LOCUS       HE600999              664223 bp    DNA     linear   CON 17-SEP-2015
DEFINITION  Caenorhabditis briggsae AF16 supercontig from assembly CB4,
            cb25.fpc0011c.
ACCESSION   HE600999 CAAC03000000 CAAC02000442
VERSION     HE600999.1
DBLINK      BioProject:PRJNA10731
            BioSample:SAMEA3138181
KEYWORDS    .
SOURCE      Caenorhabditis briggsae
  ORGANISM  Caenorhabditis briggsae
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 664223)
  AUTHORS   Howe K.L.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (03-OCT-2011) to the INSDC. WormBase group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UNITED KINGDOM.
REFERENCE   2  (bases 1 to 664223)
  AUTHORS   Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
            Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A.,
            D'Eustachio P., Fitch D.H., Fulton L.A., Fulton R.E.,
            Griffiths-Jones S., Harris T.W., Hillier L.W., Kamath R.,
            Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P.,
            Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M.,
            Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R.,
            Waterston R.H.
  TITLE     The genome sequence of Caenorhabditis briggsae: a platform for
            comparative genomics
  JOURNAL   PLoS Biol. 1(2), E45-E45(2003).
   PUBMED   14624247
REFERENCE   3  (bases 1 to 664223)
  AUTHORS   Ross J.A., Koboldt D.C., Staisch J.E., Chamberlin H.M., Gupta B.P.,
            Miller R.D., Baird S.E., Haag E.S.
  TITLE     Caenorhabditis briggsae recombinant inbred line genotypes reveal
            inter-strain incompatibility and the evolution of recombination
  JOURNAL   PloS Genet. 7(7), E1002174-E1002174(2011).
COMMENT     Details of C.briggsae assembly version CB4:
            
            To improve upon the C. briggsae nuclear genome assembly CB3, 167
            AF16/HK104 advanced-intercross recombinant inbred lines were
            successfully genotyped at 1,032 single nucleotide polymorphism
            (SNP) markers. The resulting data were used to estimate
            high-density genetic maps. Sequences were assembled by combining
            the physical and genetic positions of the SNPs to inform the
            process of ordering and orienting the cb25 supercontigs into
            chromosome assemblies.
            
            37 of the cb25 fingerprint contigs were split into 100
            supercontigs to resolve discrepancies between the physical and
            genetic orders of SNPs. 638 sequence supercontigs comprise the CB4
            assembly.
            
            The total nuclear genome content decreased from cb25 to cb4
            because of the removal of three supercontigs containing
            mitochondrial genome sequence (totaling 20.1 kbp).
            
            Assembly_name: CB4
            Assembly_program: Phusion
            Seq_technoloy: capillary (whole-genome-shotgun)
            Seq_coverage: 10x
            
            Annotation details:
            
            Coding seqences below are the result of integration and manual
            review of the following data : computer analysis using the
            programs Genefinder (version 980506; P. Green, unpublished data),
            FGENESH (Salamov and Solovyev 2000), TWINSCAN (Korf et al. 2001),
            and the Ensembl annotation pipeline (Clamp et al. 2003);
            similarity to other proteins from BlastX analyses
            (http://blast.wustl.edu); sequence conservation with C. elegans
            using Jim Kent's WABA alignment program (Genome Research
            10:1115-1125, 2000); individual C. briggsae GenBank submissions;
            and personal communications with C. briggsae researchers. tRNAs
            are predicted using the program tRNAscan-SE (Lowe, T.M. and Eddy,
            S.R., 1997, Nucl. Acids. Res., 25, 955-964).
FEATURES             Location/Qualifiers
     source          1..664223
                     /organism="Caenorhabditis briggsae"
                     /strain="AF16"
                     /mol_type="genomic DNA"
                     /note="supercontig cb25.fpc0011c"
                     /db_xref="taxon:6238"
     CDS             join(3494..3580,3850..3966,4481..4554,4870..4945)
                     /gene="CBG25508"
                     /locus_tag="CBG_25508"
                     /standard_name="CBG25508"
                     /product="Protein CBG25508"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:B6IEP8"
                     /protein_id="CAR98378.1"
                     /translation="MASVSIRVRNEDGDDFVVSPTDVVNNINEIESRRNSRRDSTPAS
                     SIRRSRPSSAFFNENGEPIEGITRARKSKSVRDAEPGLRSMLYGLSQKQEKEEAEAKK
                     LAKKMISKSSLVSYL"
     CDS             join(6058..6295,12759..12895)
                     /gene="CBG25507"
                     /locus_tag="CBG_25507"
                     /standard_name="CBG25507"
                     /product="Protein CBG25507"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:B6IEP7"
                     /protein_id="CAR98377.1"
                     /translation="MDCLCFGWNSKKQKTLENEEIEDDVEEKIQKKPKKKNTSSCLLR
                     LHISLLNSLQKWIDRNIDERRASRNTQNFVNTVECLGHKTQVLDEQKQKEEHMGINNL
                     KEESRSKPSSAHHQAAEVPRLK"
     assembly_gap    6585..8482
                     /estimated_length=1898
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             join(15465..15840,16415..16464)
                     /gene="CBG00611"
                     /locus_tag="CBG_00611"
                     /standard_name="CBG00611"
                     /product="Protein CBG00611"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WNG6"
                     /protein_id="CAP22020.2"
                     /translation="MLTPTFHTNPSCLLQKAKSEEVAPSTSSNNSSTTTPPLHRRALI
                     RQCASVEPLQAEPASPKRLRPRSRLENLRNFLPKHLRSVTVSPSKIRSETMHSLHNLH
                     SITVATVAEPGMLKKSISEFVIGYPANSFSAKFLNKNSF"
     CDS             join(18946..19045,20157..20500)
                     /gene="CBG25506"
                     /locus_tag="CBG_25506"
                     /standard_name="CBG25506"
                     /product="Protein CBG25506"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:B6IEP6"
                     /protein_id="CAR98376.1"
                     /translation="MTSLLTASYHSLRAKSPIGDLLPGLRPSTSTALITILIWSVAQC
                     VPPTKYTRSIDRAQQSAHGSRKSDGKAAGTIRGVRELPTEEYFRVIVGYGCIERVTIT
                     RILTIYSSGTGVTINWEFESAAVQKGKEEAESAKDMAGHVAWQLF"
     CDS             join(22155..22218,22362..22477,24037..24204,25637..25774,
                     25825..25914,26277..26467,42243..42414,42681..42797,
                     43677..43776,43850..43923,43999..44136,44643..44762,
                     47322..47405,49576..49709,49761..49896,49946..50104,
                     50395..50475)
                     /gene="CBG00613"
                     /locus_tag="CBG_00613"
                     /standard_name="CBG00613"
                     /product="Protein CBG00613"
                     /note="contains similarity to Pfam domain PF00102
                     Protein-tyrosine phosphatase contains similarity to
                     Interpro domains IPR003595 (Protein-tyrosine phosphatase,
                     catalytic), IPR016130 (Protein-tyrosine phosphatase,
                     active site), IPR000242 (Protein-tyrosine phosphatase,
                     receptor/non-receptor type)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNG4"
                     /db_xref="InterPro:IPR000242"
                     /db_xref="InterPro:IPR000387"
                     /db_xref="InterPro:IPR003595"
                     /db_xref="InterPro:IPR016130"
                     /db_xref="InterPro:IPR029021"
                     /db_xref="UniProtKB/TrEMBL:A8WNG4"
                     /protein_id="CAP22018.2"
                     /translation="MGFLFDRCIQYCRRTVDRYHEVQEEKAMQAVPTAPIDASKFVAY
                     VQERRKKRILFKGEYLMVNRSIDNNKCRCDVGSTMTDRNPYPDTLPYDHNRVILPRID
                     NDENSHYINASYVNSWLKDKAYVVTQAVRTKPMNAEFWRMVWELGSNCIVMLTKVFDF
                     MRVMCLQYWPQTKFQFREIEVETTEVKTYSHFVIRTFKLTRKTEESIETRIVKHFHFT
                     EWELDSFPYISAFIELRRRVRQFMEKSPVDAPMVVHCSNGAGRSGAFLALDANLELMK
                     KTGQLDFFEYAKTLVNSRPHLIDSVEQYMFIYEVLSEAVMCNVQPIEMHLLKERSSMY
                     KAKKNRELLESQETHENKLLMHLTPTLRIGDCAGGHRLENRGKNRDVMVVPPDHARPY
                     LQTLHGESKDYTYINAVEVDGFTRKAEFIVTEWPKQSTVDSFWTLIYDHACHTVVNLS
                     NQGSTRHYPSFIHNKGKQNYGPFIVEVMNYHQYPAMTSHMVKVMKRTFMISDIMATGA
                     QNQQIDAEVRICCVIQVRMWPIENKVPLSTTGLIDVIKMARSWRKRAPDRPETKPTIV
                     MSHNGVSRVGVYIGANICIDQMDIDHEVDVFHAVKMMRINRPQLIDMKDEYKYLYDVM
                     LHWYMTNPDYRIYDKEDSEDTDSQKTSRPPSNRHSIKEKSSFRSKFSFRRRNTTRQNE
                     NNAVEYHVNNK"
     CDS             complement(join(26889..27032,27167..27281,27332..27447,
                     27525..27689,28650..28744,28966..29076,29134..29203))
                     /gene="CBG00614"
                     /locus_tag="CBG_00614"
                     /standard_name="CBG00614"
                     /product="Protein CBG00614"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WNG5"
                     /protein_id="CAP22019.1"
                     /translation="MQLWLLMILLVSVIDLVDSRLPRARFRRRGPTGFFLARIQKQYD
                     DDYDSTEDSGSSRKSTVDGSRRRDEVVNDAKCLQKCNNQLNIGMDMVNAHMAFGSIDV
                     PSVVEKRDLEMFCMLDYQHSQCIDECGYSVQFNLREYVCRNRFPEMLQHLPCYARAAP
                     ALIRHCRPRCGGYKALVHTQDGYSQRCRQLLCDHTCSTYILKRLCPDETGIAASNYLL
                     EFTRLQVEYWMKDFTKQSKSRIPLTCRKVQCRDFKLANCRSTARRYRKRVVDN"
     assembly_gap    31661..41343
                     /estimated_length=9683
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             complement(join(52174..52474,52586..52851,53177..53348,
                     53504..53822,53873..53981))
                     /gene="Cbr-gbh-2"
                     /locus_tag="CBG_00615"
                     /standard_name="CBG00615"
                     /product="Protein CBR-GBH-2"
                     /note="C. briggsae CBR-GBH-2 protein; contains similarity
                     to Pfam domain PF02668 Taurine catabolism dioxygenase
                     TauD, TfdA family contains similarity to Interpro domains
                     IPR012776 (Trimethyllysine dioxygenase), IPR003819
                     (Taurine catabolism dioxygenase TauD/TfdA)"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:A8WNG3"
                     /db_xref="InterPro:IPR003819"
                     /db_xref="InterPro:IPR010376"
                     /db_xref="InterPro:IPR012776"
                     /db_xref="InterPro:IPR038492"
                     /db_xref="InterPro:IPR042098"
                     /db_xref="UniProtKB/TrEMBL:A8WNG3"
                     /protein_id="CAP22017.2"
                     /translation="MFVQRRLSSSITRVIGWNFKNIRSKNDSLEVTFEEDGKPSKLIM
                     PLAWLRDHCTSKTHYHYPTNQRKSNCTDLMNLSRIEGSDKISMDQNQKSLIIDWIDGH
                     RSVFEIGDVVGKGRKKKGEKMDGVLKLWDSKTLGGVPRIEKSNLSLQSFSENLVKYGV
                     VIIDGIEGTAEATEKLCQSLVPVHDTFFGQFWVFSNSATQDEPAYEDTAYGNEEIGPH
                     TDGTYFNQTPGIQVFHCLTPANVGGDTVVVDSFHCAQILKNKHPEHFETLCNTKIAHH
                     YLEGLRLAARSKVFNPYDRAPYSCLSSSESSASGAIKFYEAYQEFSRICHDHLNALTV
                     SLRPGSVIFIDNFRVLHSRTAFQGYRKMCGCYLSRDNFMAKARPFFDGNVKEFL"
     CDS             join(56663..56782,56864..57075,57144..57300)
                     /gene="CBG00616"
                     /locus_tag="CBG_00616"
                     /standard_name="CBG00616"
                     /product="Protein CBG00616"
                     /note="contains similarity to Pfam domain PF06388 Protein
                     of unknown function (DUF1075) contains similarity to
                     Interpro domain IPR009432 (Protein of unknown function
                     DUF1075)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNG2"
                     /db_xref="InterPro:IPR009432"
                     /db_xref="UniProtKB/TrEMBL:A8WNG2"
                     /protein_id="CAP22016.1"
                     /translation="MLSSVIRCGGHQAASSKMTPAVSMAIRRFDPLEAKMAQKKAELM
                     AQQQQAEGDQHRVTYATKDDFKHTVQDSRFTGAADSETGQVPTKWQKKFLVITKLYPS
                     VEDIPPFVHHGTMNRMHDRMRVVFIVTASIFFFSTFYIAERAMAQKIARDRDAGVVVH
                     KM"
     CDS             join(57528..57671,58513..58661,59393..59537)
                     /gene="CBG00617"
                     /locus_tag="CBG_00617"
                     /standard_name="CBG00617"
                     /product="Protein CBG00617"
                     /note="contains similarity to Pfam domain PF04588 Hypoxia
                     induced protein conserved region contains similarity to
                     Interpro domain IPR007667 (Hypoxia induced protein,
                     domain)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNG1"
                     /db_xref="InterPro:IPR007667"
                     /db_xref="UniProtKB/TrEMBL:A8WNG1"
                     /protein_id="CAP22015.1"
                     /translation="MGIFRTVLMNAAGVQKEEPKKGSYEWKKEHMTPEQLARTADNKE
                     KYTGIPAIPVDIGYHGGKNVGGAQQTGVMSNAASNPGVILGMGLTTAALLGMFKSSFV
                     GDKLGAQKMMQYRIMAQFFTVTALVAGVTIFGATYEDEEHAQK"
     assembly_gap    57898..58145
                     /estimated_length=248
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             join(59806..59939,60804..61324,61913..62112,62160..62396,
                     62605..62784)
                     /gene="Cbr-lact-4"
                     /locus_tag="CBG_00618"
                     /standard_name="CBG00618"
                     /product="Protein CBR-LACT-4"
                     /note="C. briggsae CBR-LACT-4 protein; contains similarity
                     to Pfam domain PF00144 Beta-lactamase contains similarity
                     to Interpro domain IPR001466 (Beta-lactamase-related)"
                     /note="Predicted"
                     /db_xref="InterPro:IPR001466"
                     /db_xref="InterPro:IPR012338"
                     /db_xref="UniProtKB/TrEMBL:A8WNG0"
                     /protein_id="CAP22014.2"
                     /translation="MLYKVAWFIGVALVFVAIRNTNPEREIHVDGDVAKEWSHVADVF
                     KKNLEENWERSGAAFVVYHKGQKVIDIWGGYSDRESQRKWTRDTLSVAFSCSKAIGAI
                     VIAKLVDEGRMEYDDLVTKYWPEFGKNGKANVTIRWLITHKAGLAYTDHPIEWEDAID
                     SKKIDRILADQKPNWPPGTEIGYHAVTHGWLVDAIVRRVDHKKRTVGQYFREEIGQKF
                     GLDFHLGLPLSEQHRVARIENPNFWNVLEEIVYAPSDFDVIRFLRDRITNGTLSKTTA
                     STPFIKFVGAMTLNNPDLHRIEQPAVLGIGTARALAEIFELLRQNKIVSENVKRQMFF
                     ENYEMSEDFISGAKVPRGQGFMLKEFQHRGNPVKMYGHSGYGGQNIRTDFDHEITICY
                     FSNGLKVGFGDTARTYKRLLEVVYDTYFKLE"
     CDS             complement(join(63476..63611,63849..64159,64397..64535,
                     64582..64771,65562..65793))
                     /gene="CBG00619"
                     /locus_tag="CBG_00619"
                     /standard_name="CBG00619"
                     /product="Protein CBG00619"
                     /note="contains similarity to Pfam domain PF06852 Protein
                     of unknown function (DUF1248) contains similarity to
                     Interpro domain IPR009658 (Domain of unknown function
                     DUF1248)"
                     /note="Predicted"
                     /db_xref="InterPro:IPR009658"
                     /db_xref="UniProtKB/TrEMBL:A8WNF9"
                     /protein_id="CAP22013.2"
                     /translation="MNTLFQQRSKITALCHMAIRRYSIENVLPKDLKVVKNPSDSQIE
                     QFQKLVVRDGGNEIPMLKETMKERYHLYLLCQKDSTVVSGTQSIIYKSLNPSTPDFQV
                     FGLFYQHENTFNFLPHLMSEMAADLNSVSMNSGGCVGRIFEDSKNAAIWRKVLHTKVR
                     GSTYYVSDYTSDEVFNPELEFDDVAVKKFQDIPADDIVKYDNTIFPYQRQELLLAKFK
                     GGIGRVAYDKSGKVIGIGLVSFDKSSGNCEIGPIYSDTKNAAQAMFHSILGEMNGGFK
                     EIRVRCSDKFEGSATWVRPFLRRRHEMTPFAYVKFNRVIPDGLNMSKVFVSSSPSSAP
                     C"
     CDS             join(69147..69338,69391..70824,70906..70998,71095..72579,
                     72626..73557,73619..73766)
                     /gene="Cbr-zyg-9"
                     /locus_tag="CBG_00620"
                     /standard_name="CBG00620"
                     /product="Protein CBR-ZYG-9"
                     /note="C. briggsae CBR-ZYG-9 protein; contains similarity
                     to Interpro domain IPR002097 (Profilin/allergen)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNF8"
                     /db_xref="InterPro:IPR011989"
                     /db_xref="InterPro:IPR016024"
                     /db_xref="InterPro:IPR021133"
                     /db_xref="InterPro:IPR029632"
                     /db_xref="InterPro:IPR034085"
                     /db_xref="UniProtKB/TrEMBL:A8WNF8"
                     /protein_id="CAP22012.2"
                     /translation="MSNWDYIDEVDIIPKLPPNFDELRESKKWQERKEALEALLKVLT
                     DSERLSTKVSYAELIGNVQTVLAKDANINCQALAAKCIAKFATGLRTKFSAFATPLLP
                     VIFDKMKEKKPTLREPLVECAMEVGRTMPSLEAGQEDILAALAKPNPQIKQQTALFVA
                     KQLDLVVPAKQPKGFIKAAVPVFGKLTGDADQDVREASLQALGAVQRIIGDKNVKSLL
                     GDLSSDEGKMKKIGEYADKSAASYAEEQAKNAPPPSSSASAPSAAAASGSSGNVTSAA
                     VTTAEPAAEADPWDFLDAFDVLSKMPEGFDTNIESKKWQERKEALEGLQQLLTANPKL
                     DPKANYGALVERLQKVLEKDANINVAALAANCITGIANGLRTKFQAFAISVAPIVFEK
                     FKEKKPTLRDPLVACIDAVVATSNLEALGEIVLTALGKPNPSIKTQTDLFLQRTFMKL
                     NSQTMPKKTLKTLVPLLIKHSGDSDAEVRDASYAAMGAMMRAIGEKPSLQLLADIVTD
                     NLKMGKIKEYHQKALAEAGPAEIAAMVQSMHKADAPPAAAAPPKKAAPPPKRQESEEE
                     QVEEEEEPLKLPAGEKKKEEKKKAAPTKENAENEPPVAPKTELLLNDNGEKAQRIKEE
                     KQLKLVKWNFQTPTDEHIAQLQTLLGNQAKVSLMSQLFHKDFKQHLAALDTLIRLADT
                     APRSLLANSDLLLKWCTLRFFETNPAALIKVLELCRVLVELTRDTETPMSQEELTAFV
                     PYLLLKTGEAKENMRTAVRDIINVLSDIVGPLKMTPMLLDALKSKNARQRSECLLVIE
                     SYISSSGISPLKSLTVEKIVAPFVGDKDVNVRNAAINVLVACFKFEGDQMWKAAGRMA
                     DKDKSLVEERIKRSGVKAGSGVATSPPNGGPKIVVPQQQQSVVRRPASRSRTREPEPE
                     DDYQDQRAIANSTFTKGNSSSRYALRDDVFATAINRLADSTYVVTPPQPPSAWANNTF
                     QMKRTNSSSSISSIDTSDQIQRSINNISSSLADVAQDAMYQVTYVLNQPEQRHLVDRK
                     ADMVFRASAAQLDMIIDEFKAGKDVTGTMDACSQMLFILMGGVEAEHGLEPLNASPET
                     VKAIISSVLRCITQIGSTDAGYTMARSLNRLAMRLVYRVELSNLLCGLILAMIESIQL
                     NSGITDLVSKLSSKWCDELEKRRAQLRASDIVDVFNQFYICTLTEQKMDITHIHIQVV
                     DNYLERVILQQGDVVLDAARRLSSPHIHLTRMINKILQMMKEQNIDPIMPGTLDARAP
                     DEEEAVVVRTGVQVCVNNILRDLKNVSTYNEQLNKLVQSSDKCRNEYSELVKNHALGE
                     AVEELVSEQTIHGAPNFNKPDVVNAMTMTWKALDLLGPTRAETPTTPPQNLSRMDTTI
                     VGTPLSRAEGAGTITRARGNIMRPKQRPTMSREQHEELRNRLQQAKFGQ"
     CDS             join(74231..74288,74349..74404,74500..75537,75593..76216)
                     /gene="Cbr-fars-3"
                     /locus_tag="CBG_00621"
                     /standard_name="CBG00621"
                     /product="Protein CBR-FARS-3"
                     /note="C. briggsae CBR-FARS-3 protein; contains similarity
                     to Pfam domains PF03483 (B3/4 domain) , PF03484 (tRNA
                     synthetase B5 domain) contains similarity to Interpro
                     domains IPR004531 (Phenylalanyl-tRNA synthetase, class
                     IIc, beta subunit, archae/euk cytosolic), IPR005146 (B3/B4
                     tRNA-binding domain), IPR005147 (tRNA synthetase,
                     B5-domain)"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:A8WNF7"
                     /db_xref="InterPro:IPR004531"
                     /db_xref="InterPro:IPR005146"
                     /db_xref="InterPro:IPR005147"
                     /db_xref="InterPro:IPR009061"
                     /db_xref="InterPro:IPR020825"
                     /db_xref="InterPro:IPR040659"
                     /db_xref="InterPro:IPR041616"
                     /db_xref="UniProtKB/TrEMBL:A8WNF7"
                     /protein_id="CAP22011.1"
                     /translation="MPTVGIKKVILDKHFNRNYTEKEFDELCFEYGLELDEITSEKAA
                     VEKERGTDAAVDLNDQEVYKIDIPANRYDLLSVEGLARAIRIFKQEIPSPQYKFADVP
                     KSGLQKIIVKKETAQVRPFVVGAVLRNISFDADSYASFIDLQDKLHQNICRKRTLVAI
                     GTHDLDTVQGPFEYRAEAPKDIKFKPLNQTKEYTAEELMTLYSSDSHLKAYLPIIQNH
                     PVYPVIYDKNGVVCSMPPIINGEHSKITLNTKNVFIEATATDKQKAFVVLDTIVTLFS
                     QYCAKPFTVEQVEVVYEETGVKEVYPLLAYREMTVTTPEINTKIGIQLKEEEMATLLN
                     KMSLKAEVVGKETLKVVVPPTRHDILHACDVAEDVGVAYGYNNLVTRLPESNTVAVAF
                     PINKLCDNLRIEIAAAGWTEALNFALCSRDDISTKLRQPEALSHAVHIGNPKTLEFQV
                     ARTSLLPGLLKTLASNRDMPLPLKLFELQDVIVKDSTMDVGARNERRLAAVYYNKAAG
                     FEIIQGFLDRMMRMLNVNPAKADNGYYIEADENPTYFPGRCAKIIGPKGVVLGHIGAL
                     HPEVITSFGLTLPCGAVEFNVEPFL"
     CDS             join(76439..76828,77755..77925)
                     /gene="CBG00622"
                     /locus_tag="CBG_00622"
                     /standard_name="CBG00622"
                     /product="Protein CBG00622"
                     /note="contains similarity to Pfam domain PF01956 Integral
                     membrane protein DUF106 contains similarity to Interpro
                     domains IPR008559 (Uncharacterised conserved protein
                     UCP023322, transmembrane eukaryotic), IPR002809 (Protein
                     of unknown function DUF106, transmembrane)"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:A8WNF6"
                     /db_xref="InterPro:IPR002809"
                     /db_xref="InterPro:IPR008559"
                     /db_xref="UniProtKB/TrEMBL:A8WNF6"
                     /protein_id="CAP22010.1"
                     /translation="MLADCLLIIGIAFGTALAGEGITWLLVYRSDQYKRLKADMDKKT
                     KKLEKKKQEVGDTNDKNIKKKLEREEEKLKATNRDMSMFKMKSMFAIGLAFTALLSTF
                     NSIFDGRVVAKLPFYPIGFIQGLSHRNLIGDDMTDCSFIFLYILCTMTVRQNLQKILG
                     FAPSRAMARQQSSPWAPPSSQMNYLR"
     CDS             join(78308..78676,79208..79431,79482..79997,80285..80440,
                     80489..80563,80613..80784)
                     /gene="CBG00623"
                     /locus_tag="CBG_00623"
                     /standard_name="CBG00623"
                     /product="Protein CBG00623"
                     /note="contains similarity to Pfam domain PF05794
                     T-complex protein 11 contains similarity to Interpro
                     domain IPR008862 (T-complex 11)"
                     /note="Predicted"
                     /db_xref="InterPro:IPR008862"
                     /db_xref="UniProtKB/TrEMBL:A8WNF5"
                     /protein_id="CAP22009.2"
                     /translation="MSDNEEKPSRKRPVTPPKSIPIPGAQEPSSAPSLPPWVAGGSPA
                     KFVTHDELMKITNDMENMELVHEIAIDPNFQIPDKPTNAIQNCVRESMHRAYYNQLRR
                     DLAKDPPELEFCFGFLMELKIMILDDILTAQHTRLKAEINSMLDEPTLRGKMEAGQLE
                     IDKVMKYIIDLCSRLCSPGRDGLVAALREKTDIIDLFQGTMDLLELMKNDLTNYQISQ
                     NRSAIEEYSAKHEYKMFQKSLAENPNGCNFTRQWLKIAYEELFTDKDSEEGTSSKKEK
                     PADDPENEKYLVDTTSRGYVKLVQVDEYSDFPETLKIDRLKIELLAEKFLQIVMCASA
                     VFVTCNVAGRQISESDGFKKTLKDHLVAITNNTDEERIKADLEKIGEQCVKEASDTAV
                     TLKLDWNPGNSVSIRNQINALINLDNPIRNPTSVPHRLLPGLSVIQSELCAFTSKFLR
                     LCVHNRKTFYTLYSSLILEFQGHAPSTHAVYHADSPSSMPGPSSSQPGPSSSF"
     CDS             complement(join(80890..80986,81043..81134,81185..81369,
                     81560..81698))
                     /gene="CBG00624"
                     /locus_tag="CBG_00624"
                     /standard_name="CBG00624"
                     /product="Protein CBG00624"
                     /note="contains similarity to Pfam domain PF01549 ShK
                     domain-like contains similarity to Interpro domain
                     IPR003582 (Metridin-like ShK toxin)"
                     /note="Predicted"
                     /db_xref="InterPro:IPR003582"
                     /db_xref="UniProtKB/TrEMBL:A8WNF4"
                     /protein_id="CAP22008.1"
                     /translation="MKYSILLVFLVSSVTVDSINWESTFREEQFLKNHALEQVDEGSG
                     DTDEVLVSESTTTSSTSSTSSTTSKPPSTTKNPLTTPSAPTNCYDISKKCARVKPLCT
                     KEAYKAIMMRKCAKTCNFCPQFARLPHAARCRDAFRSCPIWARNGFCHSTYYTMEERR
                     TYCQKSCQAC"
     assembly_gap    82336..82345
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             complement(join(82769..83063,83668..83885))
                     /gene="CBG00625"
                     /locus_tag="CBG_00625"
                     /standard_name="CBG00625"
                     /product="Protein CBG00625"
                     /note="Predicted"
                     /db_xref="GOA:A8WNF3"
                     /db_xref="UniProtKB/TrEMBL:A8WNF3"
                     /protein_id="CAP22007.1"
                     /translation="MSLSKSSAPSTARSVFRFVFSRNASTSSPTPTPARIQIKVPSAE
                     QGHFQYSRNWSRDPRFVKVAIQKGDTPYQFLVRRLGHAYEVYPLFFLTGAWFALFLSA
                     TYWSFGKAEIWLDRSHTTAPWDWERLRDNYWKLPTVAFDMDGRTRKRCEIMEQLQDEM
                     LEAAKKRGTR"
     assembly_gap    83309..83322
                     /estimated_length=14
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    86031..87813
                     /estimated_length=1783
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             complement(join(90350..90496,91054..91194))
                     /gene="CBG00626"
                     /locus_tag="CBG_00626"
                     /standard_name="CBG00626"
                     /product="Protein CBG00626"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WNF2"
                     /protein_id="CAP22006.1"
                     /translation="MTIYSYTSFMSSPVSVHVAERITCAVVGPPGEWKGRVRFPRWSL
                     IDDPKPSLLHVIRSPDLLHLQMSIYSYTSSMSSHASVPVAEMITCAVVGPP"
     CDS             join(95388..95508,95551..95776,95994..96606,96658..96861)
                     /gene="Cbr-cut-3"
                     /locus_tag="CBG_00627"
                     /standard_name="CBG00627"
                     /product="Protein CBR-CUT-3"
                     /note="C. briggsae CBR-CUT-3 protein; contains similarity
                     to Pfam domain PF00100 Zona pellucida-like domain contains
                     similarity to Interpro domain IPR001507 (Zona pellucida
                     sperm-binding protein)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNF1"
                     /db_xref="InterPro:IPR001507"
                     /db_xref="UniProtKB/TrEMBL:A8WNF1"
                     /protein_id="CAP22005.1"
                     /translation="MQRFTIGLGLCLLAASVSAIPVDNNVEGEPEIECGPTSITVNFN
                     TRNAFEGHVYVKGLFDQQECRNDEGGRQVAGIELPFDTCNVARTRSLNPKGVFVTTTV
                     VVSFHPQFVTKVDRAYRIQCFYMEADKTVSTQIEVSDLTTAFQTQVVPMPICKYEILN
                     GGPTGEPVQFATIGQQVYHKWTCDSETVDTFCAVVHSCTVDDGNGDTVQILDENGCAL
                     DKFLLNNLEYPTDLMAGQEAHVYKYADRSQLFYQCQISITVKEPHEECARPTCSEPQG
                     FGAVKQANQTAQFFRVLKKRSVEAMENVLDVRAELTTLEVLEGDLPASLRTSAEALVA
                     SSEIGYDTFGQGFCVSYFAVSIASVFAGFTIFVAIFMTYMIVSRVPRSKNSDC"
     CDS             join(99562..99668,100186..100651)
                     /gene="CBG00629"
                     /locus_tag="CBG_00629"
                     /standard_name="CBG00629"
                     /product="Protein CBG00629"
                     /note="contains similarity to Pfam domain PF07735 F-box
                     associated contains similarity to Interpro domain
                     IPR012885 (F-box associated domain, type 2)"
                     /note="Predicted"
                     /db_xref="InterPro:IPR012885"
                     /db_xref="UniProtKB/TrEMBL:A8WNF0"
                     /protein_id="CAP22004.1"
                     /translation="MNFSSDSMKNRNQFRFLDLPIVVTRNVVSTKDPLDIFWLNLLEG
                     RIKESVEWVKLRFPNVERIHINGPNVPQKDVQYVLDNITPTNKFRKTAESNENLLWRI
                     EGTFEQIRIGSGSWITVDHAMNFSFPYVVVMGTTITNQELNLILKNWIDMKCHLKTKQ
                     LEINLMDGENFLDTVLENIPYEIGQPIVPL"
     CDS             join(101798..101883,102248..102994,103052..103175)
                     /gene="CBG00630"
                     /locus_tag="CBG_00630"
                     /standard_name="CBG00630"
                     /product="Protein CBG00630"
                     /note="contains similarity to Pfam domains PF07735 (F-box
                     associated) , PF00646 (F-box domain) contains similarity
                     to Interpro domains IPR001810 (F-box domain, cyclin-like),
                     IPR012885 (F-box associated domain, type 2)"
                     /note="Predicted"
                     /db_xref="InterPro:IPR001810"
                     /db_xref="InterPro:IPR012885"
                     /db_xref="UniProtKB/TrEMBL:A8WNE9"
                     /protein_id="CAP22003.1"
                     /translation="MKNRDKFRFLDLPIVVTRNVLSTMDPFDILDLSRTSKRGRWYAK
                     LKHVMLEKCPHLMIEYEGNWYDFVMTDEKEKDRKRETEIDDTYGKQFEIVYVYSNNIM
                     KDFNKLYTNAISVMNKKIRCISFWMNPLEGRIEESVKWVKLRFPTIDCITIIGQNVPQ
                     KDVQYILDNITPTLILRLMAETKEKLPLRIKGTFEQLMIENGSWITVDHATNFSFPYV
                     AFMRTTITNQELNLILKNWIDMKCHLNTKQFEINLIDKDNFLGTVLENIPYEIGQPMV
                     PVNLYHNLVGEGYDIKRIDGLEASVYTCEGTMGLVMGLKTKN"
     CDS             join(104998..105047,108694..108960,109012..109258,
                     110616..110675)
                     /gene="CBG25505"
                     /locus_tag="CBG_25505"
                     /standard_name="CBG25505"
                     /product="Protein CBG25505"
                     /note="contains similarity to Pfam domain PF02787
                     Carbamoyl-phosphate synthetase large chain,
                     oligomerisation domain contains similarity to Interpro
                     domain IPR005480 (Carbamoyl-phosphate synthetase, large
                     subunit oligomerisation domain)"
                     /note="Predicted"
                     /db_xref="GOA:B6IEP5"
                     /db_xref="InterPro:IPR005480"
                     /db_xref="InterPro:IPR016185"
                     /db_xref="InterPro:IPR036897"
                     /db_xref="UniProtKB/TrEMBL:B6IEP5"
                     /protein_id="CAR98375.1"
                     /translation="MHIRKGGDLALKIFEFHRPPTADDLEKPTDKRMLALARGMYYSD
                     FDLEEAHALTAIDGWFLFRMQNIVDIYHRLEKEDVTTVTGELLLEAKQAGVSDRQLAK
                     KIGSNEYTVRQARFAKGITPCVKQIDTVAGEWPTQTNYLYTTFIRVEDDVRFNMKNAV
                     MVLGSGVYRIGSSVEFHLSCVVWIRELKPEETSVFGGFILFVAIFMT"
     CDS             complement(join(105445..105561,105608..105738,
                     107471..107575,107621..107651))
                     /gene="CBG00631"
                     /locus_tag="CBG_00631"
                     /standard_name="CBG00631"
                     /product="Protein CBG00631"
                     /note="contains similarity to Pfam domain PF00025
                     ADP-ribosylation factor family contains similarity to
                     Interpro domain IPR006689 (Small GTPase superfamily,
                     ARF/SAR type)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNE8"
                     /db_xref="InterPro:IPR006689"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="UniProtKB/TrEMBL:A8WNE8"
                     /protein_id="CAP22002.1"
                     /translation="MDKSWAVGSNESPITRGRRKAAEEAKNKAENAKMNLGRTEAVGS
                     DERFTQCSKELEKLLQEDRLSGAPLLLLANKCDLPAPYPAYDLSHVLDIPRIREERSC
                     QIFNCSAISGELLVQAMTWLCDEIM"
     assembly_gap    105905..107092
                     /estimated_length=1188
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    109537..109546
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             complement(join(112134..112268,112314..112444,
                     112495..112783))
                     /gene="Cbr-evl-20.1"
                     /locus_tag="CBG_00634"
                     /standard_name="CBG00634"
                     /product="Protein CBR-EVL-20.1"
                     /note="C. briggsae CBR-EVL-20.1 protein; contains
                     similarity to Pfam domains PF00071 (Ras family) , PF09439
                     (Signal recognition particle receptor beta subunit) ,
                     PF00009 (Elongation factor Tu GTP binding domain) ,
                     PF04670 (Gtr1/RagA G protein conserved region) , PF00025
                     (ADP-ribosylation factor family) , PF08477 (Miro-like
                     protein) , PF00503 (G-protein alpha subunit) contains
                     similarity to Interpro domains IPR006687 (Small GTPase
                     superfamily, SAR1-type), IPR000795 (Protein synthesis
                     factor, GTP-binding), IPR013684 (Mitochondrial Rho-like),
                     IPR005225 (Small GTP-binding protein domain), IPR001806
                     (Small GTPase superfamily), IPR003579 (Small GTPase
                     superfamily, Rab type), IPR001019 (Guanine nucleotide
                     binding protein (G-protein), alpha subunit), IPR019009
                     (Signal recognition particle receptor, beta subunit),
                     IPR006689 (Small GTPase superfamily, ARF/SAR type),
                     IPR006762 (Gtr1/RagA G protein), IPR024156 (Small GTPase
                     superfamily, ARF type)"
                     /note="Predicted"
                     /db_xref="GOA:Q627K4"
                     /db_xref="InterPro:IPR005225"
                     /db_xref="InterPro:IPR006689"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="UniProtKB/Swiss-Prot:Q627K4"
                     /protein_id="CAP22001.1"
                     /translation="MGFLKILRKQRAREREMRILILGLDNAGKTTLMKKFLDEPTDTI
                     EPTLGFDIKTVHFKDFQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLTQC
                     SEELKKLLQEERLSGASLLVLANKSDLPGAIDVNSIAQVLELQSIKTHHWKIFSCCAL
                     SGERLVQAMTWLCDDVGSRIFILD"
     CDS             complement(join(113015..113270,113325..113704,
                     113753..113832,113879..113931,113984..114000))
                     /gene="Cbr-eif-3.G.1"
                     /locus_tag="CBG_00635"
                     /standard_name="CBG00635"
                     /product="Protein CBR-EIF-3.G.1"
                     /note="C. briggsae CBR-EIF-3.G.1 protein; contains
                     similarity to Pfam domains PF12353 (Eukaryotic translation
                     initiation factor 3 subunit G) , PF00076 (RNA recognition
                     motif. (a.k.a. RRM, RBD, or RNP domain)) contains
                     similarity to Interpro domains IPR024675 (Eukaryotic
                     translation initiation factor 3 subunit G, N-terminal),
                     IPR017334 (Translation initiation factor 3, subunit G),
                     IPR000504 (RNA recognition motif domain)"
                     /note="Predicted"
                     /db_xref="GOA:A8WLV5"
                     /db_xref="InterPro:IPR000504"
                     /db_xref="InterPro:IPR012677"
                     /db_xref="InterPro:IPR017334"
                     /db_xref="InterPro:IPR024675"
                     /db_xref="InterPro:IPR034240"
                     /db_xref="InterPro:IPR035979"
                     /db_xref="UniProtKB/Swiss-Prot:A8WLV5"
                     /protein_id="CAP22000.2"
                     /translation="MTGINLITSAPEVNSWAEAVEQDSAPHIQEGADGIRTETAFTEV
                     DGVRYKVVTQFKVINKRVPKVVADRKKWVKFGSCKGEPAGPQVATTYVAEEVEMQFTR
                     NRAGEQILDVQEDKQAAKTTSREHCRHCKGNDHWSTHCPYKVMYQLDEEADANQDADS
                     KNALGLRGDGRQMERNRSDENTCRVTNLPQEMNEDELRDVFGRIGRVIRIFIARDKIT
                     GLPKGFAFVTFESRDDAARAIAELNDIRMYHMVLKVEWTRPSN"
     CDS             join(115290..115310,115594..115613,115713..115824)
                     /gene="CBG25504"
                     /locus_tag="CBG_25504"
                     /standard_name="CBG25504"
                     /product="Protein CBG25504"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:B6IEP4"
                     /protein_id="CAR98374.1"
                     /translation="MNLLIHKIKSGFWIFDNPIDCRTTEDPFCDPFAEPANNKNRNDG
                     LPTLSF"
     CDS             complement(join(116365..116557,116602..116891,
                     119111..119291,120269..120444))
                     /gene="Cbr-lips-10"
                     /locus_tag="CBG_00637"
                     /standard_name="CBG00637"
                     /product="Protein CBR-LIPS-10"
                     /note="C. briggsae CBR-LIPS-10 protein; contains
                     similarity to Pfam domain PF01674 Lipase (class 2)
                     contains similarity to Interpro domain IPR002918 (Lipase,
                     class 2)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNE5"
                     /db_xref="InterPro:IPR002918"
                     /db_xref="InterPro:IPR029058"
                     /db_xref="UniProtKB/TrEMBL:A8WNE5"
                     /protein_id="CAP21999.1"
                     /translation="MHLRSLVLLVAILGSAHAKFHSHFYNFLLGKFGKPIADDLLRPD
                     LGTKGSFGGGNPNATGLPIVVIHGLAGYAGLSKKSLLNKYYSYGQPKGTVFATTYARG
                     KLMDSLQHGMQCDYVLKVRTLILAVHEYTQKQVNIIACSMGSPITRKAILGGHCVDSG
                     VNLGRSINHLIHNYVSVAGANHGAIMCARQPFLNGICSPTHGLDCRSKFIQEINSQPF
                     QYGKNMFAIYSVADEVVGLRNTCGEMASPLEGATPIVKTRLLHGAVIGGTTEDQWRCL
                     QTP"
     CDS             join(121576..121649,123645..123828,123872..123961,
                     125274..125492,125536..125628,125674..125834,
                     125884..125944,126357..126599,126727..126846)
                     /gene="CBG00638"
                     /locus_tag="CBG_00638"
                     /standard_name="CBG00638"
                     /product="Protein CBG00638"
                     /note="contains similarity to Pfam domain PF00328
                     Histidine phosphatase superfamily (branch 2) contains
                     similarity to Interpro domain IPR000560 (Histidine
                     phosphatase superfamily, clade-2)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNE4"
                     /db_xref="InterPro:IPR000560"
                     /db_xref="InterPro:IPR029033"
                     /db_xref="InterPro:IPR033379"
                     /db_xref="UniProtKB/TrEMBL:A8WNE4"
                     /protein_id="CAP21998.2"
                     /translation="MLKFSNFNISIFTDFQFPTIPKVPVILGIAAISSLAVVGLILYF
                     TLPTSSEPAPKFEALVGGNKSTTPGPSTEDPNKPPKLIFAQALFRHGARAPDKGYPPE
                     VAKYFPRGRGQLTDMKWFSRRMDRVLSTASTVGAAMFRNPKQKYTSVAIQTENDRDNF
                     LLNFPIPCKVKTDYRNKTCPDLLRKDNKEDKYTTALKCLGPWPSIFNKFNVTDSDMYI
                     NMVRNGVPVSQEVRDNYAEISKEFMKVRNYLNGLYSREYIQVKFGVLVDKILRDMETA
                     WERYQRKIHKRKFRVYSTQDWVMSGILSAFGVHEHILAHGPQEEPNYNTLILVELWKK
                     NGIPYVKFLYKPEEETQLDHKLMDLTGVIPGCDGKKKCSLKRFNNCCDNTRASKRTQK
                     KLCAFPKPVTTNSSTMITHNSR"
     assembly_gap    124741..124803
                     /estimated_length=63
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             complement(join(127454..127514,127643..127734))
                     /gene="CBG00639"
                     /locus_tag="CBG_00639"
                     /standard_name="CBG00639"
                     /product="Protein CBG00639"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:G2J6A2"
                     /protein_id="CAP21997.1"
                     /translation="MAEKEGEEDYWSKLPWELKEEIVGYLPFFYKDYGSFFCIRLTFL
                     RFTKQK"
     CDS             join(129745..129867,129911..130050,130621..130774,
                     130821..131386,131432..131581,131631..131907)
                     /gene="CBG00640"
                     /locus_tag="CBG_00640"
                     /standard_name="CBG00640"
                     /product="Protein CBG00640"
                     /note="contains similarity to Pfam domains PF07690 (Major
                     Facilitator Superfamily) , PF00083 (Sugar (and other)
                     transporter) contains similarity to Interpro domains
                     IPR011701 (Major facilitator superfamily), IPR005829
                     (Sugar transporter, conserved site), IPR005828 (General
                     substrate transporter)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNE2"
                     /db_xref="InterPro:IPR005828"
                     /db_xref="InterPro:IPR005829"
                     /db_xref="InterPro:IPR020846"
                     /db_xref="InterPro:IPR036259"
                     /db_xref="UniProtKB/TrEMBL:A8WNE2"
                     /protein_id="CAP21996.2"
                     /translation="MSESKFWKIKQLFIFILVALAANFNYGFSTTYINTSVDQFKNFL
                     NTSLSHRHVVMTETKYDIIWNLFLNCWFVGYFVGVWFSPIFNDNWLPYRKLDSISSVN
                     PSMSSNSMVLPRTIDSIQIYHFHMHGCHIPILYTVLAECSPTHLRGSFSFLSEVSYSS
                     MTMVGSFLGQDYILGSHLFWLCFFVVPFCLFFTLALFLLPETPKFLLISKDSEEQATE
                     SVKYYHGVDSDAKQVLEEIRKEAECENDPLEDSTTFRKMKELFTEPHLRMALILSVSA
                     LTNTVGLWALLLSSTFFLENANVESEVAEWSTTAMSLAYVSGTVTGGIIIEKVGRRTL
                     LLLFTFLNNLALLAFVFFAKIRILIDPMKYGCLGALIIYGYTYGTGVGPISWFISSEL
                     VPQKHRSIAQSVAYAINTLMVVISTFTVLPLYSVIGSYAFVILYSIPSFISMLILFRY
                     LPETKRREIHDIVNELKNK"
     CDS             join(134626..134748,134791..134839,134994..135148,
                     135948..136513,136558..136707,136759..137035)
                     /gene="CBG00642"
                     /locus_tag="CBG_00642"
                     /standard_name="CBG00642"
                     /product="Protein CBG00642"
                     /note="contains similarity to Pfam domains PF07690 (Major
                     Facilitator Superfamily) , PF00083 (Sugar (and other)
                     transporter) contains similarity to Interpro domains
                     IPR011701 (Major facilitator superfamily), IPR005829
                     (Sugar transporter, conserved site), IPR005828 (General
                     substrate transporter)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNE1"
                     /db_xref="InterPro:IPR005828"
                     /db_xref="InterPro:IPR005829"
                     /db_xref="InterPro:IPR020846"
                     /db_xref="InterPro:IPR036259"
                     /db_xref="UniProtKB/TrEMBL:A8WNE1"
                     /protein_id="CAP21995.2"
                     /translation="MANFPFWRIKQLLIFLLIALAANFNYGFSSTYLNTSVDEFKIFL
                     NSSYSRRGQVLTEIAFLVGNFFAFLASILQCLAILWYCPELLIASRFITSICMAISYQ
                     SCILFLQECSPTNLRGSFSFLSEVSYSSMTMVGSFLGQEYILGLHLFWLCFFPVPFCL
                     LFTLTLFLLPETPKFLLISKDFEEKAMKSVEYYHGVDSDAKQVLEDIRIEANCESSDS
                     ESSTTFQKLKDLFIEPHLRRALILSIAALANTIGLWTMLLSSTTFLEDANVESHIAEW
                     SSTAMSLAYVFGTITGGFVIERFGRRKLLLTFTLLNNLALLAFIFFAKIHNIIDPLKY
                     GCIGALIAYGYTYGTGVGPISWFISSELVPQKHRSIAQSVAGATDTIMVTVSTLAVLP
                     LYDVIGSYGFLILYSIPSSISMIFLFRYLPETKGREIHDIVNELKNK"
     CDS             complement(join(137104..137187,137640..137914,
                     138227..138767,138812..139017,139062..139125))
                     /gene="CBG25503"
                     /locus_tag="CBG_25503"
                     /standard_name="CBG25503"
                     /product="Protein CBG25503"
                     /note="contains similarity to Interpro domains IPR001841
                     (Zinc finger, RING-type), IPR017907 (Zinc finger,
                     RING-type, conserved site)"
                     /note="Predicted"
                     /db_xref="InterPro:IPR001841"
                     /db_xref="InterPro:IPR013083"
                     /db_xref="InterPro:IPR017907"
                     /db_xref="UniProtKB/TrEMBL:B6IEP3"
                     /protein_id="CAR98373.1"
                     /translation="MIHLESLVCLACKTYNNVNLFDNDARRPFVGTCGHSICLICANS
                     NRNQNCPVCKKEGAFKYGAVNYSSSSIMGNFDYDIFQVIRKWWMSYETGTGVCSKCSA
                     HKLLRVCETCKLKEAIKDRDLSKYSICESCSKSIRFYGGKFENLRNFMDLKIPLECHV
                     CHTQVENPFFDNFQFQWDTEHLNLADFNFCSDCILDNHQDHVTSKILIYETTYFSVFP
                     EKRKEATIPLLGMLLKKKLFEADENIKCKLRYMRMMRICEKMITTFYFVNSIGSRRRS
                     NENFKKLVSNMEKQYNEHQQLKSPCPCLKVWKDLESIVNILEENPSFCRMVENVGVLE
                     VRNECPLEFESNRVEKEQLMELIRRGVKVEEPQRLQIGDDFDSFGLTPQSSNIKK"
     CDS             complement(join(140299..140497,140591..140795,
                     140840..140907,140952..141278,142269..142330))
                     /gene="CBG00643"
                     /locus_tag="CBG_00643"
                     /standard_name="CBG00643"
                     /product="Protein CBG00643"
                     /note="contains similarity to Pfam domain PF04116 Fatty
                     acid hydroxylase superfamily contains similarity to
                     Interpro domain IPR006694 (Fatty acid hydroxylase)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNE0"
                     /db_xref="InterPro:IPR006694"
                     /db_xref="UniProtKB/TrEMBL:A8WNE0"
                     /protein_id="CAP21994.1"
                     /translation="MLQSWYTTVYNYFEGDEYMLYVVAGNAVAGISFWLYNLFFIIID
                     VTDPKWVQPYKIQEEKKPTLSKYWSILKVIGPNQLIVTPIVTSIWFYIAKWWGMDFGP
                     EIPSVWVLLMNWVLCMAMDEIAFYYSHRLLHHPKLYRHIHKKHHEWTAPVSIASIYAH
                     PLEHAISNLSPIALGAVLFRCHVVSYWIFTSYAILTTTFHHSGYHFPFMLSAEHHDFH
                     HKVFNECYGFGPLDWFHGTDKQFRKSIEHPRDYVYYGLTPVKQLIPDVNNNDDENVKM
                     EDIVQRNKII"
     CDS             complement(join(145442..145592,145909..145963,
                     146048..146197,146244..146311,146355..146454,
                     146512..146738,146787..146845))
                     /gene="CBG00644"
                     /locus_tag="CBG_00644"
                     /standard_name="CBG00644"
                     /product="Protein CBG00644"
                     /note="contains similarity to Pfam domain PF04116 Fatty
                     acid hydroxylase superfamily contains similarity to
                     Interpro domain IPR006694 (Fatty acid hydroxylase)"
                     /note="Predicted"
                     /db_xref="GOA:A8WND9"
                     /db_xref="InterPro:IPR006694"
                     /db_xref="UniProtKB/TrEMBL:A8WND9"
                     /protein_id="CAP21993.1"
                     /translation="MESAYQKVYDYFGGDPLLIYVIGGTVIVNINFWLFNLFFILIDM
                     IDPNWVQPYKIQDEKKPPLSKYLGAFKVILTNQFISGPLITICWYFPAVWFGARFTGP
                     MPSVLEILRDIFVSILCEEIGFYYTHRLFHHPRIYKYIHKKHHEWTAPVSITSIYCHP
                     LEHAISNLSPVLLGPTICGSHVVTLWIWASLAILSTTCSHSGYHFPFMFSPEPHDYHH
                     KVFNECFGTGLLDWIHGTDTTFRKSVEGKRNYMSWSLKPIKQIHPDDEKQE"
     CDS             complement(join(154761..154932,155821..155902,
                     156141..156252,157025..157125,157171..157333,
                     157436..157648,158615..158845))
                     /gene="CBG00645"
                     /locus_tag="CBG_00645"
                     /standard_name="CBG00645"
                     /product="Protein CBG00645"
                     /note="contains similarity to Pfam domain PF10277
                     Frag1/DRAM/Sfk1 family contains similarity to Interpro
                     domain IPR019402 (Frag1/DRAM/Sfk1)"
                     /note="Predicted"
                     /db_xref="GOA:A8WND8"
                     /db_xref="InterPro:IPR039545"
                     /db_xref="UniProtKB/TrEMBL:A8WND8"
                     /protein_id="CAP21992.1"
                     /translation="MTRRCGKMDPQDSWEWAHATHRISTIYVYFFISSMIFVAVSLYF
                     FSKEFVVSPDNFSELVHSYRSDYTNKTVVGYDEVIAAMNPFHPFHKFLARNHIRHSFG
                     TVFNNHCYVFPHPNGTNLPSILRRMTFSAPAQASMRTAVLITVLLRMVIVLIRTSDVM
                     LQNPAKFIKIKVIGCVCTITDLCVSVFGMFVTCLHTSVDINDLSFLVYYSLPLFGASF
                     FICATSYTYLESYDIHRKSSRVLERAFCIALFALCLPIVCKDYISFLFSKPCLYHAEL
                     LPALCEYICIVTIIVFYMTQIEDFGEMQMVLSCEREETMCCMDFIDIPEFKPAMLHDF
                     HELIQHQREQEKKRLHKSIIFVS"
     CDS             complement(join(164515..164713,164759..164826,
                     165708..165979,166424..166552,167199..167391))
                     /gene="CBG00646"
                     /locus_tag="CBG_00646"
                     /standard_name="CBG00646"
                     /product="Protein CBG00646"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WND7"
                     /protein_id="CAP21991.1"
                     /translation="MLPPPKRQPPFPKTPPSLRATSSRYRVHSAPPTSEGRIPSRLPP
                     IVKNRSQERNLYMDKPSTPDPDQVRRVLEQRIAQALSGPSSQLKQQMSSDEKPTTSFA
                     GRKRSLIRSAAIGSEEMHLVPIDDEELAMLRSINRSNYSKSGSREGGCSRMESSFTSD
                     ALYKHEYEDKSSDEEIDLTVGEQLRSRRKLSMIRQEEQEELNGSIDAMSIGSRRESGI
                     RNQEDRLTGMRHEKMRSSTKSGDMGDDQISGLVYDKEFDCYYNPNTDRYYRLKSQSKS
                     GEGLLLQEEV"
     CDS             complement(join(169512..169753,170067..170265,
                     170585..170659,170706..170735,170896..170898))
                     /gene="CBG00647"
                     /locus_tag="CBG_00647"
                     /standard_name="CBG00647"
                     /product="Protein CBG00647"
                     /note="Predicted"
                     /db_xref="GOA:A8WND6"
                     /db_xref="UniProtKB/TrEMBL:A8WND6"
                     /protein_id="CAP21990.2"
                     /translation="MLSISVASFLQHVYSFYKHKKIFECHSDIPNNSSLETHFLAHDI
                     IIFDFGLMHRVLGTNECVANYLDGGYMRFAWTIEQSTALFISLVALMFFKKPLWLYWP
                     GLLMQSSYTLGLSVLTMATAPKILEALGGVIDFELALIFSVYSMGFAMNWLFTFVLWH
                     YYWHRERKLLAERGIFPPPEFV"
     CDS             complement(join(173760..173816,174050..174352,
                     174785..174916))
                     /gene="Cbr-dod-23"
                     /locus_tag="CBG_00648"
                     /standard_name="CBG00648"
                     /product="Protein CBR-DOD-23"
                     /note="C. briggsae CBR-DOD-23 protein ;"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WND5"
                     /protein_id="CAP21989.1"
                     /translation="MSLIGKIALVVVVILAIQYAEASVHHRHHKNGDRYDDRIILRSG
                     ENAPNYHLHGHITCNGNGVRYARPYLHSPLFPKLIINLYATGADGEYRLSTGTIYDLR
                     GSLELMVRHTCRIEGLPPSSNCAVPYYTTNIPIDISSGKIMMEKEIELFDMKQYSTAD
                     CLY"
     CDS             complement(join(177068..177170,177965..178239,
                     178489..178546,178955..179080,179876..180061,
                     180223..180387,180501..180625,180669..180731,
                     180782..180890,180941..181044,181306..181415,
                     181568..181801,181987..182140,182187..182302,
                     182662..182710))
                     /gene="CBG00649"
                     /locus_tag="CBG_00649"
                     /standard_name="CBG00649"
                     /product="Protein CBG00649"
                     /note="contains similarity to Pfam domains PF01549 (ShK
                     domain-like) , PF03098 (Animal haem peroxidase) contains
                     similarity to Interpro domains IPR019791 (Haem peroxidase,
                     animal, subgroup), IPR005829 (Sugar transporter, conserved
                     site), IPR002007 (Haem peroxidase, animal), IPR003582
                     (Metridin-like ShK toxin)"
                     /note="Predicted"
                     /db_xref="GOA:A8WND4"
                     /db_xref="InterPro:IPR003582"
                     /db_xref="InterPro:IPR010255"
                     /db_xref="InterPro:IPR019791"
                     /db_xref="InterPro:IPR037120"
                     /db_xref="UniProtKB/TrEMBL:A8WND4"
                     /protein_id="CAP21988.1"
                     /translation="MKSLLVSLLLVYVVHLAQSQHACVDRHIHCVFWSQAGECEVNPR
                     FMKRQCMKACGTCPRSNATLHAEPAMMSKSRSFDEVPDDVSQRAFLPNRGIPEGCHSV
                     MTVEAETRQIFSSGQLTARFRQQMCAEQQIAPDCSINNCFHKKYRSMDGTCNNLQNPI
                     KGAAFTAFSRLMPAAYDDGFNTLVSASQRNRPNPREVSVFLLSSERSLPGHVNSLVML
                     FGQFVSHDITSNAAQNFCGCGNSGPMCASIFAPPSDRSRRCIPFTRSFPVCGTGQFGR
                     VREQLNMNTAAIDASLIYGSEAITARSLRFAAMLRTSMIGGRMFPPNTNAGSLTAGDG
                     RAILFVGLAALHTSFLRLHNNVAARLQNMNRHWNADRIFQESRKIVGGVVQAITYQEF
                     VPELIGDASKTILGAYTGYNPNVDLGILNEFAAGAYRLHGMIQETYPLVDSQFREFNR
                     YRFIDGVNNINHVLTNIDSIYRGMMKVPVRSPQRLTTSVTERLFGGSVDMAAVNIQRG
                     RDHGLRSYNEYRRFCNLRPITSFDDWPEVPDQNVRQRIAQLYRTPDDVDFYVGGILEQ
                     PAAGSVVGATFACVIGKQFERLRDGDRFYFENPGVFTSSQLAELKRTTLSWVLCQTGD
                     NMLRVGRRAFDIEDGSRAVPCSSINGLNLEAWRE"
     CDS             complement(join(184622..184747,184798..184984,
                     185035..185243,185301..185357))
                     /gene="CBG00650"
                     /locus_tag="CBG_00650"
                     /standard_name="CBG00650"
                     /product="Protein CBG00650"
                     /note="contains similarity to Pfam domain PF00635 MSP
                     (Major sperm protein) domain contains similarity to
                     Interpro domain IPR000535 (Major sperm protein)"
                     /note="Predicted"
                     /db_xref="GOA:A8WND3"
                     /db_xref="InterPro:IPR000535"
                     /db_xref="InterPro:IPR008962"
                     /db_xref="InterPro:IPR013783"
                     /db_xref="InterPro:IPR016763"
                     /db_xref="UniProtKB/TrEMBL:A8WND3"
                     /protein_id="CAP21987.1"
                     /translation="MLSNRPITLRNLRFNPLDSVTFRMEPRRQKVPYEIQNDEDVDII
                     VKWKSTRARTFNTQPNYAIIRSKTKMTFQLVFKGMERGGNTPADRFTAVISAIKPTDQ
                     PAKQIWKLHELRSELLIGLKHKKFVFVIFEGVNEPEWWNRSVLGEDEPILPNFGIDKD
                     DEEDAELQNNAMRAGAYQHVNLQLDPPGDPNQ"
     CDS             join(185706..185756,186608..186703,186864..187193)
                     /gene="Cbr-ubc-24"
                     /locus_tag="CBG_00651"
                     /standard_name="CBG00651"
                     /product="Protein CBR-UBC-24"
                     /note="C. briggsae CBR-UBC-24 protein; contains similarity
                     to Pfam domain PF00179 Ubiquitin-conjugating enzyme
                     contains similarity to Interpro domain IPR000608
                     (Ubiquitin-conjugating enzyme, E2)"
                     /note="Predicted"
                     /db_xref="GOA:A8WND2"
                     /db_xref="InterPro:IPR000608"
                     /db_xref="InterPro:IPR016135"
                     /db_xref="UniProtKB/TrEMBL:A8WND2"
                     /protein_id="CAP21986.1"
                     /translation="MHAAAHGRIVQLSRIRKEIADLTKNKRCYIKDFRKIQKCKDVFQ
                     FKILGDTSLFKDLIFTLDLDVSLDYPFKPPFLKFCHPVYHPNIDPVTHEICSPMLLQE
                     NWKPGTTIEDVLLNVIVLLNEPDISRPVNFEAAADYINDKAIYMAKFNEVVKKWTV"
     CDS             complement(join(187338..187532,187595..187690,
                     187745..187804,188670..188753))
                     /gene="CBG00652"
                     /locus_tag="CBG_00652"
                     /standard_name="CBG00652"
                     /product="Protein CBG00652"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WND1"
                     /protein_id="CAP21985.1"
                     /translation="MIRNIAIASIVLCAFVNTQRTPSTEVIDKILGSAETKTIEQINK
                     EIDRLVEKLDDKTRAEHKAWKLKVEKDERERKSRIFKVLPKLSTRTQQKLIRIVMTQQ
                     NQTLSVGEKERILKHISTSMDNNTKNELARFLTDKDLFSLIY"
     CDS             join(190233..190277,190324..190417,190465..190567,
                     190610..190922,190967..191053,191100..191309,
                     191694..191795,191836..191999,192047..192162,
                     192456..192613,192657..193408,193851..194073,
                     194121..194537,194583..195050,195107..195192,
                     195536..195613,195661..195950,195961..196163,
                     196210..196401)
                     /gene="CBG00653"
                     /locus_tag="CBG_00653"
                     /standard_name="CBG00653"
                     /product="Protein CBG00653"
                     /note="contains similarity to Pfam domains PF01498
                     (Transposase) , PF00027 (Cyclic nucleotide-binding domain)
                     , PF01734 (Patatin-like phospholipase) contains similarity
                     to Interpro domains IPR002641 (Patatin/Phospholipase
                     A2-related), IPR000595 (Cyclic nucleotide-binding domain),
                     IPR002492 (Transposase, Tc1-like), IPR001423
                     (Lysophospholipase patatin, conserved site)"
                     /note="Predicted"
                     /db_xref="GOA:A8WND0"
                     /db_xref="InterPro:IPR000595"
                     /db_xref="InterPro:IPR001423"
                     /db_xref="InterPro:IPR002492"
                     /db_xref="InterPro:IPR002641"
                     /db_xref="InterPro:IPR009057"
                     /db_xref="InterPro:IPR014710"
                     /db_xref="InterPro:IPR016035"
                     /db_xref="InterPro:IPR018490"
                     /db_xref="InterPro:IPR038717"
                     /db_xref="UniProtKB/TrEMBL:A8WND0"
                     /protein_id="CAP21984.2"
                     /translation="MLHYLLSIALFIFENKLELFVSGLLAIVVYFLWPAQEEKDDVMN
                     WKSVPNSPVHNSPETIVEPPIGKSPSSYSSPMKRGLWSLSKEDTTPDKVRGSWEKLTK
                     QPPRELYEPADQEQVPSNIKPEIFFVLKALEGLELPRTWQLDPRDVDTLSIDSGNVLL
                     APGDPNDVIVVVISGELGIFTTVNSADKHYECNMKTLKSGESYFSQTSIIEILMNEQP
                     KNKYIHLKALTNCRVAKYKLTSFYTCFLSSPQQWIRTIQVVMTRLQQCTLITCNMYLG
                     IGGKCIDAVKKFECQTGTVVTEENSFEIDMIFVAFGRLRLKRGSLELDDTGTSLAFDV
                     HPGDILPSMQILTNEPAMCTAKAVEKTIYFKICREEYIQFLFEFPVIYLRLAFRALHF
                     VSPFARVFDLAVSWHRIETDMVRPFGKKSFSVDERKSIVRGHELGAHPKILATQFSCS
                     SSQIYRILKKNRDDNGVVHRQSPGRPRTTSRNMDRNILRACREDPRRTSTDIQLSVTS
                     PNEPAPSRRTIRRRLQVAGLHGRRPVKKPLVSLKNRKARVEWAKQHLSWGPREWANHI
                     WSDESKFNMFGTDGIQWIRRPIGSRYAPQYQCPTVKHGGGSVMVWGCFSDTSMGPLKR
                     IVGTMDRYVYEDILENTMRPWARANLGRSWVFQQDNDPKHTSGHVANWFRRRRVNLLE
                     WPSQSPDLNPIEHMWEELERRLKGVRASNANQKHGDKSDCMYIVMGGRLRAVDYTKII
                     EEYGRLDLIGITDMAEKRARRNTVMAVRFSHIVCIPDNLLSFVKIRYPQVGNKLLQLI
                     SKCWKTPSPEAMSHVETTKIQNLRTIAIVPASKRVPLTAFTCELYNHLSKHVKSLRLS
                     STVIGNYFEPEVIPKKADFGLMHWLNVQEIAYSLVLYQCDFNRTSWTRRCLRMADAIL
                     VVAIGNESRDQQVLADSLLSCNEKGVRQSKELVILWPENTPTPRGTADWLRESYYSGY
                     HHLRAPNRVFSFPVKTQERKIVDYYESSVLCEINYQSDFSRLARILTGNAIGVVFGGG
                     GARGAAHAGALKAIIEKKIPIDMVGGTSIGALFGSLYATTPDIRAVGRMKNFFTDRLR
                     NNILDVLRDLTWAYCAILTGHRFNLCVQRMLDEVKIEDCWISFFCISTDLTTSSMRIH
                     RSGLMWPVVRSSMSIAGYVPPICDPQDGHLLLDGAYVNNLPADIMKSLGASVVIAIDV
                     GMSDENENLRNYGYSISGVWFFFEISKFSNSRTWCLFKRWWPFGEELRVLNMSEIQNR
                     LAYVCSANQMETVKNAPYCYYVKLPIESFGIFDFSKFDQAAQIGYDVTSQKMEEYFED
                     SMITRRKLLGCARNVGLTPQKSKNDNLLSFVNMPCLPRTFNDVKSD"
     CDS             complement(join(200538..200774,201111..201206))
                     /gene="CBG00656"
                     /locus_tag="CBG_00656"
                     /standard_name="CBG00656"
                     /product="Protein CBG00656"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WNC9"
                     /protein_id="CAP21983.1"
                     /translation="MIQNERYKIKRRSQKEKEKKKTLRGFVFYSEGNLRFQAPVFRIP
                     GFRIPGFPDSQISGFQDSRIPGFQDSRIPGFQDSRIPGFQDSRIPGFQDFRIPGFQNS
                     RIPGFRRF"
     CDS             join(201284..201340,201388..201445,201497..201637,
                     202579..202691)
                     /gene="Cbr-nlp-5"
                     /locus_tag="CBG_00657"
                     /standard_name="CBG00657"
                     /product="Protein CBR-NLP-5"
                     /note="C. briggsae CBR-NLP-5 protein ;"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WNC8"
                     /protein_id="CAP21982.1"
                     /translation="MLIKIMVLMGIISCASAFTISTVRFKGTPNRVLENIHRELAKRS
                     YSQLNQYAGFDTLGGMGFGKRSEPDQAGEKRAALGTFDSIGGMGLGKRSAPSVFLYEK
                     RAPLQMTSLDTLGGMGFGKK"
     CDS             join(204391..204737,204786..204951)
                     /gene="CBG00658"
                     /locus_tag="CBG_00658"
                     /standard_name="CBG00658"
                     /product="Protein CBG00658"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WNC7"
                     /protein_id="CAP21981.1"
                     /translation="MRSIKLTAKSTTESFNPESKLYQAQSIEIFPSDHTFPAFLRHFK
                     GKQAFISCLTCDVLDLIEFVKKWKPGEAFRALEYLKIGVYEGRIPQNQVMQEIGAKAI
                     DATKQPAAYTLRKLYDWEDLGPNTDPIISHSYVVRESDNRVASVLIEEDTLSFGVWDK
                     TEEEFSRMMD"
     CDS             join(209682..209821,210090..210240,210286..210515,
                     210960..211117,211158..211285,211343..211484,
                     211677..211813)
                     /gene="CBG00660"
                     /locus_tag="CBG_00660"
                     /standard_name="CBG00660"
                     /product="Protein CBG00660"
                     /note="Predicted"
                     /db_xref="GOA:E3CTV4"
                     /db_xref="InterPro:IPR029675"
                     /db_xref="UniProtKB/TrEMBL:E3CTV4"
                     /protein_id="CBX32990.1"
                     /translation="MAWNNIFVSIVWQLFWASILYFVLEFGISVVRGAVPKIGHDERL
                     FPRNIINNNDALNRHRVKIADGILQNLPQITQKSKNLEIRIVASNRGNDFLYQTVLFV
                     LEQQSATFNYSLSICNVESEIFPDLRRFDKLKIPIKTIGEKSGEVSKNHLNSTIGKEN
                     QDYWKCLGLPTESRYILLIEDDAVVIPEFSKLLFSLVKMLDIHEYVDFAKLYHPNYLR
                     KLPSYIMANGFRLYHYILLFLLLHCQILQNIPNFYIPHPLDFPFLESHILRFPADFRY
                     YLTGSAYISYPESCCTPAVIFRQSSVKRMHEYFVRSQAFSGHAKDHILDESPFTGRQS
                     DVNYVTHIGSFSSVRQRAVYLSDLREN"
     CDS             complement(join(214619..214886,214937..215343,
                     215388..215645,215946..216268,216313..216418))
                     /gene="Cbr-puf-5"
                     /locus_tag="CBG_00661"
                     /standard_name="CBG00661"
                     /product="Protein CBR-PUF-5"
                     /note="C. briggsae CBR-PUF-5 protein; contains similarity
                     to Interpro domain IPR001313 (Pumilio RNA-binding repeat)"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:A8WNC5"
                     /db_xref="InterPro:IPR001313"
                     /db_xref="InterPro:IPR011989"
                     /db_xref="InterPro:IPR016024"
                     /db_xref="InterPro:IPR033133"
                     /db_xref="UniProtKB/TrEMBL:A8WNC5"
                     /protein_id="CAP21979.2"
                     /translation="MSETSGRSNSKLSDSSSVSEQQTADLSIFSGSFDGGVFSSNIPM
                     FNFAGQGSQSALYSPHPFVKSNDPCRLTALTQSTPKEPMNLTPADFGLADFSVGSESF
                     ADFSANNSSFVGNFQSNVRSTRLLPAWAVDASGNIRDDLTLLSIQKFDESNAMKLVEK
                     ISNLDFLPLCTDQCAIHVLQKVVKILPVSAWSFFVKFLCRDDNLMTVCQDKYGCRLVQ
                     QTIDKLSDNPKSPCFNTRLQLLHGLMTSVARNCFRLSSNEFANYVVQYVIKSSGVMEM
                     YRDTIIEKCLLRNILSMSQDKYASHVIEGAFLFAPPHLLSEMMEEIFDGYVKDQETNR
                     DALDILLFHQYGNYVIQQMISICISALLGKEERKMLPTEMRLYAKWFDRIKNRVNRHS
                     SRLERFSSGKKIIESLQKLSVPMTMTNEPMPLWAVPTPLMDITAQFLNRQNFQKQHSV
                     FDD"
     CDS             complement(216618..216800)
                     /gene="CBG25502"
                     /locus_tag="CBG_25502"
                     /standard_name="CBG25502"
                     /product="Protein CBG25502"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:B6IEP2"
                     /protein_id="CAR98372.1"
                     /translation="MKCTVDFQVMSENNTHSSRTQLRKNAHKNKVRCAGHIANPTPNY
                     CTESAKLTILNFLSSF"
     CDS             join(217655..217868,217916..218010,218057..218267,
                     218574..218647,218695..218788,218833..218882,
                     218932..219099)
                     /gene="CBG00662"
                     /locus_tag="CBG_00662"
                     /standard_name="CBG00662"
                     /product="Protein CBG00662"
                     /note="contains similarity to Interpro domain IPR013090
                     (Phospholipase A2, active site)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNC4"
                     /db_xref="InterPro:IPR036444"
                     /db_xref="UniProtKB/TrEMBL:A8WNC4"
                     /protein_id="CAP21978.1"
                     /translation="MSFTLLLLVFSIPMFSGLELRTKRSVAPFLGSGGSTSNAMLIPY
                     NNWHCGSEGISRNFSYGVVQKDCPTLAAALNHCCAIHDDCYGRQDGQEKCDEEFCECN
                     RMVTRLPTEEGYKCRAAMNDACRILRIVGMFAYGSSDYTDPTKPAGNEELVPQTVPSI
                     DYDHLYSNCPHVNITLASCSLNFDLCTSVHSIDFCANDLCHCMMDAAESDKLHQHCLP
                     AVAHSCRGILNYSSKVLAERKSAKIFMILALVVVAVVSIGFGVYYMYSKSNNERNKTT
                     DEGKYLQIHTVESARSVNPLLTNAD"
     CDS             join(220231..220326,220767..220799,221659..221774,
                     223065..223194)
                     /gene="CBG00663"
                     /locus_tag="CBG_00663"
                     /standard_name="CBG00663"
                     /product="Protein CBG00663"
                     /note="contains similarity to Pfam domain PF00090
                     Thrombospondin type 1 domain contains similarity to
                     Interpro domain IPR000884 (Thrombospondin, type 1 repeat)"
                     /note="Predicted"
                     /db_xref="InterPro:IPR000884"
                     /db_xref="InterPro:IPR036383"
                     /db_xref="UniProtKB/TrEMBL:A8WNC3"
                     /protein_id="CAP21977.1"
                     /translation="MNAFWLSALCCIVIVSGVHGQTANIIEIPIPTNAPQASTSCTTA
                     TWLVWSDWSTCSDECGSCGVQMRTRTCLTTDSSCTCPGGATGVQYCNLDICRYPRTTC
                     CNNFRVTSYLGRFACLNATIIL"
     CDS             complement(join(223483..223635,224221..224581,
                     224879..224985))
                     /gene="CBG00664"
                     /locus_tag="CBG_00664"
                     /standard_name="CBG00664"
                     /product="Protein CBG00664"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WNC2"
                     /protein_id="CAP21976.2"
                     /translation="MIGMMNSGAESSVEFYAAARQSSLYDARKRSNPLRTYTPEGRVL
                     VNGAPLSPTLDANDLWKNMIIKTAAQKMIRENCEKKESGPMATIKRLSEKFKLKKSKS
                     SAAMMNLDLDLDIPEVAEVESSSKNLETPKTTVISKAPTQFVTNITIDESDFVQPVDR
                     PQMLFEDTSVLARLMEESALMDKMEKESKDSGKGSIDDEMVVVHKM"
     CDS             join(233389..233445,235589..235903,236055..236360,
                     236409..236627,236992..237144,237202..237660)
                     /gene="CBG00666"
                     /locus_tag="CBG_00666"
                     /standard_name="CBG00666"
                     /product="Protein CBG00666"
                     /note="contains similarity to Pfam domains PF01842 (ACT
                     domain) , PF00291 (Pyridoxal-phosphate dependent enzyme)
                     contains similarity to Interpro domains IPR005789
                     (Threonine dehydratase II), IPR002912 (Amino acid-binding
                     ACT), IPR001926 (Pyridoxal phosphate-dependent enzyme,
                     beta subunit)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNC1"
                     /db_xref="InterPro:IPR001926"
                     /db_xref="InterPro:IPR002912"
                     /db_xref="InterPro:IPR005789"
                     /db_xref="InterPro:IPR036052"
                     /db_xref="UniProtKB/TrEMBL:A8WNC1"
                     /protein_id="CAP21975.1"
                     /translation="MVAPSRKKSMIQHHQHDHSHEGTPTKTHHHRVKQAERKRTASIS
                     KEDGIEYNKRVRKLHKAFFNQVTDAPHVEGDKKDSGSNSDAELPLFDPDCDPENPKKL
                     VFSDISAAAFNIKNGVQTTPCVRSLQLSTKCEMDLYFKKEYLQVTGSFKERGARYALS
                     RLAEQYKKAGVIAASAGNHALALSYHGQQMNIPVTVVMPVIAPLMKIQFCRSLGANVI
                     LKGETIAVAKEFALRHAKDNHLKYINGYDAIDILAGQGTIGLEILDQVPDVDTILVPV
                     GGGGLIAGIAVAVKTLKPAVHIYGIEAETCPSFTEAYEVGHIVSAQAKASLADGLAVP
                     TVGGNSLETAKGLIDKVITVKEESIALSILRLLEVEKAVVEGGGAVGLAAILEGKVPE
                     LKGKKVVSILSGGNIDTTVLGRSIERGLAVDGRLVRLEVVVSDRPGGIAELTTTIAHL
                     GASIKDIFHERAWISTDVFHVKVKVVAETRGKEHVEEIETALKKIYDNVILH"
     CDS             complement(join(237986..238018,238480..238670,
                     240199..240421,240472..240775,240826..240984,
                     241673..241848))
                     /gene="CBG00667"
                     /locus_tag="CBG_00667"
                     /standard_name="CBG00667"
                     /product="Protein CBG00667"
                     /note="contains similarity to Interpro domain IPR006150
                     (Cysteine-rich repeat)"
                     /note="Predicted"
                     /db_xref="InterPro:IPR006150"
                     /db_xref="InterPro:IPR028150"
                     /db_xref="UniProtKB/TrEMBL:A8WNC0"
                     /protein_id="CAP21974.2"
                     /translation="MYNENKINVICLLYFSLSAVAIAQQPQFTCPNNANPLVANSGTN
                     LFCTSAGSNTDCPTGSICTTAANAAGILICCSQSTNVNPVCPNSAISQPSNIGYVECQ
                     FNNPTNCISGYQCVQSANLANTFICCSTSASVGSCPSDFTPAVGTNGGTISCNPSAST
                     CPSGSSCMQSTLNTAFICCRSANSQRICANNQNALITNGALELCTTPGTQCSSTGYTC
                     QLSVLLATYVCCGQGSTGSSIGCADGRPVYQQRVGETYTCDITSSLNSCPSGYDCALS
                     DDSFVNVCCLTDTSCPIGFSCAPSNQVSQFLCCRLASSLVCINGKTLLVNGAPKLCTP
                     TTYSQCPYNYSCQQSVNPTVTVCCSNT"
     CDS             join(243207..243297,243379..243519,243561..243883,
                     244048..244679,244733..244803,244851..245071,
                     245620..245803,245849..246056,246310..246429,
                     246475..246607)
                     /gene="Cbr-tdc-1"
                     /locus_tag="CBG_00668"
                     /standard_name="CBG00668"
                     /product="Protein CBR-TDC-1"
                     /note="C. briggsae CBR-TDC-1 protein; contains similarity
                     to Pfam domain PF00282 Pyridoxal-dependent decarboxylase
                     conserved domain contains similarity to Interpro domains
                     IPR002129 (Pyridoxal phosphate-dependent decarboxylase),
                     IPR021115 (Pyridoxal-phosphate binding site), IPR010977
                     (Aromatic-L-amino-acid decarboxylase), IPR020845
                     (AMP-binding, conserved site)"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:A8WNB9"
                     /db_xref="InterPro:IPR002129"
                     /db_xref="InterPro:IPR010977"
                     /db_xref="InterPro:IPR015421"
                     /db_xref="InterPro:IPR015422"
                     /db_xref="InterPro:IPR015424"
                     /db_xref="InterPro:IPR021115"
                     /db_xref="UniProtKB/TrEMBL:A8WNB9"
                     /protein_id="CAP21973.1"
                     /translation="MVYGLGEALKNLNSYCQERTTRIRNSLSPSRPSMSETTIPGTGG
                     SSSSSRASTAIPSTPNMDPTTPTVDDPAPNANNVPGMSRDEFRQYGKETVDYIVDYLE
                     NIQKRRVVPAIEPGYLKDLIPSEAPNAPESFESVMEDFEKLIMPGITHWQHPRFHAYF
                     PAGNSFPSIIADMLSDAIGCVGFSWAACPAMTELELIMLDWFGKMIGLPAEFLPLTEN
                     GKGGGVIQSSASECNFVTLLAARFEIMKELRQRFPFVEEGLLLSKLIAYCSKEAHSSV
                     EKACMIGMVKLRILETDSKFRLRGETLRNAIQEDRNLGLIPFFVSTTLGTTSCCSFDV
                     LSEIGPICKENELWLHVDAAYSGSAFICPEFRPLMNGIEYAMSFNTNPNKWLLINFDC
                     STMWVRDRFKLTQALVVDPLYLQHSWMDKSIDYRHWGIPLSRRFRSLKLWFVIRMYGI
                     DGLQKYIREHVRLAKKMEAMLRGDAKFEIVNEVIMGLVCFRMKGDDETNQTLLTRLNA
                     SGRIHMVPASLGDRFVIRFCVCAENATDKDIEVAYEIISQAAQHVLHDSVKAVIAEED
                     EEAVALEEMVADLNIQETPDKGLARQNSADAVGQRLERQLSKEEILAQKQHESLAKKR
                     SFLVRMVSDPKCYNPKIVRHLNMANHRKMSQDLYRDRTLMQTISHSQRPNRLSQSPGS
                     AGSAFFDDDEDRVVADVQTGLQTPI"
     assembly_gap    245372..245463
                     /estimated_length=92
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             complement(join(246728..247357,247406..247529,
                     247581..248451,248510..248729))
                     /gene="Cbr-gei-14"
                     /locus_tag="CBG_00669"
                     /standard_name="CBG00669"
                     /product="Protein CBR-GEI-14"
                     /note="C. briggsae CBR-GEI-14 protein ;"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WNB8"
                     /protein_id="CAP21972.1"
                     /translation="MKRRGINWKPRLSAGGANRTNMQGIMSRYQQQPPPEEAQVISDR
                     GSDLMPIRRGNSFRPFESRLQPHYRSPPRCYSSGYWKPPPPPIHPAHPPRYGAREPDV
                     LLNDKGRPIPRRGMFLNAKYSAPPPEIDEERVRHTEDVIRRMVRKSRRSEQFSLNAPS
                     NYQLRDSIRQAVYDQGVPDYFRVREPIYDDYEDVRAPRNQRPSSSHHHSATYSMSSRH
                     HPRPSSRYSRGDRRVEFEEDEEDGGYDSDEEEVFEPPPKKQMKRSRYGVDEEERPSRK
                     IRRHHRHVEEERGSSSNEDDVGNRSSNSRVSKASEASRASNKRPNTPEDRPPSCGSKK
                     STPTPGKYIKDSDPEDEIDWKRGVPFMCDERGAAVLDRVGSAIQRLPLRDDAKNSYSQ
                     VAMMLLERSMKNLEKPAAKESFRPQSRLQDMTGSWERTPRQKSPEAVSDALQKTSILR
                     DISKIQHPQNASTLQIDQSLFAIPRLYDVDVVIDEDWMSRKKTRMPPPLHRSSPLSTD
                     VFRSDDVITAPSSIRKEAEVEMAPIQSSFFIANPDFTCNESLGGSMITSLDPRDFGSR
                     TMHFNAQFEFSPRRKKGAVKPMVDMDEEGEKEMEKEFSRMSNQARFAF"
     CDS             join(249099..249210,249265..249550,249597..249813,
                     249863..250138)
                     /gene="CBG00670"
                     /locus_tag="CBG_00670"
                     /standard_name="CBG00670"
                     /product="Protein CBG00670"
                     /note="contains similarity to Pfam domain PF00153
                     Mitochondrial carrier protein contains similarity to
                     Interpro domain IPR018108 (Mitochondrial substrate/solute
                     carrier)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNB7"
                     /db_xref="InterPro:IPR018108"
                     /db_xref="InterPro:IPR023395"
                     /db_xref="UniProtKB/TrEMBL:A8WNB7"
                     /protein_id="CAP21971.1"
                     /translation="MKIPDLTNYEHLIGGFCGGVTSTVVCHPFDLLKVRFSANEGNPL
                     RPQYSSYADAVRKIIRVEGVRGLYQGITPSVIGAAVSWGLYFQWYNTLRAKINEEFST
                     GSEMVNNFISGSVVGSAIMCITNPIWLTKTRLCLQYENHQTKKYSGMIDCMRQTVQQE
                     GFFGLYRGFVTGVIGTSHGAVQIASYSWMLDKRREALGLPKDSFISQTDYTVASAISK
                     TLATTVTFPYQVLRTRMQDHNTDSRGVWRTTLRTIHNEGFSGLWKGCVIANVRQLPAA
                     IVVFLTYENVKRLVRMTEKQ"
     CDS             complement(join(250308..250639,250684..250876,
                     250923..251028,251077..251165))
                     /gene="Cbr-mrpl-10"
                     /locus_tag="CBG_00671"
                     /standard_name="CBG00671"
                     /product="Protein CBR-MRPL-10"
                     /note="C. briggsae CBR-MRPL-10 protein; contains
                     similarity to Pfam domain PF00466 Ribosomal protein L10
                     contains similarity to Interpro domain IPR001790
                     (Ribosomal protein L10/acidic P0)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNB6"
                     /db_xref="InterPro:IPR001790"
                     /db_xref="UniProtKB/TrEMBL:A8WNB6"
                     /protein_id="CAP21970.1"
                     /translation="MLNLSLKPLGSVQVRAVSSKYPRPTPRHFKRRLFEAALQPELPP
                     TVAMCMPPGLVKRQHTEKSKEYSDVELALANLVRSWMVKEEFRVLAVCQFSPVPGRTL
                     WFAKNQLRSKNIEFRSYGNKILKKVFEKTPMSSLNNVLVGSNAILLAKDISAIKTILQ
                     ETDKLNWVEPLVMMADGRIVDMVQARDLAKLSSLEDLRAHTVQILGQQVAQITISLDT
                     ATRHLPSLLDAYASSKQENQN"
     CDS             join(251376..251495,251539..251656,251710..251902,
                     252051..252272,252672..253031,253077..253709,
                     253751..253820)
                     /gene="Cbr-clec-142"
                     /locus_tag="CBG_00672"
                     /standard_name="CBG00672"
                     /product="Protein CBR-CLEC-142"
                     /note="C. briggsae CBR-CLEC-142 protein ;"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WNB5"
                     /protein_id="CAP21969.2"
                     /translation="MRSLLQNLINISILIRFCIAHYCSDNWELLYKENVPVCWTLLKT
                     ADFKADHKTNSKICESLIGGEAAVVRNSAQRAVLSDLVNRLPYPTLTCYKSSHTENLK
                     FKSVDYEEVPEYLRILNENGTVKLSRGIQKNDRITISFSIKGKKPENGRGLDSTLYGF
                     IKIGNSTNHTVTMDCFIPHTSPQCKITGLKGEKKEIIFARSEMKSQVTVEYFGTATFD
                     FLDEKIKVFERYNDEKSSISSTGNPYIGNDLISVENIVVSNVEHSKHCIGMTDYGFET
                     IKLEPEAMPKLHFNSENIEAPRRSLGSNYTYLVSDSFWDYYNGLDLVFDIRMSQDKNG
                     TDFKWVAIDFWSHYLNESIFQLNLNEDLLALTYIYENGTTTMEPYHQITSKKVVLHRL
                     VDFRFTISSDTSNYVKIETVIKNTNIAGQKFQANHSMPIRNFDEIRLRSDVGIFYDVK
                     MKSLRDVEIATCNFRNLGLDRFQKSVPHRSNCITKRNILCQRNSENIIQDVDIPDEPV
                     EKFVWKEDVDAPVTTKKPEKEELVEEKEEEDEEIEIENLGKRISMEYHRDDFPLPRQS
                     LRFLF"
     CDS             complement(join(253936..254532,254582..255576,
                     255634..255726,255782..255800))
                     /gene="Cbr-nst-1"
                     /locus_tag="CBG_00673"
                     /standard_name="CBG00673"
                     /product="Protein CBR-NST-1"
                     /note="C. briggsae CBR-NST-1 protein; contains similarity
                     to Pfam domains PF01926 (50S ribosome-binding GTPase) ,
                     PF08701 (GNL3L/Grn1 putative GTPase) , PF02421 (Ferrous
                     iron transport protein B) , PF00009 (Elongation factor Tu
                     GTP binding domain) contains similarity to Interpro
                     domains IPR000795 (Protein synthesis factor, GTP-binding),
                     IPR011619 (Ferrous iron transport protein B, N-terminal),
                     IPR014813 (Guanine nucleotide-binding protein-like 3,
                     N-terminal domain), IPR006073 (GTP binding domain)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNB4"
                     /db_xref="InterPro:IPR000795"
                     /db_xref="InterPro:IPR006073"
                     /db_xref="InterPro:IPR014813"
                     /db_xref="InterPro:IPR023179"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="InterPro:IPR030378"
                     /db_xref="UniProtKB/TrEMBL:A8WNB4"
                     /protein_id="CAP21968.2"
                     /translation="MAKYCLTSKRVSCAKRYKIEKKVRDHNRKVKKEAKKNGTHNKKE
                     KTISVPNSCPFKEEILVQAEQEREKIKARQEAAKEAAKLHRVEKRKMNLPANFESMVS
                     KAAKQGAEFDKKAANAAEQEKFNTLDDKTIKAYASEVRKTIEIADVIIQVLDARDPLG
                     SRSKSVEEQVLKGGKRLVLLLNKIDLVPRENVQKWLEYLRGQFPTIAFKASTQEQKSN
                     IGRFNSAILNNTETSKCVGADIVMKILANYCRNKDIKTSIRVGVVGFPNVGKSSVINS
                     LKRRKACNVGNLPGITKYVINLTSVITLFCFRELQEVELDKNIRLIDSPGVILVSQKE
                     LDPIEVALKNAIRVDNLLDPIAPVHAILRRCSKETLMLHYNLADFNSVDQFLAQLARR
                     IGKLRRGARPDLNAAAKRVLNDWNTGKLRYYTHPPEAGSVKDDTSVPVEVVTQFSKEF
                     DIDAIADDQNQIIEGLPMESDIIAPQNSEDEEEEEDEGMETEEKKQTVTSGRKVKGPT
                     KDDDKPVLPESLAIEGNVQLNKLIKNAIKKQKKKTKKTSNRADKLSDSIGNMLGESME
                     M"
     CDS             join(256405..256508,256556..257876,257931..258155,
                     258202..258219)
                     /gene="Cbr-cct-4"
                     /locus_tag="CBG_00674"
                     /standard_name="CBG00674"
                     /product="Protein CBR-CCT-4"
                     /note="C. briggsae CBR-CCT-4 protein; contains similarity
                     to Interpro domains IPR017998 (Chaperone, tailless complex
                     polypeptide 1), IPR002194 (Chaperonin TCP-1, conserved
                     site), IPR012717 (T-complex protein 1, delta subunit),
                     IPR001844 (Chaperonin Cpn60), IPR002423 (Chaperonin
                     Cpn60/TCP-1)"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:A8WNB3"
                     /db_xref="InterPro:IPR002194"
                     /db_xref="InterPro:IPR002423"
                     /db_xref="InterPro:IPR012717"
                     /db_xref="InterPro:IPR017998"
                     /db_xref="InterPro:IPR027409"
                     /db_xref="InterPro:IPR027410"
                     /db_xref="InterPro:IPR027413"
                     /db_xref="UniProtKB/TrEMBL:A8WNB3"
                     /protein_id="CAP21967.2"
                     /translation="MAPAVPAAAATARQSASGRERNFKDKDKPESVRNSNIVAAKAVA
                     DAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSKAQDIEAG
                     DGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILEEMSSPVDLKNDA
                     LLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKIINSENDSNVNLKMIKIIKKMGDTVE
                     ESELIEGALIDQKTMGRGAPTRIEKAKIGLIQFQISPPKTDVSFVNKIFQFRDYFQME
                     NQVIITDYAQMDRALKEERQYLLEICKQIKAAGCNVLLIQKSILRDAVNELALHFLAK
                     MKIMCIKDIEREDIEFYSRILGCRPVASLDHFNAECLGYADLVEEVPTGGDGKVIKVT
                     GVQNPGHAVSILLRGSNKLVLEEADRSLHDALCVIRCLVKRKALLPGGGAPEMEIAVK
                     LRNLAQTQHGATQYCWRAFADALELVPYTLAENAGLSPIHTVTELRNNHANGNSSYGV
                     NVRKGYVTDMIEEDVMQPLLVTASAIKQASECVRSILKIDDIVMAVR"
     CDS             complement(join(258563..258691,258739..258972,
                     259016..259369,259417..259503,259552..259677,
                     259763..259855,259901..259993,260650..260745))
                     /gene="CBG00675"
                     /locus_tag="CBG_00675"
                     /standard_name="CBG00675"
                     /product="Protein CBG00675"
                     /note="contains similarity to Pfam domain PF00328
                     Histidine phosphatase superfamily (branch 2) contains
                     similarity to Interpro domain IPR000560 (Histidine
                     phosphatase superfamily, clade-2)"
                     /note="Predicted"
                     /db_xref="InterPro:IPR000560"
                     /db_xref="InterPro:IPR029033"
                     /db_xref="InterPro:IPR033379"
                     /db_xref="UniProtKB/TrEMBL:A8WNB2"
                     /protein_id="CAP21966.1"
                     /translation="MGIIRILILISISHFSTVGAQQSDKQLRMVQVLFRHGARAPTEK
                     ITDPSYHSQFPRGLGEMTDAGFENSYLMGRFLKKRYVDTGFLNPIMNPREMYWRSVNK
                     NRCLSTASTVGFAMFDDEIHHLHVPVQTEEYDEHLLNYNQDRCEREIELVKERCPDFN
                     GTFHPWVKYEAFIANCLNYTHPVFDIYPFENIEAYINEYKNSIPPPKLIQQHLDEVMA
                     IYVNVTHFITGTGNHHDPRMMRVKFGYLMTTLQKEMTWMKEDLEKLARGEPLQYSMRK
                     KFNVYSTQDWILMGVLDSLGVLKNTVGLEVYPEYNSMIILELWEETGRFFVKTFYKKE
                     EITHENHQLLDVSHLVRNCTDTECPFENFISCCEDYKAGSRRGCVSQKRKPRSLWTNE
                     DENVPQFAGPE"
     CDS             join(263119..263244,263304..263396,263474..263671)
                     /gene="CBG25501"
                     /locus_tag="CBG_25501"
                     /standard_name="CBG25501"
                     /product="Protein CBG25501"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:B6IEP1"
                     /protein_id="CAR98371.1"
                     /translation="MSEIDLSKTSESSTENSKSKFNPACEDIEGKLRCLETLLEHPEA
                     TRPELAIPIRHLDLFLRACLHFYTIPKSKKIKERIELIKKACQFLEDVLIRVIVGGEQ
                     LGKAIKRIGPWSDPKFSFKVDCECNGFPSCCYIKNL"
     CDS             join(264128..264195,264250..264361,264413..264589)
                     /gene="CBG25500"
                     /locus_tag="CBG_25500"
                     /standard_name="CBG25500"
                     /product="Protein CBG25500"
                     /note="Predicted"
                     /db_xref="InterPro:IPR042317"
                     /db_xref="UniProtKB/TrEMBL:B6IEP0"
                     /protein_id="CAR98370.1"
                     /translation="MLCQNIPARLKQKVVDLLDYGSRCNLRVSSKDDRDVVDSTKFVP
                     EKLKISEKECDMSEAKSTIRLEIDSFSIWLTGKENLTKIDRGWNGEIVEELSEIKKEN
                     RYENFQKLLLKFSKEV"
     CDS             join(267061..267396,268119..268204,268257..268368,
                     268537..268743,268817..268960)
                     /gene="CBG25499"
                     /locus_tag="CBG_25499"
                     /standard_name="CBG25499"
                     /product="Protein CBG25499"
                     /note="Predicted"
                     /db_xref="InterPro:IPR042317"
                     /db_xref="UniProtKB/TrEMBL:B6IEN9"
                     /protein_id="CAR98369.1"
                     /translation="MKEGPLRIHFTSQHLELVFRGPLANGRGFLALKTTTPEASKIWK
                     EWQKIPTFSHVEDVDHGFLAKPANVFKNRLKLAEEYYLEPSFRVWVESGFAATAEYLN
                     SDKGRLAVLETTIFFYNVLPKYPGPLKQKVVDLFDYESRCNLRITSKDDRVVVDSTKH
                     VPEKLNISEAPSDMSEGKSKIRLEVDSITIWLTRKDNLTKIDRGWNGDIVEELSEIKQ
                     ESRYEIFQTSLLKLSNRCVIEADTVDLHGITCMPPEDLNFKCSSLKMYAILDDFSADW
                     LRKMQPRFKQFKNVAIDC"
     CDS             complement(join(273245..273780,275507..275705))
                     /gene="CBG00679"
                     /locus_tag="CBG_00679"
                     /standard_name="CBG00679"
                     /product="Protein CBG00679"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WNB1"
                     /protein_id="CAP21965.1"
                     /translation="MMIQDNPKPVFIQFKVSSFSHSTSIIRVSLSSYSPRAPAYGHAR
                     LPAEQLLLSSYIQMQQMLGAISYSQNLRISESQNLRISESQNLRISESQNLRISESQN
                     FRISGSQNLRISESQNLRISESQNLKISESQNLRISESQNLRISESQNLRILKSQNLK
                     ISDSQNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRIL
                     KSQNLRISESQNLRISESQNLRISES"
     assembly_gap    273828..274259
                     /estimated_length=432
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             join(278789..278887,279329..279464,279728..280029,
                     280076..280357,280494..281020,281081..281531)
                     /gene="Cbr-efl-3"
                     /locus_tag="CBG_00680"
                     /standard_name="CBG00680"
                     /product="Protein CBR-EFL-3"
                     /note="C. briggsae CBR-EFL-3 protein; contains similarity
                     to Pfam domain PF02319 E2F/DP family winged-helix
                     DNA-binding domain contains similarity to Interpro domains
                     IPR003316 (Transcription factor E2F/dimerisation partner
                     (TDP)), IPR015633 (E2F Family)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNB0"
                     /db_xref="InterPro:IPR003316"
                     /db_xref="InterPro:IPR015633"
                     /db_xref="InterPro:IPR036388"
                     /db_xref="InterPro:IPR036390"
                     /db_xref="UniProtKB/TrEMBL:A8WNB0"
                     /protein_id="CAP21964.2"
                     /translation="MTANVYGSSNAIFLTIEANKENIPPGTEIDIKKEESFLLPEPRG
                     NRPADPDTESLTASPVPRPSPATSQLSDASFLSQDPTVTNSADESEDDPEFTSRKEKS
                     LGLLCQRFLISINEETQESPTKEVHLETVARKMCVEKRRIYDIVNVMEALDAMHKTNK
                     SYYQWQGLESLPRLMADLQAEAIEEGLPDRVLRVEQAMCSFTELQSPRGNKGIKDTVG
                     SFVSGSSAPTTPTTSFEPRRTETEKRSRVDSRDRQGRNSLAQLCRRFLMVLLSNPKNV
                     RKVSLDVASTVLIKDPETEGFEPPSRSRCRRLYDIANVLVALGLIKKVHYLFGTKKIP
                     LFVYCGPEPDEHASFDVFQSVERLLSSPQNVPQTPVIKAQTDKMVQQIAGFGKRTLSE
                     QNLSKPIGNSPKIAKIKSEMSPMTVPVSPMADENRLFMFAELAAAQKMQEDLAQLSRS
                     LMQRVNTPMAPMTAPISSPMVGSAPPPLPMAPLNLSGLGKLPPLVFPPTQLPNLPNTR
                     PKFNFPDYNPTQSTIRPLVSQMTFRPELFENNPIPPPQPPKHLMSNILGESKSFKNMQ
                     NTNNNNFFDHNTKSSAFHVVVKKDEQQQRRTK"
     CDS             complement(join(285944..286096,286145..286331,
                     286453..286652,286702..286923,288291..288536))
                     /gene="Cbr-sra-13"
                     /locus_tag="CBG_00681"
                     /standard_name="CBG00681"
                     /product="Protein CBR-SRA-13"
                     /note="C. briggsae CBR-SRA-13 protein; contains similarity
                     to Pfam domains PF10292 (Serpentine type 7TM GPCR receptor
                     class ab chemoreceptor) , PF02117 (Serpentine type 7TM
                     GPCR chemoreceptor Sra) contains similarity to Interpro
                     domains IPR019408 (7TM GPCR, serpentine receptor class ab
                     (Srab)), IPR000344 (7TM GPCR, serpentine receptor class a
                     (Sra))"
                     /note="Predicted"
                     /db_xref="GOA:Q627G6"
                     /db_xref="InterPro:IPR000344"
                     /db_xref="UniProtKB/Swiss-Prot:Q627G6"
                     /protein_id="CAP21963.2"
                     /translation="MAIVSSENRTCADEKLLALYQSWSYIASIVFNCLVPTISTYFLG
                     RAIFQLCNQATIQYSTRILLIATILFAACHQVSYFAFKIDLLHTMFFKLDQPCFLQRS
                     SYDCRFISIAQTTGVVGMALTGLAMSTDRALALTFPADYHKLKSVPRVVLSVFVFIVS
                     FSTWFLLTMNDPLTGYLNHCGFYPSYSVANFQLMLDVILYLAIFNLIWDVILFYYARQ
                     QILWRRSYQFQKRYEARISLNCTQAVFVISICQCISNGANSGLMRLLMMIGTSITSVT
                     YSSLLSLFYTAPYSCILLPILMMRISEYIREQRTIGILSLRSEKPGLEEHHQRMRAAW
                     S"
     CDS             complement(join(291519..291719,291773..291991,
                     292038..292515,292629..292870,292914..293276,
                     293320..294513,294533..294946,294993..295161,
                     295207..295340,295386..295610,295657..295806,
                     296029..296127))
                     /gene="CBG25498"
                     /locus_tag="CBG_25498"
                     /standard_name="CBG25498"
                     /product="Protein CBG25498"
                     /note="contains similarity to Pfam domains PF00664 (ABC
                     transporter transmembrane region) (2), PF00005 (ABC
                     transporter) (2)contains similarity to Interpro domains
                     IPR003439 (ABC transporter-like), IPR017871 (ABC
                     transporter, conserved site), IPR001140 (ABC transporter,
                     transmembrane domain), IPR003593 (ATPase, AAA+ type,
                     core)"
                     /note="Predicted"
                     /db_xref="GOA:B6IEN8"
                     /db_xref="InterPro:IPR003439"
                     /db_xref="InterPro:IPR003593"
                     /db_xref="InterPro:IPR011527"
                     /db_xref="InterPro:IPR017871"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="InterPro:IPR036640"
                     /db_xref="InterPro:IPR039421"
                     /db_xref="UniProtKB/TrEMBL:B6IEN8"
                     /protein_id="CAR98368.1"
                     /translation="MKRSSRRIPRDGKDGKDGIELKNLKKTAKEKDTDIKLLTTSSDS
                     DSPTPCQLSTFQVILNFITFRCFQNKETLEDEPIGFFELFRYMKPMQLFCLIAGFILA
                     AVSGFFHCSYGYLNGKLTTMFVNPNTTDLEFYEDAMPYGLAFGIAGAFNFGLTTLHSY
                     LIQTAIFRMTQSLEHLFPTSVLRQESEWHDRHSAGTLKTKFNENMGIIKSKLPQISLL
                     FYNFSVYASGVGVSFHVSWKLALLSMLSLPIIMCARAILANKNKTYEEKKEKISEKAA
                     EVVSEALNSVRTVQAFNGQEEIIEKYGNAFEKSATYSIKQALWDDVVWSNCDLMLLTI
                     FGVAINFGVTLYCNKEILEVGMIFTVLFVCLTSSAIAGTSAQIFNDVLNARVAARQIY
                     RVIERSCNEFKNSQVPKIDAMSAEGQKLLNVSGRVEFRNVHFRYSTRRDAKILDGFNL
                     CVEPGTSVALVGHSGSGKSTAFKLLTRLYEQEDGQIFIDGHDIKSLNIGWLRKKVGVV
                     QQEPTVFKDTIRENLLKGNPTATEEEMIQAAQMANAHDFMKLSEGYNTIIGDGGIQLS
                     GGQKQRVAIARTLIRNPKILLLDEATSALDAHSENLVQDALNNARKGRTTIMIAHRLS
                     TIRGADKIVYVEDGKVAEYGTHEELISLRLRYAMMVDAQKFDDDQERVEVDNEDEHSL
                     QGSIQDSNGDSELPSTSDQQASLPHITSTQKDSSTTYGLLDVFGNSSGNYNYMLLATI
                     FAILRSLEQLFWSLLLNWVYDAFKKPPAEMKDELWKSILLFPARQLYKMITNVLVSYL
                     ASKTSENIIRRLRIQCLKSLLNQDGEFFHDPENTPAKMEKALSTYVKDIKPMVDANVY
                     NAISTVFSIMFNLGLAISCCWQVGAVGAGVIMVSGFLIRLLTKKLAEIDKRKKKEEKS
                     PKIVAEMIENSRTIQLLTCSQRLLDSYKEAQAAEAAIGLESIFYKAINDGFGKSHSYF
                     SIFACYFAGIIFVKNGLVIRDDAYRAIQPLYMSAHGVVTFINLIPKFSEGTSAADLIF
                     KLIYRKPATGDIMDGLKPEIQGNISLKSVKLTYSRRPDHPVLTKLTFSARSGQTIALV
                     GPSGAGKSTCISILERFYDVCEGAIEIDGQDIRSLSLYCLRTQMALVGQEPTLFSGTI
                     KENVCFGLNDIPIEKVMEALELANALNFVTNLPAGLHTEVGEKGSMLSGGQKQRIAIA
                     RALVRNPKILLLDEATSALDSQAEKAVQEALDRARQGRTCITIAHRLSSIQNSDVIVY
                     IDHGMVLESGSHKKLMAQKEKYYEMIQKQKLIG"
     CDS             complement(join(297547..297888,298139..298640,
                     298691..299112,300217..301665,301718..302124,
                     302894..303074,303146..303259,303785..303864,
                     303915..303966))
                     /gene="CBG00683"
                     /locus_tag="CBG_00683"
                     /standard_name="CBG00683"
                     /product="Protein CBG00683"
                     /note="contains similarity to Pfam domain PF00839 Cysteine
                     rich repeat contains similarity to Interpro domain
                     IPR001893 (Cysteine-rich Golgi apparatus protein 1
                     repeat)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNA8"
                     /db_xref="InterPro:IPR001893"
                     /db_xref="InterPro:IPR017873"
                     /db_xref="InterPro:IPR039728"
                     /db_xref="UniProtKB/TrEMBL:A8WNA8"
                     /protein_id="CAP21962.2"
                     /translation="MLWRYPLILATFCWLGTAAQQNDPEKKLSSFDACKADIHKHCSR
                     PDVDLSSDMSILECLQDAGLSETATLSEQCEQLVWDFKVKITQDERFVTAAKQYCEEE
                     LKSNVAMQTCTSQTQPGYALSCLIEFTKNVTETSKCHAFLARTERLAFSDFRLVGPFV
                     TKCRAVLDQFKCNVLTPDPAHKGVRVAHTQGMALECILDKVVKNAKTQADALAILGDE
                     CKHEVLRLAEMQADDFHLDRPLFFACRLDRERYCKDVPSGQGKVFECLMMNRNDKFMD
                     TECGNLLAERAYLMGRDYRMAHPLTKACQPELTRYKCEPQNQIEAAAHFHLAWILLCL
                     ENGANQPEHKELPPSKECSHEMITHRQMMMQHFRMAPELVLNCAQEIDKWCSPTGDIE
                     AEGRTLHCLMEHAESRNETQKLGAQCLQAVQQVVKVADIGRNYKVDKVLYGSCRALID
                     GPCAQDAVSETATLTCLMKNVDSPDMVPECEKRLLEVQYFMARDWTLDPQLYEACHKE
                     AVERCSALDNWHQQHNTDKAVDPGPQVLACLYRTAYDEVRPLSQACGTQVRQLLHVRA
                     VRVNLIPEIEDGCREALSEFCSHNVKPSEEMMCLQQNFESDQFKRKYPVCFQHLTKFT
                     EMEAKDTKLNRALTKACKPVISTHCAQFALEDIDHGDVLECLVNNKDAKEMTTKCRSY
                     VNHFELISLRDYHFSYKFQKACAADIEQNCRDHNNDKGEIIRCLSEVRFEHKVLGSAK
                     DLTDDCKKQLKVAYLQQEQVEFDDKEHMADADPKLSQKCAREIQIFNCNKAETFEETV
                     ECLRLNFEQLGPDCKSMIFYREKIEAVDNSMDDELQKKCRYDISKFCGNSDSENVLEC
                     LTNTKIVRLLQRECKAVVKERMQESARDVRLRPQLLTSCRKEAETYCPEDMKKINMPQ
                     YSQTVLDGVVVACLREKFRQSISDQNHIEFSPRCSAEVSRAIVEAEFDPQLDPPLYNA
                     CKSTINSRCSAQILESGGHFDNVMECLKADFNKGLIKDNSCAGQVARRLQESLVDIHL
                     DPVLHEACAMDIQRNCRDVPPGHSRSECFGSLNSVKIFKESSNYKNLRIQKNLIFQSE
                     ISVVMCLMDSADKQQLSKECSTKLNDRNKLWMKAHSEFQMALPDSWHAFATLVMEHPE
                     RNSILGYIAGFVVFVLLVGCCCGRVSKKQYIEMKNR"
     CDS             complement(309606..309779)
                     /gene="CBG00684"
                     /locus_tag="CBG_00684"
                     /standard_name="CBG00684"
                     /product="Protein CBG00684"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WNA7"
                     /protein_id="CAP21961.2"
                     /translation="MYINPDYYYVEQLPTMKKSGQLRALAGSRNCFFSPVNCIITHDI
                     NSYRRLAKGSSVA"
     CDS             complement(join(326070..326221,326671..326807,
                     327427..327554,327662..328076,329842..329902,
                     329930..330047,331046..331247,331752..331891,
                     331938..332041,332091..332217,332266..332408,
                     332887..332980,333276..333395,334061..334168,
                     334269..334348,334393..334591))
                     /gene="Cbr-shw-1"
                     /locus_tag="CBG_00686"
                     /standard_name="CBG00686"
                     /product="Protein CBR-SHW-1"
                     /note="C. briggsae CBR-SHW-1 protein; contains similarity
                     to Pfam domains PF02214 (K+ channel tetramerisation
                     domain) , PF07885 (Ion channel) , PF00520 (Ion transport
                     protein) (2)contains similarity to Interpro domains
                     IPR005821 (Ion transport), IPR000210 (BTB/POZ-like),
                     IPR003971 (Potassium channel, voltage dependent, Kv9),
                     IPR003968 (Potassium channel, voltage dependent, Kv),
                     IPR003131 (Potassium channel, voltage dependent, Kv,
                     tetramerisation), IPR003091 (Voltage-dependent potassium
                     channel), IPR013099 (Ion transport 2), IPR003974
                     (Potassium channel, voltage dependent, Kv3)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNA6"
                     /db_xref="InterPro:IPR000210"
                     /db_xref="InterPro:IPR003131"
                     /db_xref="InterPro:IPR003968"
                     /db_xref="InterPro:IPR003974"
                     /db_xref="InterPro:IPR005821"
                     /db_xref="InterPro:IPR011333"
                     /db_xref="InterPro:IPR015572"
                     /db_xref="InterPro:IPR027359"
                     /db_xref="InterPro:IPR028325"
                     /db_xref="UniProtKB/TrEMBL:A8WNA6"
                     /protein_id="CAP21960.1"
                     /translation="MDTEHRVILNVGGIRHETYSHVLKKIPATRLSRLTPNTANYDPV
                     LNEYFFDRHPGVFSMIMNYYRTGKLHYPTNVCGPLFEEELEFWGLDANQVEPCCWMTY
                     TQHRDTQETLAVIESLDLDGDPPSQEEIAKKFGWEDDFHSGSLSQWQRLKPRVWSLFD
                     EPYSSKYARAISCISVAFILVSTCSFILKTDPSFQIPDIDVFYSLRVVDENGFKNYHK
                     TIGTDKPVTSPHPNFFYVDLICNIWFTFELFIRSIFCPSFHKFVRSPLTIIDVVSTGA
                     FFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFSGLKILIQTFKASAQELSLL
                     VFFVVLAIVIFAALVYYAERSQLNKDNQFTSIPLGLWWSLVTISTVGFGDMVPKTYLG
                     MLVGSLCALMGVLTIALPVPVIVSNFSNLYSHSQARGKLPKKRRRVLVSLVNIIFVII
                     SIVCFCLKTHPNYRIPDIDISTHMGNLSIGNGPSKIQLNTIYVGKMATRAHPAFFYVE
                     LFCNIWFSAEFLVRMVFCPNLGRFLKTPVNIIDFIATVSFYIDWALDRALSGSNRDSV
                     EFFSIIRILRLFKLTQHSTGLKILIQTFKASAQELFLLVFFVLLGIVIFAALVYYAER
                     VERNENNQFSSIPVPQTSLGRVVGSVCALMGVLTIALPVPVIVSNFAMFYSHAQARSK
                     LPKKRRRVLQANEAKVGRGTAAVMINAFTPRGPVGGGGSNPSDGNPLSAFSKTPLLVC
                     TPDGTDKPRRLSQNKNGGNVPPVTQNNNCKANKLI"
     CDS             join(342741..342972,343652..343805,345257..346064)
                     /gene="CBG00687"
                     /locus_tag="CBG_00687"
                     /standard_name="CBG00687"
                     /product="Protein CBG00687"
                     /note="Predicted"
                     /db_xref="InterPro:IPR011042"
                     /db_xref="UniProtKB/TrEMBL:A8WNA5"
                     /protein_id="CAP21959.1"
                     /translation="MGSFRWDWNKEKEKKKYGENKNKKEKKEASVTDKESAVWRKMGM
                     DRISCFRRRRASLSDTRTCHVSDSKKKEKKKNFESQNLRISESQNLRISESQNLRISE
                     SQNLIISESQNLRISESQNFRISESQEISESQNLRISESQNLRISESQNLRISESQNL
                     RISESQNLRISESQNLGISESQNLRSSETQNLRISESQNLRISEAQKLRISESQNLRI
                     SESQNLRISKSQNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRISE
                     SQNLRISESQNLRISESQNLRISESQNLRISVSQNLRISKSQNLRISESQNLRISESQ
                     NLRISESQNLRISESQNLRISESQNLRISESQNLKIPKSQNLRISETQNLRNSESQNL
                     TVSLD"
     assembly_gap    346639..346858
                     /estimated_length=220
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             join(347080..347311,347999..348144,348355..348622,
                     349451..350700)
                     /gene="CBG00688"
                     /locus_tag="CBG_00688"
                     /standard_name="CBG00688"
                     /product="Protein CBG00688"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WNA4"
                     /protein_id="CAP21958.1"
                     /translation="MGSFRWDWNKEKEKKKYGENKNKKEKKEASVTDKESAVWRKMGM
                     DRISCFRRRRASLSDTRTCHVSDSKKKEKKKNFESQNLRISESQNLRISESQNLRISE
                     SHNLRISESQNLRISEFQNLRISGILRTSEPRILGISESHNLRISESQNLRISESQNL
                     RILESQNLRISESQNLRISESQNLRISESQNLRILESQNLRISESQNLRIPKPQTYLI
                     ISEFQDLRISESKNLKISESHGFIGFEEFRNLEIQKFGDFRILEFQNLRISESQNLRI
                     SESQNLRISESQNLRISESQNLRISESQNLRISESRNLRISESQKLRNSESQNLRISE
                     SQNLRSSEAQNLRISESQNLRISESQNLRISESQNLRISESQNLRISEFQNLRISESQ
                     NLRISESQNLRISESQNLKISESQSLRISESQNLRISESQNLRISESQNLRISESQNL
                     RISVSQNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRI
                     SESQNLRISESQNLRISESQNLRISESQNLRISVSQNLRISKSQNLRISESQNLRISE
                     SQNLRISESQNLRISESQNLRISESQNLRISESQNLKIPKSQNLRISETQNLRNSESQ
                     NLTVSLD"
     CDS             complement(join(361928..362035,362084..362655,
                     362703..363335,363406..363712,363760..363858))
                     /gene="Cbr-ran-3"
                     /locus_tag="CBG_00692"
                     /standard_name="CBG00692"
                     /product="Protein CBR-RAN-3"
                     /note="C. briggsae CBR-RAN-3 protein; contains similarity
                     to Pfam domain PF00415 Regulator of chromosome
                     condensation (RCC1) repeat contains similarity to Interpro
                     domain IPR000408 (Regulator of chromosome condensation,
                     RCC1)"
                     /note="Predicted"
                     /db_xref="GOA:A8WNA3"
                     /db_xref="InterPro:IPR000408"
                     /db_xref="InterPro:IPR009091"
                     /db_xref="UniProtKB/TrEMBL:A8WNA3"
                     /protein_id="CAP21957.2"
                     /translation="MTSVERMDTSEVEVPNDREIEKITEQDLQQDDATPREDQPETSS
                     SRAKAPVEEEVAEQVELADLEAEATDSIVDNVPKTPRRAGRPKKLSSASATAVAETAV
                     TPGKRGRKRKGSESANTTVNSTLNEPKTPGRKQAKLAVALLTYQQFAPSVIGDRVLSC
                     GEGEALGHPGRTTTKKPRKVDIFEEEGLKMLQVVAGGVHSAVLTSEGQVFMCGINEKG
                     TVPAEGVEMEGSTDEFTKVPFSDEIQEEGKIIMLAAGASFTAGLTDQGSVIAWGNLRN
                     SNGNVDVHPLLHKMQEKPVVIVHQAKRKIVKIAAGENHLVMLDEKGCILTFGDGEMGQ
                     LGRSSRTKTIRSKFMCDESGDHLVVPLRFKNKGKFYDVVAKNVFASGFWTIVHGEDGK
                     YYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAEAPAFGAEQTFVNIEGVQHVV
                     LLDNEGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDSLQQVEFDSKIVGVSAKLATSI
                     AWSEDGTAYAWGFDTTGQLGLGLKDDDEKMVGKPEEISSAHLEDHSIIGASISDQHTL
                     ILAKKN"
     CDS             join(364273..364413,364464..365156,365208..365533,
                     365684..365732)
                     /gene="CBG00693"
                     /locus_tag="CBG_00693"
                     /standard_name="CBG00693"
                     /product="Protein CBG00693"
                     /note="contains similarity to Pfam domain PF07992 Pyridine
                     nucleotide-disulphide oxidoreductase contains similarity
                     to Interpro domains IPR013027 (FAD-dependent pyridine
                     nucleotide-disulphide oxidoreductase), IPR023753 (Pyridine
                     nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding
                     domain)"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:A8WNA2"
                     /db_xref="InterPro:IPR023753"
                     /db_xref="InterPro:IPR036188"
                     /db_xref="UniProtKB/TrEMBL:A8WNA2"
                     /protein_id="CAP21956.2"
                     /translation="MKYVIVGGGIAGVSCANEIIGLERCPKLEVVLVSGSSSVKSVEN
                     YRKIGQYGEKFDVKEADSSEIFPDKRFKFLHATVTNWDAQKKQITLQNGETLKYDKLC
                     IATGSRPKLQDELGSDSRFLFLRDTQSARELQNQLGNAKHLLIVGNGGIATELIYELK
                     NVFVTWLVRDAWICASFFPDDVEKFVEDRLLTGRSGGKKHDGVQKHLQYSTSSMNAEK
                     SSEKLQGPALGPDWCSGIDFGVEASGNSGKRSVKILRNSVIGNIETSEELVVEYLDRS
                     TGVKNSLKPDLIIWAGGVVANSEVWREERSLETAHNGGIAVNDACETSIPDVYGCGDV
                     SMLTLPESSLWKQRQLWTQARQLGEVCGRAMAAGAEEARMQNMYFELFSHCTTGEVEK
                     KEGAYTKILG"
     CDS             complement(join(365807..365826,365881..366415,
                     366790..366908,366957..367233,367279..367602))
                     /gene="Cbr-hel-1"
                     /locus_tag="CBG_00694"
                     /standard_name="CBG00694"
                     /product="Protein CBR-HEL-1"
                     /note="C. briggsae CBR-HEL-1 protein; contains similarity
                     to Pfam domains PF00270 (DEAD/DEAH box helicase) , PF00271
                     (Helicase conserved C-terminal domain) contains similarity
                     to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH
                     box type, N-terminal), IPR014001 (DEAD-like helicase),
                     IPR001650 (Helicase, C-terminal)"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:A8WNA1"
                     /db_xref="InterPro:IPR001650"
                     /db_xref="InterPro:IPR011545"
                     /db_xref="InterPro:IPR014001"
                     /db_xref="InterPro:IPR014014"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="UniProtKB/TrEMBL:A8WNA1"
                     /protein_id="CAP21955.1"
                     /translation="MEDEQLLDYEEEQEEIQDKQEVGGGDSKKTKGTYASIHSSGFRD
                     FLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQL
                     EPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDC
                     PHIVVGTPGRMLALARSGKLKLDKVKYFILDECDKMIGDADMRRDVQEIVKMTPQQKQ
                     VMMFSATLPKELRAVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAEKNRKLLNL
                     LDILEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKR
                     ILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDENDA
                     KVLNSVQDRFDISITELPEKVDGATYIEGRTN"
     CDS             join(367887..367931,368025..368089,368140..368326)
                     /gene="CBG00695"
                     /locus_tag="CBG_00695"
                     /standard_name="CBG00695"
                     /product="Protein CBG00695"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:A8WNA0"
                     /db_xref="InterPro:IPR016156"
                     /db_xref="UniProtKB/TrEMBL:A8WNA0"
                     /protein_id="CAP21954.2"
                     /translation="MRARSKNNFGCQEDDVVFLGDYKPERQQAGAWKVVLRGTEEDKL
                     VRCVVVNNVIVGALLIGETEMEETLENLILNKTDLEGIADTFLEPGVDLDDYFD"
     CDS             join(368506..368569,368611..368813,368865..369326,
                     369371..370042,370088..370609,370653..371065,
                     371184..371373)
                     /gene="CBG25497"
                     /locus_tag="CBG_25497"
                     /standard_name="CBG25497"
                     /product="Protein CBG25497"
                     /note="contains similarity to Pfam domain PF00288 GHMP
                     kinases N terminal domain contains similarity to Interpro
                     domains IPR001174 (Galactokinase/homoserine kinase),
                     IPR006204 (GHMP kinase)"
                     /note="Predicted"
                     /db_xref="GOA:B6IEN7"
                     /db_xref="InterPro:IPR001174"
                     /db_xref="InterPro:IPR006204"
                     /db_xref="InterPro:IPR020568"
                     /db_xref="InterPro:IPR036554"
                     /db_xref="UniProtKB/TrEMBL:B6IEN7"
                     /protein_id="CAR98367.1"
                     /translation="MRWDIVTFSLGYGIDSHSIDSDIQHFQNINFPDCQEEILVVNDA
                     SEDVGSGGSALNALIRTAERLCYRNKFTVLTEAVLQDVNVLIVLVSDPRAILNSDGFS
                     SGGNGYIFNTYLSNSIKNAAKIAEKARQKGVWIIGSDASWDLVPEVMFDLPEDSISGF
                     SFAGEKSVFSEHGWCRTDKNGKLVGMEFDGEVSGTSQFLEKSVILGFIYLPPQIATSF
                     LSLYSEYPVAATTYLGIDSNVTPLKLSIFFDFMLATCTSEPEFVSNQLGVRGKVSENI
                     KDRTKARKQIYKKLRSYKGRVGGLKSGNISKNLLRKVLEVLDITNFKYKEFPESPQSY
                     TSLIDEMHESLESRTDSDVERCLRSILSLQGVDSIVGIFSFLREQILKFDEKNQLQII
                     FTASLALSLASNGKGGLRNGPAKNAVFENLSLNEIFDEILKNWLSDPSKMIRAARHLE
                     TAGQKVIHRMVDDLCSSRTIKLEKSNNPKLLSALVTAPVRIDFFGGWLDTPPIFFGFS
                     ENAAVVNMAVQLDGKNPIRCHITKSTSPVIELCQDGSTILIESDKDLLHMHDKPSETG
                     ALVSACIVSLGFHSLAEFFEILQCTGLRIETRSELPHGSGLGTSSILACTILKAICAL
                     GKVSEEQFSLEDQIVHTVLRVEQIMTTGGGWQDQCGAMYGGLKKCFYQEGNGIRHQTI
                     HLNPAIKNLLEERLLLVYTGKTRLAKNLLQEVIRNFFTCIDTKRKLRDMAETVDDFSE
                     RIEKGYVSVELLRKYHETKKFMTRFEPAIVTELLETLQRKSMIDVGWAAGAGGGGFLY
                     LWLCDQYSPEYVKNFLKSQPQFSSMTCHRITIPLVPPVTLELN"
     assembly_gap    371826..373691
                     /estimated_length=1866
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             complement(join(378863..379990,380045..380047))
                     /gene="CBG00697"
                     /locus_tag="CBG_00697"
                     /standard_name="CBG00697"
                     /product="Protein CBG00697"
                     /note="Predicted"
                     /db_xref="InterPro:IPR011042"
                     /db_xref="UniProtKB/TrEMBL:A8WN99"
                     /protein_id="CAP21953.1"
                     /translation="MNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLR
                     ISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRIS
                     ESQNLRISESQNLRISESQNLRISESQNLRISESQNLRILESQNLRISESQNLRISES
                     QNLRISESQNLRISESQNLRISESQNLRITESQNLRISESQNLRISESQNLRISESQN
                     LRISESQNLRILESQNLRISESQNLRILESQNLRISESQNLRILESQNLRISESQNLR
                     ISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRIS
                     ESQNLRISESQNLRISESQNLRISESQNLRISESQNHRISES"
     assembly_gap    380170..380662
                     /estimated_length=493
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             complement(join(380681..381144,381197..381488,
                     382061..382132))
                     /gene="CBG00698"
                     /locus_tag="CBG_00698"
                     /standard_name="CBG00698"
                     /product="Protein CBG00698"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WN98"
                     /protein_id="CAP21952.2"
                     /translation="MILSTFQTTRSHAVWKLAFRKGAIYLRITESQNLKFLNCKILQI
                     SESQNLRISESQNLRISESQNLRISESQNLRISGSQYLRISKFQNLRTSESQNLRVSE
                     SQNLRISESQNLRISGSQDQSQNLRISESQNLRISESQNLRISESQNLRISESQNLRI
                     SESQNLRISESQNLRILESQNLRISESQNLRISESQNLRISESQNLRISESQNLRISE
                     SQNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRITESQNLRISES"
     assembly_gap    391592..392002
                     /estimated_length=411
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             392539..393012
                     /gene="CBG00699"
                     /locus_tag="CBG_00699"
                     /standard_name="CBG00699"
                     /product="Protein CBG00699"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WN97"
                     /protein_id="CAP21951.1"
                     /translation="MVWILENLRISESQNLRISESQNLRISESQNLRISESQNLRISE
                     SQNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRILESQ
                     NLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRITESQNLRISES"
     CDS             join(394710..394872,395612..395805,395857..396095,
                     396140..396442,396489..396702,397158..397296,
                     397355..398036,398743..398878)
                     /gene="Cbr-eff-1"
                     /locus_tag="CBG_00700"
                     /standard_name="CBG00700a"
                     /product="Protein CBR-EFF-1, isoform a"
                     /note="C. briggsae CBR-EFF-1 protein; contains similarity
                     to Interpro domain IPR013090 (Phospholipase A2, active
                     site)"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:H8WGX7"
                     /db_xref="InterPro:IPR029213"
                     /db_xref="UniProtKB/TrEMBL:H8WGX7"
                     /protein_id="CCG58658.1"
                     /translation="MRPRKMRSPNILILIVFWVATSSGFPLEEKFEGLFRAEPPHCSK
                     TPIVRAQTSQNAMSSIARGMQMQFSIGLHTAVCFRLFEDTRLASTSMNGIGDDDAGNQ
                     TSLLHTIRLEKLEHHHPITQRYIFGIPEVHASCICECDATASTCTAESHQFTACPESD
                     KSDESTACYRTFFPNQTPIGCSEDDSPKLCCDVRFKPYKNMTFLAVKLEQPTTYATFV
                     YAAYDFVNGYWVEKDKTTIRSQLDGGTQDRHLDSKRRISLAVTAGGRASHQLETGMYF
                     SRTSNGGETEELRMQPLNEITDNNFDRLGWYRMDESGHFHVNNGVVKMDDIHKAKVKN
                     CKEQTYRSILAANNYVSLFSTTVDCSLSLPYRKEAKEMPGHFNLSRPLEVSKPWIQSA
                     RIFDSSSRQAVVTHAEGTNLQISIHLDDEVESQNLVFFHNASRIREFSGSIIVDSKSN
                     RLFNLTVYEASGKIDGSVKMSTGFGSDTIHTFTAYVSDLHAANRSMIIPLPAIVGPGA
                     RTICLRADSMADIDSICHVVEYFESPLEIDLVEGKWHEMIGTCPTCNQINFNGMMKFL
                     NPAHWIKGISSIGDGVMIATDIVVYLGVLCILYLLITKIIIPLVRCWVCPMSICCSGG
                     SGSSKNKSEKRRRGRDEKRRRENSSSASPNASPRRTHASPRDAHDTLARYHGGSDRSY
                     YSSSQYI"
     CDS             join(394710..394872,395612..395805,395857..396095,
                     396140..396442,396489..396702,397158..397296,
                     397355..397929,398743..398814)
                     /gene="Cbr-eff-1"
                     /locus_tag="CBG_00700"
                     /standard_name="CBG00700b"
                     /product="Protein CBR-EFF-1, isoform b"
                     /note="C. briggsae CBR-EFF-1 protein; contains similarity
                     to Interpro domain IPR013090 (Phospholipase A2, active
                     site)"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:H8WGX8"
                     /db_xref="InterPro:IPR029213"
                     /db_xref="UniProtKB/TrEMBL:H8WGX8"
                     /protein_id="CCG58659.1"
                     /translation="MRPRKMRSPNILILIVFWVATSSGFPLEEKFEGLFRAEPPHCSK
                     TPIVRAQTSQNAMSSIARGMQMQFSIGLHTAVCFRLFEDTRLASTSMNGIGDDDAGNQ
                     TSLLHTIRLEKLEHHHPITQRYIFGIPEVHASCICECDATASTCTAESHQFTACPESD
                     KSDESTACYRTFFPNQTPIGCSEDDSPKLCCDVRFKPYKNMTFLAVKLEQPTTYATFV
                     YAAYDFVNGYWVEKDKTTIRSQLDGGTQDRHLDSKRRISLAVTAGGRASHQLETGMYF
                     SRTSNGGETEELRMQPLNEITDNNFDRLGWYRMDESGHFHVNNGVVKMDDIHKAKVKN
                     CKEQTYRSILAANNYVSLFSTTVDCSLSLPYRKEAKEMPGHFNLSRPLEVSKPWIQSA
                     RIFDSSSRQAVVTHAEGTNLQISIHLDDEVESQNLVFFHNASRIREFSGSIIVDSKSN
                     RLFNLTVYEASGKIDGSVKMSTGFGSDTIHTFTAYVSDLHAANRSMIIPLPAIVGPGA
                     RTICLRADSMADIDSICHVVEYFESPLEIDLVEGKWHEMIGTCPTCNQINFNGMMKFL
                     NPAHWIKGISSIGDGVMIATDIVVYLGVLCILYLLITKIIIPLGKFVKCISKCFSKTY
                     TCISERCS"
     CDS             complement(join(399352..399479,400134..400245,
                     400288..400376,400425..400671,401125..401369,
                     402068..402176,402223..402491,404461..404547,
                     404594..404664,404717..404852,407862..407916))
                     /gene="CBG00701"
                     /locus_tag="CBG_00701"
                     /standard_name="CBG00701"
                     /product="Protein CBG00701"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WN95"
                     /protein_id="CAP21949.2"
                     /translation="MHFHRLFILLSAIFVLSKGTRCRLPWTGVWLENGNELNITHNSI
                     GNLGNCVQRSRDLFMLTSDTSRGPCYRCVITFPVHENVLHYKTTQCVFDQAMELDKCS
                     HLMSADTTMHTLFRKEAIPVPCPIEAPMNFTYQTNQGICNSRTSHLHRCAQYDRLALH
                     YQACPEIPNRESAIWQMECIGSWQSFGLHYFAARVGYSAGEQYRCFIHDKSGSSGRIG
                     ESADAGCQELTHIGAAATTLHYRQDSPVHSACEFPINMYGEKSRNWESMLSGTYHRMY
                     HGAWISSVKGRNDTVWTCLQQFPTDREEHFTFRTYVTKGCKVGYQCVRFHMRKPHIVH
                     IEFGEINPSESFTDCSEFVVETRDTLILHGSKEACPIGGKHYSSLCPGPILQVGCSSK
                     YSMSLIRDCSYPDGDEMTCVANFKHEGNDFIIARDGLSRQLFCMTYVSDRINLLRVYD
                     RVSCEDVSVNSATPFLSLNFSSSDSCSPSLLTGFLYSATSDVAPPCHHPHLVILLAIL
                     ISIQNIL"
     assembly_gap    401624..401972
                     /estimated_length=349
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             complement(join(413048..413053,414070..414849,
                     415053..415137,415188..415270))
                     /gene="Cbr-col-77"
                     /locus_tag="CBG_00703"
                     /standard_name="CBG00703"
                     /product="Protein CBR-COL-77"
                     /note="C. briggsae CBR-COL-77 protein; contains similarity
                     to Pfam domains PF01484 (Nematode cuticle collagen
                     N-terminal domain) , PF01391 (Collagen triple helix repeat
                     (20 copies)) contains similarity to Interpro domains
                     IPR002486 (Nematode cuticle collagen, N-terminal),
                     IPR016160 (Aldehyde dehydrogenase, conserved site),
                     IPR008160 (Collagen triple helix repeat)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN94"
                     /db_xref="InterPro:IPR002486"
                     /db_xref="InterPro:IPR008160"
                     /db_xref="UniProtKB/TrEMBL:A8WN94"
                     /protein_id="CAP21948.2"
                     /translation="MYQQKDEKTLMQEAEGLRKIAFFGICISTVATLTAIVAIPSLYN
                     YMQTVQSTLQTEVDFCVHRTNGLFEQYERIKGVKKLVKRQAGYGAPAEYSTDAAVSAP
                     AAEAGGQCCSCGSGPAGPPGTPGEDGRDGNDGQPGPDGQPGADAPAEAIPTADDFCFD
                     CPAGPPGAPGNAGPKGAPGNAGANGNDGAPGQDGAPGNADHKDHQDKTEPPDNQDKTD
                     SQESSRRSPSHQAHQDQPELQEPQEPTDSQEPLDNQDKTDHKDQLEMLDPMEPQDSQE
                     HQESKERPDSQEREVAAITAHHQEPLQDINFGRSSLELLFT"
     CDS             join(418407..418585,418635..418790,418864..418969,
                     419368..419511,419675..419884,419928..420059,
                     420188..420381,421042..421309)
                     /gene="CBG00704"
                     /locus_tag="CBG_00704"
                     /standard_name="CBG00704"
                     /product="Protein CBG00704"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WN93"
                     /protein_id="CAP21947.2"
                     /translation="MFLILLLLKIINSPILQIDAKSPTRSKRQCGCSSSKPQMSCKCS
                     PSTSTSQRVCSCSPLATQSSSSCGCQSSSCANSCRSTCRPTCSSSGGGFGCRMNCQNS
                     CVNACNKQFAPSATSAPIQIQVKAQQPSVVRAVAGQSCLSDCNSQCSNVCQQKQYGSS
                     QCASSCNRSCSRVCQSNPSATGGAAAQTTTQAPLKVSIKVLDDGANCMSTCSDTCRSS
                     CSNRVSQSTCDATCQNTCNSMCPAQAPAQAPVQQTTTTNSPIKIKIQVQQQPTQQQQQ
                     QPSVQNSPPQQVQQQQQPQASQAAPQAAAPVQQQPGNCMSQCQTGCATSCAQLSPQPT
                     EGCPTSCQNTCRDVCAPIVASQPSTPSPQSYPVLLDPQQRCSSECQSVCQLACVTQKS
                     APPSSCLDKCSPQCDSACTSPQVQKNSAQLFTPSSDQSSSAQPIRINISLAPLTPSAS
                     TSTSSTPAPTSL"
     CDS             complement(join(421661..421880,422254..422446,
                     422573..422749,423493..423661,423697..423792,
                     423840..423965,424040..424233,425882..426370,
                     427217..427507,427764..427874,429245..429293))
                     /gene="Cbr-amt-3"
                     /locus_tag="CBG_00705"
                     /standard_name="CBG00705"
                     /product="Protein CBR-AMT-3"
                     /note="C. briggsae CBR-AMT-3 protein; contains similarity
                     to Pfam domain PF00909 Ammonium Transporter Family
                     contains similarity to Interpro domains IPR001905
                     (Ammonium transporter), IPR024041 (Ammonium transporter
                     AmtB-like), IPR018047 (Ammonium transporter, conserved
                     site)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN92"
                     /db_xref="InterPro:IPR001905"
                     /db_xref="InterPro:IPR018047"
                     /db_xref="InterPro:IPR024041"
                     /db_xref="InterPro:IPR029020"
                     /db_xref="UniProtKB/TrEMBL:A8WN92"
                     /protein_id="CAP21946.2"
                     /translation="MEGMGSIFNASAMQIVQIHHYAENLHSSEVDKLYQDDAVWIISS
                     SFIIFTMHSGFGLLESGSVSAKDEVNIMVKNVVDVVFGGLSYWSCGFGFSYGDYEPWR
                     NPYIGFGKFFYDPTRDYDSRESINQEGWSYASFLFQLSLATTASTIVSGAVAERAKLK
                     SYILLGCIVILIQALPAHWVWDKEGVFYKKGVVDFAGCSAVHMVGGIIGLIATVYLKP
                     RRNRFNEDSVHQMSSPTNALLGTFLLWWGWFGINAGSVWGITGGRWRLGARAAVATIM
                     ASIGGGATAITISFVKTKKLQVNFLINGILSSIVSITAICAVSRPWHALVIGSISSVF
                     SIAILPVLDRLHIDDPVGIVPIHLTSSIWGMIAVGIFCEQDKYLTSATNNMSGLLYSW
                     SFDLLLVQLLCTFTILLYSAATGFLALFLISKSPLGLRVTDYEEQIGADVIEHGLAGT
                     NVVGLFEKTRKNGIGFQNISNCHKSNNQVENAGEEEKSAKANGSGKIETRSGARNVCS
                     TALANGNGATPNGNGNVLHHRNNATNNTNTTNSNGAGPPKRNSVHAFNNQVAPLAVSS
                     TVTTARNAPSTGRRAESTAIEMEGGPLPTAPVLQEAAPVENVPTSSAAVQRQPSWESK
                     PSSAASRKSISITSATSVSTGTATALSVGQSESRPSTVSATSLASRKSKNSTLGKFVK
                     APAPRALSPPMDNPLNPPTTDV"
     CDS             join(441473..441740,443249..443653,443777..443854,
                     443932..444347)
                     /gene="CBG25496"
                     /locus_tag="CBG_25496"
                     /standard_name="CBG25496"
                     /product="Protein CBG25496"
                     /note="contains similarity to Pfam domain PF06479
                     Ribonuclease 2-5A contains similarity to Interpro domain
                     IPR010513 (KEN domain, ribonuclease activator)"
                     /note="Predicted"
                     /db_xref="GOA:B6IEN6"
                     /db_xref="InterPro:IPR010513"
                     /db_xref="InterPro:IPR038357"
                     /db_xref="UniProtKB/TrEMBL:B6IEN6"
                     /protein_id="CAR98366.1"
                     /translation="MFNAFFDFETLNGLESCLQFWDHATYIFKPKKIIVEFHNDQLAS
                     EQIRKYLAISLQKEYHQISIRRGTVDSEYLDYLMENVNLNSKLLIGKKNWRRRKKHLR
                     TTLIGKVQRNGCGGSSISGVVIKVCQKRNREPSGRRPPSKHHPLGVFRSSGHAILCCP
                     RAVRGQPVRLYPDAGSPGKNRDQSGRSSGWGVTRLGRASPLPNHAQQHEPEQYFAFER
                     SESECEAQDWKEYKKTTWDVRPWDVEVAQKESCHFLAEHLVARLTDPDVAKIPAKFIN
                     RHPYFWSDDLKLDYIQAVSEKFKSLKLANVPERVLIEMDSNDVIGRSFKTKLCTVIAS
                     VVSKYNGWEVYDVLRRIRNFKAHYYEASTAVSQVFSPEPIKILEHFSKLLTISI"
     CDS             complement(join(445356..445466,446804..446948,
                     446997..447604,447674..448093,448146..448201,
                     448527..448638))
                     /gene="Cbr-dab-1"
                     /locus_tag="CBG_00708"
                     /standard_name="CBG00708"
                     /product="Protein CBR-DAB-1"
                     /note="C. briggsae CBR-DAB-1 protein; contains similarity
                     to Pfam domain PF00640 Phosphotyrosine interaction domain
                     (PTB/PID) contains similarity to Interpro domain IPR006020
                     (Phosphotyrosine interaction domain)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN91"
                     /db_xref="InterPro:IPR006020"
                     /db_xref="InterPro:IPR011993"
                     /db_xref="InterPro:IPR028761"
                     /db_xref="UniProtKB/TrEMBL:A8WN91"
                     /protein_id="CAP21945.2"
                     /translation="MAQKSDISVETSSAATGAKPNPPSPKSRLAMLKRTKKASNASSD
                     PFRFQNNGISYKGKLIGEQDVDKARGDAMCAEAMRTAKSIIKAAGAHKTRISLQINID
                     GIKVLDEKSGAVLHNFPVSRISFIARDSSDARAFGLVYGEPGGKYKFYGIKTAQAADQ
                     AVLAIRDMFQVVFEMKKKQIEQVKQQQIQDGGAEISAKKEGGVAVADLLDLESELHQI
                     EQGVQQLSTVPTNCDAFGASPFGDPFADSFNTTATSNGTNMNISGNVSNLSGTQFGGI
                     QMPHIAQPAAHQNWPTSGTSSFDAWGQQPAMHHAHSTPAFGSNGFSETNPFASAFGAP
                     ATAPPPLPSAAPSSQQYRDPFAVSAALPSSTIDWNGTGTTKENMAPSSNTQALHHAST
                     FANFGDNSDNWTAEKKVTSLEEAFTKLVDMDALVGGQGVKETKKNPFEHILNPPKASL
                     NSLSTTCSAAQMAAQTQHTAPSRADPFGDDFFR"
     assembly_gap    445686..446074
                     /estimated_length=389
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             complement(join(<455818..455973,456021..456261,
                     456310..456892,456941..457922,457969..458175,
                     458223..459266,459269,469887..470106,470168..470222))
                     /gene="Cbr-ifg-1"
                     /locus_tag="CBG_00709"
                     /standard_name="CBG00709"
                     /product="Protein CBR-IFG-1"
                     /note="C. briggsae CBR-IFG-1 protein; contains similarity
                     to Pfam domain PF02854 MIF4G domain contains similarity to
                     Interpro domain IPR003890 (MIF4G-like, type 3)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN87"
                     /db_xref="InterPro:IPR003890"
                     /db_xref="InterPro:IPR016021"
                     /db_xref="InterPro:IPR016024"
                     /db_xref="UniProtKB/TrEMBL:A8WN87"
                     /protein_id="CAP21941.1"
                     /translation="MSNAVSRGPPGGRGKPNQNHNAGGVPDQGQQFVMPVVPQQGQGY
                     QRYQQNQMQQQGYQQPYQQQYQHQQYQQYQPHSQAPPYQQHAQPPQPLYSHQPHMYNQ
                     SYQYRAPPQQYMQDTVTFPQPSQPPMTAPAPAEKRQRKLLEIVDPNTKKAIEVTPLQT
                     PTAPVIPAVPLDPEDEKKKAELSHQLKEQVRQRFTSTNTDDGHQSKSPNLQGSGPLPN
                     FSQPPPSISSSHPVAEVVPEVTQPAPKTPDAQTKVEAGAPPAEPVTPVSSPQSSETTN
                     TTPASGTAESAVAGHEARVTPTLQKEESKEEDDDDKFDEVDRNETPDLTESQIEKTPE
                     ELEEEKAQKEAEEKEKRRIREESLEKKLEELVASGDANIEKGYFARDFMITMRALEKE
                     FARTPCPLSQQQLNDFGLDIKTMQIPQNKKTNFTPQWMPNNKGNRQQNPYRGRTTTDG
                     TGRGGQQQRDRGGHNKRPPPVRASIERIPRVTLASSKDAWKPDRQKTAEDISAEEAAV
                     KEVCKKVRSLMNKVTPTSQGPLTAEFISYNVSSNESQLTQVVGIVFDKAVEEPKFCAL
                     YAEMCKAQVTHELAKSNGKSAFRNTILTRTQSFFQDKRDIDAEKLAVIEKEEDPVKRE
                     AMLIEEKQKFRRRKFGVMAFIGYLYRNNLLSTKIVQSCSLELFASILPKKIDEKEQLL
                     NKEDFDEESIHCGLQLIETVGVILDKSKDPGPAFLDQWFKKLEDAKPLCSNKIRFMIM
                     NLNELRKDKWVPRKSVESGPKKIDEIHKDIRQEKIDNEKARDQYDRDRDRRHGGGVRQ
                     SSNSLRKQVPVSRNSLDRNRAPDQKRAQAAANTKLASSNVQPKNITLSSAIGDQSLRT
                     KTSWSGGASGGGNAAESTAAPAAAGGKAWGRRDSNDQRKKSAIDEKQASLAAAREIGN
                     MTLSARRSASQTSIPDKVDEGLTDEEKALRAKIMNSVKSDIQEVVSEDLSQQEMADSF
                     SKDYVGSAKYGNPSLTVVYEMIIRAVSEKNMKEEERKKLACVLRMSLVSDAAKQSFID
                     GVTRFCKFAIDTELYQDFPQIWNVTGEVLMNTMHVHHEVIGDSEVKTISLTDMKSAFL
                     TAKIEKRDNVMSFVLFVEVIKRWTDAEIAETGAVEALAWEFQDLPYREKMEKEGLRTE
                     MDTVKASNGKTLSSLLS"
     CDS             join(460569..460673,460727..460803,460848..461003,
                     461052..461192,461239..461314)
                     /gene="CBG00710"
                     /locus_tag="CBG_00710"
                     /standard_name="CBG00710"
                     /product="Protein CBG00710"
                     /note="contains similarity to Pfam domain PF12906
                     RING-variant domain contains similarity to Interpro domain
                     IPR011016 (Zinc finger, RING-CH-type)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN90"
                     /db_xref="InterPro:IPR011016"
                     /db_xref="InterPro:IPR013083"
                     /db_xref="UniProtKB/TrEMBL:A8WN90"
                     /protein_id="CAP21944.2"
                     /translation="MADEETLKSCKFCFGTEEDSTLSFVHPCRCRGSIHWVHNQCLGM
                     WFAKANAVQQVMCTQCQTRYQKQLTLKSWRSWWFPRLGVDMFGLLEISVDLWITWRTV
                     SGFVGMMNGTKGIFRELLLCSMWKCFVASGRRFCYYGNLGLRFASALFRVSIDDYDER
                     REIRERLPTDMDWDKISQSAVLNR"
     CDS             complement(join(462128..462982,463029..463212,
                     463259..464006,464055..464127,465271..465279))
                     /gene="CBG00712"
                     /locus_tag="CBG_00712"
                     /standard_name="CBG00712"
                     /product="Protein CBG00712"
                     /note="contains similarity to Pfam domain PF02854 MIF4G
                     domain contains similarity to Interpro domain IPR003890
                     (MIF4G-like, type 3)"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:A8WN89"
                     /db_xref="InterPro:IPR003890"
                     /db_xref="InterPro:IPR016021"
                     /db_xref="InterPro:IPR016024"
                     /db_xref="UniProtKB/TrEMBL:A8WN89"
                     /protein_id="CAP21943.1"
                     /translation="MRLAETSPQTSMSLAANNENDEERYVIEGVKNLIALSNIAKLKE
                     RENESLRKENQSLREEHAKTVELERERVIHLKNIEVLRERVEELENTRIDVNRRECGT
                     QVEVLEVSVCDVSSLTKEKISSSDDTCLREEIDKLIKCMEELSEGRRIEDLPESFRLE
                     PPPYYYSSDTFSRTVDILKTIMKGGRFLNNMINDFWCSLIQRAEQIELVIKDKTEKSK
                     KLAGDEIIRLDIIHAKEKKAFRTKLQETERNLSSSLRELEEYKKLTANEAARSQSDSQ
                     LTTGSEIPSSTINEHQKRFDKQPPPMGESAQRIVTLASSKDAWKPDRQKTAEDISAEE
                     AAVKEVCKKVRSLMNKVTPTSQGPLTAEFISYNVSSNESQLTQVVGIVFDKAVEEPKF
                     CALYTEMCKAQVIHELAKSMGKSAFRNTILTRTQSFFQDKRDIDAEKLAIIEKEEDPV
                     KREAMLIEEKQKFRRRKFGVVAFIGYLYRNNLLSAKHVHSCSLELFASILPKKIDEKE
                     QLLNKKDFDEESIHCGLQLIETVGVILDNSKDPGPALLDQWFKKFEDAKPLCSNKIRF
                     MIMNLNELRKDKWVPRKSVESGPKKIDEIHKDIRQEKIDNEKGLFWRKRGYCIFDN"
     CDS             join(466787..466885,467091..467442,467496..467638,
                     468060..468215,468491..468760,468925..469056)
                     /gene="Cbr-twk-3"
                     /locus_tag="CBG_00713"
                     /standard_name="CBG00713"
                     /product="Protein CBR-TWK-3"
                     /note="C. briggsae CBR-TWK-3 protein; contains similarity
                     to Pfam domain PF07885 Ion channel contains similarity to
                     Interpro domains IPR003280 (Two pore domain potassium
                     channel), IPR013099 (Ion transport 2)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN88"
                     /db_xref="InterPro:IPR003280"
                     /db_xref="InterPro:IPR013099"
                     /db_xref="UniProtKB/TrEMBL:A8WN88"
                     /protein_id="CAP21942.2"
                     /translation="MTVSLEENAKIQMLSAASKDKKSTTERSLIEKYHLGPLALHTGL
                     VVSCVTYAVGGAYLFLSIERPEEMKRRAKAIFKFQELKDQFLGNLSALQPETDRILET
                     YTKKLMYMLEDAHNAHAFEHFIIPNGVPKDMWSFSSALVFTTTTVIPVGYGYIFPVSA
                     YGRICLVAYALLGIPLTLVTMADTGKFAAQLVTRWFGENMAIPAAIFVCLLFAYPLVV
                     GWILCSTSSITFLDSVYFSLTSIFTIGFGDLTPDMNVIHMVVFLAVGVILVTITLDIV
                     AAEMIDRVHYMGRHVGKAKQLAGKMFQLAQSLNMKQGLVSGVGQLHALARFGMLVGKD
                     DVEKTVPEDGVIAFSPDVMDGLDFVDNLSIYSRRSRHSAGNSARNLFLS"
     CDS             join(471939..471994,472265..472489,472555..473386)
                     /gene="CBG00714"
                     /locus_tag="CBG_00714"
                     /standard_name="CBG00714"
                     /product="Protein CBG00714"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WN86"
                     /protein_id="CAP21940.1"
                     /translation="MLATVVAKEPIVEKYCFFTTSWNLKCIKFCNLEIPEFRSIRNSE
                     SPNVMIPASQNLRIIETRNLRISETQIPRISESQNLRISESQNLRISESQISESQNCR
                     NSESQNLRISEFQNLRISESQNLRISKLQKFRISESQNLRISESQNLRISESQNLRIS
                     ESQNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRISES
                     QNLRISESQNLRISESQNLRILESQNLRISESQNLRISESQNLRISESQNLRISESQN
                     LRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLRISESQNLR
                     ISESQNLRISESQNLRISESQNLRISESQNLRISES"
     CDS             join(473827..473970,474491..474619)
                     /gene="CBG00715"
                     /locus_tag="CBG_00715"
                     /standard_name="CBG00715"
                     /product="Protein CBG00715"
                     /note="Predicted"
                     /db_xref="GOA:A8WN85"
                     /db_xref="UniProtKB/TrEMBL:A8WN85"
                     /protein_id="CAP21939.1"
                     /translation="MTLSPETLLVVLAIAMCSLLLLFSIAVVIVFHCCKVESLHNLPH
                     AVLERTRHSVNWARHSVFSHSNDDFDEEMCGDTLHRQFLQPPPTAV"
     CDS             complement(join(475489..475641,475972..476267,
                     476356..476777,479792..480212,480549..480642,
                     480728..480880))
                     /gene="Cbr-col-76"
                     /locus_tag="CBG_00716"
                     /standard_name="CBG00716"
                     /product="Protein CBR-COL-76"
                     /note="C. briggsae CBR-COL-76 protein; contains similarity
                     to Pfam domains PF01484 (Nematode cuticle collagen
                     N-terminal domain) , PF01391 (Collagen triple helix repeat
                     (20 copies)) (3)contains similarity to Interpro domains
                     IPR002486 (Nematode cuticle collagen, N-terminal),
                     IPR008160 (Collagen triple helix repeat)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN84"
                     /db_xref="InterPro:IPR002486"
                     /db_xref="InterPro:IPR008160"
                     /db_xref="UniProtKB/TrEMBL:A8WN84"
                     /protein_id="CAP21938.2"
                     /translation="MLIPQSSQSMLVASTIISTFAFLATITILPIFFMKVQRINSQML
                     TDLRNCHQDSSDIWKQLSHKSVREKRSYGGQNSIPSGKCCSCQQGKPGAMGPKGSDGA
                     PGSPGIIGLNGRNGRNGKYVASEAHNEPACQKCPVAPPGPPGHPGRKGLRGQSGNAGT
                     AGKNGIPGRMGPPGPPGVRGPPGELGMQGPQGDPGKVLNGAPQGQPGRPGKVGPRGKG
                     GHTGSPFTSQANPVSSFRDGRPGLEGIAGARGVQGERGSRGARGPPGPPGPSGTDGRK
                     GSCSHCQSDDKPHRGAPQEEPNPEGEYSEQQPVESIEPVPQRRPAPVPTTTTTEAAPV
                     YTDPVTQEPVRHRAYPAAAPPSSYNTGNSEVVPKTINYPDTINQPNYKHDGDVSGAAG
                     TSDDSEDVNVIPAGQYSSRQYASKTNKIGKAIHFGYSNDQLSAFKPMGGGADEEEEIE
                     GYGQPRAFQTNKGYNVQIMGSSPTNNNPTYQAAPVGTAWKQPENHKNRHYTPQYLPPP
                     AYIL"
     CDS             complement(join(483341..483423,483471..483639,
                     484145..484596,484616..484769,484783..484930,
                     485005..487091,487339..487408,487474..487589,
                     487902..488064,488495..488661,488943..489035))
                     /gene="Cbr-qua-1"
                     /locus_tag="CBG_00717"
                     /standard_name="CBG00717"
                     /product="Protein CBR-QUA-1"
                     /note="C. briggsae CBR-QUA-1 protein; contains similarity
                     to Pfam domain PF01079 Hint module contains similarity to
                     Interpro domains IPR003586 (Hint domain C-terminal),
                     IPR001657 (Hedgehog protein), IPR003587 (Hint domain
                     N-terminal), IPR001767 (Hint domain)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN83"
                     /db_xref="InterPro:IPR001657"
                     /db_xref="InterPro:IPR001767"
                     /db_xref="InterPro:IPR003586"
                     /db_xref="InterPro:IPR003587"
                     /db_xref="InterPro:IPR006141"
                     /db_xref="InterPro:IPR036844"
                     /db_xref="UniProtKB/TrEMBL:A8WN83"
                     /protein_id="CAP21937.2"
                     /translation="MRRLCAILPILLLSNFWPTVDGLNYKCHNDQVLVVQSFGNDTIR
                     MHCQRLDLCGYQKLKCDYDELQPQCGGKLNFVAHVNQKGSTAPVEHTCCNLFNPRSHG
                     SIPTHIGNDCFIYELPDGSSNGKKVDPAPADDAPYAVLKNPAEIPEQFDGVTGYRLRL
                     FLLKNKSPPTLLVKGIERRLEGYRVTICRPRCTSYDKVVNDNEFPNFRIPKFSSSQMS
                     YSHHKSNFQGTPESEWKAISWSSWSSSSWSTWARHAFNKAAAESGGSADRIRTRMPIG
                     EKATAAGVPTGAAGSDKNNINIHVESNGNNNNSFGGNGSGEKNGSGENGLNREGSGAN
                     GGAGADGAGAGRSGAGAGADGAAGAGAGTHGNINITVHTDGKSGGNAVAVANANVTVN
                     GANGKVDTTGTGASGNGAAGGNGGNGGHGDSGDSRDAKKDKDHGKGKGKGDGDGDSDG
                     GAGNGSGNGSGKDKGDGNGDSDGNGNGSGGSGGSGDKKPKPAGEWDDGDGDDDESGKG
                     TGSNEAGNGKGGDGDGDGSKGAGGSGGKPDGNIKINIHSPDDNDLLEKDENGPGGNGK
                     GDGDKDGGAGGAGGSDKDGGDGNGGSDKDGGAGGDGNGDKDGNGNGNGNGLTDGGDGN
                     GGSKNGPRDNDGNGDGNKETGAGGNGNGDENGNGAGAGGNGNGDGNGGSNRPNGNGAG
                     GDGNGTEAREGGDGNGGSNGGSNGSGDKGAGAGGKGKGDGSVGDKYDKGSGGAGGDKD
                     GKGAGGSGADKDGNGGNGKSNKGDKDGNGKGSDKDKNGKDGAGKAGNGDKDGKGGKKD
                     DSGKDGAGSGKDKDAGKGKGAGDKDKKGGAGAGGKGAGGAGAGGKGAGAGAAAAGKGT
                     GGGDDDDDVDVTDVEVGTKPLTGNTLKELLAKLPNETADKDLGNGDELTNASLNRNQH
                     AEGSTGTAPGTSAAAASAPDTTGGTGGTGTTANAVGQPDQEQRHLEPQRADRLDPQEA
                     PDPQEAPDPQEADPQARELLPHSSKISTAAAADAVAADAAGGGGAGGGGRSNCFSADS
                     LVTTVTGQKRMDELQIGDYVLVPSAGNVLKYERVEMFYHREPKTRTNFVVIFTKSGKK
                     LSLTGRHLLPVAECSQVEKYTMNPDGIDAAMRESKYAEKAKKGECVLSIDASGDVIAD
                     EIVRIGRMTSTGIYSPMTVEGSLIVDGVLSSCFSHLESHSAHKLIFDFLYYVYHAFGL
                     LNTNHVELQPIPTFVSFAQYLSKTVLPFS"
     CDS             join(499267..499279,499326..499492,499543..499694,
                     500551..500746,500790..500910,501104..501204)
                     /gene="CBG00719"
                     /locus_tag="CBG_00719"
                     /standard_name="CBG00719"
                     /product="Protein CBG00719"
                     /note="Predicted"
                     /db_xref="GOA:A8WN82"
                     /db_xref="UniProtKB/TrEMBL:A8WN82"
                     /protein_id="CAP21936.2"
                     /translation="MTRQKSLKTMIISNSINFLGLLLVLGVTFGVYNSISNPTDENFQ
                     KEFLSVLESKSEKGMKTLHKYQQATKCCGVPLSSDISWNQTSISLGNPWASWYYYTML
                     DEDYIDETRRLFTLPWSCCSDRTLECEHLAFERFPFSKVFPLFNPPILHHFRVSIEPS
                     SKNVIIDELVVVEHRLRKARRSEDARQSVYENSCEPPTKILLAGVPMQLLGVGAGFAL
                     LTLSAIGLDGFFIWKFYKSQQENYNFPLIRK"
     CDS             join(503983..504087,504772..504900,506013..506129,
                     506229..506345,506707..507012,507058..507177,
                     507227..507448)
                     /gene="CBG00720"
                     /locus_tag="CBG_00720"
                     /standard_name="CBG00720"
                     /product="Protein CBG00720"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WN80"
                     /protein_id="CAP21935.1"
                     /translation="MDHNEMITRIGEEIKNAGVDFNLDDPFDDPSLCTTAFMDILWQD
                     EHGNSALMLASAENRVQQVKGILIMAINSGKLWQVIDMRNKERLNCVDMAIRAGSETC
                     AMLITKVAREYAKHRPRSETEKKFDTMPTNEEDVTFTLLSSKNAEQFDDNYVKELVRQ
                     SSTASGHAGANKQKLNREKLSNSLAKSTAAASAGREYLKMVKRSSSAHSRLMSQRTFS
                     VESGSIDSSEPSTPQMTSPPADHGVLSSVGERIRNIFGKKPPLHTKSLSVVQTDRVAS
                     PSVRSSSVSSKPLNYQPSSNTEEDNIRLPQHSSSNDSPTTSEGPSGMFRWGSKAQPLS
                     SATPTTVNGIRLPPLNLRRRGSDQKNRDFHSLGGDDE"
     CDS             complement(join(507729..507918,507964..508620,
                     508669..508974,509020..509443,509489..509564))
                     /gene="Cbr-cct-1"
                     /locus_tag="CBG_00721"
                     /standard_name="CBG00721"
                     /product="Protein CBR-CCT-1"
                     /note="C. briggsae CBR-CCT-1 protein; contains similarity
                     to Pfam domain PF00118 TCP-1/cpn60 chaperonin family
                     contains similarity to Interpro domains IPR017998
                     (Chaperone, tailless complex polypeptide 1), IPR002194
                     (Chaperonin TCP-1, conserved site), IPR001844 (Chaperonin
                     Cpn60), IPR002423 (Chaperonin Cpn60/TCP-1), IPR012715
                     (T-complex protein 1, alpha subunit)"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:A8WN79"
                     /db_xref="InterPro:IPR002194"
                     /db_xref="InterPro:IPR002423"
                     /db_xref="InterPro:IPR012715"
                     /db_xref="InterPro:IPR017998"
                     /db_xref="InterPro:IPR027409"
                     /db_xref="InterPro:IPR027410"
                     /db_xref="InterPro:IPR027413"
                     /db_xref="UniProtKB/TrEMBL:A8WN79"
                     /protein_id="CAP21934.1"
                     /translation="MASAGESILALTGKRTTGQSIRSQNVTAAVAIANIVKSSLGPVG
                     LDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAA
                     ELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTSDSIGRQSIVNAAKTSM
                     SSKIIGPDADFFGELVVEAAEAVKVENNGKVTYPINAVNVLKAHGKSARESVLVKGYA
                     LNCTVASQAMPLRVQNAKIACLDFSLQKAKMHLGISVVVEDPAKLEAIRREEFDITKR
                     RIEKILKAGATVVLTTGGIDDLCLKQFVEAGAMAVRRCKKSDLKRIAKATGATLTVSL
                     ATLEGDEAFDASLLGHADEVVQERISDDELILIKGPKSRTASSIILRGANDVMLDEME
                     RSVHDSLCVVRRVLESKKLVAGGGAVETSLSLFLETFAQTLSSREQLAVAEFASALLV
                     IPKVLASNAARDSTDLVTKLRAYHSKAQLIPQLQHLKWAGLDLEAGNIRDNKEAGILE
                     PALSKVKSLKFATEAAITILRIDDLIKLDKQEPAGGHDDCHA"
     CDS             join(510011..510049,510076..510245,510293..510522,
                     510569..511169,511217..512070,512127..512206)
                     /gene="Cbr-mig-5"
                     /locus_tag="CBG_00722"
                     /standard_name="CBG00722"
                     /product="Protein CBR-MIG-5"
                     /note="C. briggsae CBR-MIG-5 protein; contains similarity
                     to Pfam domains PF00778 (DIX domain) , PF00610 (Domain
                     found in Dishevelled, Egl-10, and Pleckstrin (DEP)) ,
                     PF00595 (PDZ domain (Also known as DHR or GLGF)) contains
                     similarity to Interpro domains IPR001158 (DIX), IPR001478
                     (PDZ/DHR/GLGF), IPR015506 (Dishevelled-related protein),
                     IPR000591 (DEP domain)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN78"
                     /db_xref="InterPro:IPR000591"
                     /db_xref="InterPro:IPR001158"
                     /db_xref="InterPro:IPR001478"
                     /db_xref="InterPro:IPR015506"
                     /db_xref="InterPro:IPR029071"
                     /db_xref="InterPro:IPR036034"
                     /db_xref="InterPro:IPR036388"
                     /db_xref="InterPro:IPR036390"
                     /db_xref="InterPro:IPR038207"
                     /db_xref="UniProtKB/TrEMBL:A8WN78"
                     /protein_id="CAP21933.2"
                     /translation="MEPPCSSDSNQIKSKQDGFQVFYYLDDETTPYVSVIDAREGVAT
                     LGNFKNSFTKRGYKYYAKELDPDIQREVKVELISDTDRLRRSQNGFYEVFLVSTPGYG
                     TLPRNTGTMTRPQRAAIDKRRRRSADFDATPYSDASLAPSTIVSRRAGEHLAEMYTSN
                     SEDPYQYDESTRRTTDDSSMYEPLTARDMNRYHDDDRRKKKQKKDRFRRPYVPSTISS
                     ATESSVNSGLPRILEIYLSMKNVPYLGLSVCTMDGHIFVSEIAPEGAVEKDGRVNVGD
                     QILQVNRVSFEDLTGPQAVRALREAAGSKRPITLYISKYRRAAPSEYDDPLASMASET
                     MPLDVGVWVETAVQATEKMKALGIDPQEQTMTSVDDGTMPFTSTASDDEERILYDQRR
                     NGIPRALLEEAERKKENERNEKAEQLTELIDPIIVVRAMARPDSGLVIKNRKWLKISV
                     PMSFIGQDLIDWLVDHMTDIHNRKRAKLYAARLLAAGLIRHVVSKLTFTEKCYYVFGD
                     GILPTDRTSADNSGTSGTTTTRVEATTEVTYVGSPAPHALANRMGRTIPPHRLETTTL
                     SPVAHDQTWLRRRRDCESPMTNDYASMVGESQIGMNPAGNYYGAKNSRQMMVPASSQV
                     TSSSLTNGSGGIGGPPPTPLSSTMVLAASPIQS"
     CDS             complement(512400..512621)
                     /gene="Cbr-dylt-3"
                     /locus_tag="CBG_00723"
                     /standard_name="CBG00723"
                     /product="Protein CBR-DYLT-3"
                     /note="C. briggsae CBR-DYLT-3 protein; contains similarity
                     to Interpro domain IPR005334 (Tctex-1)"
                     /note="Predicted"
                     /db_xref="InterPro:IPR005334"
                     /db_xref="InterPro:IPR038586"
                     /db_xref="UniProtKB/TrEMBL:A8WN77"
                     /protein_id="CAP21932.2"
                     /translation="MIQKISKALTKGDETRKLLIHCTICSRTDELSICSANMCSWDTS
                     KDVAVYSEWTSKTVFGAVQVFFITHRYSK"
     CDS             join(514591..514616,514662..514714,516695..516941,
                     516988..517136,517334..517430,517476..517686)
                     /gene="CBG25495"
                     /locus_tag="CBG_25495"
                     /standard_name="CBG25495"
                     /product="Protein CBG25495"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:B6IEN5"
                     /protein_id="CAR98365.1"
                     /translation="MQSAIGHILNYIRDYHLDIRTGSLESLFICAVILIDSSESYDAD
                     LEGLVKKTPPGNSGVLRNCSSDQVKSIDKCYLEMFNHNLLNVTSLPKANEDPFRMFRL
                     DATGMCRYYSTFSRCVRDMDCLNYNTVEAIFHNELDSSYYLSQTAFLQFYCEHGSDFV
                     FYYDCLEIIDLDELSDTVFNECSVLEVGTCNSVKITTQCERSVFLNYCGHTSAMSYCQ
                     YIKVMERMTGWGHCEYMPCINSGYSRKLFFLLIYFALELLLL"
     CDS             join(518284..518403,519300..519398,520167..520331,
                     520384..520545,520662..520769,520890..521540,
                     522023..522283,522330..522713,523345..523425)
                     /gene="CBG00724"
                     /locus_tag="CBG_00724"
                     /standard_name="CBG00724"
                     /product="Protein CBG00724"
                     /note="Predicted"
                     /db_xref="GOA:A8WN76"
                     /db_xref="UniProtKB/TrEMBL:A8WN76"
                     /protein_id="CAP21931.2"
                     /translation="MFVSGVGCEPTNLLAFRGNKKTEIASWRWRKMESAIETDSTYYV
                     LMASYILNALTLRHDHDAAERTLHHFWDTKDLLDTGLFEEHITSQPLLAASLFSLIAC
                     SIGLIVFAIIFLICRFRGQCGSQKYQEYPSNATNYAIYLMLFFISWLIVTSASAYFVL
                     AGIGFWSEKLDARKPFTNASLVRLSRSTIGDLYASYDYHGDFENVSEAPRKSLKRIHI
                     HRKPLLHTFRKRIEIPIRPLAEVTFTGTSDKFITKNRPILDLNSNQNDGSEEDKIDEF
                     ESFKRLQNLPEPSLPTEEEIKNQVQEHSGIPGIAEIFGNSEDPEDVADNSEEAETSEN
                     QSLVVTGGTMTIEEEDSEDVESEESTTTTTTITMTTTTTVPITTVPTTTASTTKSTTT
                     VAPTMETTKTTTTTTKTTTTASPSTISAIFPEVTWTQIEETNSDDVLDQLLTHAETHP
                     DVPADNSLSYNPNLTYFSLHSRFLVFVCRLTFCFVALALLFVILPTFFLVVAGTGCYI
                     YSDHPMNRSSVSNKIGQVVSINASILLFMSPCMLIFSSFTLFYTHCHELLCATIQLQN
                     QQARGIIDTNHQSLIENYSINTNQCARSLAPVQSLLLSSLLLCISLLPCVFAMFKLVK
                     YYFRMSSEFYWNAADNFAGRQFSKQQDFPRYQSTVIYPDDDMTAGYAVYGQI"
     CDS             join(524009..524155,525434..525621,525704..525893)
                     /gene="CBG00725"
                     /locus_tag="CBG_00725"
                     /standard_name="CBG00725"
                     /product="Protein CBG00725"
                     /note="contains similarity to Interpro domain IPR001283
                     (Allergen V5/Tpx-1-related)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN75"
                     /db_xref="InterPro:IPR001283"
                     /db_xref="InterPro:IPR014044"
                     /db_xref="InterPro:IPR035940"
                     /db_xref="UniProtKB/TrEMBL:A8WN75"
                     /protein_id="CAP21930.2"
                     /translation="MNRLRWNSQYGDVASKRAERHSEDCELVHHSGHYTENIWQGGVT
                     NPAEEGLAAIAAFAGEFQKGVWDLKWSPDMGHAANMARGDLESVGCGYTRCTKDGFEL
                     SIVLCLYYPPAGEPAYKKGQTCSECSDGFSCEKKIGLCLDRNATEIDTRGEDTSGSPS
                     MSMLFLVIWTISMI"
     assembly_gap    524682..524962
                     /estimated_length=281
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             join(526729..526827,526874..527008,527051..527120,
                     527315..527369,527413..527515,527570..527681,
                     527729..527860,528346..528525,528575..528661,
                     529427..529536,529593..529785,530228..530340,
                     530386..530460,531250..531348)
                     /gene="Cbr-acr-14"
                     /locus_tag="CBG_00726"
                     /standard_name="CBG00726"
                     /product="Protein CBR-ACR-14"
                     /note="C. briggsae CBR-ACR-14 protein; contains similarity
                     to Pfam domains PF02931 (Neurotransmitter-gated
                     ion-channel ligand binding domain) , PF02932
                     (Neurotransmitter-gated ion-channel transmembrane region)
                     contains similarity to Interpro domains IPR002394
                     (Nicotinic acetylcholine receptor), IPR018000
                     (Neurotransmitter-gated ion-channel, conserved site),
                     IPR006201 (Neurotransmitter-gated ion-channel), IPR006202
                     (Neurotransmitter-gated ion-channel ligand-binding),
                     IPR006029 (Neurotransmitter-gated ion-channel
                     transmembrane domain)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN74"
                     /db_xref="InterPro:IPR002394"
                     /db_xref="InterPro:IPR006029"
                     /db_xref="InterPro:IPR006201"
                     /db_xref="InterPro:IPR006202"
                     /db_xref="InterPro:IPR018000"
                     /db_xref="InterPro:IPR036719"
                     /db_xref="InterPro:IPR036734"
                     /db_xref="UniProtKB/TrEMBL:A8WN74"
                     /protein_id="CAP21929.2"
                     /translation="MGFMSLRFLFAFYVFYDVRASVDEYRLLQYLKENYDSFERPVEN
                     SSAPLDVQVRFLLNQILDIDEKNQVMSILAYMDYHWNDYKLKWDPKMFGGIRDVRFSG
                     DDDASFKLWRPDVLLFNSVSESFDSTYSSRFIVSSNGDVQQNPPGIFRFICQIDVTYY
                     PFDRQTCFLKLGSWTYNGQYINLDFLLREIIGLHGKPIIVEPERSSTNSASYFVNESI
                     DLQVYLQNGEWDLEGTPGKRVVQKFGTDEYHELYFYIHIRRRTLAYGINLIIPSLVIS
                     MMTILGFTLPPDACEKITLETTVLLSVIFFLQMVSNTSPPQSQSVPILAAFFSCCLML
                     VACSCVFTVLTLSLHHRKPETHEMSPTMRKIFIDWLPYILCMCKPDHPKTPKPKVLGK
                     SIAPIHRLSTIPMLNLPRVSQTQFPDRSVFVYHEVPAIIKNTSRICSELLIIEKDIEK
                     MVNKIEEDSKEEMLRSEWRFAAMAVDRLCLYVFSAFITNAPKIAVSRFPKTTPPTTFY
                     FPETKKKTRKNS"
     assembly_gap    537144..537245
                     /estimated_length=102
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    538511..539510
                     /estimated_length=1000
                     /gap_type="between scaffolds"
     CDS             complement(join(542772..542828,543193..543336))
                     /gene="CBG25494"
                     /locus_tag="CBG_25494"
                     /standard_name="CBG25494"
                     /product="Protein CBG25494"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:B6IEN4"
                     /protein_id="CAR98364.1"
                     /translation="MTHRRCGVMGRDLYHSKEDEISFSNICSVFAAASANSRNLGQKF
                     SVDFPEVFKVRFLKYFQYQIGF"
     CDS             join(547920..547924,549495..549672,550289..550693)
                     /gene="CBG00729"
                     /locus_tag="CBG_00729"
                     /standard_name="CBG00729"
                     /product="Protein CBG00729"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WN73"
                     /protein_id="CAP21928.2"
                     /translation="MLFSVLFKTEPEGSSRFEFSYYDVTLKKIDVQSVGNQIEIPETP
                     KVLGSCRENNRKILRVKKIIFFSILDSHYKRHNNLQNRRPVIRRPFDSSLHKVRILIP
                     QSVACCLIRALFLSNADLDAYTSVSTRFVTSSRIASKRLLEVFDLSSTPPPIATSATP
                     PTTDPNKWSKFTLGKNPTVSSTPLNRNPKAHGPMR"
     CDS             complement(join(551004..551201,551246..552725,
                     552773..553460,553505..555405,555466..555579,
                     555681..555916,555966..556130,556133..556424,
                     556486..556659,556711..>556763))
                     /codon_start=1
                     /gene="Cbr-rrf-3"
                     /locus_tag="CBG_00730"
                     /standard_name="CBG00730"
                     /product="Protein CBR-RRF-3"
                     /note="C. briggsae CBR-RRF-3 protein; contains similarity
                     to Pfam domain PF05183 RNA dependent RNA polymerase
                     contains similarity to Interpro domain IPR007855
                     (RNA-dependent RNA polymerase, eukaryotic-type)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN72"
                     /db_xref="InterPro:IPR007855"
                     /db_xref="UniProtKB/TrEMBL:A8WN72"
                     /protein_id="CAP21927.1"
                     /translation="NGESSEEAITVIRPRHPRGVPQSQSQFPRGRSNFSSGTLPYRRS
                     ESTPVNTLATGHSNKQLLTTYKIDRASGSRQRMDSDYLDPSTSSAFPSNPPSARLNNL
                     SLPVNRGYLQDYHLYPQRPSHYNNQRYNNNHNDGNTKRHSLPSTHILYEKTKHRGGPN
                     VEEQEKVIRMLRAAEESEALAKPAVVKKAPIELSLDVKITGSMNNEMFGYCRTHMETM
                     KEFFSGKLKESNIDEVNWMKTGMAPRAAYEDKAYVIEAHLILTPSVAAFDKNDLFAQC
                     ITKFTRKTKGMLQDQCFLEVPKMHQFFPKITPQHVDINVSAIGLGNCINPGLFLIRGD
                     YISNDNTVCSVKLQSQHNPSDASREFNSYKVAGSSKYLSFARFEHDKRVALLYFGVRL
                     SEFADDGLDHAGFRLNLYYNTFVRIVVDLSAVNTNSIYIQLKNPPQLWEGIPKSTMFH
                     PSKSKVLNLETCTEWIRVLSWPGDAERRGIGCTPEAFYQSNWIRIMFRKETDDEKLCS
                     ANLIDVVTRLASRSNAKVSFGHIFSIRRQLAPSPCLASLGSFRANYALQALITRGSVF
                     MDQLFDCTDTNIPDPLEPEDEEGEGELLKQPMNLKDEPMFLKIVRRAMRECPQAAEES
                     LEQLLNAFDERRSIDVIFAFSTMYKTRKVQYERLLNGESLQDVGLARPLPKNCVSVAK
                     VIVSPSRVLLMAPEVMMVNRVVRRFGPDYALRCVFRDDNLGRLAIRDFSINNIDHMSN
                     VVTEAIYNTLKNGIQVADRHYSFLGWSNSQMRDQGCYLYAPRVDPISGKVSGTVEDIR
                     VWMGDFREAVSVPKMMSRMGQCFTQAQPTVKLARHHWLVEPDMEGGPGNKFCFSDGCG
                     RISYKLAGQITRKLKLKEIPACFQVRFKGFKGILVIDPTIDDIINMPKVIFRKSQQKF
                     GEGGGDQQDESLEVVKYAMPSPVCLNRPFVTILDQVSKKQSAKCHQRITNRVHYYLER
                     ELSSLSNMLLNENQAAEELVNRTNLPIDWNLASKRAGFQLSVDPLIRSMLFAIYRYNI
                     IHHISKAKIFLPPSLGRSMYGVVDETGLLQYGQVFIQYSPTIRQTSPEPLLKTGKVLI
                     TKNPCHVPGDVRVFDAVWQPALAHLVDVVVFPRHGPRPHPDEMAGSDLDGDEYSIIWD
                     QEMLLDYNETAMVFPSSQAQEEDKEPTTDDMVEFFLRYMQQDSIGRMSNAHLVYADLH
                     GLFSENCASIAQKCAVAVDFPKSGVPAEPLTGFEQCDVTPDYMMSGGKPMYYSASLNG
                     QLHRKARKVEEVLEEYESKGSIFEGEYDKMICPDDADVFFGSEPKLVQTMNIRDEYID
                     RMQQLLDEYGIEDEASVVSGHAASIKRLAGMERDDYSFYHTDKVVELRYEKLYSVFRA
                     KFFEEFGGEEAHTVNDGKGSRVVCIPAMHEKVRQWYFAAYVQPKKNKTGKYIGQSLPW
                     VAWDVLCDLRRTLMLQIDDAIPRVKYPIAARLEEEMEKSIESHKEKFEALKKQLATKK
                     EAHFMRRYQHFYGPQIIKMLFIIQQWLEREKVLPSKSLTIWQVGRLLVRFGLGALGGN
                     PTIDYEKSILAPAVVFKKWITKKAGGDEEPIMSRFEMGSMMIEFLRYMASQSFALANQ
                     ISLRVFKEMEIVEPSLLYSYQWTPMHNVAYRTFHSISVSGRFDALRLDDDGAEEQVSE
                     SKDPILVNESLFSNRNYSDTTPITRPRIFGALKDWSGVKEIISREITGTRKTDLVYVT
                     SVGTVLARQRLARLLLLSGEAIRDAIVNNVVPPEVRDDFI"
     CDS             join(557016..557110,557159..557263,557311..558215,
                     558260..558626,558671..559208)
                     /gene="Cbr-emb-27"
                     /locus_tag="CBG_00731"
                     /standard_name="CBG00731"
                     /product="Protein CBR-EMB-27"
                     /note="C. briggsae CBR-EMB-27 protein; contains similarity
                     to Pfam domains PF07719 (Tetratricopeptide repeat) ,
                     PF00515 (Tetratricopeptide repeat) contains similarity to
                     Interpro domains IPR001440 (Tetratricopeptide TPR-1),
                     IPR013105 (Tetratricopeptide TPR2), IPR019734
                     (Tetratricopeptide repeat)"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:A8WN71"
                     /db_xref="InterPro:IPR011990"
                     /db_xref="InterPro:IPR013026"
                     /db_xref="InterPro:IPR019734"
                     /db_xref="UniProtKB/TrEMBL:A8WN71"
                     /protein_id="CAP21926.1"
                     /translation="MNTTDNDGFAIPSLSGEGPSSSSSTKKPVASLDLPKHESLRFKP
                     IKTLASRIDGSEYYDEASIEKVLEMLEIGRIDDATACADSLYAGIIDDDTLDIVGIAE
                     YVKLLVVLRQWRRVSHLVSRKNYYQIHVVFAYYAVTALFHRKMYEEVTELAVGHLLPN
                     NGQHGLLPVRTLSQVTGRFVEEEKTKYSFANMAELDNISKKLRMLPALMLTIAESFLK
                     LMNRDAAMICINYALSVDNTTLHIERLMTKYNLVEPAQWEHYKKVRNAQLKLHEGSHD
                     PQILIERAQHAYEMGRFGEAKRLTSELFELFGPHPEAILLRIHCLTMLKDSRSLLQLG
                     HQLVADDPYVPLPWYCVALYYYTIGANARARNFISKCTMMDTTFAEGWVAFGHILHYE
                     VEHEQSMSCYYRASKLVDRSSEPFLYVSLQYSTHSQKLSKKFMMEAVSRAPNDPVIRH
                     EEACVAYTAKIYCEADVLFRNVLYMVTDTSEDAPIEETLKKPIDDFWRPMLNNLGHIS
                     RRMGRVEEAILFYQKAIKMEPKYIDAIASTALCYAVLGETDRATEFFNRALSIDPFNE
                     TIRQCLAKMIVASKLKYKTDERAMPSTFNVERFEPQGVLPNCGMRRPRNDGFVVPSII
                     SSQQPFMQMFRARVRADQAEQRRLQGRTTRTEREIIDEDHEDQNR"
     CDS             complement(join(559367..559564,559648..560650,
                     560705..560769))
                     /gene="Cbr-pch-2"
                     /locus_tag="CBG_00732"
                     /standard_name="CBG00732"
                     /product="Protein CBR-PCH-2"
                     /note="C. briggsae CBR-PCH-2 protein; contains similarity
                     to Pfam domains PF00004 (ATPase family associated with
                     various cellular activities (AAA)) , PF02367
                     (Uncharacterised P-loop hydrolase UPF0079) contains
                     similarity to Interpro domains IPR003959 (ATPase,
                     AAA-type, core), IPR003442 (Uncharacterised domain
                     UPF0079, ATPase bacteria), IPR003960 (ATPase, AAA-type,
                     conserved site), IPR003593 (ATPase, AAA+ type, core)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN70"
                     /db_xref="InterPro:IPR003593"
                     /db_xref="InterPro:IPR003959"
                     /db_xref="InterPro:IPR003960"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="UniProtKB/TrEMBL:A8WN70"
                     /protein_id="CAP21925.1"
                     /translation="MKESAKKTLKNLQVEVRLNQKFPKSVVQSKIPEFEELIKANLEK
                     ARNWKPISVTSESSPITELFEKLVIGSCQLKDGESLSNLLDFSLDASNIHVYKLHKDG
                     PLSQQIGEDDNEESIIGSQLWQLPCVEFDSIWENLIYDSNLKNEVMSYVSALVSLSEK
                     RVNITIINVNRLILLTGPPGTGKTSLCKGLAQHLSISMNNRYSKSVMMEINSHSLFSK
                     WFSESGKLIQKMFDQIDELAEDENCMVFVLIDEVESLGMCRESSSSRSEPSDAIRAVN
                     ALLTQIDRIRRRHNVLILCTSNLENTLDKALVDRADIVRNVGQPSDYARYSILKACIF
                     ELARIGKVVEEDAGAMPQDIQNTDAFMNPHSQSLLEIAKEARGLSGRAISMLPTLVYA
                     NSLGATISLDECMELFREAVKERLNRNSV"
     CDS             complement(join(561178..561315,561511..561771,
                     561822..561950,561995..562150,562208..562451,
                     562845..563009,563058..563308,564327..564503,
                     564846..565203,565248..565446,566330..566423))
                     /gene="Cbr-ltd-1"
                     /locus_tag="CBG_00733"
                     /standard_name="CBG00733"
                     /product="Protein CBR-LTD-1"
                     /note="C. briggsae CBR-LTD-1 protein; contains similarity
                     to Pfam domain PF00412 LIM domain contains similarity to
                     Interpro domains IPR013998 (Nebulin), IPR002931
                     (Transglutaminase-like), IPR001781 (Zinc finger,
                     LIM-type)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN69"
                     /db_xref="InterPro:IPR001781"
                     /db_xref="InterPro:IPR002931"
                     /db_xref="InterPro:IPR038765"
                     /db_xref="UniProtKB/TrEMBL:A8WN69"
                     /protein_id="CAP21924.1"
                     /translation="MNSKQHCNRCGKQVYPTDKVGPLKDSTFFHQGCFKCYICGTRLA
                     LKTYCNNRNDINDKEVYCSNHVPIAGPHDLPMASTNGSGKHLENNNHVKNGNWIDAGL
                     SDMKIAHAMKATQVARPYPKISHEGAKYVVDYDAQTRLELLHRKDEDELYEEFQDKRN
                     REAEQFEKENTEEWERALAEFAKKYEKGQANMKKDDLIRQLTIKREKKLETLHTKRKE
                     RERHQTAELVDRQAKEMLELFKASRSEYSNLQYPSTPPPPVPPSCSKREIYTTTDYFS
                     TIDEVAIHCARNEVASFTDLIRTLSSGARSDVDVARAIYRWITIKNLNTMIFDDSIQS
                     DTPMGLLRGIKYGTESYHVLFKRLCSYAGLHCVVIKGFSKSAGYQPGYSFDDHRFRNT
                     WNAVFLDGSWRFVQCNWGARHLVNAKDGSHEAKTDGNLRYEYDDHYFMTDPEEFIYEF
                     FPSDPAWQLLPRPLSLLQFERIPFVRSLFFKYNLSFIDKQLESTVYTDKTGAASVSIR
                     LPPKGDSLIFHYNLKFFDSEENLISGMSLKRFVMQSVTEDIVTFRVHAPSTRPLLLDI
                     FANSVSSGAYLTGQPIKFKSVCKFKVVCESLQVIMVPLPECASGEWGPAKATRLFGLL
                     PISHPDAIINTGRYVEIRFRMTRPLSEFVASLHRNRTDDRALQQCTRSMLKGDMVYIQ
                     IDFPGEGQYGLDIYTRQDDQLINGKQLLTHCCKYLIHSRNC"
     assembly_gap    569383..569392
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    578214..578704
                     /estimated_length=491
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             complement(join(<581262..581511,581780..581861,
                     581907..581970,583333..583520,583572..583714,
                     585454..585561,585733..585870,585916..586145,
                     587094..587519,587570..>587719))
                     /codon_start=1
                     /gene="Cbr-sfxn-5"
                     /locus_tag="CBG_00735"
                     /standard_name="CBG00735"
                     /product="Protein CBR-SFXN-5"
                     /note="C. briggsae CBR-SFXN-5 protein; contains similarity
                     to Pfam domains PF10292 (Serpentine type 7TM GPCR receptor
                     class ab chemoreceptor) , PF03820 (Tricarboxylate carrier)
                     , PF03125 (C. elegans Sre G protein-coupled chemoreceptor)
                     contains similarity to Interpro domains IPR019408 (7TM
                     GPCR, serpentine receptor class ab (Srab)), IPR004686
                     (Tricarboxylate/iron carrier), IPR004151 (7TM GPCR,
                     serpentine receptor class e (Sre))"
                     /note="Predicted"
                     /db_xref="GOA:A8WN68"
                     /db_xref="InterPro:IPR004151"
                     /db_xref="InterPro:IPR004686"
                     /db_xref="UniProtKB/TrEMBL:A8WN68"
                     /protein_id="CAP21923.1"
                     /translation="ITMSQPETLFGYPTYPKFKLGETRFPQDTFLGRYLHCLDVIDPR
                     TLFASNKKLEESLELLDAYKSGTALNVPDKALWEAQKLKSAVLHSDTGEKVFPPFRMS
                     GFVPFGWITVTGMLLPNPSWPTLLFWQWMNQSHNACVNYANRNATQPQPLSKYIGAYG
                     AAVTAACSISGGLTYFIKKASSLPPTTRLIIQRFVPLPATSLASSLNVICMRWNEMET
                     GIEVYEKGTGKVVGVSKAAAKQAVTDTTLVRAFLPVPLLLMPPCIMPFLERFKWVTKT
                     QVRHIFVNAIVCTLSFAVSLPVALALFPQESAVSFLKILYNVINKISIFQISRELLEP
                     EIQQKTSQSQLYYNKGLTLLLAVERYFATIWVASYESKKYKSVSFLLVGTNIVAGFIA
                     SMVFHYELLFNLISVVSLGLFLNIVSILLFWTLHSLNKTNMEVCQNRDIQQSYTLSLR
                     FQLNENLKIMKWLQNCILVVTVSNTLLAGFLVVSNHAHLKENYPVLVKYCHSFLNFGI
                     AVYAQVAFCVCALADRNFRQYFLRFEIIRIFLKPFFGRIFPEDFKIKETLSTSEETNV
                     YFSKLSLQWDDTMMKNVKGVVKKRKKF"
     CDS             592416..592550
                     /gene="CBG25493"
                     /locus_tag="CBG_25493"
                     /standard_name="CBG25493"
                     /product="Protein CBG25493"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:B6IEN3"
                     /protein_id="CAR98363.1"
                     /translation="MISSNRFPLLLPKKRMLLSSSKHFPLRQRENITNHYHSFTLLFH
                     "
     CDS             join(593054..593100,593731..593796,593840..594323,
                     595198..595516,595565..595663,595713..595819,
                     596293..596499)
                     /gene="CBG00736"
                     /locus_tag="CBG_00736"
                     /standard_name="CBG00736"
                     /product="Protein CBG00736"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WN67"
                     /protein_id="CAP21922.2"
                     /translation="MSTRYDYGLLEFTANLAEAEATYGQKLQSIIDTFSQSRLDLPIK
                     RLSEIAKVHTRTAANLKKYMDPKKNEHLNLWKFCNVYSCGAVDLDKAMRETRSSLRTK
                     MAVDGTVIEKPKRRNIFNSIQNHLNSSSSSYSTKSAENSEKVEKDRRWFPKLPDRKLE
                     FRTSRKTTSSSVEEEKVVVSGSMSTPQTPQIVRAHSQLTSSVSVAPDLQEKPPRPPIR
                     TTVPEPTPIAQPPVSVPVYTTQPYATPIYGDLQKASNPFGINNNINNNRMGIVEEHLL
                     RHQDDAQTREMAVVRIRTDVDVYKEMKKNEAIMNVYDSPLINKSHYVNIRPPIAQKPK
                     IMAPAVPSPPNEDVSPTFISVECYQAGAPTPSPRRAYYNTNDIPSSQRSSSSAYSSNY
                     SSASSSNVTSFAVDNPPSSTDSSNQNLTPGVVENARYVRIASPDGVHHRF"
     CDS             complement(join(597074..597265,597319..597750,
                     597794..598239,598291..598360))
                     /gene="CBG00737"
                     /locus_tag="CBG_00737"
                     /standard_name="CBG00737"
                     /product="Protein CBG00737"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WN66"
                     /protein_id="CAP21921.1"
                     /translation="MSFAQSFYADQKKVEQQPRQQENASPLTTAAIPAHTPIAEDPLT
                     PAQIREAIRIYRSVLSTNSAPASPVRAPAAPPIAERPEVHSNYYGGGPTDIPQSYLLN
                     YATSSPQQPASAPATQAPEPLFTEQQLIAQLQALQVQQQQVAEPVCEVPVVQQQQQPK
                     AAPNKAPVLQKMYDDEESGYCFNRKGRDEDGPEEIPEAHVATPTSAPAANYSIPAPQQ
                     QVNYSPAPVANNYSKVVCGPSEYIGMANDNKFIYDAQKALPVSYAQNNSYTLVNPTAQ
                     APIAQPRFEETDDQGVTTTEDVTQVPASPAVTSRFRGMIRNAQTPVQAPPAPIVVERV
                     AEPVNTTPSHNYNNYGAFMPVNQMSMESEYQLPVLNDLASCIEHY"
     CDS             complement(join(599837..599947,600923..601144,
                     601180..601930,601973..602100,602156..603411,
                     603462..604053,604101..604652,605137..605253))
                     /gene="CBG00738"
                     /locus_tag="CBG_00738"
                     /standard_name="CBG00738"
                     /product="Protein CBG00738"
                     /note="contains similarity to Pfam domain PF00443
                     Ubiquitin carboxyl-terminal hydrolase contains similarity
                     to Interpro domains IPR001394 (Peptidase C19, ubiquitin
                     carboxyl-terminal hydrolase 2), IPR018200 (Peptidase C19,
                     ubiquitin carboxyl-terminal hydrolase 2, conserved site)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN65"
                     /db_xref="InterPro:IPR001394"
                     /db_xref="InterPro:IPR018200"
                     /db_xref="InterPro:IPR028889"
                     /db_xref="InterPro:IPR038765"
                     /db_xref="UniProtKB/TrEMBL:A8WN65"
                     /protein_id="CAP21920.2"
                     /translation="MVQEGEKQMTEDEALAYALAQLREICPHCSDDRIIEVIRRNSQR
                     GPLSVTDSFLAKVFEDLSSPEQADSASNFIGPAMKPGTSSQTSEIMDIVPYYDPKMPS
                     ISEETVQTSISRSHVQPSTSQAAYNTERNEEEMIRDPNKTVGLFNQGNTCWFNSLTQM
                     LFSIPKFRSVLYNCTPLTWHEQPIKNVQVQFELHADLLIRFRRLFVELYFSEESHVVA
                     GEILTIVDRLYTAKGGPSTIGSQQDASEMLTLIMQWLGYSINAAIYAHLHSNFTRVID
                     EENNMVISHSSEQAPNSDVAGTLPPVYQENVQDLASSTSVKREAESRANSPVKNVPAR
                     DSFGGPAAKSPRTSPSDLPQIEEAMDTSEGPDTQARPKAESVENPRAPEAMEEKAVDA
                     RTIELVEKIKHDYAQIFQATSHMEKFSDSGELVGDVNTNMHCPVCFNLPVSYGNLHDA
                     LEASTFEVRADGDKTVNTRSMYEALPAVFFVSLNRFHFGKSGAKLHDKFTFPREIFMD
                     RYIRKNADLITPLRAKLADLRNKLSEARARLNGLHHYPHGTMNLNVINLIDAFQSVLN
                     ATTNSRTSEDPSPFRPPNNYGNSLNFIKDQGKIFPVFEESFPDLHAMNRGLKDALSEL
                     KSTEAALLEFMARLEQEIQGIYEVEELKKENYELKAMILHVGEINRGHYWMYKLKRSI
                     DGFEEWEKLNDQSATPVDYSQIEKEAFGTGISTDPSAYLLLYVKKDAHWLMEPDTETH
                     QESFERLPSDLQKYVTEKKEAFRKRLQEYRERQSALLENPQPTSEEARGTTQFSWYRS
                     EDHMQEDENANIDPNEILGRRLDSYAIPEASSEEMQEMRNVTQGLWTMIVNFDRDSFS
                     SPIDLLDSNLRMTMDKTGSEFIEKNLGYSVKELRGDAENDTERIYNHFIMTFIRHMEK
                     DIYSHFSVFVAAQLQRVYIPVIRYLLVRSMAISNLGVLKIRAQGELEGHCANSSDNGK
                     SMETIVLTLSHMYQLGRLIATHCRISMEKIVAFQNGDSIYATAAREKENLENVYCALV
                     AAKHARMCYKFLRIRADFLGKDTIYFVNQAQIDACTVFAVLGAIKIITNLFNSTNDKL
                     DSLATYMTSCEASLNPDIFVNEICCALSQLQLWRQNLDRDAWFSNFLQNEIDIVALNQ
                     ALISKIEVAGSGEKVDRSEQKRTCAHVFHSALTESTNQWVDSISRGPKVIVLDGAEEL
                     RLIQELSEKFCGTSATQGKVDGMLLAIDENIGKLFTNF"
     assembly_gap    605042..605051
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             join(605875..605978,606021..606129,606244..606384)
                     /gene="CBG00739"
                     /locus_tag="CBG_00739"
                     /standard_name="CBG00739"
                     /product="Protein CBG00739"
                     /note="Predicted"
                     /db_xref="UniProtKB/TrEMBL:A8WN64"
                     /protein_id="CAP21919.1"
                     /translation="MAPRKNKPIVQVQGYAMRFKKMNKNGTELFYCVERERRARCYAA
                     YHYDKMNNTFTVKNQHARHDEDFVRSEVNRNRKLTNALKDGGLIKTLINQPIPPIMPL
                     TGLNLLDTISDAHSV"
     CDS             complement(join(607073..607309,607359..607530,
                     607658..607779))
                     /gene="CBG00740"
                     /locus_tag="CBG_00740"
                     /standard_name="CBG00740"
                     /product="Protein CBG00740"
                     /note="contains similarity to Interpro domain IPR024133
                     (Transmembrane protein 138)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN63"
                     /db_xref="InterPro:IPR024133"
                     /db_xref="UniProtKB/TrEMBL:A8WN63"
                     /protein_id="CAP21918.1"
                     /translation="MTSKYPYVLTTQFLMLTIDIFFNALSILCYGDNMALLLIYILQD
                     TLLIMSSLVLFVSFTATFVFQLGLIHIVLVQFLPTIIMSIFYTFVSIGYHYTSLSSTW
                     EDQTVNIFLETHLLIFFIFHKVISCIFYSFYKRTALQISDPKYNSDSTWLRELFIKHM
                     NDKAAKLEARNAAAAT"
     CDS             join(610518..610660,612110..612268,612944..613141,
                     613305..613659,613705..613906,614174..614391)
                     /gene="Cbr-tub-1"
                     /locus_tag="CBG_00741"
                     /standard_name="CBG00741"
                     /product="Protein CBR-TUB-1"
                     /note="C. briggsae CBR-TUB-1 protein; contains similarity
                     to Pfam domain PF01167 Tub family contains similarity to
                     Interpro domains IPR018066 (Tubby, C-terminal, conserved
                     site), IPR000007 (Tubby, C-terminal)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN62"
                     /db_xref="InterPro:IPR000007"
                     /db_xref="InterPro:IPR018066"
                     /db_xref="InterPro:IPR025659"
                     /db_xref="UniProtKB/Swiss-Prot:A8WN62"
                     /protein_id="CAP21917.1"
                     /translation="MSDTNSAWIEQNLQRQRKMLEDKQKQKRHQSAGSVRTTTTTSSM
                     SMNNMKDYPAFETSLPFSMSDHTSNMNTPLIPTPQAPPRNHTLTTRQSSMPATDTLIQ
                     INDYPENDISAKLSKVNLTPCVVSDDEDSDRRSYRESPWHNDIVADKIKTDILPDYNY
                     IKNNLQKFVDEPAQEHCLYRCSITRHKSGVDKTMYPTYYLHLEEMDTDKKAKIFLLAA
                     RKRKKSTTANYLLSTDPTNLSREGDGYCAKVRSNALGTHFTIYDNGHNPKKTDNQFSI
                     RQELAAVIYETNVLGFKGPRKMTVIMPGIEPGNDSKPAVRCIHRPVLEKHTLLEKNRS
                     GDTNSLKVLTNKSPQWNDETQSYVLNFHGRVTQASVKNFQIIHPNSPEYIVMQFGRVS
                     EDEFTMDFRYPLSAVQAFGIAMTSFHGKLACE"
     assembly_gap    618648..619474
                     /estimated_length=827
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             join(623412..623538,624283..624539,625245..625483,
                     625536..625867,626115..626244,627414..627756)
                     /gene="CBG00742"
                     /locus_tag="CBG_00742"
                     /standard_name="CBG00742"
                     /product="Protein CBG00742"
                     /note="contains similarity to Interpro domain IPR007087
                     (Zinc finger, C2H2)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN61"
                     /db_xref="InterPro:IPR000210"
                     /db_xref="InterPro:IPR013087"
                     /db_xref="InterPro:IPR036236"
                     /db_xref="UniProtKB/TrEMBL:A8WN61"
                     /protein_id="CAP21916.2"
                     /translation="MEEENPSPPPTGSESSQPSSPLRADFDTKIHLTYSTDDDKIEEE
                     VLFGHRTVLSTFSPILRQLIDDATSSSSPTSSSSTSSESSSDECFTSIKLDLSIFPNA
                     LCAFKVILDAMYSGDIKMAGIVQPNEILAICQFCQISFLDQKIISLASATPPMTLASA
                     LQCSNPFLQYTSAPPNYLSTMLNLWTNPFFGALFGSQGLAFSPPSESRTQSEGSSPRA
                     NSSSTPPTTDLEKIVPNDDKEGWCRNKKYIEKVDGGFMCTVCRKIYGRYNSVSYHVTI
                     YHRNPPIKCEENGCNFSTREARYIHFHKYYRHHIPLPENIDLGSRKCPFCRHVSKSPA
                     MLEKHIARHETEGPAGSPVGALKRAQSKKKIIVPTMASDVIPAATTSSIFGPSAANSN
                     IPIQCSLCTFSTNSTDLLFIHLAMQHTQELAQCSGMLADNSSETSTSTSSSSDGEPMI
                     TDIDLDIKPLIDQSLMLHLNTPLSN"
     CDS             complement(join(627944..628165,628215..628445,
                     629443..630120))
                     /gene="CBG00743"
                     /locus_tag="CBG_00743"
                     /standard_name="CBG00743"
                     /product="Protein CBG00743"
                     /note="contains similarity to Pfam domain PF05282 AAR2
                     protein contains similarity to Interpro domain IPR007946
                     (A1 cistron-splicing factor, AAR2)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN60"
                     /db_xref="InterPro:IPR007946"
                     /db_xref="InterPro:IPR033647"
                     /db_xref="InterPro:IPR033648"
                     /db_xref="InterPro:IPR038514"
                     /db_xref="InterPro:IPR038516"
                     /db_xref="UniProtKB/TrEMBL:A8WN60"
                     /protein_id="CAP21915.2"
                     /translation="MSDNTAVLLQAMRMGGALPPEIVEYMYHNGAFLLFLGFPQASEF
                     GIDYKTWKTGERFMGLKMIPPGVHFVYCSIKSAPRIGFFHNFKAGEIVVKKWNKEAET
                     FEDGEVPAEQIPEKKRQLKSMDNSLAPYPYENYRSWYGLTDFITPETVERVHPVLGRI
                     TSQAELVSLETQFMEDAEREHKETHFKNRVDRQNPVRTRFVDQHGLPIMKIREGYEIR
                     FQEIPALTVTKHQVGIDYSDRLYVLLRGLGGDWKQLLAEMQIAFVCFLQGQVFEGFEQ
                     WKRIIHLMSCCSNALGSEKELFMAFIRVLFFQLKECPTDFFVDIVSRDNFLTTTLSML
                     FANVRDSAHGGAELKKKTAQFKQYLTNQFKWDFDCEDGGEKL"
     CDS             complement(join(630273..630488,630535..630717,
                     630764..631009))
                     /gene="Cbr-rpl-10"
                     /locus_tag="CBG_00744"
                     /standard_name="CBG00744"
                     /product="Protein CBR-RPL-10"
                     /note="C. briggsae CBR-RPL-10 protein; contains similarity
                     to Pfam domain PF00252 Ribosomal protein L16p/L10e
                     contains similarity to Interpro domains IPR001197
                     (Ribosomal protein L10e), IPR016180 (Ribosomal protein
                     L10e/L16), IPR018255 (Ribosomal protein L10e, conserved
                     site)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN59"
                     /db_xref="InterPro:IPR001197"
                     /db_xref="InterPro:IPR016180"
                     /db_xref="InterPro:IPR018255"
                     /db_xref="InterPro:IPR036920"
                     /db_xref="UniProtKB/TrEMBL:A8WN59"
                     /protein_id="CAP21914.1"
                     /translation="MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKKANVE
                     VFPYTVHMMSNEREHLSSEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKM
                     LSCAGADRLQTGMRGAYGKPQGLVARVDIGDILFSMRIKEANVKHAIEAFRRAKFKFP
                     GRQIIVTSRKWGFTKWDRDDYVRMKAEGRLVSDGVGVQLNREHGPLSKWIDNPI"
     CDS             join(631566..633077,633323..633406,633457..633819)
                     /gene="CBG00745"
                     /locus_tag="CBG_00745"
                     /standard_name="CBG00745"
                     /product="Protein CBG00745"
                     /note="contains similarity to Pfam domains PF12706
                     (Beta-lactamase superfamily domain) , PF00753
                     (Metallo-beta-lactamase superfamily) , PF07521
                     (RNA-metabolising metallo-beta-lactamase) , PF10996
                     (Beta-Casp domain) contains similarity to Interpro domains
                     IPR011108 (RNA-metabolising metallo-beta-lactamase),
                     IPR001279 (Beta-lactamase-like), IPR022712 (Beta-Casp
                     domain)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN58"
                     /db_xref="InterPro:IPR001279"
                     /db_xref="InterPro:IPR011108"
                     /db_xref="InterPro:IPR022712"
                     /db_xref="InterPro:IPR036866"
                     /db_xref="InterPro:IPR041897"
                     /db_xref="UniProtKB/TrEMBL:A8WN58"
                     /protein_id="CAP21913.2"
                     /translation="MEKLKKKFGKKAFSEPAEETPVVVPEKKEVLPNIKIVPLGAGQD
                     VGRSCILITIGTKNIMVDCGMHMGYQDDRRFPDFSYVFKKIFLEKTFFFSYIGGGGRL
                     TDYLDCVIISHFHLDHCGSLPHMSEIVGYDGPIYMTYPTKAICPVLLEDYRKVQCDIK
                     GETNFFTSDDIKNCMKKVIGCALHEIIQVDDQLSIRAFYAGHVLGAAMFEIRVGDHSV
                     LYTGDYNMTPDRHLGAARVLPGVRPTILISESTYATTIRDSKRARERDFLRKVHETVM
                     KGGKVIIPVFALGRAQELCILLESYWERMALNVPIYFSQGLAERANQYYRLFISWTNE
                     NIKKTFVERNMFEFKHIRPMEKGCEDQPGPQVLFSTPGMLHGGQSLKVFKKWCSDPLN
                     MIIMPGYCVAGTVGARVINGEKRIEIDGKVHEIKLGVEYMSFSAHADAKGIMQLIRQC
                     EPKHVMFVHGEAEKMEFLKGKVEKEYDIPVHMPANGETCVIEVEPKMDIRVPLEKINK
                     SIALDPNPSKLECPFVAEIVYDQEKETIDVMPSTRLVETEDFMPITLSLSEIIKVIKI
                     DWNQIAADLIIYDPNLQQKNDGIEMFHGEITLLANNEKDTELEVIWDESREGWARVVR
                     SSLLRYASPEQTPPPEPQEPSSPIPVNA"
     CDS             complement(join(634001..634343,634392..635110,
                     635166..636141,636191..636588))
                     /gene="CBG00746"
                     /locus_tag="CBG_00746"
                     /standard_name="CBG00746"
                     /product="Protein CBG00746"
                     /note="contains similarity to Pfam domains PF00004 (ATPase
                     family associated with various cellular activities (AAA))
                     (2), PF05496 (Holliday junction DNA helicase ruvB
                     N-terminus) (2), PF02359 (Cell division protein 48
                     (CDC48), N-terminal domain) , PF09336 (Vps4 C terminal
                     oligomerisation domain) , PF07724 (AAA domain (Cdc48
                     subfamily)) , PF02933 (Cell division protein 48 (CDC48),
                     domain 2) , PF07728 (AAA domain (dynein-related
                     subfamily)) contains similarity to Interpro domains
                     IPR003959 (ATPase, AAA-type, core), IPR015415 (Vps4
                     oligomerisation, C-terminal), IPR003338 (CDC48, N-terminal
                     subdomain), IPR013093 (ATPase, AAA-2), IPR011704 (ATPase,
                     dynein-related, AAA domain), IPR003960 (ATPase, AAA-type,
                     conserved site), IPR004201 (CDC48, domain 2), IPR003593
                     (ATPase, AAA+ type, core), IPR008824 (DNA helicase,
                     Holliday junction RuvB type, N-terminal), IPR005938
                     (ATPase, AAA-type, CDC48)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN57"
                     /db_xref="InterPro:IPR003338"
                     /db_xref="InterPro:IPR003593"
                     /db_xref="InterPro:IPR003959"
                     /db_xref="InterPro:IPR003960"
                     /db_xref="InterPro:IPR004201"
                     /db_xref="InterPro:IPR005938"
                     /db_xref="InterPro:IPR009010"
                     /db_xref="InterPro:IPR015415"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="InterPro:IPR029067"
                     /db_xref="InterPro:IPR041569"
                     /db_xref="UniProtKB/TrEMBL:A8WN57"
                     /protein_id="CAP21912.1"
                     /translation="MAQVPVQKDEKEKKNDELATAILKDKSRPNRLIIDQSENDDNSM
                     VSLSQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRL
                     GDVVSISSAQLEYGKRIHVLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQ
                     AAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQL
                     AQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLING
                     PEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVEKRIVSQLL
                     TLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKN
                     MKLGEDVDLEQVANECHGFVGADLASLCSEAALQQIREKMELIDLEDDTIDAEVLNSL
                     AVTMENFRFAMGKSSPSALREAVVETPNTTWNDIGGLQNVKRELQELVQYPVEHPEKY
                     LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRD
                     VFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFI
                     IGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLAADLDLNFLAK
                     NTVGFSGADLTEICQRACKLAIRESIEREIRQERERQDRRARGEELMEDETVDPVPEI
                     TRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFPGEAPSGGQPVGAGN
                     GGAGGNDDDDLYN"
     CDS             join(638034..638164,638213..638404,638456..638987,
                     639241..639471,639687..639812)
                     /gene="Cbr-ctns-1"
                     /locus_tag="CBG_00747"
                     /standard_name="CBG00747"
                     /product="Protein CBR-CTNS-1"
                     /note="C. briggsae CBR-CTNS-1 protein; contains similarity
                     to Pfam domain PF04193 PQ loop repeat contains similarity
                     to Interpro domains IPR005282 (Lysosomal cystine
                     transporter), IPR006603 (Cystinosin/ERS1p repeat)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN56"
                     /db_xref="InterPro:IPR005282"
                     /db_xref="InterPro:IPR006603"
                     /db_xref="UniProtKB/Swiss-Prot:A8WN56"
                     /protein_id="CAP21911.3"
                     /translation="MKLPVSILFFISVSQILAFNNVIVTQKEVEIGVGETASITFQIK
                     NHTSSTLNQTRIQLSQSPYITNPDVVLVDNWWANVTVSGERPVAGEILEALNCTTDGE
                     EVCSLDLLDAYSRITVIRSHWLAILIQIVGWTYFAAWSVSFYPQMYLNFKRKSVVGLN
                     FDFLSLNLVGFGAYAMFNLLMYYNSHVKNIYSMENPRSPPPVLLNDVVFAVHAFLACF
                     VTILQCIFYERDQQRISTKCIILIIGLVSFGFVSVVVTVLNKITILDFVVSLSYIKMA
                     VTCCKYFPQAYFNYQRKSTVGWSIGNILLDFTGGSLDILQMVLQAINVNDWSAFYANP
                     VKFGLGFVSIFFDIIFMIQHYALYPDAEVPHNEYHGVDNPDPDSIVRDAEHGAADNES
                     MESTDPIIVHD"
     CDS             complement(join(641423..641590,641640..642188,
                     643552..643653,643753..643943,643993..644140))
                     /gene="Cbr-ulp-4"
                     /locus_tag="CBG_00748"
                     /standard_name="CBG00748"
                     /product="Protein CBR-ULP-4"
                     /note="C. briggsae CBR-ULP-4 protein; contains similarity
                     to Pfam domain PF02902 Ulp1 protease family, C-terminal
                     catalytic domain contains similarity to Interpro domain
                     IPR003653 (Peptidase C48, SUMO/Sentrin/Ubl1)"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:A8WN55"
                     /db_xref="InterPro:IPR003653"
                     /db_xref="InterPro:IPR038765"
                     /db_xref="UniProtKB/TrEMBL:A8WN55"
                     /protein_id="CAP21910.2"
                     /translation="MEVSTSYCTPAVNFKYGSFPDSDVSMREDELFRMGSYNSQGYYV
                     DGTHIDSDGSIGEEDDTSSGSNDQDDDEDQMDFEEDDLEPESSISTEDEEEEDEEDND
                     EWTNQKRTDNQNSVAYYAAMEMLRIRFPFQSIAIRISDFCCLQEKDLLNDTMIDFYLN
                     HIVEHVLPDSSGSKVTVLPSLFWHNLSLRQHASDSEDEKLMSDEQKMDLKFGDLHDFV
                     ADFDLQDFDYIVVPVNEWEHWSLAVICHPYTSKARTVIFDSQLTADLNNLQNMATLIE
                     EFMKYSYEKRTRTVMPYPLPCVLPQRMPQQTNNYDCGIFIAEFARCFLLNPPKDLDNF
                     DFVNEYPEFNTTNKRAEMQRAVLSLSPNRARWRPLVELLNGYNTAAPHRAL"
     CDS             join(650862..650951,650997..651111,651221..651444,
                     652834..653074,654759..654883,654984..654992)
                     /gene="CBG00749"
                     /locus_tag="CBG_00749"
                     /standard_name="CBG00749"
                     /product="Protein CBG00749"
                     /note="contains similarity to Pfam domain PF01011 PQQ
                     enzyme repeat contains similarity to Interpro domains
                     IPR002372 (Pyrrolo-quinoline quinone repeat), IPR018391
                     (Pyrrolo-quinoline quinone beta-propeller repeat)"
                     /note="Predicted"
                     /db_xref="InterPro:IPR002372"
                     /db_xref="InterPro:IPR011047"
                     /db_xref="InterPro:IPR015943"
                     /db_xref="InterPro:IPR018391"
                     /db_xref="UniProtKB/TrEMBL:A8WN54"
                     /protein_id="CAP21909.2"
                     /translation="MRVLFHLCSIIFLLLFFASGTYSSTPGFPNEEEIFDEDIQDTVL
                     ASTIDGRLRALDAKTGKIKWTLEEEPVLRSPSAIKQGFTFLPNPLDGSLYVLKNSSLK
                     KLPFNIPQLVHASPCRGTDGIMYAGSKKDVWFGIDPTTGLKSETLSSASADRICPASQ
                     KQTIFLGRTEYRVSMFDEKNRGKTWNATFNDYSAHLLPEVNSWPFQHYTSSSHGQILT
                     FDKETGEIQWEADLKQPIVALYLLRNDGLHKLPFEVMGKETMENVQQKF"
     assembly_gap    651643..652133
                     /estimated_length=491
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             complement(join(655105..655228,655474..655563,
                     655662..655867,656237..656429,656612..656932,
                     656979..657301,657345..658078,658265..658513,
                     658778..658967,660676..660696))
                     /gene="Cbr-unc-105"
                     /locus_tag="CBG_00750"
                     /standard_name="CBG00750"
                     /product="Protein CBR-UNC-105"
                     /note="C. briggsae CBR-UNC-105 protein; contains
                     similarity to Pfam domain PF00858 Amiloride-sensitive
                     sodium channel contains similarity to Interpro domains
                     IPR020903 (Na+ channel, amiloride-sensitive, conserved
                     site), IPR001873 (Na+ channel, amiloride-sensitive),
                     IPR004726 (Degenerin)"
                     /note="Predicted"
                     /db_xref="GOA:A8WN53"
                     /db_xref="InterPro:IPR001873"
                     /db_xref="InterPro:IPR004726"
                     /db_xref="InterPro:IPR020903"
                     /db_xref="UniProtKB/TrEMBL:A8WN53"
                     /protein_id="CAP21908.2"
                     /translation="MPGAALLLKFENAPFPSITICNLNPYKKSAIQSNPNTKAMMEAY
                     SRRIGSGDKSEGIAAALSASGALHAKVRRAKRKAKGKPRLRDRRYHQAFAQCLCDIEP
                     LTGDRKGSCFAAFKGKIEIDTNSTAGFMNLHTSRCLCQLDTISKTLWPCFPYSSWKEK
                     LCSECVDNTGHCPMRFYKGNELYENIKEQVDLCLCHKEYNHCVSTRDDGVIIEIDPND
                     ELGNLDIGKKVASQLSLREEKLAETTTTEAPAVTQALGFEELTDDIAITSQAQENLMF
                     AVGEMPQSAKEGMSYELDELILKCSFNQKDCQMERDFILHYDNTFGNCYTFNHNRTAE
                     VASHRAGANYGLRVLLYANVSEYLPTTDAVGFRITVHDKHIVPFPDAFGYSAPTGFMS
                     SFGVRMKQFIRLEPPYGHCRHGGEDSPTYAYDGFHYSVEACHRSCAQKVIVDTCGCAD
                     PMYPIAEMFGNDTKPCQAVNMEQRECLRNTTLYLGELYSKGKESVIPDCYCHQPCQET
                     NYEVTYSSARWPSGSAKVMECLPGDFMCLEKYRKNAAMVQIFYEELNYETMKETPAYT
                     LTSVLADLGGLTGLWIGASVVSMLEIVSLICMAANGYYKDKTEERKSSLSAQSHHSIP
                     VQRASRGSLNTLHKSSTTQSVKLSVIDIRSLHSNHSSKSKQSIFIEDLPPAIQNLGTI
                     TSFQEQSDDEETSESSRTNGSCRYLAPGEDLPCLCKYHSDGTIKVMKALCPVHGYMVR
                     RNYDYSVSNSEEEDVEDEVHLEPEPFYTAPYEHRKKSTASKKPKKSTAGGPPPPPDED
                     LAMEAHNDPTDGQRTEEP"
     assembly_gap    659009..660008
                     /estimated_length=1000
                     /gap_type="between scaffolds"
     assembly_gap    660909..661029
                     /estimated_length=121
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    663007..663085
                     /estimated_length=79
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
CONTIG      join(complement(CAAC03002907.1:1..6584),gap(1898),complement
            (CAAC03002906.1:1..23178),gap(9683),complement
            (CAAC03002905.1:1..16554),gap(248),complement
            (CAAC03002904.1:1..24190),gap(10),complement(CAAC03002903.1:1..963)
            ,gap(14),complement(CAAC03002902.1:1..2708),gap(1783),complement
            (CAAC03002901.1:1..18091),gap(1188),complement
            (CAAC03002900.1:1..2444),gap(10),complement
            (CAAC03002899.1:1..15194),gap(63),complement
            (CAAC03002898.1:1..120568),gap(92),complement
            (CAAC03002897.1:1..28364),gap(432),complement
            (CAAC03002896.1:1..72379),gap(220),complement
            (CAAC03002895.1:1..24967),gap(1866),complement
            (CAAC03002894.1:1..6478),gap(493),complement
            (CAAC03002893.1:1..10929),gap(411),complement
            (CAAC03002892.1:1..9621),gap(349),complement
            (CAAC03002891.1:1..43713),gap(389),complement
            (CAAC03002890.1:1..78607),gap(281),complement
            (CAAC03002889.1:1..12181),gap(102),complement
            (CAAC03002888.1:1..1265),gap(1000),CAAC03004388.1:1..29872,gap(10),
            CAAC03004389.1:1..8821,gap(491),CAAC03004390.1:1..26337,gap(10),
            CAAC03004391.1:1..13596,gap(827),CAAC03004392.1:1..32168,gap(491),
            CAAC03004393.1:1..6875,gap(1000),CAAC03005337.1:1..900,gap(121),
            CAAC03005338.1:1..1977,gap(79),CAAC03005339.1:1..1138)
//