALNKPVAVIALNDESEKKPLPKFNRQSEADRMTPIAMA VMRATNAVLSRIKARSTVDDRIALNEMRRGFLENDVERINNRLNDIEKNNQEMKQKID FLVHQLFGGNAGVLNEVILNSAAFVVQNCQAPFSGLEQIQPTDASFARTSGGTSERTQ KNDEKEESDSEEEAESNDDEGESSDKEKPAAKKAKTK" CDS complement(join(286870..287461,287877..288553)) /gene="CBG27954" /locus_tag="CBG_27954" /standard_name="CBG27954" /product="Protein CBG27954" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJP6" /protein_id="CAS00126.1" /translation="MSSIEEEMELLKESNDEGQQEPIVDMEAVAAELLDGELLEGVLP GDNEVDSNALNEVPNGEENAVAEALGGVSEGDGDPIPVVAKPAEVVETVAVDSGAEGD TDPVAAVTKVAEDGVDVGDVARADKAEAVQAGAAGAEAAIDGAKGDAKPVAAVTGVAE DGAAVGDVVQDDGAEAVQAGAAGAESAIDGDKGDAKPVPAVARGAAAEAVEARRQGRQ RRRARQASVQADDEEIEVIRDDFEDQGVVPELTLQASIEKAVRKATREMRSEIRALRN EVSHLKMRNYVADEFARPGSGKITSAELNIELYRKCLQDHLMRNPALLLAGMNQGVGM PLAPGVSLPLAQGVGLPLVQGVGISNGAAVPPAQDASTNGIEGAEEDVEDEEDINDEE DDELMDEEEPKEVIDVDDEEPAPKKAKTDE" CDS join(296386..296454,296504..297480,297532..297700) /gene="Cbr-sams-1" /locus_tag="CBG_15526" /standard_name="CBG15526" /product="Protein CBR-SAMS-1" /note="C. briggsae CBR-SAMS-1 protein; contains similarity to Pfam domains PF02772 (S-adenosylmethionine synthetase, central domain) , PF02773 (S-adenosylmethionine synthetase, C-terminal domain) , PF00438 (S-adenosylmethionine synthetase, N-terminal domain) contains similarity to Interpro domains IPR022628 (S-adenosylmethionine synthetase, N-terminal), IPR022631 (S-adenosylmethionine synthetase, conserved site), IPR022630 (S-adenosylmethionine synthetase, C-terminal), IPR002133 (S-adenosylmethionine synthetase), IPR022629 (S-adenosylmethionine synthetase, central domain)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XM58" /db_xref="InterPro:IPR002133" /db_xref="InterPro:IPR022628" /db_xref="InterPro:IPR022629" /db_xref="InterPro:IPR022630" /db_xref="InterPro:IPR022631" /db_xref="InterPro:IPR022636" /db_xref="UniProtKB/TrEMBL:A8XM58" /protein_id="CAP33733.1" /translation="MPATFLFTSESVSTGHPDKMCDQISDAVLDAHLAQDPNAKVACE TTTKTGMVLLCGEITSKAVVDYQKVVRDCVKKIGFTSSDLGFDSATCNVVVALESQSP EIAAGVHQDKGDDEVGAGDQGIMFGYATDETKETMPLTLLLSHKINAELHRQRRSKEL PWVRPDSKSQVTIEYESRNGATIPLRVHTVVVSTQHDPNITLETLRQEIKEKVIKAVI PANLLDENTVYHINPCGTFVMGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTK VDRSAAYAARWVATSLVNAGLAKRVLVQLSYAIGIAKPISVLVYAFGTSPLTDEELHE IVEDSFDLTPGAIIRELDLKRPIYEKTAENGHFGHAEFPWEQPKALKISPALIEKVKG GSVIPATSAIAH" CDS complement(join(300358..300707,300757..300900, 300947..301326,302273..302398,302783..302910, 302952..303074,303145..303228)) /gene="CBG27955" /locus_tag="CBG_27955" /standard_name="CBG27955" /product="Protein CBG27955" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJP7" /protein_id="CAS00127.1" /translation="MPKLPFLNTEEGKAAWKIRENQKEILTQKLRGWDALDITDPITS RSVVEASNSIDDFEKRSFLDKNVQLKFLKPPYPTNTDSPDSFELSVKNLAEKFLLKNA GSLTEQSKTRNIVRKIIGNKVMDKRASSLSSITEEDHEEFLEEGQPNGQELEQVPPPG ESSVCVINGKIWYLVSQNKGPSVGSKSKKKNFKKREKNNKKKVTIEETEDELMDRLIQ ENREAAGLDQEPVPYKLVPMTPERKKAIMDFISIVPENPEEKERRLKLKELAGPDFQR VLAERITKLEAVPIFEIISKLSFGEFVLQTVEKSVAFFIKDIESVMKHGMHPENIENL FFDKFKEHVVIPDPSESPKTIRKRCKFVRNFLFKYKKRYVMEEDKYMKLRSFVYLNLL AQLLDGVKVHIPTLEVLVKSDGTPEFEKKEAAVLKTVLAQYFYQLDGITMKI" CDS complement(join(304300..304616,304666..304770, 304881..305347,305401..305484,307124..307309, 307353..307505,307553..307702,307751..307924, 307972..308353,308399..308571,309268..309476, 310089..310205,310250..310336)) /gene="CBG15523" /locus_tag="CBG_15523" /standard_name="CBG15523" /product="Protein CBG15523" /note="Partially confirmed by transcript evidence" /db_xref="UniProtKB/TrEMBL:A8XM59" /protein_id="CAP33734.1" /translation="MTNSLSSTNGTVPEKWLQMREQRIRNHTDRLNGWLHLDFSNPEV IGDLQMIKDENSLVEFEKKLANWAALQNANFPASEVRFPLNKRGTVFNINAVPFQPRI MAPRFVLPIVPKSYKVGTPEAAPIFSRIHEKKKESIIRIEVTLADDECSSTLDEVTEE PSTTETRNAGHKDIDADSSSSCGRNRGDLTSQTSPDMAPLQLKTSNFPPCKRREYSSE KQSVDRPTEIDEVGFVPHVAKNNNKKSKTGKKKNKSGKKPKNDVVWPTSETIEQPNID VDEVTEEPATTDTKKAGRENTDLDEKEQTGFDEVKSLSHEKAPNPEAIFKKITISVLS SGQASKKKTTKPPLTHVLPPDSAKLEKGTSSTLSSKLCEVLILKDNKVLVMPGSNGNN LIDATTTRLMQQKDVVGLAKTGFDEVESLPDEKTKNPKAIFEEDEFPVLSSVPAYEKK TIKSSTTHVLSLGSGKPESSKLCGHPLLNENKVPSVKEQNGNNTKTKTWASVVKSKSP IQPFSAKESQSGNRIKTQGSSVSSKPHPPSSSWKKTRAFPDTSTVHNPPKPKQFDNDG FEIVINGASTSEIASKMKRKIVIKKESPSSSTSSPSIPSSTEPSSATPSLSSSSSPQK KKKPSNQKKLKNVLKVTEDDRLAMELGIEENKKWQEKMKAEEEEKKTMENEEAEAQEG LLKKLKEDEEEKTPLKEENQETIPEEDKKEVTAEEMKEYREELSMRAAVQAFEEQCIG HKEHQMIIKKVKAFCASIKKLKGKKYSNPLVVPFDHREPKDVTNQRDIDNGHLLNIRI SGAKKAGGTCNMFLAAVFGAFQEFYSTEVGPTLIKLFGRTDRETYMAREEHFIKTLFK DQAKILKFVGY" CDS complement(join(313430..313600,313672..313791, 313839..314573,314623..314890,315609..316078, 316679..316735,316785..316832)) /gene="Cbr-set-6" /locus_tag="CBG_15522" /standard_name="CBG15522" /product="Protein CBR-SET-6" /note="C. briggsae CBR-SET-6 protein; contains similarity to Pfam domain PF00856 SET domain contains similarity to Interpro domain IPR001214 (SET domain)" /note="Predicted" /db_xref="InterPro:IPR001214" /db_xref="UniProtKB/TrEMBL:A8XM60" /protein_id="CAP33735.2" /translation="MSYKELPDIRYDEPRWKRIRGNGPDRGIIPTLHFPMNAPDVIER EPEEEMRKKPHLAVILEDERNVNPNMVSLQLELTDSKSVFLFQIREWRSLRYHPYVKR TVNKKIEWLTEDSEKVICHHDQYLLYCEGVRLKNRVKKLGLSGVFVMREDSFEQIRKR SYHLALRALENYGVPQAWCKMRPYLSSRTLPTELRHYSHKHFIYTPPTNRLRMSTDIS WSRCEDYTDFKIPVYSDRPYENWNNLIFPRNVCFDYTDNNIVDKVVEPGLAEIVELAS EEGNHIKCPCKPKTEGGIANCFENPNCPCYKTNIMLRKLNSVKNNQAVYVSIYEKFSS SICFSIQNSFDPLEYNDDTPAYHNHGGFACSNICGCGGKCDNNALYTADAKIFPMEIY RQSDLIGFRVRATSYIPSGTPVMAFVGELVRDRIVEGEALDYSMQLTDMVEDSKYLLA LLAKEKVFPPTFLKQLKEIYKYDVFLDCLHQGNKSRFLMHSCVANLEPVRIYQKSFSP AHAKMILYSTKAIMPGELLTLNYGSGYVGLDKVGCQCKAFSCKNGAHAGVFSKLSVHE LADCFTAFQMESMQEYEADRERNNRKYGRFDVDLHRKDNIPIIESKPLIHRSRDHM" CDS join(320789..320848,320896..320943,320989..321105, 321151..321211,321261..321432,323218..323340, 323701..323787,323852..324004,324074..325043) /gene="CBG27956" /locus_tag="CBG_27956" /standard_name="CBG27956" /product="Protein CBG27956" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJP8" /protein_id="CAS00128.1" /translation="MDDNRLVLCSYEEPRDWALKNGQKVYCDSALKITKEVLEEILKR HPSARKLRDEGNIVRIQDDDFVVVEANNTLAVESIKFSSKRPSVIFVVWPLNLSEWNA DRTNKREPRVWVHPRKYVKKWETRKKKRVYKRKAKKEKYDEEPAQKVAKKSSVSTQKE ANEAKMELEIKEVVSNSVQNQNGDQIKTNGNLERANPSHPAVPVALIPDVDDRDWSRN IYNAVLPPPANNVLPTAPITSTPKRPVGRPPKNKDRKSARNGANGLSQELNANNGNNT YAAQQAQAPGSPAVPNQALMHQEQMMQEEQNRRTLAERARYEQLQKQNGFDYGGRPAT TQQQDYRVYPPFTSTASTSMGAQQGLGGYTYPGHSHYQQNVSTSNAAGYFGCSSSNTQ AARSSDVPAAANITGPSNGIASRSSPNGAGAVPEAANYGAYAGGYPGMNVYPTGYPGA NHEAYGGVYPGSPTHFSGRPGSNQATNGYPGSQTHLAAQPGSNQGANAYGGAPTHLVA RPGSNQGAAAYPGYGAYPGAHPQAYTGARYLEPARYPEPYHGVGAYYGGYPAANPGAA AYPYPADPVVNPDANHGAANNAGAYDGRNI" assembly_gap 322100..322219 /estimated_length=120 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(329034..329161,329207..329321,329391..329580, 329631..329854) /gene="Cbr-hnd-1" /locus_tag="CBG_15519" /standard_name="CBG15519" /product="Protein CBR-HND-1" /note="C. briggsae CBR-HND-1 protein; contains similarity to Pfam domain PF00010 Helix-loop-helix DNA-binding domain contains similarity to Interpro domain IPR011598 (Helix-loop-helix DNA-binding)" /note="Predicted" /db_xref="GOA:A8XM61" /db_xref="InterPro:IPR011598" /db_xref="InterPro:IPR036638" /db_xref="UniProtKB/TrEMBL:A8XM61" /protein_id="CAP33736.1" /translation="MAKSTTPSTQTSKVRQGRSKEASREKEWQRSQKINAAFDVLQQR IPYLRPEERKQMPKIKTLRLALQYIHHLSKLVNGNEMTNTDTNETRPLTHTDFRQTVT NELRYRNSYRERAHSQEMDPVVVQRILAREESRRRSLTFPENASSDKVIREFGPISTN VYNQFNPYQINYVAVQPQMMMMYPLNPPLNTPSPDQVNYNMLQMGDVNYPVMENAYQI " assembly_gap 332471..332524 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(338322..338409,340122..340351,340813..341975, 342033..342260,342307..342447,342867..343034, 343605..343757,343812..343922,343971..344152, 344200..344673,344726..345057) /gene="CBG15517" /locus_tag="CBG_15517" /standard_name="CBG15517" /product="Protein CBG15517" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM62" /protein_id="CAP33737.2" /translation="MSDESNDDPNRHISSADKKCSRESNTSGAGSHQTKSSSTTAWNT NAPVFTPQGIDRSGEQVLPSAGPGYHGPMHQSYVDPNYHHHPNYPYGHHPHGMMPPGH QHQQNNYQEKGYGQQPIHPGSNASRNNSSCNLPVQYYQETHHSSYQSQKAASHFHQDN NQNPLASGGGNFQHSGNKHFVQNNTQHQSQNHQLPRVGSCEPILYNSGRPDGYSDHNN LQHNQNQQSDLYYTQNIGSQVQQHMALSKNLLSEPPIREQHPSNQVHLSSGSPHVPLV NQSKPPLLPDPPIRLVKSPLVPNPFYIGPPHVIPQYIDSQSVPSSSPNMLQHRTMHHS SLPIPAECDRRDIMNNNINFPMQQPRKEIVPVFHAIHAMGQYIQSLHVINAQHAQANS YLNAQLKEYVDRETQLLHTLESISKLSSIVEETEQQLSSPTELLTPKSLNSPRSGNEK SSVEGLPNTLMASQISEQDASESNNPAKLENEETKTVLKDSKDEIDSIASLLQTIKLD QPDEQPPAISTTCALAQNADERADKSEHYFPKVEQKTTSSRDEVEKTIDFPPTETKLV AAQPITPTAKNNNSTGQKPQKQRYDESSSSKVSSKPVERRSDMKPYLPPASAYKSPLV TRSRSSEFNKLISLRNKSEETKNKSNSQTPNAKTIVSSPTPPAGNYKKTCKTSQRSNE KPADVLSNQASNVSQSQEAEEKPPVITRIIVPTAKEAVDLPLANHNAENISKKAKMSS KANKSKPKKRFSKKQFLSKNSQQKTSLEDEKEQMKELKKLELLQKAEKKERLQCLTTV RKFTKSYYNDMHRARCTYLAFWKPRPLMPEIQSEIIHFWGDRMPGAFSHSEKLEELVL TFVNNRIRRYKGSANMDIYKMFIFYLEIRSLMKVMPSFAVIMDDFLWQIDKKLSEYNQ LELDRHYYEMVSTFPEWKPRNVPSDCCKYEDFLQPPVIINEHPLRCFIAHLNLQNCMI NNLHFDPDLITDLDDHVGQMFDELTDVPVDWTPTKTKVFFRAKIAVLTAKQNKTLLER DFLQFYNFLLHVKSHVLDFDVFWYHLSCTTKKREGEEWLLTNDLMFFRLLFGDEDKWH R" assembly_gap 338959..339075 /estimated_length=117 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 340417..340688 /estimated_length=272 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(349490..349572,349622..349729,354394..354543, 354596..354677,354728..354979,355288..355516, 355582..356339,356421..356737,356789..356978, 357030..357200,357293..357512,357593..357933, 357984..358103,359007..359150,359341..359436, 359771..359881) /gene="CBG15515" /locus_tag="CBG_15515" /standard_name="CBG15515" /product="Protein CBG15515" /note="contains similarity to Pfam domain PF00856 SET domain contains similarity to Interpro domain IPR001214 (SET domain)" /note="Predicted" /db_xref="InterPro:IPR001214" /db_xref="UniProtKB/TrEMBL:A8XM63" /protein_id="CAP33738.1" /translation="MSKVDVIENDDSNKIKSENDSWASDTDTVATEQSTISVKKQKAL KARKSKSKKKGCKTQKSSRINIRIHNNQQSITMPRKVGRPPKKLPSIQTMKSKLAKFD ANCERNPNNRNLKEFLKVIGASKTGRRGRKTKAEMQELENSNQVVENRRMGNACASRK YLLMKKQRKETQDKEIRKLEKQNDKLKKTNGRIQSKLTVSIAVQLKSISDKVTEEHKD EYADLKKEVDELEEAFSTATKHGKCRIKLNKSLKSNDFKILKLKMEMKKGQKLQVYLK SVLDQQNQMNARNQNIPPLAVYNIPAAPAAIAPPVRDDDEEEVEKEEDDEEMNEDEKD EDEVVVVNVRTTRASAKAAAAEITPPAIMSANDADEEMDEDKEDEAVEIEEDEEVVVN VRTTRSSAKAATAAMTPPAIVSNDDKDEDIEEDEDMDEDLDENERGDDEKVEEDKDVA VSVRTTRSSAKAAAVAITPRAIMKDDDSDEEVEEDEDVVDNIRTTRSSTSAAAATITH FGRDDDEVQDVEEDQEVDVNAYVRATRSRFRNNTGSQLPSTSQTSQANNTDRYITPRL SDLNKIIENMSKNVRMVDWDENKVFVKAEKDRQNKVHQDPALEDYEVPLPKTPEDMNF REQAEKILAVRQGKNMNTGKVNLMRLQNRGSAIVAKTKKRVQLSANVTGNQSDVIPVY CDVAKSVKEATVPQTFAFKYSDRNVGNSLGLDEHFKKDVHMIKCDCHHQLPVVNCWEN PNCPCYRMNINLRTAVRNTNIWEAEDSETEKEAYNVDLEFIQWLLQATFGPVAVHSTT FYDAVGLACSEECGCQGCCTNNVTMWLDKKIHSFVLERKDLNLGMQLATNNYIPAHTV ISELTGEVVEQGNSDKPYSYSLNHGIDYGKVFGEELSKIVRRCSAHLKKLMEDTFEKF WDVDTKSVGNVARMMNHCCEPNVELIRIFQKGLSPSNLKLVAVTSKPVFPGEELTLDY GDGYKLDSGDLLVDVCRCGTLSCKSSPKMKLTVAQIHIGDLVKRIESLTRIPPVFQQY RFRNEDHPFVAHPIQDIKLGEEIIVMHSDLEWWELYKQSADIALQPSSERLWKARQAE SPLLFSRHQRNILLQIVGTDQCGTTGPVYRAEQIP" CDS join(361268..361649,361698..362014) /gene="CBG15514" /locus_tag="CBG_15514" /standard_name="CBG15514" /product="Protein CBG15514" /note="contains similarity to Pfam domains PF07686 (Immunoglobulin V-set domain) , PF07679 (Immunoglobulin I-set domain) (2)contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR013098 (Immunoglobulin I-set), IPR013106 (Immunoglobulin V-set), IPR003599 (Immunoglobulin subtype)" /note="Predicted" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR036179" /db_xref="UniProtKB/TrEMBL:A8XM64" /protein_id="CAP33739.1" /translation="MYFDYLFGNEKPIDNEWITKHAIIGVPVPVENKTIAAGEDLILH CEIGGIPTPAVIWARNGEYLFSGKGSFINWEEKNLNQGREPTETGIMAVELIIPCAQP SDSGVYSCLGNNLHHRIESTSHVVVEGPPKECPPKAPAAPKIVAWTESRAENQGLTAT LVCISDIPAQWTWSFEGREIIEQIGRYEIKEHGNLMIHNLLFSHLGTYYCTASNEFGN STAETYLHVTRSHS" CDS join(366117..366225,366295..366396,368529..368590, 368639..368815) /gene="CBG27957" /locus_tag="CBG_27957" /standard_name="CBG27957" /product="Protein CBG27957" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJP9" /protein_id="CAS00129.1" /translation="MSYCRHETRFCELGLALRPAKEFLPLECYLFGKVNKELVSRMVH HNNTYHNCDTQQQIGRLLLIIRERETTQNWQHNVKKIIDYVEVRVQELLRVAQNQPVA AAPAPGPSRKRQHMRAPGPAPREAAPSASGPVMMREPAPSSPPDDVQ" CDS join(370203..370383,370431..370529,370587..370648, 371020..371082) /gene="CBG27958" /locus_tag="CBG_27958" /standard_name="CBG27958" /product="Protein CBG27958" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJQ0" /protein_id="CAS00130.1" /translation="MCAKRSAEHFRAEQTTSTSKKPSFSYCSQTLCEYAQAFRDPLNR HFDMEMAQYLIGPLNINHISRSMYHNNINHQCTTVEQIGRLVVLMDSRKMYGEEYNTS EVLRKVSEAVEKIEHYYSSRGIVPEVTCLNPH" CDS complement(join(371811..371840,371888..372013, 372062..372142,372188..372985)) /gene="CBG27959" /locus_tag="CBG_27959" /standard_name="CBG27959" /product="Protein CBG27959" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJQ1" /protein_id="CAS00131.1" /translation="MASNLPSRIPVLQNRDVQIGAGVAAVGADLPPRGFDTSSFSRKP IHRCQSAQMMARLAFFQAKLNSDQNDEWMAISELNPTPPPTPQPPILTSTEPPVPSLI AQALVSPDVPNPAERPASVFSFSEVPLSCWASAESLATVLNPPISSVSVSTQTPTGFP LLAGLPRAVSSPTKATPILIQAPASPRRTTTFAEPLESLPRTPVGAIPSNELTIVQTI TYPTESPPEVMVIDSAPVLISFGPATPKAMPTIVNINVAKRGRISMSLGSGGSTFSFL KRRTKKGQYLVSKRISKKSRCDCCYGCRYCGENSHWRVVKPKWYSCWKSPNDEEFNRI ELMRFAETQV" CDS join(374026..374243,374291..374491,374534..374789, 375412..375807,375850..376107,376159..376254) /gene="CBG15510" /locus_tag="CBG_15510" /standard_name="CBG15510" /product="Protein CBG15510" /note="contains similarity to Pfam domains PF07690 (Major Facilitator Superfamily) , PF00083 (Sugar (and other) transporter) contains similarity to Interpro domains IPR011701 (Major facilitator superfamily), IPR005828 (General substrate transporter)" /note="Predicted" /db_xref="GOA:A8XM65" /db_xref="InterPro:IPR005828" /db_xref="InterPro:IPR020846" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8XM65" /protein_id="CAP33740.2" /translation="MPFEVNRFHALVFVTWQLANLAVGQYIFSIFATYVPSFKCGDGP VTRNCRIFETCNKSELVFVDEMFASAAIEFEWVCSHHNAKFNSIQFVGVLVGTLFFGI ASDYFGRKPIGVIAILISICSSFATGMSPNQHLLYVARFCGGLSIAGVLVVVCAWILE SILPHQRMVVRGFFNWGWTRIFTTLICFFAGEWRMASYVFALCLLPALFMTVFVLPES PIWLHSKGRITEMIETEKYMAEIAGVPFVPVEHHLIESKSFWAVIKTKGTFFKLFILW IFWFGVAVCGFSNDLNSGKLVGNLYMNQILFGIIIVISKVVLLFVDKNFDWFKRRTLH QGSIAGTVLCFGVLGAMCHNHYHGTGVLVVFLIGTLMIEYTWDAVYLITIESMETSSR TSTSGSCSFLARMGSLVAPILTHISTWWPLVFYITIMVIGSITFVISYFFLEETKDVD LDEVHIEKKEVSPDEIPMLDMKEA" CDS complement(join(376306..376359,376406..376692, 378243..378753,378801..378980,379027..379215, 379282..379400,379467..379533,379581..379685)) /gene="Cbr-cyp-29A3" /locus_tag="CBG_15509" /standard_name="CBG15509" /product="Protein CBR-CYP-29A3" /note="C. briggsae CBR-CYP-29A3 protein; contains similarity to Pfam domain PF00067 Cytochrome P450 contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR017972 (Cytochrome P450, conserved site), IPR002401 (Cytochrome P450, E-class, group I), IPR002402 (Cytochrome P450, E-class, group II), IPR002403 (Cytochrome P450, E-class, group IV), IPR002397 (Cytochrome P450, B-class)" /note="Predicted" /db_xref="GOA:A8XM66" /db_xref="InterPro:IPR001128" /db_xref="InterPro:IPR002401" /db_xref="InterPro:IPR017972" /db_xref="InterPro:IPR036396" /db_xref="UniProtKB/TrEMBL:A8XM66" /protein_id="CAP33741.2" /translation="MAFLIPALVALLLVIIATLWKKISNLQKFRKCDDTIPGPPAHPI FGNVSAFSGKNTAEIYEIFRKTADEFRSKGKNVIRYRFLDKLYVWPLTGKALAKVLES TTELNKGDDYKFYYSWFGGGVLVEGFGERWRTHRKLLTPTFHFAKLEGYLEVFNEESK IMIECLDKYAESGKTVDMFEYIKRCALDVICGAAMGTKVNAQYYHEHPYVKAVEGFNT LAIQHALNPLYEFDFIYWALGLKKQKDEYLHTMKKFTGDVIAERQAAIASGEVEKETS KRKMNFLDILLSSGEANILSDEDIRQEVDTFMFAGHDTTTTALSWMCWNMAHHPDIQQ KVYEELVSIFGEDPHTEVTTEGLSKLDYTERVLKESKRQTIPVPALQRKLINDMEIDG YTIPSGANVAIAPMVLHKNAEAFPDPDKFDPDRFLPDEIAKRYAYDYIPFSAGLRNCI GQKFAQMNEKVMLIYILKNFRLEPMAGFNSTKPVFEAVARPSHGIPVKLIRRN" assembly_gap 390151..391150 /estimated_length=1000 /gap_type="between scaffolds" CDS join(395246..395311,395370..396042,396194..396432) /gene="CBG15506" /locus_tag="CBG_15506" /standard_name="CBG15506" /product="Protein CBG15506" /note="contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /note="Predicted" /db_xref="GOA:A8XM67" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR013088" /db_xref="InterPro:IPR035500" /db_xref="UniProtKB/TrEMBL:A8XM67" /protein_id="CAP33742.1" /translation="MNVVPRVCTICERYQKIGNYYGVPACCACKMFFKRAIADNEMTS HAIPTKSCRMQCRECRLFRCVEKGMFIIPESTFNVNNYDKLTSLLVNLEHMQVVRTNK LETMHIFTNPSIEEIAWNGRPKFEKRPKDMTMDVTEWSFMCGITAIDYALNFPHIAEL AVYDRKLILRNCFFYLALLSDALRAVTNKQDSLSFPDGSDVIPPNTDEVSDELKKRIR ITLVGRACELQITKEETYLLSTIIMSNPSVADISPAARKSLETNQQIYTSALFQLCQA KNGASGPSRFVDLLSLCHKLENTQACFGYLSMTCAQNRNPVCMKKLFDH" assembly_gap 398658..398668 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(400097..400210,400317..400874,401048..401581) /gene="CBG15505" /locus_tag="CBG_15505" /standard_name="CBG15505" /product="Protein CBG15505" /note="contains similarity to Pfam domain PF00098 Zinc knuckle contains similarity to Interpro domain IPR001878 (Zinc finger, CCHC-type)" /note="Predicted" /db_xref="GOA:A8XM68" /db_xref="InterPro:IPR001878" /db_xref="InterPro:IPR036875" /db_xref="UniProtKB/TrEMBL:A8XM68" /protein_id="CAP33743.2" /translation="MTSIGSKSRSNKGKSVDSEKSAVRTATMESWTGAMQNQDGWRKE KEELEEELSKSKRENDEVAKKLEEAWEAAEKAEETIEDLERALQKERKTSERWRSRWE SAEGKKVETLSGNEEKSQVHASRTSSRSSNGSSVDWHDERKERKTGEYFSKKCDLKND RSESGDQRRSSIKCYKCQRMGHIARDCDAKVIHHVETDGAGRGVGAKMRERFGIIWNL IIMYFNMEAESRSTDESNVCIEECFRKGNACERGKKAEVWFQIVEDRAEILLLGTNAF EGIGVELAWKPKQEERIKELGKSPKAKWKRNAKRAKCETSSATVNHIMTEENVVENNL FCRKLMEEGCGCQKRKCTVQEGDNVCSSVQQLGVVLSAKGKGVDLEKWNLFKYSKEFQ AQVTTAEKL" CDS complement(join(405089..405168,405216..405342, 405389..405448,405491..405556,405606..405662, 405709..405765)) /gene="CBG27960" /locus_tag="CBG_27960" /standard_name="CBG27960" /product="Protein CBG27960" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJQ2" /protein_id="CAS00132.1" /translation="MPCIIATFADFGELEKNNTQNLPGFIQYKSTVHTLDKKDFDRIR GLTAIRLQSQYGLPLEIEREFRVRIWVNGEAPKFYHIYGLKICNIENMVVRFFWKPSP NNKGEEDVGQKTENNETWEKLGSLLGTIISLMTNSGELLQKFNNVI" CDS join(407653..407790,407836..407922) /gene="CBG27961" /locus_tag="CBG_27961" /standard_name="CBG27961" /product="Protein CBG27961" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJQ3" /protein_id="CAS00133.1" /translation="MFSNYSKDTAPEKKDTVPEKQKVESYLNDKSYPKTDRYPKTYEA RKAEVYKDVFGSKKTARFDEAQKKQYNHGA" CDS complement(join(409500..410500,411562..411625, 412388..412524,413790..414315,414361..414417, 414466..414593,414690..414780,417436..417600, 417645..417662)) /gene="CBG15502" /locus_tag="CBG_15502" /standard_name="CBG15502" /product="Protein CBG15502" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM69" /protein_id="CAP33744.1" /translation="MATFMIEYVTRFKVRFEAVIVKHQQDPLSNGVLNELQLTRARRV VNAANVLLAMGPDAIRIVFLLRGSIVNDAEGHKIKAPYFWRVQNFIGSRIAYKHTFIK ATAEKKAMWEKDHQLKDGFDRFENAGEDDSVFVSEPQNFVVRSSPNLGLFSLAALQVV EDGLVIHWPVINKDNNMEVEDQSEGGTERDASEEADVQIQEEEGDEEGGEISVGNTLE TREGEETEVQKLQAKLYAAERKLVEERNHRKEELAEITKLHQSLVAEKEELRLKNLTN QAKIKELENQHWADRKEVEDLKKMMDRDVIAERKKNDALQAAIAEAEKFFEMERSAMK PRRASRRHTAANHTAEPVGSTPPEPPTSELSGRKSGARGKSANAARKSCPRGSATTAK KYTDCRTRSYFGEENADALLEQLTTAIQCLEIVTTDRNHLVYDQQTNDSSPNAVSTEE ATATSPPNMDCSNTANNVSLPTQDTRIQSAADTPPITVDVRQAELINKALIDELQMLQ VQVHQANRAKALETQHRLQMEADLKHKIHQLMSGQENLKRAPAFLPTTASHDATVEMP SSTHNVVHNINVSHNSTHDISNHSSATEDMLANIMTAVSHLTAQQERSKQQNMLRTAR LEQLVKKLASADHDAHSSEPMNSKVDEFETQNANEEQYYTRTAYSDSKSRSRAHRRSR SRSYSPKDDRHSSHDLKLNLDFSVKFIEQFTGSENFDAFIQSFDRG" CDS join(423730..423822,426614..426750,426797..427047, 427092..427209,427260..427855,427905..427987, 429666..429743,432171..432280,433825..433888, 433930..433980,434135..434305) /gene="CBG15501" /locus_tag="CBG_15501" /standard_name="CBG15501" /product="Protein CBG15501" /note="contains similarity to Interpro domain IPR015429 (Cyclin C/H/T/L)" /note="Predicted" /db_xref="GOA:A8XM70" /db_xref="InterPro:IPR013763" /db_xref="InterPro:IPR036915" /db_xref="UniProtKB/TrEMBL:A8XM70" /protein_id="CAP33745.1" /translation="MSSTSTESWYSRLERKGEEVDWEKFRVTKEQLETWTRSRHDGIS HKDEVNQKGTACDLIYKYVDHFPKTEESHAHYLQITAVASVILHRYFIIRSIRNREMD EVAAGCVMVACRSARVYNVSDIVLDYLGSLKYGSRKVHYQCQLIEMMCAAERDIEDAI GFDCLVTIPHEHLAKMLKVLDEKVKFPEIHCKSFLLATELLLITEWTLTHSPSTIAIV CIRMALTAHKLNRAKFVPEGVMSDWFKLFDTGVTESLLFEMIREVLAHQRVKNDETSR LSKALCLTPTPRTTRKGTMPKTRTSKSSKKKSSDSNGGEECQVPGGIPALMGIRLTPN FIPKGTQKSVESSVQCIRSKSTKYELKIPKDYKRKMGSSRRGKRKDSSTKQNVQGMTG DGSSGTAPEQVDNTASPEANPSNSDTSQNIQNLKLKTTSKLLQYLNSLCWLRGDRASL PVKNHGKLDSLIASAVSRLENNVAVLLLIALMPPTQKLRNTKMQQPEEPEIRFNLTRA ALYYYNNLLHGCNTQTCCLARLGMAGTPRFEELTHACRLLRLILNVGRQLFSANGYFI VNSKIQEFDRIDRDFIF" CDS complement(join(435339..435416,435493..435576, 435694..435909)) /gene="CBG27962" /locus_tag="CBG_27962" /standard_name="CBG27962" /product="Protein CBG27962" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJQ4" /protein_id="CAS00134.1" /translation="MPGTNFNAQLDEVIRERDQLRERYSQAMLIIKTQQNVIKKMVND FKTTFESVDQLEKRCNDLVVKFANLRIEGIPTCDETVHATNVSVNAAIGSEQEIAESE AKAIKKSGGRPEGEDDNIGPRDI" CDS join(438304..438558,438885..439118,439174..439347, 439404..439570,439953..440324,440384..440458, 440640..440817) /gene="Cbr-mes-6" /locus_tag="CBG_15499" /standard_name="CBG15499" /product="Protein CBR-MES-6" /note="C. briggsae CBR-MES-6 protein; contains similarity to Pfam domain PF00400 WD domain, G-beta repeat contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR000875 (Cecropin)" /note="Predicted" /db_xref="GOA:A8XM71" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR036322" /db_xref="InterPro:IPR037352" /db_xref="UniProtKB/TrEMBL:A8XM71" /protein_id="CAP33746.2" /translation="MPPKRQTPKPENGPKEPSAEQLKVDRSFAAMKLEKCSGKEDLED RPFVFTAESQLEQGFPLYGCAFNPYVKPQHRQMVAVCGGIGAHVFLVPHDKNRLEHIW GVSFEQPADPTKKDRKEELLTVTWAYDTYDADQGRAAFRVVVAGVLGHIYVVDFKTRN LCNRLRSYGGDINDIRVSPADSNLIAGASSDQTIRIHHIRNQGALITIGGPFSHPGPV LSVDWNSEGTYLLSCGFDHQVMKWDLTAEPAKSWLEKTCKELEKGKKDIYFQSGLDQK SDNTLELYTPVAQISDLHHDYMDCIRVLPDSDCFASKSVSYDPHLNISKLGLPGNMRT HDRGAPLEPERNAFPLMWFAIGEGKRWFHKFSIDPKRRWIAGGGDEGSIMFFDLNDEQ HTEDGKYITKPEPNPPKPYSDQPASSESLPHPSRVRYYKVSDVGIRNVDFSPCGRYVV AVTEESSIIRMDRVAEDVAVDKLTEYLGVMGITK" CDS join(442976..443017,443066..443104,443148..443354) /gene="CBG27963" /locus_tag="CBG_27963" /standard_name="CBG27963" /product="Protein CBG27963" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJQ5" /protein_id="CAS00135.1" /translation="MPALPRKNMSKETEGYVVSSLKAMKHIIKTHPNVNPISKHFLQQ MKLILKINDLRPKKQRRDEIVRIAWDVNLWAVENRLLDGRNKPRRRQRLTN" CDS complement(join(443683..443787,444124..444354)) /gene="CBG27964" /locus_tag="CBG_27964" /standard_name="CBG27964" /product="Protein CBG27964" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJQ6" /protein_id="CAS00136.1" /translation="MADKEHNLLEKNLRMFDVVSLQEWRRAEDIRQFNRAYNNLVKQE KKMIALRDECERQIKELEETQRRKGELRKIEKELHELPDNKEKEDDVEKNKQNPNVGK PNSEAIVKL" CDS complement(join(445088..445198,445265..445519)) /gene="CBG27965" /locus_tag="CBG_27965" /standard_name="CBG27965" /product="Protein CBG27965" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJQ7" /protein_id="CAS00137.1" /translation="MREHPAAFKYLSDPARAERLMEAVEILHRNARQELRELHERMEA LNRRQERLRILAQQIDEFNNNANTDTTEQQIRQEMMNLNLDVGRGAVQHVEEPVVEEM EHNDQVMEERTEEEKQTNN" CDS complement(join(447745..447792,447944..448363)) /gene="CBG27966" /locus_tag="CBG_27966" /standard_name="CBG27966" /product="Protein CBG27966" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJQ8" /protein_id="CAS00138.1" /translation="MGQRKVKKPITQTISSREEEPADGPPEPAEPVMVLDDDANNEPK EEPILTVVPLVQVFGNLNILRQNEPEAQEAPQNGAQQQNLTEVLVVDLRNRSIDDMVD VIMRWSQGNRDGFIRHEVVEHEGALVPVERLEEIKNNQAAAAQGDRPEPPPTS" CDS complement(join(450079..450228,450299..450427, 451480..451566,451619..451834,452222..452248)) /gene="CBG15494" /locus_tag="CBG_15494" /standard_name="CBG15494" /product="Protein CBG15494" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM72" /protein_id="CAP33747.2" /translation="MRIWICEVLMIPEPLREEPKVDAGLGVSDVPPPAAPEPEPQPEP EPRAPTPPPLPPRPGQRPLTPPPVPPRPHAQARLRAREMSPPPRALGLPQNMEWIHRF RRARRDEQRGRGDAGLGRGQNIDRPGRQLDEDQILFLQRLGVRQRREFLDMILDGQFP LPNEAFENPFGDFVPRDVPIEIMEEDMGFFDDDGIVDDEDGN" CDS join(456260..456307,456452..456616) /gene="CBG27967" /locus_tag="CBG_27967" /standard_name="CBG27967" /product="Protein CBG27967" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJQ9" /protein_id="CAS00139.1" /translation="MDNIVHQPRNMPDNELADPEVPQEVMLFFREIKMIGEMLYVIGC EPRSHNGRYRQPLQTILAALSSPGST" CDS complement(join(458310..458423,458476..458703)) /gene="CBG15491" /locus_tag="CBG_15491" /standard_name="CBG15491" /product="Protein CBG15491" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM73" /protein_id="CAP33748.1" /translation="MTPEPLREEPKVDAAPGLGVPDFPPPAAPEPELQPEPEPRPATP PPLPPRPGPRPRPLTPPPLPPRPHAQARVRAREDSPPPRALGLPQNMEWIHQFRRARG DQQVRKILFAN" CDS join(465047..465094,465140..465202,465241..465441) /gene="CBG27968" /locus_tag="CBG_27968" /standard_name="CBG27968" /product="Protein CBG27968" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJR0" /protein_id="CAS00140.1" /translation="MDNVMHHPRNIPDNELDFLEVILQALAHYLPVLRASFADPEVPQ EVLLLFREIKMIGEMLYVIGCEPRTQNGMEIIENLYREFRQLYHRLQHNVGFFQELFN N" CDS 466656..467237 /gene="CBG15489" /locus_tag="CBG_15489" /standard_name="CBG15489" /product="Protein CBG15489" /note="contains similarity to Pfam domain PF00320 GATA zinc finger contains similarity to Interpro domain IPR000679 (Zinc finger, GATA-type)" /note="Predicted" /db_xref="GOA:A8XM74" /db_xref="InterPro:IPR000679" /db_xref="InterPro:IPR013088" /db_xref="UniProtKB/TrEMBL:A8XM74" /protein_id="CAP33749.1" /translation="MNSQLAPISTGSVPDTPIPYSYADAHYWNSGNLNWNYLNTQATD YSDYTLYSNYYAYYYAQFFQSLSSNVSTPSPTQIPQREPATMLPPLNFDFNATTPNPS SPSTSSTLAPMQLSAEMPIQSLTTVTCESTSRRDSKTRQCTNCFVTKTSLWRNVTSSE GILCTACFTYKRKYKKNRPTKAIERYMRRNRNL" CDS join(469520..469584,469958..470093) /gene="CBG27969" /locus_tag="CBG_27969" /standard_name="CBG27969" /product="Protein CBG27969" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJR1" /protein_id="CAS00141.1" /translation="MSSTRVKETVIDEAITTQPLPLRWSPQPPTQTDSDKKCCGSCCL CLQVVACVAEIFWALCPCRKSE" CDS join(471183..471218,471267..471458) /gene="CBG27970" /locus_tag="CBG_27970" /standard_name="CBG27970" /product="Protein CBG27970" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJR2" /protein_id="CAS00142.1" /translation="MKFLAARIRNMHFQVGVIDRKVVFLQGFENLVAHILTIFENPRT PEAESELMESIDGLNAFAESEEFQMAFRFQL" CDS join(473084..473141,473271..473384,474204..474361) /gene="CBG27971" /locus_tag="CBG_27971" /standard_name="CBG27971" /product="Protein CBG27971" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJR3" /protein_id="CAS00143.1" /translation="MSLKFLLLLNFLCLLLIISDDCDSRLIWSLESNITDRLSAILKK GFTYKGCQETFNKEDIIDIAEEIEHEFNLYWNITTIQINNTTTDSIVEVTEGDSNEDS DEGQSCL" CDS complement(join(475238..475498,475651..475815, 476142..476327,476415..476660,476714..476779, 478302..478526,478574..478666,478713..478796)) /gene="CBG15486" /locus_tag="CBG_15486" /standard_name="CBG15486" /product="Protein CBG15486" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM75" /protein_id="CAP33750.1" /translation="MSSWDPPLDIQAINTTGFLCSLDDQIVKFYTLEYGLLELPISDN GEKLVLGKWYSIFEGDYETHFDFEMTDCKVWANTVGQVFAQVMAIGPNEFALPREIRN KYRMAVWSPFLKFLDDKEDLFNSTFRGGDVGEPWTMEFLVTRMEPVHVLHPALPIVNR YGLTVKNDVTVGICIKVDVNNPAYCAAVKGSLEKCGLLFSPKFGLTKWLIREMEVSKH VHKDKHVTGALRSTDEPSFKLGKWYKYQLRDNRHAKSRAQKFRSKTVEDLGPTDTVFY NTTAVQVKEVEPQKHTCLINGNVEMDASFAFNHKMLEDPENQEQPWEIRSQQLSKSAH FVDVDIGXXXIHPNDSQXILQKIEAHRKMLEEKYPNDYTHLKNKTLIVRATVKVHDRF MENSEDYPNHGIFIVRKITSIFYLNRGKMIYDSEKEKETPNLHFEKLTL" CDS join(480457..480494,480546..480638,480706..480994) /gene="CBG27972" /locus_tag="CBG_27972" /standard_name="CBG27972" /product="Protein CBG27972" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJR4" /protein_id="CAS00144.1" /translation="MSKNCEKSKKLKKHTEISKAEKDEQDFDSWLWGQMFYSDCYMRN FEEQKKIYLTYKELKEKGRLEEFKYERAGNSGDLTLLEPEMEKIRIAEEGAKKAEAVE KEKEEAWDSKDRRPWETDKEFRRRIHHPYSDSSASDD" CDS join(484065..484180,485178..485184,485457..485627, 486699..486764,487447..487632) /gene="CBG27973" /locus_tag="CBG_27973" /standard_name="CBG27973" /product="Protein CBG27973" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJR5" /protein_id="CAS00145.1" /translation="MDQRRFNIADLNSHSNFKHEDNPKAKSTRIIDSGRTEYVEERIF VSKPNRDKKKCDEYYPKHYDDTTEDIPLLTETLKKYHTSSWTLTQWTLTLHRFPCAAS PISVCRFSSDRATNSVCNLLPRIQLTTVLRMWINSIRNTIQRTTGNVSSFLTTIIQLQ VIFMKIIAPRRTNVEFSGMRD" CDS complement(join(489275..489580,489627..489833)) /gene="CBG15483" /locus_tag="CBG_15483" /standard_name="CBG15483" /product="Protein CBG15483" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM76" /protein_id="CAP33751.1" /translation="MFEHEVNNNLELVYHLEAMKEVLKITRNISSCFGHDVQCKLSKV VAFFLEAADFVGSKVYGDAFSCFRDSNIIEIGQSCSEIDEFERGFREMPVNYTILYQK CEEGVLKCAARRLYPTPSCSIGRLVHLYQAFHVGMQSVLLGQQFMNGDPVVLDFDASK YCNNGRNFKH" CDS complement(join(492571..492663,492711..492914)) /gene="CBG15480" /locus_tag="CBG_15480" /standard_name="CBG15480" /product="Protein CBG15480" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM77" /protein_id="CAP33752.2" /translation="MEHGLNVNPKVLYELKLMTEVSKVTQNVSRCFGHEVQCKMSKLV AFALAAADFVESKVYGDAFSCFRDSNIIEFNKSCVEIDTLNNDFRTMPPVNCTI" CDS complement(join(495540..495755,495802..496035)) /gene="CBG27974" /locus_tag="CBG_27974" /standard_name="CBG27974" /product="Protein CBG27974" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJR6" /protein_id="CAS00146.1" /translation="MENFALMMMLPHFQYPAVQLNNEQTRQINRWIRHTAPNNADVIR HLVPFLLPFCNYSMNSVKNYLERGLGMTFRRNQQPTQPVRLTEDSCSDTDGEDEYGPT SRFNQKTVESDFRDAGEDEEMDEDEFDDEELEEQEEIENEEPVPRQN" CDS join(497219..497307,498707..498911,499102..499166, 499304..499346) /gene="CBG15478" /locus_tag="CBG_15478" /standard_name="CBG15478" /product="Protein CBG15478" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM78" /protein_id="CAP33753.1" /translation="MAYTSYFEALEECQLSSLEYRRLYNDLAYTIFRFLFLLKKLQFK MSNTIRIYSCTHVSETLPSETSCYCRGLKRRILNVDFRNVVFLKRRILKRPGAESREN GKTTKRYIKVTKQERILNFFNVFFIQVPVTE" CDS complement(join(499900..500055,500103..500366, 500414..500584,500629..500743,502072..502178, 502221..502301)) /gene="CBG15477" /locus_tag="CBG_15477" /standard_name="CBG15477" /product="Protein CBG15477" /note="contains similarity to Pfam domain PF02535 ZIP Zinc transporter contains similarity to Interpro domain IPR003689 (Zinc/iron permease)" /note="Predicted" /db_xref="GOA:A8XM79" /db_xref="InterPro:IPR003689" /db_xref="UniProtKB/TrEMBL:A8XM79" /protein_id="CAP33754.1" /translation="MGSLGYKLLLALGILFANGLGGFFTITAMRCMSRAKTVNTYAQS FTAGIFLGIVFLMLNPELPIEEADFNKKYNSKSHTSITSCSAVFGIIFMLLIDSTIKA IREKKKSLEDVEMSELPLASSMTVISPPPDNLYKFVLFATLMSVHSLFEGLPIGYKDA KEDILSYGLPMLLHKFLEAMTVASAGYKEKKVHAILGCTIHSLMTPIGSLIGLTLTGE HNNLMVDVALLVVMGMSVGTIVYITFMEILTPLMENPEFKGVGEFKKIGAILGGFLAT VAISAVIGTLESHQATSGTAI" CDS complement(join(503787..503954,505897..505947, 505990..506043)) /gene="CBG27975" /locus_tag="CBG_27975" /standard_name="CBG27975" /product="Protein CBG27975" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJR7" /protein_id="CAS00147.1" /translation="MATKLNCTEKQTLTNKRLISAYNQRFEIKEEMDAIKKIEFGEQT RRYRQLVVQLTYIDNIIAVGESEYTKQRLQTVGKLYCVLRTHQIPN" CDS 506556..506645 /gene="CBG27976" /locus_tag="CBG_27976" /standard_name="CBG27976" /product="Protein CBG27976" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJR8" /protein_id="CAS00148.1" /translation="MQQIIILRKTHKSREPVKETLKEQMRQKR" CDS complement(join(507165..507392,507574..507680, 507724..507960,510176..510306,510359..510477)) /gene="CBG15474" /locus_tag="CBG_15474" /standard_name="CBG15474" /product="Protein CBG15474" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM80" /protein_id="CAP33755.2" /translation="MGLLRRIMRRVNFYRTKRMPLQVLDCQVIYFLWHGNGCTYGPYD VEAMKRFDAVGKLHHPSRIQIIECTRKSSVGLLEWFGSVEDLRKLFGRDDCFPKRLSQ FIGKWTLPEIIPNPALYRYEPINFRTFNLSSFLSNLSTSTRCPFVTGTRDPSVTDDQI LPLSSIVDVARRILIEYGNLDPDERQLLHILLSEYFSPAVIKYQRIFTIDFDYLKIRH LLDDVKRYTFERKLGRQLAKIAANQHQQSSPSSASSSRQLGWMQAPSYYQGIELQ" CDS complement(join(514210..514281,514344..514448, 515840..515966,516017..516099,516145..516240, 517064..517183)) /gene="Cbr-ubc-21" /locus_tag="CBG_15473" /standard_name="CBG15473" /product="Protein CBR-UBC-21" /note="C. briggsae CBR-UBC-21 protein; contains similarity to Pfam domain PF00179 Ubiquitin-conjugating enzyme contains similarity to Interpro domains IPR023313 (Ubiquitin-conjugating enzyme, active site), IPR000608 (Ubiquitin-conjugating enzyme, E2)" /note="Predicted" /db_xref="GOA:A8XM81" /db_xref="InterPro:IPR000608" /db_xref="InterPro:IPR009060" /db_xref="InterPro:IPR015940" /db_xref="InterPro:IPR016135" /db_xref="InterPro:IPR023313" /db_xref="UniProtKB/TrEMBL:A8XM81" /protein_id="CAP33756.2" /translation="MSNIAMTRVTRECKEVAQASDITEAGIHVEMTDNNITDIKGLIK GPDDTPYADGMFEVHMSIPDQYPFEPPKVKFVTRVWHPNVSSQTGAICLDILKDKWAA SLTLRTVLLSIQAMMCAPEPSDPQDAVVAKQYISNYPMFKATATYWTSVFADSKREVD KDFQKKVNRLVEMGIREGEAIGVLSCNNWKLEKAVQYAFG" CDS join(517855..517959,519197..519292,519339..519415, 519461..519539,519588..519695,519838..519975) /gene="Cbr-ubc-22" /locus_tag="CBG_15472" /standard_name="CBG15472" /product="Protein CBR-UBC-22" /note="C. briggsae CBR-UBC-22 protein; contains similarity to Pfam domains PF00627 (UBA/TS-N domain) , PF00179 (Ubiquitin-conjugating enzyme) contains similarity to Interpro domains IPR000608 (Ubiquitin-conjugating enzyme, E2), IPR000449 (Ubiquitin-associated/translation elongation factor EF1B, N-terminal), IPR015940 (Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)" /note="Predicted" /db_xref="GOA:A8XM82" /db_xref="InterPro:IPR000608" /db_xref="InterPro:IPR009060" /db_xref="InterPro:IPR015940" /db_xref="InterPro:IPR016135" /db_xref="UniProtKB/TrEMBL:A8XM82" /protein_id="CAP33757.1" /translation="MANADNSMAEFITDLELASQMYGIEVVNEDEKQVKIHVAGIEST PYAGGIYEVVFNFPVNYPEGIPHVTFKTPIWNSAVDPKSQNVHFLGSETWNLITAIAY VEDLILKTKVDEFSTYFRVARFWACQFAGAPKSPEDIQLKSVVDQLVDMGFPVHAAII ALSNSEWNAEHASEELLRGESGVEAGNDREEADPTSPDEH" CDS join(528795..529019,529616..529745,529959..530026) /gene="CBG15471" /locus_tag="CBG_15471" /standard_name="CBG15471" /product="Protein CBG15471" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM83" /protein_id="CAP33758.1" /translation="MPYSPFEELSDCTLYGLFKLAIEKRTNAINNRCQNLHYRTTNTK FTISLQKILRQHRDYLIRRRRLLPVDPSETQATNATTSEEPASKRLRIFVEQQSAPTT SSVGSSSVESTAAPVEDPAQHVSTPGYCTILVKNAFPN" CDS complement(join(530271..530285,530387..530629)) /gene="CBG27977" /locus_tag="CBG_27977" /standard_name="CBG27977" /product="Protein CBG27977" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJR9" /protein_id="CAS00149.1" /translation="MNQSHQTLVRLIQSSHVKLDELIEAFDNLRLIAININFARVLEE YRVEMAENMDPNEFGEVNEEEDDVSESEPVPKRPKLQENSN" CDS join(531581..531690,531855..532029,532077..532212, 532259..532347) /gene="CBG27978" /locus_tag="CBG_27978" /standard_name="CBG27978" /product="Protein CBG27978" /note="Predicted" /db_xref="GOA:B6IJS0" /db_xref="InterPro:IPR008967" /db_xref="UniProtKB/TrEMBL:B6IJS0" /protein_id="CAS00150.1" /translation="MWFNGRQSRFLETESGIAVMLENYDIYNSYKPIRQQLPPNSNFD PNREFNDRLFKERNYIIYHPKGIRTGKEWAKSKVRFHIRITSNPRLLDSLTSLLNAKT VYCTTLLINQMRKDNNGVIQTVFSTEFCFECLRFQTQFEKVPLVLDEITLESDSGDNE SGEGTSSSG" CDS join(537220..537288,541054..541169,542198..542432, 542484..542801,542848..542990,543090..543278, 543326..543500) /gene="CBG15467" /locus_tag="CBG_15467" /standard_name="CBG15467" /product="Protein CBG15467" /note="contains similarity to Pfam domain PF07984 Domain of unknown function (DUF1693) contains similarity to Interpro domain IPR012937 (Domain of unknown function DUF1693)" /note="Predicted" /db_xref="GOA:A8XM84" /db_xref="InterPro:IPR012937" /db_xref="UniProtKB/TrEMBL:A8XM84" /protein_id="CAP33759.2" /translation="MYSSSRPTSSDQQPQSMELGKYENKRLNKVMGMVELHSKNPDNG VIRVDLKILLQKLFGKLNQYEIPAENAFLVGGGASYVLNPRCSYSDIDISIPVSLSNT YKSARTIFAFIMKAVLELIQELSHAVRDPMSYLQKAIRIEQNVRTNYWSLFALRNEEG RHVELKFVLSIPREFIFFSDSIEIDLTNFAKKNCVTKEKKSEKENHVPIAIGSNQKAE DAEPTGSDDEKKEYLPSRISSSYKDLRKAVSDVKSRRIDTVEPNMIRGGGFLKYAHLK TKGFVDSRDGQDLEKLLEGMVSGFLSEFNESKYDVLSQYMRNHFDTHHFPKKFKFLDE LRSLCCHLEKFNIKDAMETRIERIHEEELGKMAILRATNRHAIVMPLLDADDGFDYSS DAAHPFFPYLYAINWKFPFFLF" tRNA complement(544360..544431) /gene="CBG28934" /locus_tag="CBG_28934" /standard_name="CBG28934" /product="RNA transcript CBG28934" /note="C. briggsae predicted tRNA" tRNA 544621..544692 /gene="CBG28407" /locus_tag="CBG_28407" /standard_name="CBG28407" /product="RNA transcript CBG28407" /note="C. briggsae predicted tRNA" tRNA complement(545390..545462) /gene="CBG28445" /locus_tag="CBG_28445" /standard_name="CBG28445" /product="RNA transcript CBG28445" /note="C. briggsae predicted tRNA" tRNA 545627..545698 /gene="CBG28898" /locus_tag="CBG_28898" /standard_name="CBG28898" /product="RNA transcript CBG28898" /note="C. briggsae predicted tRNA" CDS complement(join(545977..546189,546237..546762, 546812..547119,547699..547908,547958..548011)) /gene="CBG27979" /locus_tag="CBG_27979" /standard_name="CBG27979" /product="Protein CBG27979" /note="contains similarity to Pfam domain PF00789 UBX domain contains similarity to Interpro domains IPR006577 (UAS), IPR001012 (UBX)" /note="Predicted" /db_xref="InterPro:IPR001012" /db_xref="InterPro:IPR006577" /db_xref="InterPro:IPR009060" /db_xref="InterPro:IPR029071" /db_xref="InterPro:IPR033043" /db_xref="UniProtKB/TrEMBL:B6IJS1" /protein_id="CAS00151.1" /translation="MNFDFLNSEEQRKLNQFMEITDSEDLDSAYQLLVRNRWDVEEAI GTFFSVGFSSLTVSENNRNDEASEEFGFADNEIPEIPIREPHAVESLMPSGNQTVLEK VQDFVRNFENQYSAADITLPSFYTDTLENAIVTAFNHDDKKFRKPMILFINNEDSTLT ENFVKNVMCNQFVTDFSKEHFVLFPWDITEDSNLIQLCQMLTECSMRAIQEDLQNAAF SFSDRANFPLLMIIHRKRYSFEVIRKFNGRSDLNEVVNGLHEAYEIFQNDQLAEISKD LQQKEARELLVQQNAAYEQSLQADIERINSEKSLKEMEMEKKRKMELEQKKIAEEEDE RVKNLSSQMPVEPDDTNPDCITVRFRLPENGIDTRRFLKTDSIRTLINYLETKRFFKE KFTFLNSELPRKDIIKTFALEKSFFEANWPKKETVLVEMKKSDD" CDS complement(join(548342..548473,548518..548670, 548728..548814,548860..549006,549054..549326)) /gene="CBG15466" /locus_tag="CBG_15466" /standard_name="CBG15466" /product="Protein CBG15466" /note="contains similarity to Pfam domain PF00079 Serpin (serine protease inhibitor) contains similarity to Interpro domains IPR023795 (Protease inhibitor I4, serpin, conserved site), IPR000215 (Protease inhibitor I4, serpin), IPR023796 (Serpin domain)" /note="Predicted" /db_xref="GOA:A8XM85" /db_xref="InterPro:IPR000215" /db_xref="InterPro:IPR023796" /db_xref="InterPro:IPR036186" /db_xref="InterPro:IPR042185" /db_xref="UniProtKB/TrEMBL:A8XM85" /protein_id="CAP33760.2" /translation="MASLSGLETTFGIDILKLVVTQESYVFSPISLLFALALLGKEGF NSTVADTYSAYGFHDPDVYNYLKKNLGDILVRGDSGVNDARRNLGNETRILFNQAWES KLPLKRTGVFYSSDKKLKQIIYLKNEKKVLLGIDDVFQMISIRYNDRNLNFVVLLPRE TFGLQKALKKLTKSRLETLLHDATVELVHMMIPKLDILQMVINSKQLGLQAPIKTSLK YKHSPRVAGMLYRPDNREPYFFKADHPFVFAVSRKGRPVYFGVYL" tRNA complement(550375..550446) /gene="CBG29081" /locus_tag="CBG_29081" /standard_name="CBG29081" /product="RNA transcript CBG29081" /note="C. briggsae predicted tRNA" CDS join(550882..550954,551181..551511,551874..552180, 552229..552299,552955..553048,553316..553663, 553714..553835,553883..554036,554688..554827, 555406..556014,556061..556177,557047..557158) /gene="Cbr-sec-15" /locus_tag="CBG_15465" /standard_name="CBG15465" /product="Protein CBR-SEC-15" /note="C. briggsae CBR-SEC-15 protein; contains similarity to Pfam domains PF08700 (Vps51/Vps67) , PF04091 (Exocyst complex subunit Sec15-like) contains similarity to Interpro domains IPR007225 (Exocyst complex subunit Sec15-like), IPR014812 (Vacuolar protein sorting-associated protein 51)" /note="Predicted" /db_xref="GOA:A8XM86" /db_xref="InterPro:IPR007225" /db_xref="InterPro:IPR042044" /db_xref="InterPro:IPR042045" /db_xref="UniProtKB/TrEMBL:A8XM86" /protein_id="CAP33761.1" /translation="MPNSSSTSQANITGSETASTSYVNYVEMSAEQEYFLYELETTDS GSMGLVLRAIYDTGDVQQFARALQQRISHYDKNIQKVCSFHYQSFVDAMQELMQLKEQ CQDIKDETVQIDAEIQCISQRLCAKKQEIVRYRKLMKNAKTAMDQIAVCLPVLENYAK LQELMSNKKYYQALKTLEELEHTHLALVEKYRFTQVLAKSMTPVRLEIKDKAYSEFKD FLENIKKVAGRIGKHASKDTAEQHSFGVTDAERARKIQEEARKNASNVEIEVSADGSI VKKNVSPKRYPQAQVEDSPSFFQDDEQVSAQDLIDFTPVHRCCQIFNVLGAKEEFEQY YRQQRREQCDLVIRPSHKMNNFKHYVEYLDEIVGFFVVEDQILMTQSNLSTAAEKDKL WDNALLKIRHHLDARFGGCPDVEMMLRMKKVILLFILTMKSYGYAVAPLYELLQNFRD QYNEILVKEYCAQFERDLDKDNYTPITVNSEEEFRAVIRQFPFYKRSMEQEPFPRKFP FSRFVISAYTQAKQYLIGCLKFMDNLQLNTSAVDDTVRRCANVLLGRWAGILKSFVYK RLSMIQLVQITINLGYLEKSCESLGAFITSKTSGEEAIGTTSHQVVLSEKVFRDVRSE VEQQIDECMRSKVDEIIELSNYDWELPAAAGQASDFITDLIKFLLTTFQSFTNLPSGL AKHVCTQTCKHISQSLSDLLLSPETKAISTGALDQFSLDVMQCEMFTTRCPVVGVDPQ TLSMTFADLRQLLDLVMSSDWTTFNAEYGKDHAKYLRVKASTAIVVLEKMIEYERKST GFFGIARGDRKRLLDTIVRQLKLLEIQ" CDS join(558637..558837,558879..558992,559039..559136, 559186..559687,559735..559803,559847..560011, 560060..560228,560302..560447,560493..560648, 560693..560803,560894..560932) /gene="Cbr-ifd-1" /locus_tag="CBG_15464" /standard_name="CBG15464" /product="Protein CBR-IFD-1" /note="C. briggsae CBR-IFD-1 protein; contains similarity to Pfam domain PF00038 Intermediate filament protein contains similarity to Interpro domains IPR001664 (Intermediate filament protein), IPR016044 (Filament)" /note="Predicted" /db_xref="GOA:A8XM87" /db_xref="InterPro:IPR001322" /db_xref="InterPro:IPR036415" /db_xref="InterPro:IPR039008" /db_xref="InterPro:IPR042180" /db_xref="UniProtKB/TrEMBL:A8XM87" /protein_id="CAP33762.2" /translation="MKTARRVFNPVLAKIIESETALPSGITSTGALSGFAQQAANTLR DNRNREKQEIADLNNRLARYIEKVRFLEAQNRVLDADVGLFRQAAYIHSERIAVYYEA EKTSLVTLSREHDQKTSTHKQDIRRLEPEIATARKNWESSVEHRRSLRLEKRTQLKRL SDIEAENAFVKRLINECEEEKTHLQAEISRIRAEIKKILAKRDKERSGVSRNQQSAQD LLKKLSASISSHEIAIREEISNARRNSTDKNREYFHRELHLAMKEIRDQFESNAKSSR KTWEEWYKKKITHIKEAGKKFETTQIQEREEVIRIRVIVNELRTKITDADTMSSQLAK RIEEMKHRADEELRMFEYALNEKVFSVNKMKEECMRMQVMIEKLLEYQTNLRNEITHY RKLIDNAENLRTTYQSNFVIDTPSPVMRNTTSYHSNGSAFTMNVQESHYSEPYFSSMS HASYDISTTNRDSYDISNLSSINSQQFRSYSRGDVKLIEHKDESIVIENSNNYKSKDL SNWKLQHYVDGALRGTFIFPVATHIHPLEKISIHSLASSNLLDDLVATGIYSFDFSKK TKSVLLDDADEEVGWYAHVSYSH" CDS complement(join(561956..562093,562140..562194, 562246..562304,562350..562508,562553..563062, 563540..563785,563845..563955,563997..564077, 564125..564223,564274..564361,564407..564528, 564965..565056,565109..565214,565306..565432, 565492..565607,565656..565728,565774..565844, 565902..565970)) /gene="CBG15463" /locus_tag="CBG_15463" /standard_name="CBG15463" /product="Protein CBG15463" /note="contains similarity to Pfam domain PF01595 Domain of unknown function DUF21 contains similarity to Interpro domain IPR002550 (Domain of unknown function DUF21)" /note="Predicted" /db_xref="GOA:A8XM88" /db_xref="InterPro:IPR002550" /db_xref="InterPro:IPR014710" /db_xref="UniProtKB/TrEMBL:A8XM88" /protein_id="CAP33763.2" /translation="MIIKILFLFFLLCIQNVRIDGKLDVKPTVSGVRVESDVGAPGFL GYSDAGEIMVEADSIVDIVIFGHGLEDVDMVAFTDSVCVTSEFNISESTFYIHKDMKI VFKYSFVAWPTPWRICLKSESHGLIQIDDDRTWIQAVEKTHETYMPIWMQSAILCLLF SISALCSGLTLGLMALTPQELSILMKSGTPSEKKYASAIYPLRIHGNRLLCTVIIMNV IVNTGIALLFDDMAEGLVAFVASTVGIVIFGEILPQSICVKYGLAVGANTIFITKFFM IILFPLTWPLGKILDKYAGVDIDVVNRSRMIEMLKMNMENEACDIDLSTLKIAIGAME LIKKSVKDVMTDIDDVFMLSEDQVLNAETMTKISDSGYTRIPVYEGNNRNKVKNLLYV SDLALIGKDNNITVKAVAGFNKRRLRIVDEHMPVTALMDEFKMGDYHLAMVAKAHDVK KHHHGKFVDDKMDNFIMKSMKLVEATMLPEAPEEHAITLVGLITLEDITEELLQAEIT DETDCYITDDAQKKRRTNTSKKSVAELFCSEKKSERLSLHMLEMTEKWLLEKTPLFGE MNPKAFENLIQRNIREVRIYQRYQHNYLFKVLIVPPKNSTSPGTLNLFEAGEMSKRFV LILEGKASIKFNEKDLLFECGPWTCFGEAILNKMELCIKDGKEPPTGFFFVPDYTLTV SGPCRFLQISTSSLLHSLRITQFVKEIRTPKISVTSDDDPGLVSRKVSIMGNSPTEAR KRSSTSVMTNLALPTARLAAKIASVEELKPLIE" CDS join(568018..568022,568076..568168,568219..568407, 571659..571748,571801..571911,573038..575051, 575350..575400,575444..575505,575551..575873, 575923..580148,580226..580354,580967..582312, 582383..582522,582955..583046) /gene="CBG15462" /locus_tag="CBG_15462" /standard_name="CBG15462" /product="Protein CBG15462" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM89" /protein_id="CAP33764.2" /translation="MNLAAKKEESIDADAHVLSTDTTVGEVDSSELPAVLRRQRKAGA VTKGRKKRKKRRKTAVKGGVKKRRKTRKKKTMSGVSKKLKRMTEPELGIRSSTDIVMD SQEGPSAPPSSAAPKPAKVKKAAPKPDLLNSIFNDQEKFLGVTEKDLEAKKAAAAKAN KPSPMNKPPPPPSRKGPPQSGKGPPGHGSRQGQRPPQSYGVFFNNPATAHSYQSKMMQ HQDPHVWPNSDPNTNPNLASNLSSAYQIPTASFDTRPFGPAFVSYSNLPPLIPPPLPP TTLPPPPPPPPPGLPSSDLSAILPPPPPPPPPPLPPAKLSPATLPPPPRPPATLPVQS KKTFTVLDRPGFWNSSKGKSDSPTFPNKNGNDSTVSSKIEESAASTSTTKSHQDKKLQ RTASSVYETARAAQKRSFEDGNPSTLIKRLKQQQILTLETKKPPSLMDLDIPPPQLPP KLPSQQLPPQPQPRPLHPPQPSAATILAQYKTPSRLDWCRREGIKRREFYLVRLRMLC DEPDKLKEYAPADQSSVILRQCTTPCYQQKVLVEIDDGEFIVRLDEFCAFSYSCSFEK TMGHVPSNVKITFFNHGVADHQKVFYEPPHESDTYEEQKRQLEHIRMQKQQRKPQNIQ IYGFNVKLGVKRWGKTAEPESILTRFFASEKGWQAIDMVNWSFTERRRYEQIMLVDNS RLKYEISNPHVTLPYPKLRPCVGSRARGFYRTIFLLNFVNNKILFEEEDQLEEDEEEE YELQTSHSPKYHRQSSYSTEADKRYDYFLETLEVAEPNVNVSHISLPSNPLRTEKQTP LMETLMLHYQTDNEREYWSDITKKKTADRELKRKYNSRLTYEEIWAPIKANTTWKRID YVRCALYTAETFYKKQLKAISHNKANRVYWEISKLADKYRLGATEFEKQLSWGLYYYQ NGFHHKKRKGKCSIIFYNFILSFTEFSVNLDSYPITPCLSREYNDLYISRDENGNLPT PLALERSEGLLEEERIIFGFLPASQKWTSLEIEALRLAENFHNAAEYDTEEYQFLKGR PESNAECIANITRMCRIYLVSYETMPKPGIRTVAYLDKDKDLIHTNTNDQKYYFEGET FAHLIAELEDPGYGDVLTKEEVEELEKKYEKNKGEIQEEYAVDNSKRKELDLDLGIFC WRIANQNELNRKSVEKKTEEQLIDKNHVSSPERKSSEVEVPQKLEEETMESPPTESLM AEVEASETSSVLEEEELEEIESPKMKSATLEQKIMDQTTEEATWAESDVVEQEKVERI INEQRTVEEKLAEQQVAEPETLVPKIVQQEKVEQMVHENSVKEPVDETMAEQQAAEPE TIVPENAEPEIAEQSAVNEDKKDDEMVVEVEDEAVKETVVEPKIVEQKTGEQKLEGTA IVELPTAELTSVKSDTIESKSFEATPAESNVTEQTEAQEVLVAVDIVTKEPLMEMNDV EPEILEQKTDMPQLEENNIVDVPTAELFSFESDTVDLKSFEATPAESIVAEQTETNTI QKEVDAVAKEPQTEANDVEATFVEQKTDGQILEENTIVELPAAEPMSIESESFKASPT ESSVIEQTEAMENQEAGDSVANELQLETNDXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXVELPAAEPIYVKSDTVDLKSFEATTAESMVAKQTDVQEKQMS HEQEPVEEKMAEPQVAEPETIVSQIGETEIVEQCIINKDQEDDEMMVEVEDEAVKETI AEPKIAEQKTDEPQLEKSKSVELSTAEPMSVESDTLEQNSFEATPTESDVNNQSAAKE NEEAMDAVEEEPHDETIDVESTSVEQKADDPKLEEKKIVEVPTKPMSLESDTIESESF EATTVESNVIEQAEAGENQVVEGEDGEMTGTVDEQKIVEQKTDEPQSEENKIVKLPTA EPMSVESDPIEPKICKATLAESTVAEPTEAIPDIEKNDVEATSVELKTDENNPVVNQE EAMIVEPTMEEQRVVKEKPIEPMDLSQGHVENETVASNSEDQEKVGQEKLEQEKEAHM ETDVIEPISVEQKIDEKNPVVNEEEEPRIVEQQVVQKKPIEPTELDQKIMKKQTAASE SKEQEKVGQKKLDQEKDQKRADGKKREEVKESLKSEQFESPNRKLVKGTKKETETDSG STSSVSAAEKKKDNLKEQGISKRKYKLPAAYANYDGRSKHRRSSSSSSSDDSKTDYGE FDESRKFGSSYSNPSTSSSSFSPKDENRRKFKEERKSEGENRRDDHRRKSSKRDEEKS RDEEERRKQSNRDRERRKERSSRTSDRRYEHGYGYGHGNSRGHESERSSRWGSPRKRS PGRRQKSPPRGRPRERAKSMQPTDRKPHVIELSNFQAIGQNGQGGYIVNFQELRNREV QMHKDRMKRAMLEEEKRQERRMRRQQERRCEDRMRRREHHQRRRHSHSNDSQRNSRQE RPPPMSCECPATREQNGERSQSTTPPLNVQMRINPPPEFSQRRQSPNRQFHRNRSPRH NNSRRFNPMNQQRQQFNQRRPQRMRSPQHASSSRDLPSGNNQAVQGEQAQDPDAPKRI APAVQPPRQHYNQGGRGYRQQNGRGRPQNHHGSNRDSVRNIPIRDRIEWHPKNRFRLI KKTSEIIVNPVLEEPVLLLQVFREVILSQGPVDQRSPLKGSEASQAETTEDDKTVFNF VIFSYIRTPHSI" assembly_gap 577731..578730 /estimated_length=1000 /gap_type="between scaffolds" CDS complement(583901..584209) /gene="CBG27980" /locus_tag="CBG_27980" /standard_name="CBG27980" /product="Protein CBG27980" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJS2" /protein_id="CAS00152.1" /translation="MRMLKNYYFQKNNLILFQTSLPTSHQRHSVSNDTAEVQCGSVVH QWREDLPNHQDRQIHMKRLSKLLGRKMTHFVETLSVRNLDVIRGLPWQGPSKWLRFEG " CDS join(591982..592083,593289..593406,593454..593608) /gene="CBG15460" /locus_tag="CBG_15460" /standard_name="CBG15460" /product="Protein CBG15460" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM90" /protein_id="CAP33765.1" /translation="MMHLHRNDLLTIESTSASKPSLLSSFWSINVQVQNNERLEDPKT CSQFSLPEVAAGQGENQSFPNQRPTRSASVTELSIKFETAPSSSELPASFMTDTTKDL PLAKETASCRVADWLTNLDINK" tRNA 592279..592349 /gene="CBG28550" /locus_tag="CBG_28550" /standard_name="CBG28550" /product="RNA transcript CBG28550" /note="C. briggsae predicted tRNA" CDS complement(join(596503..596565,596610..596805, 597124..597131)) /gene="CBG27981" /locus_tag="CBG_27981" /standard_name="CBG27981" /product="Protein CBG27981" /note="Predicted" /db_xref="GOA:B6IJS3" /db_xref="UniProtKB/TrEMBL:B6IJS3" /protein_id="CAS00153.1" /translation="MSRFPLPVISLHHVNRRSIGTFAPHNRRVQPFILAAVFGMISTI ISLYKKKALFKVPVYSLIQVGLNSTMLTYPINSDLIHSKPECPS" CDS complement(join(599887..600198,600251..600253)) /gene="CBG15457" /locus_tag="CBG_15457" /standard_name="CBG15457" /product="Protein CBG15457" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM91" /protein_id="CAP33766.1" /translation="MMFRVLLAFCLFSTAASVTLVICQQYCSSVQGAASYDNCAPWNS YALASNQTCYNLCVHNCAAVYDGSCMTGNKFRCCLKTTPTKTQEFVTSGCNKLYNNLP GM" CDS 601500..601811 /gene="CBG15456" /locus_tag="CBG_15456" /standard_name="CBG15456" /product="Protein CBG15456" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM92" /protein_id="CAP33767.2" /translation="MFRVLLAFCLFSTAASVTLVICQQYCSSVQGAASYDNCAPWNSY ALASNQTCYNLCVHNCAAVYDGSCMTGNGFRCCLKTTPTKTQEFVTSGCNKLYNNLPG M" CDS 608579..608782 /gene="CBG27982" /locus_tag="CBG_27982" /standard_name="CBG27982" /product="Protein CBG27982" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJS4" /protein_id="CAS00154.1" /translation="MKSGQNHNSQNDSFRTSNCQHAEKQKSYMDPEYTNCLVEKIEQE EKCSTANVKKSRQISKFVNDFAR" CDS join(611554..611712,611764..611934,611983..612195) /gene="CBG15452" /locus_tag="CBG_15452" /standard_name="CBG15452" /product="Protein CBG15452" /note="Predicted" /db_xref="GOA:A8XM93" /db_xref="UniProtKB/TrEMBL:A8XM93" /protein_id="CAP33768.2" /translation="MLYDGFNLVSTVIFAIILSVGGAIGMIIPSKVEREFIIEFGFLD TAPDVGFMTIINRFFNSFLIGSITCYTSLYLFLRKQNKLALRRSRRLREGENRIFALL LITTFLYLALFTVFEYITFQDWNNGSGSLLGKWLKRLAIANYLPEISLPVFFIVDNLD FTKKCRRFLGTPTDVQRMST" CDS complement(join(614796..614822,620380..620820, 623836..623919)) /gene="CBG15451" /locus_tag="CBG_15451" /standard_name="CBG15451" /product="Protein CBG15451" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM94" /protein_id="CAP33769.1" /translation="MSKRRSKSCEAEPIGTKLKLKREDDDELKFGTIDKELEKHTEKM NHLENQISELNAKIEDMKKSGMTGLNVNGGENTSSPGGSVVSAKEKERKRSIIVTGIP EYGRSEREAWYWDQSCMSKILNYLEIGAPPVSFYRLGKNAERSRMMKVVFATSFDQKA VLARAPRLKYFPSGQIETKSLLE" assembly_gap 619796..619893 /estimated_length=98 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 620852..621008 /estimated_length=157 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 623367..623411 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(632002..632082,632126..632234, 632283..632365,632408..632510,632559..632692)) /gene="CBG15449" /locus_tag="CBG_15449" /standard_name="CBG15449" /product="Protein CBG15449" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XM95" /protein_id="CAP33770.2" /translation="MHLSVVLFIFIAGIIAPVVPSRFFIRGTVSCQNGPPWCYTIQLL DAFNDVIASVSACELTNPNQKFRIESWQPWDGPFDWHFELELLIKHVCGLEITEEKQS MRPKPYFDKKVEIDFSKNTTKIIVIWESTFWSDLYQIRIYSICQRTLANCLMLRLTDH YQFRSKVKK" CDS join(633681..634094,634366..634578) /gene="CBG15448" /locus_tag="CBG_15448" /standard_name="CBG15448" /product="Protein CBG15448" /note="Predicted" /db_xref="GOA:A8XM96" /db_xref="UniProtKB/TrEMBL:A8XM96" /protein_id="CAP33771.2" /translation="MKLQGPFFIMLLIQSVAILFRVVFWIISFYLAVFFHDITPKVSW LEPLMKLCLYVDYCSNLFSVTFNFVLSLNRFLTFMSKNWTSILYDGFNLFFTVIFAVI LSVGGAVGMIIPSKVERKFIIEFGFLDIAPEIGFMTALFAVFEIITIKNWNAGNGYLL GTWLKILSVANYLPEISLPIFFIVDNLDFTQKCRRYLGTPTNVQRMST" CDS complement(join(636319..636495,636640..636750, 637166..637271,637316..637545,637594..637730, 637787..637904,638601..638703,638749..638910, 638957..639030,639063..639193,639241..639378, 639817..639879,639928..640099,640151..640295, 640346..640506,640719..640817,640879..641034)) /gene="Cbr-tag-130" /locus_tag="CBG_15447" /standard_name="CBG15447" /product="Protein CBR-TAG-130" /note="C. briggsae CBR-TAG-130 protein ;" /note="Predicted" /db_xref="GOA:A8XM97" /db_xref="InterPro:IPR025958" /db_xref="UniProtKB/TrEMBL:A8XM97" /protein_id="CAP33772.2" /translation="MKALQAIFILIFSELISTQKPEVIPAKWDVLYEKETEKNMSLTI FRFNVEKQYSVARIIMSCNESTEHNPLLAVFREKVAILSLQVPLIVDNYEYSQVARTL CPFTEYKEGEAFTVEVTSSRPVHYNFRAELVHNFYLYNDSKRLVTASASEPVYLRYDI PNGVDSVAVHVLSNTTTCMTVSVQKIGCPVFDLPDNVNSMGLHQTMTTSATIPVEKSR MSSFYVIFVVNTNDDLCSEILSIKPNRPTKFPLRLKSFNVTIESSMKIFDYIIPIVFW ACILLLVTLVVFVYHYFDGIWERRFLSRAYTHLEDNAQDERLRDFYEFKRMSEDDDLR DYDILTDCKDMMVVRAKVCCSTTLTVADLSMTPYETREMQYDVYKIALAIIGIFYNIT VLQLIISKAGNLRQSGDLDECTFNFQCARPLWYFVAFNNVVSNCGYVYFGSLIIVMNY CRERSFRRLFAVQPTLAERYGLPQHSGLMTAIGLAVIMEGISSATYHVCPNNINYQFD TALMYVIGMLGKLKIWSLRHPDMVVSAYHAFGFLGIFLMAAIAGVYVHNMIFWIMFSI IYIGSMMLISLEFYFKGIWTLNIRELRNSIRMSWATSRHLSCIVPAYKARFFVILLLN MANTAVVVYGLDAHPKDFLSFLLIPFIGNLFIYIIYYILMKMIYREKIPKRAVALLIA AVISWTCAGILFNQRVSDWSKMPAISRELNKPCIFLNFYDNHDIWHLSSAFAIFFSFT AINVIDDDLMFVMRNTIRVF" CDS complement(join(643323..643475,643529..643670, 643725..643996,644049..644198)) /gene="Cbr-unc-27" /locus_tag="CBG_15446" /standard_name="CBG15446" /product="Protein CBR-UNC-27" /note="C. briggsae CBR-UNC-27 protein; contains similarity to Pfam domain PF00992 Troponin contains similarity to Interpro domain IPR001978 (Troponin)" /note="Predicted" /db_xref="GOA:A8XM98" /db_xref="InterPro:IPR001978" /db_xref="InterPro:IPR038077" /db_xref="UniProtKB/TrEMBL:A8XM98" /protein_id="CAP33773.2" /translation="MSEEAGEDAQRKAAEREAKKAEVRKRLEEAGNKKKSKKGFLTPE RKKKLRKLLMVKAAEDLKRQQLLKEQERQKALADRTIPLPNVDSIEDKGQLEKIYNDL WARLTQLEEEKYDINYVVSQTESEINTLTIEVNDLRGKFVKPSLKKVSKYDNKFKKSA DSKAGGKEDFRANLKIVKKDVMESITNVKKKDDKPDWSKKNKEAKVEEAAPAAAAPEP EPTAEEPEAADPEAGWSKIA" CDS complement(join(647009..647129,648104..648202, 648247..648315,648363..648550,648603..648712, 648761..648873,648963..649031,649079..649180, 649226..649401,649447..649564,650564..650635, 651016..651145,651186..651406,652404..652565, 653074..653219)) /gene="CBG15445" /locus_tag="CBG_15445" /standard_name="CBG15445" /product="Protein CBG15445" /note="contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10328 (Serpentine type 7TM GPCR chemoreceptor Srx) contains similarity to Interpro domains IPR019430 (7TM GPCR, serpentine receptor class x (Srx)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8XM99" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8XM99" /protein_id="CAP33774.2" /translation="MSSSNSTNRVSFVDVIIFAGLESLGMCAIVGNLALIIVLLNNKY LHRASFILMLNLAIADVIHGFVTTCHFYPPILLKQMHIGEMAVRLFNIADWTAWAITL THMSAICLDRLIAIILYGRYNVLVTVQRIKTFSISCWAFFLSTNVTLFFLQACCMIRP LESLNYYSFGYAENSGENFNVYVLTYTPVEILTILILSFSNPITLVQLYRRHKRKIAL RQQGTTKSVSTSSSSLLKQQRSQWQRASTMLLEMSMKMGSKHIANDVREMAARRSNRQ QQRILLQITVVALIFYAYMTAYYVSYYSRFQSIAVMIFNSYFYSITHMINPVIYFSLN KEMRSQLKEAFVDFRKFFSCKKKDPYGFANSSTKINHSTKLTMVRAQSTSCSETSPLF SSNNHYKSTGTTQKNEERLLDSVEGSSTGNESAEIRAIVQNDDPSDQCSLPKSDIYVT PPVEMPNKMGAKERSTFINQLVSALQYASNKSLSSVKGQNEVNEGEEYGEDERAAENG EQLRVQPVLRKLDKSATTNDISSMIKQRYIRFSNTLQVISRDSNFLSENHKYVSMGSL ERSCLLNDMSGNSDSTSTTVQKSITRSTSSNSNVFRSSTTNCNGDTGLLLDDEIDTDV EEEIAYL" CDS complement(join(664675..664863,665379..665491, 665538..665628,666504..666638,666680..666745)) /gene="CBG15443" /locus_tag="CBG_15443" /standard_name="CBG15443" /product="Protein CBG15443" /note="contains similarity to Pfam domain PF07679 Immunoglobulin I-set domain contains similarity to Interpro domain IPR013098 (Immunoglobulin I-set)" /note="Predicted" /db_xref="GOA:A8XMA1" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR036179" /db_xref="UniProtKB/TrEMBL:A8XMA1" /protein_id="CAP33776.1" /translation="MAPPSIYGEPKIRSENGSVFLEVVVTGADVSKIQWFFGADELEE NEFLKFSNSDEGGNRTLFVAEIKDFDKPLAGEYKAVFANADGENSAAFTVTAGNAPDF HDKPHIVQRDNGNVIVIKVRAKSHLEMKAEWFKDDKPVKFTDRVKAVVKKDDKDKDGF QFLLEITGPIKEDEAKYKCIVKNSEGQNQQSLNLVFD" CDS join(670707..670830,670875..671121,671184..671314, 671360..671524,672026..672090,672137..672260, 672311..672688,672737..672858,672902..672993, 673047..673281,673325..673446,673489..673598, 673643..673851) /gene="CBG15442" /locus_tag="CBG_15442" /standard_name="CBG15442" /product="Protein CBG15442" /note="Predicted" /db_xref="InterPro:IPR035914" /db_xref="UniProtKB/TrEMBL:A8XMA2" /protein_id="CAP33777.2" /translation="MDHGLVPKILRVPGNAIVTMVSVEPNDMFPHSGISGKIIKYDLN RISFFDCKDQIDLSSGETYYFVSQNYPLSPTSEISQCVIKFLTSGNRQGVRFAVYDFY LNQLQHDSFFILGKNGHNISIEGFATEDEPVAYYFENEADVTFSISHQDHSFTQKRFY ILVNSYELLPNNQCDNTGKIDIALGQTITFGTRQFGSNAYENNLNCGFDYTRTATSNS LFALAIEYETEKCCDTMSIDGLTDDQQIYQGFQYSSLYFTKSEQLSFLFSSDPLVGGT GFKASLEHIDCTCSAGLVLVKNNVLTSPGYSNSISYCPDLFCTPKIDFQDDLYDLQMV FTDVNLRSYSLNNDTDSLTVFDAYDHTVVQMAPSYFGFMTFWATVSPVRVQFVSKVLT AFPLNMIGRGYSMNLNLVKKHIVSEKITFTDTNFFKDISKLDLSSNDTFEFVVTGRAE TQIFVYFFTKTTNQVFIDIFDGDSMDAARIDNKALYSNVLENGPSMTLSTSSNKAVIH IRGNPAFVGTNTDFQAMITDLKPEESCGPLVYSMRNAKEQYKHIPLQGTNCYKILHFA DSSYTPSAFMSVKFSDNLPLNLFYGLTTSTDYLLAKYSHDPRPEDLFTNYMVLQYSSS IAATVEFFWDTSSICGLIARTMQPSQTVMLVSDDYGKSNTSQTIQQFSVQLVTFSSKI LPTFHFQKFSILSGRRIKCSNWADV" CDS join(678724..678806,678855..678993,679518..679777, 679825..680230,680276..680978,681029..681141) /gene="Cbr-asns-2" /locus_tag="CBG_15441" /standard_name="CBG15441" /product="Protein CBR-ASNS-2" /note="C. briggsae CBR-ASNS-2 protein; contains similarity to Pfam domain PF00733 Asparagine synthase contains similarity to Interpro domains IPR001962 (Asparagine synthase), IPR006426 (Asparagine synthase, glutamine-hydrolyzing)" /note="Predicted" /db_xref="GOA:A8XMA3" /db_xref="InterPro:IPR001962" /db_xref="InterPro:IPR006426" /db_xref="InterPro:IPR014729" /db_xref="InterPro:IPR017932" /db_xref="InterPro:IPR029055" /db_xref="InterPro:IPR033738" /db_xref="UniProtKB/TrEMBL:A8XMA3" /protein_id="CAP33778.1" /translation="MCGVFAICQQTCQKGQKVDIDEARKLSRRQHHRGPDFNGFYQDK KTGDILVHERLAIMDLGCVQPIQGTRPTRQVIHNGEIYNHQALRDTELKQFKLKTTCD SEVIIFLYERYRDGHICNMLDGVFAFALCYDGDFLAARDPVGVKQFYYGIDANGRYFF SNEMKCLEDSCGDIKIESFPPGHYYTPKTGFVRYFNPQWFDYRNAIQALDLKLLQKTM IAAVHKRLMSDAPIGVLLSGGLDSSLVSSIASREMKRRGMTVHSFSIGVDHNSPDVVA ARKVAKFIGTTHHEFYFSIQEGIKNLRKLIWHLESYDVTSIRASTPMYFLSEEIRKKG IKVVLSGEGADEIFGGYLYFHNAPSDEEFQKETIDRVLHLYTSDCLRADKSSMAHSVE VRVPFLDKAFMEAAITLDPAFKRPQKLEDGRNCEKFVLRSAFNTDQYPYLPDEILWRQ KEQFSDGVGYNWIDSLMQHCASKITDKEFAQASKLFPHNTPHSKEAFYMRKIFHELFP SDQAALTVRKWIPKWQKNQDPSGRASLVHESSYHNLGEDNCNGKSAITQQRIEQCRPQ A" assembly_gap 685634..686634 /estimated_length=1001 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(688526..689326,689407..689520,689566..689721, 690459..690479) /gene="CBG27983" /locus_tag="CBG_27983" /standard_name="CBG27983" /product="Protein CBG27983" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJS5" /protein_id="CAS00155.1" /translation="MISTTPQMDLSNLSLFNQSTSIFSALNEPNQTIDSDLKDLVLRY ISCLVNGTPTSASRSTPLSTSIVESQSLPPPAPLDIKNPLMELFKLTSDPQFIKPLPF PRIPRDSPSPEPPQYETIEMTTEPDDTWMPRPKKPIFKKPEASAAPRHRRRKRRIEAQ KRSQLGDEENSSDCIVVYDAEAERRYVASMLPVSNLSPSSLIADKDAPVAPTAPAISS AAASVPASSSSAANTPTTSTPTEPEPVTLNKRRHTEILSSFENWKIKHCLTDYPIIHR NAILEMRMAKMRKESTDQIIKDLQRYKILMRTVKISHETTTALLMATVSLQADLDAKE KEYDPEVFYNYMKSMSEKRMIMPVSINQK" CDS complement(join(692151..692160,692236..692472, 693642..693911,694455..694708)) /gene="CBG27984" /locus_tag="CBG_27984" /standard_name="CBG27984" /product="Protein CBG27984" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJS6" /protein_id="CAS00156.1" /translation="MCKKQPEGNQQGEEKHWMQVIPGPNLDGTWSCIGEFVRPENPND IGQYIEFLSPGPDEFHFPSPEAFLKACREGKVKGHGPDGNSIPNSERHFEHREGTQSK EEKHWMQVIPGPNLDGTWSCIGEFVRPENPNDIGQYIEFLSPGPDEFHFPSPEAFLKA CREGKVKGHGPGGKTLDPVRPQISRNSMFESDEEEERLPSHRVSKLRMKKRRNNGECG PKRNYRRKDQDDKDRDENSQNYQHSYCTGSAVRRMINT" CDS join(698006..698091,698809..699342,699456..700061, 700521..701299,701350..701557,701643..701929, 701978..702459) /gene="CBG15437" /locus_tag="CBG_15437" /standard_name="CBG15437" /product="Protein CBG15437" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XMA4" /protein_id="CAP33779.1" /translation="MNNRPKRACAVSNTNGKPPENATGANTAGRRQGSTKEAIDAGAS RSNVEAALLANKNTVVAATAKNVAPNLSKTETDHEATSSKDASEHKVTKTPSRTMPAR LCKSTFAEKMSGARDECASNTKDSSSSSKNTDSFGPKNAALPADGGTTSGDPLPKMSV LQPKIPKIEKSKEAAKKDSSKKKTPWKLLINWHNVFPDLDAEDFLPRSSTKPTGPTSS SVKAAVENDKKRATSSAALPSTSQKAASEGDGILSRQSTLDATKASTEAPQLVQEESS LNGKNEQMDSTSTCGTSENQGNVYTEEWRKLFPILTSQTPQRKHFSIGIGSASSSVSL KPKIPTKLPNFLIATPDFAGPSSSSLPALATPAQYTPKLLSTSNSVKQRKQRTPRNIF TLPIFDEDREDELLIARSSTRPTRYTGNFVNTAAVENDEKDEKMDEDDAASENEDDSE SEETYKKPSISEQREAIIEKFRRSEKRKSIVQMKKEMKYADKISREFERSEKRRKTEQ KKREDKKWREQQKELKEQERSDNALANLEIRKIAHRKAQDKKFIIGRQKSMKEVIKML KERTIATDVQVRVPSKKFEEPNNFSISHLVPIQRFSRSGTKSEYFKQLENHYRTSPNF KAIHAFATEATKLSEKHYFGSISDPFFKAREFRCKWVDARYIGVGKQPDFGLDISYAD KMPSDWKQEIQKKLPQRFYELGAKENIPKLVEAIGSKQYKLLDLTPEFSRLDSAKKMA KVEYIVDKFLLLLKIWKIKHTDTQYPRVVLYFFFVMESVMKTVPLQSREAVIFDFVGG SNDAKYELVKNMIFWLPVHLGDLAGTCHVPQPEMIDLSRQMLAVLLNEWPVAMGMRLE DQDLLERIQLAALRLECHNSMEKDEIREWLPFFKPKNREGAEGVYSDVKEKRQNSLRR VWASRKTTVEFGRLETSHPVRPTRRRCHSFSEFKDSEKFPKKTERINLDPIEHWNMLW SSQFEGLRRIKYSVEGSDVPE" CDS join(707692..707755,707853..707996,708713..708732) /gene="CBG15436" /locus_tag="CBG_15436" /standard_name="CBG15436" /product="Protein CBG15436" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XMA5" /protein_id="CAP33780.1" /translation="MGACTSCMRLLLDAEADVKIHVIEPTSINNGEGASVATRDAAPQ SPAPPPLATLQVPGQLRPRTPEPTDPRVANL" CDS complement(join(709265..709408,709962..710069, 710121..710220,710274..710440,710489..710611, 710664..710818,711300..711519,711694..711807, 711892..711980,714085..714210,714265..714358)) /gene="CBG15435" /locus_tag="CBG_15435" /standard_name="CBG15435" /product="Protein CBG15435" /note="contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10328 (Serpentine type 7TM GPCR chemoreceptor Srx) contains similarity to Interpro domains IPR019430 (7TM GPCR, serpentine receptor class x (Srx)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8XMA6" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="InterPro:IPR019430" /db_xref="UniProtKB/TrEMBL:A8XMA6" /protein_id="CAP33781.2" /translation="MESATRHRADMISFFTFDSYISIVGVAYTAVGLLGVFCNVTTVV MILTNRVFRLSAYTIMANVALADSIVMLIAGVACGMDVMWPNPNDLTSFIPSLEEPLN TVSPIPLRNDTKMTGDSSETGNIHAVLSFSFVAAWTAGVISYAMLGMNRCIAICYYGT KARALNQVSVAIACSASTWVIGVGAALVGTLSQPMIGIQRTMWSISFLEPKPHTTLFF TILCAANLFGLGAQWVCSTLVLLKIRQVKKKISKNKLNQNSANRFRKQARLTFQFFYP SILCTISTFLFFIKPYAFEYLSGWQLVILHLLWLCNHTCNPFIYAYFNDRMRMTYKEI LTCAAIRYQIRKRRSSHPFRMHGRHNVSKRSNAAGMKSTRISARSGRTNRDGNFVRNS LQMQSRDFEQLCEFIMRVNPLYDSSEGWRESSDDEPFQPEFTKELESVHNAGGSSRYD NDREAKSIVLDLGRQTVEHWVKFAKKASI" tRNA 712324..712395 /gene="CBG29021" /locus_tag="CBG_29021" /standard_name="CBG29021" /product="RNA transcript CBG29021" /note="C. briggsae predicted tRNA" tRNA 712850..712921 /gene="CBG28782" /locus_tag="CBG_28782" /standard_name="CBG28782" /product="RNA transcript CBG28782" /note="C. briggsae predicted tRNA" tRNA 713571..713642 /gene="CBG28978" /locus_tag="CBG_28978" /standard_name="CBG28978" /product="RNA transcript CBG28978" /note="C. briggsae predicted tRNA" tRNA 713930..714001 /gene="CBG28571" /locus_tag="CBG_28571" /standard_name="CBG28571" /product="RNA transcript CBG28571" /note="C. briggsae predicted tRNA" CDS join(723520..723525,726817..727260) /gene="CBG15433" /locus_tag="CBG_15433" /standard_name="CBG15433" /product="Protein CBG15433" /note="contains similarity to Pfam domain PF00856 SET domain contains similarity to Interpro domain IPR001214 (SET domain)" /note="Predicted" /db_xref="InterPro:IPR001214" /db_xref="UniProtKB/TrEMBL:A8XMA7" /protein_id="CAP33782.1" /translation="MLLLYSICILKCDQECKCPDDSCPNVCNRKEYSESCFTNKRFSY RNQKFRNYGIRIIKQTGPTAVEPSPCDHITEEEKIRRSETCKSKMMPTFLDSGNHAID ATLSGNQAKFVNHSCDPNSAEEWKLHGMAKFRNSLDSSSISLMSQCL" CDS complement(join(732742..732882,732936..733283)) /gene="CBG15431" /locus_tag="CBG_15431" /standard_name="CBG15431" /product="Protein CBG15431" /note="Predicted" /db_xref="InterPro:IPR035291" /db_xref="UniProtKB/TrEMBL:A8XMA8" /protein_id="CAP33783.1" /translation="MFSRTAVLLSCLAIASSGFSVRSSAKNTVQDAHEQLTKLIRCWE PIEENVAGNHFSGEHRLSEPIYELCSYMPDPKDFNKGYVNGVDMDSDDYTNVLSFFHI THPRLAMLNVCLQEGFQFHAAGRPSQTSIRCLCKRDGCNLPKGFTTFLDFNKLPMPET AF" assembly_gap 744568..745141 /estimated_length=574 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(747414..747769,747816..747929, 747976..748110,748167..748256,748303..748399, 749112..749276,749360..749524)) /gene="Cbr-stg-2" /locus_tag="CBG_15427" /standard_name="CBG15427" /product="Protein CBR-STG-2" /note="C. briggsae CBR-STG-2 protein ;" /note="Predicted" /db_xref="GOA:A8XMA9" /db_xref="UniProtKB/TrEMBL:A8XMA9" /protein_id="CAP33784.2" /translation="MALGTIVEEHFHHPPLPSSSPLSCKKATTAPEAPPVILLPQIRT NEMTLGERVSKFVIEARCTDNILFSGAMAVGGFVLVMQSFPIFMNNWVFLTEPRGINK TNENGEQLESTFHYNTGYFQICRVHINNNSGIIYDEMEIPPSESEYKCYLNPLLSQVD LTDISLASLAVIIRLGSPALLHVTGALVCCFAFFLGVVGHIRSSFYTLFSSITYICGS IILCIAVLMVVCVVDDELAPRMKPNAAGEPSKFSYTYGPPFFSSALSFIPVQICACLH AFLYFRRYPSVVEKLKFVPGLEAKREFLCQNGKKPRISVRRAQLDKELGIPPLESFRR GSLASYLPIPSFSQGSRRNSRRSSQASFSNPSLLFMQDV" CDS join(758989..759123,759957..760037) /gene="CBG27985" /locus_tag="CBG_27985" /standard_name="CBG27985" /product="Protein CBG27985" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJS7" /protein_id="CAS00157.1" /translation="MTTLSSSQEVLALEKVTNREYTLGHLHYLLPKPFGLMLTDGRDE EISGWLSTTRLVGSMINDRLLSSSPGD" CDS join(<764433..764505,764551..764737,765135..765303, 766446..766575,766623..767188,767239..767409, 767456..767660,767711..768047,768098..768320, 768377..768514,769203..769424,769430..769501, 769507..769547,772192..772216,772218..772434, 772562..772689,772824..773111,773414..773565, 774091..774259) /codon_start=1 /gene="Cbr-rig-1" /locus_tag="CBG_15423" /standard_name="CBG15423" /product="Protein CBR-RIG-1" /note="C. briggsae CBR-RIG-1 protein; contains similarity to Pfam domains PF07686 (Immunoglobulin V-set domain) , PF00041 (Fibronectin type III domain) , PF07679 (Immunoglobulin I-set domain) contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR003961 (Fibronectin, type III), IPR013098 (Immunoglobulin I-set), IPR013106 (Immunoglobulin V-set), IPR003599 (Immunoglobulin subtype)" /note="Predicted" /db_xref="GOA:A8XMB0" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR036116" /db_xref="InterPro:IPR036179" /db_xref="UniProtKB/TrEMBL:A8XMB0" /protein_id="CAP33785.1" /translation="RFDTMILLFFICFLVRTGITELESQLFDLPSLYVKTDQLYLHKR NTTNLTCELSSGYSEARMKSVIWLKDNEVISLNDTDYVWQGFILIIVGSTPQNEGEYQ CIAEMTKIRLSNRQLITTTIISSPLRIRRARFTKFDENVNNTAITVRENDIIRLPCAG MPDVIPAPAQLCFRRLENEDECLGGRNDTKYFVTETGMQISLVTPSDAGFYHCFVTNE YLNQTKMSPKPLLLIVSEANRTEKAKAEALKPRLVYPTRETTIDKPIKLTVAEGEDIL LECVMNMAKVVWIKHNDTTPNVTMEDNMSRFQQIWGNLKIRSIAAGDAGIYTCLGLPI VGGDGIIDNNSTRPRIDYSLNVVSPSGVRLSISSLYDKRYLLECLATNMRYEIPTAYI NGTSIIHNINELGIPSNTNFYNNPIRVHMEVKRSFTGSIQCVSRPAMVEAEIYGYGLE TGKSMNMYVMNTLNSNDLIIKGPNNITVLIGNVADFPCIVQRVKARSWMKNNRTLSLF TARRTILGSNSLRIKKVELDDEGMYTCVAQSESGITSYSSAYLTVIDNSTTPAPVVTS TEPFADKKKDMRIDVEDVRGFVTGTEVRIQWSVLGKMEALTKIAKFIIEVQTFGASEE SWIEADSVDSHVRATTIKSLISDNKYKFRIKMVRDDGSHVLSLPTDWMTVEATSGDVL PLAPKIITVYQHSTSSAKVLFSHNVPIENAAAKTFVIVYNEVSSAQNKSQVIQVDGDQ NDAIITGLNFDTEYSIRAIAENAAGKSVHSAEYLFNTTRKSSFLELVAPETFALIFVF ICFFVLVESFPSRKISDCYQMCGVGRKRRYKRMGSVRVSRVQTKSQTAINCKITFLRL HCFNYSLNNISDNGMLASVRIFLGTIEPHLTFKNIALGGIVTFLALIIVLVCFFVFCN LRSGKGKQKSQANGKFLDASYRIFNEQKVHKSRMFDDNAEILEADVDECSPLKVRQVD ERHSGDSDKYGFHNHDENLPNLYGNMDDIMDMEEHAEIPNDPTYVSAAKINGDYGVHS TARCYSPESRTSHEMLVSYSRSAPHSTTNGSSPQMNGSMQRVKAYNYADSLLYSPAGT TSSIAETNSSGHGGHRGHCDSPNTAPASDESDQGIRCGGSSRNSHISSTDGTKIMTMG TFKGSTPTSSFVSTFDRRRSENVA" CDS join(778135..778185,778235..778330,778378..778551, 778917..779035,779089..779296) /gene="CBG15422" /locus_tag="CBG_15422" /standard_name="CBG15422" /product="Protein CBG15422" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XMB1" /protein_id="CAP33786.2" /translation="MPAEQTFHIPSDFSRIPIEFVALQDTGAVLTHSRKGFVAVGERK TEVPVVDFVDSPEVGVLENTFTMQWQAIGNTTQVHFTGTGGSLAGGEGNPGVLIIDDE MIKVNLLQKRIDGSFYLEANEDFLMIVAKSKANGSPDVETLQASQFPASGVKLPIGYW HSVPFPIPGAGKLHLVELVAKTDKNAVINVAETTGAPLRIPIKTVVDDDEQNDSA" CDS join(779781..779849,779955..780041,780097..780322, 780365..780469,781449..781581,781628..781797, 781841..781972,782016..782186,782235..782398, 782439..782606,782657..782779,782827..782973) /gene="CBG15421" /locus_tag="CBG_15421" /standard_name="CBG15421" /product="Protein CBG15421" /note="Predicted" /db_xref="InterPro:IPR023247" /db_xref="UniProtKB/TrEMBL:A8XMB2" /protein_id="CAP33787.2" /translation="MEELVKMINKLRVEFDKEQQVQKCKHRPHYVLDPDNNLSLEETH KYFEYIMKALRNLSIDAIDKIDKKWLESAARNREIFADAKGKILKRWTELIFEKWGSE NNKNEIVYQLENLTLSFWRASAERKGKIIFFPEIHIEVVPFLQSLRVVQNYERHTNEL HEEFLYQYVEPDEEVEPYDEQVPDIFVENKKVAKKKLKKKTAKKGLTNTIEMALKTGD KKKKKQAHLSQRTLLSRSPSLKRGEHIRFNLYSDVTPIFKKSASKERATDGTEHKIDF GTEAFLGPIYHISSFESERKSQKYGSWSITLDVGLEERKLNGESILVSLKVPVEEVFL GSNEPVVAFRDESSDDWKKGVFTTHSQFDQNTFIVTTRLSKMGYVSLFQHNDFHYPYK SWKISFEKEKIYFKLHTNVVELAFVVEDSYFYLDTLTGDEFSKLRNLHQRKMSLSELV MKLEKHGVHIIPNKDIIKKHRDTKKDLDLEIFTYRLICLNQINCESCRMNATVSVETV VLTVDGAPRNITTKSPGKYVVNFGEAGKKSKLHESIVTPATLFQFLMVTRPLIVTK" assembly_gap 781030..781184 /estimated_length=155 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(783270..783348,783392..783539,783631..783759, 784007..784095,784153..784240,784865..784940, 784987..786023,786069..786198,786245..786473, 786544..786626,787106..787271,787294..787420, 787431..787565,787612..787726) /gene="CBG15420" /locus_tag="CBG_15420" /standard_name="CBG15420" /product="Protein CBG15420" /note="contains similarity to Pfam domain PF00092 von Willebrand factor type A domain contains similarity to Interpro domain IPR002035 (von Willebrand factor, type A)" /note="Predicted" /db_xref="InterPro:IPR002035" /db_xref="InterPro:IPR036465" /db_xref="UniProtKB/TrEMBL:A8XMB3" /protein_id="CAP33788.2" /translation="MFSRGFCLFLFATFWRLVIALEQQKDGVCPPVLDIIILFDTSGG NDTVFEQQKNWTIKIVRDLPVHEDAVRVGIVQYSERNDIITHLETLKFMPGEDTRTGV ALSKADDEIFDYDGGARLKATRLIIVFTDGLSMDKPTLAAKALRRKGVKIYTISVNSI GFVPEMLGIVGDADNVFGPTDENRIEERLLGEVESSRSCEIQPRKNEKTTSSFGWRIT DAAAIVSPVTEAAVVVSDSTSESTSESISTTIASLNASFKSNESNNSVENIGHNETST TDSSLSNVISTILPTSHTWKEPVQLFTAETESTHENKVLNLTNLKTSLSEESNTSEAK DKTGIDHESTSTETVATENSTDSVERSSVPATTETKTETPRTPTENTGASTTVSTTLP PGTTICINPPTSTPSSSSSAHFSTKSFLVKLGVKKEKKEKDPLSKFLGRDVPNGNSVK EELDLVKSKLDNSSVEKDSENSSETIETKTPTSALPTSKFLFSTKVTFRPMSTSTTTT STTSDSTTAKSTTTSPTTTTITTTPVTNSKKSIKTEATTENTTTTTTQSPSFTPLAKS SLSLQTFSEVTAFPTLLSMEKAVSRVVTLPINNAVTALGVSKPIKKKIRRIIKRRRNI LSSSKAKKVTKKVLEIKRVPTPTTPPIRSTLRPLIIEEKEEEIFSASVQCPMDILFVV DSSGSIARTYDTQKDYLTQLIKKVEPSRSHRVGLIQFAGPHIQKMEWSFDTHSKNSQL LSAIRSVRHLTDFASSNFSCPGTTYIGAALELSLILLDSRRKHTETTVILISDGSTEE DFIILKSFRFSQDDSTQQAKLLRQLPNVKMYAISLNKLTNTKYLTDIVGDRKNLFIND ESQWFEEFFTKKLRCVPTTR" CDS join(798102..798319,798654..798756,799226..799447, 799954..800195,800703..800825,800873..800957, 801384..801509) /gene="Cbr-frpr-8" /locus_tag="CBG_15419" /standard_name="CBG15419" /product="Protein CBR-FRPR-8" /note="C. briggsae CBR-FRPR-8 protein; contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10328 (Serpentine type 7TM GPCR chemoreceptor Srx) , PF10324 (Serpentine type 7TM GPCR chemoreceptor Srw) contains similarity to Interpro domains IPR019427 (7TM GPCR, serpentine receptor class w (Srw)), IPR019430 (7TM GPCR, serpentine receptor class x (Srx)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8XMB4" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8XMB4" /protein_id="CAP33789.2" /translation="MALNSTIVSLLSNTTLMDRTDLPGLSTCTYPTSFAEVDYISTYI YLLAIPFICVLGACAAVMCIVVFTRKQMRSSLNVYLAGLSVFDLILLFFSALTFSPLQ GCVLQGHGDTAVCHFFWRTTPWTLPISNIAQCGSVWTCVAVTVDRFLAVNYPLHSKIW CTPRRAASILLAITVFSVSFKAPMFFELTNDECGRLRTSSLRDNKYYKEYYVTFGYLI ALLLIPWAVMIVLNVFVVKAVHKAYKIRRSMQGGKNNQEEKDRSASNIVIYSLFGARF RQMCVLMLCGRNSRWMEWLKVGRYPPQSIVSDWDGRDGTTRKTSLDASTALLSARSSR RWSKRSQSGAPHQAAAARKDTVIYTSAQNRLSLQSTPS" CDS join(802621..802673,802789..803077,803124..803280, 803325..803557,803816..803907,803957..804107, 804635..804771,804818..804896) /gene="Cbr-jbts-14" /locus_tag="CBG_15417" /standard_name="CBG15417" /product="Protein CBR-JBTS-14" /note="C. briggsae CBR-JBTS-14 protein ;" /note="Predicted" /db_xref="GOA:A8XMB5" /db_xref="InterPro:IPR029409" /db_xref="UniProtKB/TrEMBL:A8XMB5" /protein_id="CAP33790.1" /translation="MSAPPRRPVPIPSNNLFREDSSSSSDSEIIIPQNNEVDIVKAGS DSDVDEPFDRPVPRLVSEESTPVEIIQTEDDRWGEEPPNRHLRNRRVSYGKIPVPPQT MTAEDIQEAAKKSREEQGNVAQEVRRPVDPRRSSVSLDVFKSFRDPHDRKNMPAKDKT IYVEGANGSFREMKKGLFWDTKEPVKSKREEKKEEDSIIPHILKAPGQAFRAQRAYNQ VANIVQGFLAGVTVMLSIFSFNLDAYVLLSGYRYLSLPIHAAFMCAFTISFVSAIDRT GIYEVEHFTSKSRLYATVYNNGLFTFVVWFVGLISTLLCIQLESQLAFAPTKIPSDAL VRRWRIYSVFRAVTAALGFLILAFKPDSDTMAKELRKAISDQMELVTHDPDRKNIILT AMKI" CDS join(807110..807277,807323..807440,808418..809287, 809334..809590) /gene="CBG15416" /locus_tag="CBG_15416" /standard_name="CBG15416" /product="Protein CBG15416" /note="contains similarity to Pfam domain PF00850 Histone deacetylase domain contains similarity to Interpro domains IPR000286 (Histone deacetylase superfamily), IPR003084 (Histone deacetylase), IPR023801 (Histone deacetylase domain)" /note="Predicted" /db_xref="GOA:A8XMB6" /db_xref="InterPro:IPR000286" /db_xref="InterPro:IPR003084" /db_xref="InterPro:IPR023696" /db_xref="InterPro:IPR023801" /db_xref="InterPro:IPR037138" /db_xref="UniProtKB/TrEMBL:A8XMB6" /protein_id="CAP33791.1" /translation="MSYNVREHSSKKIAYYYDSNIGNFHFGPEHPMKPNRIRLAHQLV TAYGLYRHMDIFRPFPATRKDMQEFHPEDYTYFLSVAEPQRVEWLAKDMKKYNIGEDC PIISDLFQYNQTTCGGTLAAATKLNKQKADIVINWMGGSSHAKYAEANGFCFTNDVVL GILKLLDFHPRVLYVDIDVLHGDGVEEAFYCTDRVMTVSFHQYGKGVFPGTGNVQSIG AEEGTGYSVNVPLKEGITDKVYQSIFKPIITKVMDRFDPSVIVLQCGPDSLSGDKIGR FNLTLDGHGECVSFLRSFNLPLMLLGGGGFNSDNVAKCWANETAIACGQNLPVRPPGN DYKKYFRSSFRLPVKPSNMANHNRPKELAAIQREIFANLNSLPAVPSVQMQPIQEEIL APLPEVSQVLEMANPDERLPPQVMDSVVAHEGEFYDFENGSGANRGVVQYADMTPPDD WFLDDFFQDLQTIEMRSEMV" CDS join(810637..810723,810773..810892,810935..811030, 811089..811169,811491..811565) /gene="CBG15415" /locus_tag="CBG_15415" /standard_name="CBG15415" /product="Protein CBG15415" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XMB7" /protein_id="CAP33792.1" /translation="MALQLLKRPRPLPAFKDEEKGIYAQWKIKGFYYRKAGFPKMSVK GVARIRYAKLEVEGKLPHFTVSKQLVNIGYVENVNDDILDIRGCDFRLLIFGVQHVEI IRDWLRFLVIRQRIPHSLMGLPFDWQVKPIRDDQELQLSRISPFHCFKIW" CDS 812047..812298 /gene="CBG15414" /locus_tag="CBG_15414" /standard_name="CBG15414" /product="Protein CBG15414" /note="Predicted" /db_xref="GOA:A8XMB8" /db_xref="InterPro:IPR040232" /db_xref="UniProtKB/TrEMBL:A8XMB8" /protein_id="CAP33793.1" /translation="MAYYGNGGYSPYGQPAFGAPPPIFGAPGYIPATVHVHTDGHHHG HHHHHHGFLHELGHALTGHHHHHHHGHHFGHHHHHHGHH" CDS 813371..813622 /gene="CBG15413" /locus_tag="CBG_15413" /standard_name="CBG15413" /product="Protein CBG15413" /note="Predicted" /db_xref="GOA:A8XMB9" /db_xref="InterPro:IPR040232" /db_xref="UniProtKB/TrEMBL:A8XMB9" /protein_id="CAP33794.1" /translation="MSYYGTGGYSPYSQPAFGAPPPVFGAPGYIPPTVHIHTDRHHHG HHHHHHGFLHELGHALTGHHHHHHHGHHFGHHHHHHGHC" CDS 815254..815502 /gene="CBG15412" /locus_tag="CBG_15412" /standard_name="CBG15412" /product="Protein CBG15412" /note="Predicted" /db_xref="GOA:A8XMC0" /db_xref="InterPro:IPR040232" /db_xref="UniProtKB/TrEMBL:A8XMC0" /protein_id="CAP33795.1" /translation="MSYYGNGGYSPYGQPGYGAPPPVSGAPGYIPPTVHGQTDGYHHD HHHHHGFLHEMGHALTGHHHYHHHGHHFEHHHHHHGHH" CDS 816637..816888 /gene="CBG15411" /locus_tag="CBG_15411" /standard_name="CBG15411" /product="Protein CBG15411" /note="Predicted" /db_xref="GOA:A8XMC1" /db_xref="InterPro:IPR040232" /db_xref="UniProtKB/TrEMBL:A8XMC1" /protein_id="CAP33796.1" /translation="MSYYGNGGYSQYTTHQYGTPTHMTSGYTHTTVTVHSDGHHHGHH NHSLHHDLSHHGHHGHHHHDHHHGGHHYDHHHHHHHGHH" CDS join(817765..817774,818237..818399,818543..818821, 818866..819453,820298..820511) /gene="CBG15410" /locus_tag="CBG_15410" /standard_name="CBG15410" /product="Protein CBG15410" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XMC2" /protein_id="CAP33797.2" /translation="MIDDMEDVPLFLTPVTKSEGGDNPAEPGSKELEKFLQRQAPSLK GDEKVGNPLDPFQMIKLFTFGSAKKIILEQSRLQPNSEKELIIVSFSKMEHKVSIISK QFPDTKWSIMIKGQDSVLSNSSFKFDSSLKWNTFTELKLKNDLAKEGTSKNEEKFLQI LTLDVITATSKLFDFISEMYGSVDSRLRLMYDLIDNGLDEIINIFVEKSNMVQYEFFS FDEKETLLKPLLRKLNHPKELTVLSQSYPDFQYHIELRNVLLESFISYGASFMKLDEI MNIKSEKICLFEVNLNQFDLGIIINAWMLGWNPQWKALLMMIDNNYLEIESLVEGKCL PMPVSEDWGFLDRNPQFPLIKFEKDEQIGYRRRRDEDGAAITFSIRQYNVFKIILSPA EATNSYTQYDEWFDTTIKRFMSDDD" CDS 821324..821572 /gene="CBG15409" /locus_tag="CBG_15409" /standard_name="CBG15409" /product="Protein CBG15409" /note="Predicted" /db_xref="GOA:A8XMC3" /db_xref="InterPro:IPR040232" /db_xref="UniProtKB/TrEMBL:A8XMC3" /protein_id="CAP33798.1" /translation="MSYYGNGGYSPYGQPAYGAPPPVYGAPGYMPPTVHVHTDGYHHD HHHHHGFLHELGHALTGHHHHHHHGHHFGHHHHHHGHH" CDS join(822374..822388,822439..822549,822600..823151, 824319..824423,824472..824573,824679..824762, 824810..824896,825028..825114) /gene="CBG27986" /locus_tag="CBG_27986" /standard_name="CBG27986" /product="Protein CBG27986" /note="Partially confirmed by transcript evidence" /db_xref="UniProtKB/TrEMBL:B6IJS8" /protein_id="CAS00158.1" /translation="MDAEEYLRSEEEDTTPGSPITDMNELYQPDEEEEEQVEDQPEVN PVAENGPQPAENDVQIEGNVLPAPVRRLPVITQRNRVIVEDAPPVEQAPAAEIAAIPE EEKSPEQDPNEVAPEDPNEVAPEDLAAPEPVFLVPTGQPQRLPRSSSVITQGNSAPVV VPSAQERQLRPRPQAAPKRAPEDDSGSSAKRHRANQVQEAPVAALGPSSSTSGTNQPE NNSSSAHEVCDSRTQHTDPGERFPHGNDNFCRVKGCDCKNTYQNQSSKKNAEEDELSI KKGVHFKARIRNVAQEKNPEEDNNVERRVQTQTQPYQRRIGIQGPRSFDFFNPDLLRG DIDNEKCSRSRPFLPSTYLHTSDSSHDYRPETRPRPMYEEYMKRRS" CDS 826894..827148 /gene="CBG15407" /locus_tag="CBG_15407" /standard_name="CBG15407" /product="Protein CBG15407" /note="Predicted" /db_xref="GOA:A8XMC4" /db_xref="InterPro:IPR040232" /db_xref="UniProtKB/TrEMBL:A8XMC4" /protein_id="CAP33799.1" /translation="MSYYGNGGYSPYGQPGYGAPPPPIYGAPGYIPPTVIHTNGHHHH GHHHHHHGFLHELGHALTGHHHHHHGHHHGHHHHHHHGHC" CDS complement(828756..829028) /gene="CBG15406" /locus_tag="CBG_15406" /standard_name="CBG15406" /product="Protein CBG15406" /note="contains similarity to Interpro domain IPR002395 (HMW kininogen)" /note="Predicted" /db_xref="GOA:A8XMC5" /db_xref="InterPro:IPR040232" /db_xref="UniProtKB/TrEMBL:A8XMC5" /protein_id="CAP33800.1" /translation="MSYYGNGGYGGAPYGAGHPGYGAPPPVHGAPGYMPPPTVHVHTD GGHHGGHHDVHHHGHHDSHHHGGHHGEHHYESHHESHHHGHHHGHH" CDS complement(join(832319..832898,832950..833083)) /gene="CBG15405" /locus_tag="CBG_15405" /standard_name="CBG15405" /product="Protein CBG15405" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XMC6" /protein_id="CAP33801.2" /translation="MNETPVVDIVTKNQLREDFVDIKEHENTEKYYFQLKVFGKIIDF RRHHFLEAAFNPDESESVIKSIHNYMVHFFGDSMEYLWLTSDCMNPIPQLQNISSCIR VWHVNPDSIDLENFFSTSPPFKKIEFNVFRPTDFSPDSNFYQAESVVTVQHHNTFPSV LRHFQGKQAFVDCTYHNTEDLIELVKRWKSGEAFQKLEVLNFNVSEDDIDQDIVLNGI GAKYIDARKTPPTHTLPRM" CDS complement(836885..837187) /gene="CBG15404" /locus_tag="CBG_15404" /standard_name="CBG15404" /product="Protein CBG15404" /note="contains similarity to Pfam domain PF00646 F-box domain contains similarity to Interpro domain IPR001810 (F-box domain, cyclin-like)" /note="Predicted" /db_xref="InterPro:IPR001810" /db_xref="UniProtKB/TrEMBL:A8XMC7" /protein_id="CAP33802.2" /translation="MQLSKYQQLVQNGILNNMEFSDLFMFSFVSEKMKKLIKSSPQMK RFESVNTIRYDHRNGRTIVCIPYRYRHHKILKISEGDEIKNDCFQLNVSGKMIDFR" CDS complement(840775..841044) /gene="CBG15402" /locus_tag="CBG_15402" /standard_name="CBG15402" /product="Protein CBG15402" /note="Predicted" /db_xref="GOA:A8XMC8" /db_xref="InterPro:IPR040232" /db_xref="UniProtKB/TrEMBL:A8XMC8" /protein_id="CAP33803.2" /translation="MSHHGHGGYAPYGGYGGHGGYGAPPPVHGVPGYMPHGHVETYGG HHGGHIDTHQQVHHETSHHEGHNSGHVYESHHQTSHHGGHHGGHH" CDS complement(842094..842360) /gene="CBG15401" /locus_tag="CBG_15401" /standard_name="CBG15401" /product="Protein CBG15401" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XMC9" /protein_id="CAP33804.1" /translation="MSHQGHDHGSADHCHQDHHEHQDKHDGHHHDTQHDAHGQHVHHA GDHCDTQHGGNHQAGEHCAHTQHDGHAHEHGDGHAHDHDAHGHH" CDS complement(843284..843715) /gene="CBG15400" /locus_tag="CBG_15400" /standard_name="CBG15400" /product="Protein CBG15400" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XMD0" /protein_id="CAP33805.1" /translation="MANNYGNAGYSGPPPNGPYGNAGYNGPNGPYGNNSGQPHQDGIP TLHYGNGGYSGPQAQYGNGGQGQPSGPYGGAGFAGPTVGSGFGNAGYAPPPPHGAPGP GFVPGGVAVHDDHHDDHGKHGKHGKKEHHHHHHHHHHDHRH" CDS complement(join(844859..844909,844956..845097, 845151..845422,845472..846056,846133..846340, 846393..846415)) /gene="Cbr-tnt-2" /locus_tag="CBG_15399" /standard_name="CBG15399" /product="Protein CBR-TNT-2" /note="C. briggsae CBR-TNT-2 protein; contains similarity to Pfam domain PF00992 Troponin contains similarity to Interpro domain IPR001978 (Troponin)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XMD1" /db_xref="InterPro:IPR001978" /db_xref="InterPro:IPR027707" /db_xref="InterPro:IPR038077" /db_xref="UniProtKB/TrEMBL:A8XMD1" /protein_id="CAP33806.2" /translation="MSDEEEVLSGEEEEEVEESLAEEVEEEEAAAEDAPAEEEEPEAA EEEAPVEEKPKPRPPVQEEKPPAEMTEAEAAMLAAKKRHEEEEAAKLLDYEQRRVLEK ERMEQELRELKEKQEKRRAEREEDERQFAERRRQDEERRRKDEEERKAKADAEKARKN EEKSRRQQMMAGSFAGAAVGGPGGKNFTVSSKGEQAASFGNLAQGAKSEGLSKEQQDE AKKAFLNAVCKAQDVSGLMPNDLKDRIKGLHARIVKLEGEKYDLEKRRERQEYDLKEL NERQRQVARNKALKKGLDPEEAASSVHPPKITTASKFDRQIDRRSYGNRRDLFENPFV KPAYTIARGSARPPAEWGRKENEELEQIRKNLEPPKYVEQVKAEGDAARPPCAAIPLQ IPDKDFEDGPAKNPNEGAEVVIPDSEAAAEPVAA" ncRNA complement(853640..853752) /gene="CBG25108" /locus_tag="CBG_25108" /standard_name="CBG25108" /product="RNA transcript CBG25108" /note="C. briggsae probable non-coding RNA" /ncRNA_class="other" CDS complement(join(853997..854188,854238..854411, 854618..854777,854835..855112,855157..855310, 855997..856067,856223..856385,856429..856529)) /gene="CBG15395" /locus_tag="CBG_15395" /standard_name="CBG15395" /product="Protein CBG15395" /note="contains similarity to Pfam domain PF01431 Peptidase family M13 contains similarity to Interpro domains IPR018497 (Peptidase M13, neprilysin, C-terminal), IPR000718 (Peptidase M13, neprilysin)" /note="Predicted" /db_xref="GOA:A8XMD2" /db_xref="InterPro:IPR000718" /db_xref="InterPro:IPR018497" /db_xref="InterPro:IPR024079" /db_xref="UniProtKB/TrEMBL:A8XMD2" /protein_id="CAP33807.2" /translation="MRASTSLLLFFLIMIASCSGSVIPNNIVQNHIKNIADFSVDPCD DFYAHVCPMGISKQDFLKSIFETKLQIVRDYKLEHPENLFVNAFSVDKTKNLSNIVTQ FLHSNESSTLCNIAKKIVSDFTRHLLSFDIEETALLQDWEKSSCEQKMEMVRNLSNPT QKFINSRMVISQAIDGSIASSLMEKLDKKLRQLFQKLKMAVLKELRKTPWAVYNGSLD MYEDALQKINFTTFSDIRKPLKYAQSVFIQAKSKCIDVIRGKYSVEIEDGLCEVIAVG EAVLYINKPMNSIYETDLRDILTDQTAALNSKDTCDTRETFEEDAADLAAYRIVWNLY KKAYTRKTVVKNYESLNKKQLFFYGAAVVLCSPYGMEENPSHDTLHSNSYQRVNSLMS QMDGFSEAFKCKPTDRMVRNRARTCELYGAKADGKEKI" CDS join(862826..863002,863053..863262) /gene="CBG27987" /locus_tag="CBG_27987" /standard_name="CBG27987" /product="Protein CBG27987" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJS9" /protein_id="CAS00159.1" /translation="MHLSWLIGVVFLISIAHPATSNKSSSSPQKHAAFEFMGKLMENH KDDPSPPRKKICYAYYSKDYTKMVQRCFNVDTHLSNNIESNSPDARNIRRPSFARQEP VGYKNYRKIEQIVADFKRAPVKTRRN" CDS join(867720..867929,867981..868199) /gene="CBG27988" /locus_tag="CBG_27988" /standard_name="CBG27988" /product="Protein CBG27988" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJT0" /protein_id="CAS00160.1" /translation="MHPSWIIGVIAIIFIAHPATSIKCFVGPIDTLKMGEFVTCVKVF IAETKQSWYEGSNTTFLEFNKICHVTYEKEYKKVVERCFCDNKHLCNFELESNSPDAH TTTAKPMTASEMPVDQQIRTIEQKIDDFRRASAPVVTGRD" assembly_gap 876907..887515 /estimated_length=10609 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 888948..889019 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(890508..890752,891003..891192)) /gene="CBG27989" /locus_tag="CBG_27989" /standard_name="CBG27989" /product="Protein CBG27989" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJT1" /protein_id="CAS00161.1" /translation="MCSMNESYYEAIKQGYRELVEEDSSERAALLKEKRESASYNFMA VFYGFDDNGYEADDECEDKEIQKANQPNKQSVNVYVEILNDDDTESDGDESDSESFSE SSFTGSSSADESNDGSDDSEGNENGENCINILFSNMIFEKIH" CDS complement(join(894563..894651,894708..895001, 895050..895184,895233..895286,895462..895596, 895650..895898,895946..896000)) /gene="CBG27990" /locus_tag="CBG_27990" /standard_name="CBG27990" /product="Protein CBG27990" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IJT2" /protein_id="CAS00162.1" /translation="MEAPEEPAAPIGVEYTDDEPRYISERFWMTGQRGRRGRIDEPDS TYSEEMLYKEESTDEVHVGPAGAPPAPNSREANVPVGGGAEQAPPPPSPAVVEAVANV AIIASLNNVARPTVETSNEPDDKEDNRSRSSSVSYSEWDETSSSRYYKNCTKLTTGFV NMSDTGSVSFSVEAAPEAAKAVPAAEEAVAEAPKEAPKEATPPPPSPGNELVQAEEPA AADQGEKSEEEAAKAGVKAPAPVEVPVPAQAPVPADAPTPAKAQAPAEAAVPAAEAPN TEAPFPAKAQAPAGHADAAEDSSSKRKADADEQEPEAKKARKGEAEEAGDEKQEEPND GD" CDS complement(join(900045..900287,901066..901145, 901366..901425,902117..903530,903598..905229)) /gene="CBG15389" /locus_tag="CBG_15389" /standard_name="CBG15389" /product="Protein CBG15389" /note="contains similarity to Pfam domain PF00098 Zinc knuckle contains similarity to Interpro domains IPR001733 (Peptidase S26B, eukaryotic signal peptidase), IPR001878 (Zinc finger, CCHC-type)" /note="Predicted" /db_xref="GOA:H8WGZ5" /db_xref="InterPro:IPR001733" /db_xref="InterPro:IPR001878" /db_xref="InterPro:IPR036875" /db_xref="UniProtKB/TrEMBL:H8WGZ5" /protein_id="CCG58587.1" /translation="MTSIGSKSRSNKDKSVDSEKSEARTTTMESWADAMQNQVTLRER KKLVKGYADFIGTSETVVESVREQLGVHSKCSERQKDVIVKPMKEFVSELTKRYNELG SGKWERVVMRIMRQNGLEKLEDLRDAVLPDDLTASARNTETKVFHNQLKLLQDGWRKE KEELEEELSKSKRENDEVVEKLEEAWKDAEKAEETIEELERALLKERKTSEKWRNQLE HDEGKKKEKFSGNKEKTQVHARKSPSRSFNGSSVDWHNERKERKTGESFYKKGDLKNE RSEDWRVKVKNWEVNSSEGDFPERSVRVSERRKCERDSERCSRVSRDSSRMVVECLSR IMRASALPEPEKFDGKGDVKEFKRSFLLKYKSVTERDADMVATLEDKFLKDAARTLFK TLPNRFNRSIESLFEEFEEKLRKRRGDREAEALNEFEELKRKPKQPMWEYLMDVEKWS KRAFPHLEEETMSQLRVTKLMRALRDDPTMQKLMTMKRYEVAKKYQYEFLKDIVLQQE NEDKRRQGLGKSYRHEKKEMSWKKEDSKVAKQDNAKAEIKCYRCQESGHIARDCEAKV IHHVETDGTGRGVGAKMREQIQLLGQKRLMFIDSGAEVSVMLTKVWEALKKGCVRWRQ RVEVLTNPTFALRNVSGKNMPVKGQLKIPIMMRGNKANVWFQLVEDKAEILLFGTNAF ESIGVELAWKPKQEERVKKEGKGPKAKWERNAERAKCETSSATVNHIMTEGNVVENNH FCRKLMEEGGGCKKGKCTVQEGYNVCSSVQQLGVVLSAKGKGVDLEKWNLLKYSKEFQ AQVTTVEKEEALQKFAKECPQVAEAIRKEGAYAEWEEAAVKIRLALKSEIKPRTTIIK EPALIVSPRLKISGRRNILEVRNSHGSDFMEKYEWKKVKNVLWLCIVTKDKEVNQRIF EMIKKLAEEVPEVIMVPFKLECVMKEVDKVTEEWRKRLKTLNNVKLIDPRKEVGKREL PLIVTSSDKYESGKSLLRYLEQEAEDNPCVKRLKAMSAEKEEPHESLSQYLNIQRVAT HEHPRDDPIRVGDITVFNIEGRPIPIVHRVIKVHEKSANDTKFLTKGDNNNVHDRSLY AEKQQWLKRSDVIGRVKGLIPYCGYMTILVNEVPYFKHILIGFMAIVTLLHREY" assembly_gap 901947..902017 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="unspecified" CONTIG join(complement(CAAC03004298.1:1..1684),gap(142),complement (CAAC03004297.1:1..1376),gap(77),complement(CAAC03004296.1:1..2829) ,gap(867),complement(CAAC03004295.1:1..539),gap(155),complement (CAAC03004294.1:1..869),gap(1000),complement (CAAC03004257.1:1..2267),gap(1000),CAAC03001400.1:1..9320,gap(103), CAAC03001401.1:1..66039,gap(116),CAAC03001402.1:1..40619,gap(91), CAAC03001403.1:1..2317,gap(627),CAAC03001404.1:1..95874,gap(371), CAAC03001405.1:1..25087,gap(491),CAAC03001406.1:1..11816,gap(381), CAAC03001407.1:1..56042,gap(120),CAAC03001408.1:1..10251,gap(54), CAAC03001409.1:1..6434,gap(117),CAAC03001410.1:1..1341,gap(272), CAAC03001411.1:1..49462,gap(1000),CAAC03003387.1:1..7507,gap(11), CAAC03003388.1:1..179062,gap(1000),complement (CAAC03001885.1:1..41065),gap(98),complement(CAAC03001884.1:1..958) ,gap(157),complement(CAAC03001883.1:1..2358),gap(45),complement (CAAC03001882.2:1..62222),gap(1001),complement (CAAC03001881.1:1..57933),gap(574),complement (CAAC03001880.1:1..35888),gap(155),complement (CAAC03001879.1:1..95722),gap(10609),complement (CAAC03001878.1:1..1432),gap(72),complement (CAAC03001877.1:1..12927),gap(71),complement (CAAC03001876.1:1..5445)) //