LOCUS HE600998 938652 bp DNA linear CON 17-SEP-2015 DEFINITION Caenorhabditis briggsae AF16 supercontig from assembly CB4, cb25.fpc2220c. ACCESSION HE600998 CAAC03000000 CAAC02000488 VERSION HE600998.1 DBLINK BioProject:PRJNA10731 BioSample:SAMEA3138181 KEYWORDS . SOURCE Caenorhabditis briggsae ORGANISM Caenorhabditis briggsae Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 938652) AUTHORS Howe K.L. CONSRTM WormBase Consortium JOURNAL Submitted (03-OCT-2011) to the INSDC. WormBase group, European Bioinformatics Institute, Cambridge, CB10 1SA, UNITED KINGDOM. REFERENCE 2 (bases 1 to 938652) AUTHORS Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R., Waterston R.H. TITLE The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics JOURNAL PLoS Biol. 1(2), E45-E45(2003). PUBMED 14624247 REFERENCE 3 (bases 1 to 938652) AUTHORS Ross J.A., Koboldt D.C., Staisch J.E., Chamberlin H.M., Gupta B.P., Miller R.D., Baird S.E., Haag E.S. TITLE Caenorhabditis briggsae recombinant inbred line genotypes reveal inter-strain incompatibility and the evolution of recombination JOURNAL PloS Genet. 7(7), E1002174-E1002174(2011). COMMENT Details of C.briggsae assembly version CB4: To improve upon the C. briggsae nuclear genome assembly CB3, 167 AF16/HK104 advanced-intercross recombinant inbred lines were successfully genotyped at 1,032 single nucleotide polymorphism (SNP) markers. The resulting data were used to estimate high-density genetic maps. Sequences were assembled by combining the physical and genetic positions of the SNPs to inform the process of ordering and orienting the cb25 supercontigs into chromosome assemblies. 37 of the cb25 fingerprint contigs were split into 100 supercontigs to resolve discrepancies between the physical and genetic orders of SNPs. 638 sequence supercontigs comprise the CB4 assembly. The total nuclear genome content decreased from cb25 to cb4 because of the removal of three supercontigs containing mitochondrial genome sequence (totaling 20.1 kbp). Assembly_name: CB4 Assembly_program: Phusion Seq_technoloy: capillary (whole-genome-shotgun) Seq_coverage: 10x Annotation details: Coding seqences below are the result of integration and manual review of the following data : computer analysis using the programs Genefinder (version 980506; P. Green, unpublished data), FGENESH (Salamov and Solovyev 2000), TWINSCAN (Korf et al. 2001), and the Ensembl annotation pipeline (Clamp et al. 2003); similarity to other proteins from BlastX analyses (http://blast.wustl.edu); sequence conservation with C. elegans using Jim Kent's WABA alignment program (Genome Research 10:1115-1125, 2000); individual C. briggsae GenBank submissions; and personal communications with C. briggsae researchers. tRNAs are predicted using the program tRNAscan-SE (Lowe, T.M. and Eddy, S.R., 1997, Nucl. Acids. Res., 25, 955-964). FEATURES Location/Qualifiers source 1..938652 /organism="Caenorhabditis briggsae" /strain="AF16" /mol_type="genomic DNA" /note="supercontig cb25.fpc2220c" /db_xref="taxon:6238" CDS complement(join(20..523,571..676,722..1413,3367..3537, 3579..3650,3875..4025,4094..4599)) /gene="CBG29115" /locus_tag="CBG_29115" /standard_name="CBG29115" /product="Protein CBG29115" /note="contains similarity to Pfam domain PF00028 Cadherin domain contains similarity to Interpro domains IPR020894 (Cadherin conserved site), IPR002126 (Cadherin)" /note="Predicted" /db_xref="GOA:H8WGX6" /db_xref="InterPro:IPR002126" /db_xref="InterPro:IPR015919" /db_xref="InterPro:IPR020894" /db_xref="UniProtKB/TrEMBL:H8WGX6" /protein_id="CCG58620.1" /translation="MMLNKIMFLPFFITSSLLLVSALTEDKYYSSEPISVVCKPCAVP SSSFVIWLPASRPPCLHPGQPIIHWPDSSSSDITSCPIPGFPDSIQSSQLSLLDDGLL LTKERVCFFDGPIDFHYNYVCDGQIYQSKMRIGHSVASMKKLEIRRTKRWARRRNPDA NAVHFQQEKYVKELPEDTPIETVIASVKASHASSQPLYYSMVAPQDSRSQNLFTLDTV SMSGEIRLAKSMDREVLDKHILKVSVTAYERVDPTISASTTVVVHVLDVQDNSPIFEK DSYFGEIREDAPVSLFNSSFTPISIGTTVLSVFARDLDSEENGEVEYSLGEGNGKNLL AINSKSGVIQTAAPLDRETLSLIRLDVIASDKGIPKKESKALVEITVLDVNDNAPVFA SDSYNITILENITLPTVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSSGEVTL RERIDAKNSPITAIIRAKDGAQPALSSTVSLTIHVVDINDHAPTLIAAQKMITLEENV AIGEEVGRVYAIDEDSGPNGIIRYSIEGSEDFIIDEDSGVIKTTKLLDRETTARYSLK VTARDMGTPPLNTSTTMTVVLKDINDNAPIFDKKEYNVTISEEMPRGSQIIKWKAVDN DEDQKITYRIEEADRDVFSILDIGDQGAILSVSGQLNKQDHKIRVEVSATDQGGLQGR CVVNVFIDDVNSAPYFNDHPFSVKIPEHSPIGYPVISMKVCILLMVFDFNF" CDS complement(join(7482..8173,8221..8478,8527..8959, 9006..9166,10428..10517,10568..10642,10693..10807, 10853..11167,11213..11307,11356..11521,11856..12038)) /gene="CBG09474" /locus_tag="CBG_09474" /standard_name="CBG09474" /product="Protein CBG09474" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X911" /protein_id="CAP29123.2" /translation="MQINLVWFLLSPLFIEVESPEYRGCAEFQNEFEYCEKKRDQCLS ETIETVDCDEKREKCFKENVGDSNCTIEYESNRRKRKQENMENTQIPPMKTLNLLLKN LRNPINDVVKNCSNEDDFENQKQLLQKEMDLVNSVDFSEFSRLKMPTAIIFNALIRNQ SISETCKQSLKEFEKKLAILDSAAFSIIPIPFAHWHCGWAYGDVGRVNLRLYASIATR NFAMNFNHVCAIQRDCYMNRKKRKTCDQMFKNSIHGIVNSLKRNKKGAEEFKEILMEL SDWKSEYAYSIANLTESSYSTYSENSEGAFTNFNYYYPMNKTAVVFLELKEQPKIKTN LDNLYPCCKFHRNALNPNEYEVPIPVLTDCPFASSMVDFCVSDLNFCINNKSGFPICS SQFCACIKKELPQNEQQCRANITDTCRLLKSRKSSHKEEYAPFKWPEEMEPVVTKIQG SCGSNELDSLKLVRAACDDISISELQSIQSLVQLIFDNQCVKNYKTMIDTSSMIVDKN TDIGVPFDRFRCGWQYGDIGKVLARYWIGNACGPYSVNFNHCCAKHLNCYINKVVKEL CDEEYYRCRTVCKCFQTKENEQYIFQSLVSRMVSHKESCRALNAVNNHELFNVKLSVY ESFGNTKIPTEITLFDGNLKKSFSGPSNLNFSLIKVFKLSSDERLDIEIGDSFYQEIY KNGWSNRGSTMFFLTPHQYDFAVIIDSSALIFEDCRKHNSILLCLKQLVFSISEIDGK TEEFDVAIRKFNETIASRCVAPLNKSEVVEMISKLENGRLPEYIVLFIVEIVIVLIFN QKCWETIKRIYYYFFSNKTPTQNVQDPAAIPLSQLGPVSELNGSTTFSEDSNTEIVNH PVHE" CDS join(12731..12818,12860..12986,13034..13145,13319..13435, 13484..13568,13613..13728,13777..13827,14263..14472) /gene="Cbr-try-10" /locus_tag="CBG_09476" /standard_name="CBG09476" /product="Protein CBR-TRY-10" /note="C. briggsae CBR-TRY-10 protein; contains similarity to Pfam domain PF00089 Trypsin contains similarity to Interpro domains IPR001314 (Peptidase S1A, chymotrypsin-type), IPR001254 (Peptidase S1/S6, chymotrypsin/Hap), IPR018114 (Peptidase S1/S6, chymotrypsin/Hap, active site)" /note="Predicted" /db_xref="GOA:A8X908" /db_xref="InterPro:IPR001254" /db_xref="InterPro:IPR001314" /db_xref="InterPro:IPR009003" /db_xref="InterPro:IPR018114" /db_xref="UniProtKB/TrEMBL:A8X908" /protein_id="CAP29120.2" /translation="MKVLFLFLFFSPFFQVVFAIIDGFRANSLDTLSLVSVITRFPDG YTNVCGGVLIAPSIAMTAAHCVFLNNEFAITAKVTLGDVSLSEEDDGEQEFRSHAMAI SKKFGSGIPEANDDVAIVFLPKRTNVCESPVSSQIARLPTTVSINFKETPKIPSNFQL ENSICWIAGWGKTENKTASHSDSVLQMMVKLVVRRIGNKKYLMAKGIVGSSRACMGDS GSPVYCFIDGRRTLIGTVAHIGSFVKMSQHDPSNHLQFCRDFEYAFISDWRESSARIV EILENYGELYQLEEGQTLCFGSGNF" CDS complement(join(14544..15038,15083..15320,15367..15629)) /gene="CBG09477" /locus_tag="CBG_09477" /standard_name="CBG09477" /product="Protein CBG09477" /note="contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domain IPR000535 (Major sperm protein)" /note="Predicted" /db_xref="GOA:A8X909" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR016763" /db_xref="UniProtKB/TrEMBL:A8X909" /protein_id="CAP29121.2" /translation="MSKAETDLTKVVFNPSKSFTFQPVARKQQATLEITNNSTSSVLV KFKNTNPDLLMTVPKTASIRIGEKKVFKCTFKGAPKEKCRPKERFTVVLVAASENADI AKVKGKAHKTACLKHLIQIIFVGVNDQKEKDTQQPTNVEDDEDKDRQGQMRAKSKVEP TPKVKKVANLIFLTRPEEESISDEDEENGGTVPAGPPPGDDMMTTRPAGTFTGQVAPN PNAAENPKSDLRTTRPAGAFTGQIASNPEAAGGAPVSKSEMKTTRPAGTFTGQTASNP TPGAPEDPKSTGMQTTRAAGAYNGQVTPNPTPGKNQDLKTTKNAGAYDNPQKSNK" assembly_gap 17343..17498 /estimated_length=156 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(17784..17887,18226..18917,18967..19137,19181..19350) /gene="CBG29112" /locus_tag="CBG_29112" /standard_name="CBG29112" /product="Protein CBG29112" /note="contains similarity to Pfam domain PF04536 Repair protein contains similarity to Interpro domain IPR007621 (Protein of unknown function DUF477)" /note="Predicted" /db_xref="GOA:E3CU09" /db_xref="InterPro:IPR033438" /db_xref="UniProtKB/TrEMBL:E3CU09" /protein_id="CBX32986.1" /translation="MSWLLFFLLVFPNFIFATEWDAYNFPNPTAGQFQECKMRTTANI CDPDGVLTEQSRYRLDHDLKQLESRTRQDNARTFCDKKGVTAAMAVAKHVKGGTTEAV ENMANDMLRKWTLDPQCKKAVVIVVSTDDMKFWVARDDKVPVYADEFTQIFMQQKSLF QQKNYQQALTNILQATWDKALSKQGSPRQPTNRGNQGPGNQGPGSGGKPSGGFKMPSI PGWFWLLLIGVIIPTLCCCCCIYCCCCRGRGGGGGGGNQSRQQVPTDPYGGGGGGYPQ PPPQPQGGGGGGGAGGMFRNILSSGGGAAAGSMLGRFLSNRGGGGGGGGMGSGNRGYG YQGSGGNQGNNQDQPVYDDNNGQGGGGLYPSQEVKDRGGGGSWA" CDS complement(join(19794..20003,20049..20273,20325..20900, 20949..21198,21243..21439,21481..22740,22778..23067, 23112..23212,23267..23570,23639..23705)) /gene="Cbr-inft-2" /locus_tag="CBG_09478" /standard_name="CBG09478" /product="Protein CBR-INFT-2" /note="C. briggsae CBR-INFT-2 protein; contains similarity to Pfam domain PF02181 Formin Homology 2 Domain contains similarity to Interpro domains IPR015425 (Actin-binding FH2), IPR003104 (Actin-binding FH2/DRF autoregulatory)" /note="Predicted" /db_xref="InterPro:IPR015425" /db_xref="InterPro:IPR042201" /db_xref="UniProtKB/TrEMBL:B0K075" /protein_id="CAP29119.4" /translation="MAKKRTNSKKNQKRNDQTAGSQNTKSPPHSDASRPASRVSNPSD VENSGQKNIPMRKKPISQKSTQIFGNKASQMNIPAKIVANKPVESTVNERCVDLGPMS STSSSRLDDTDVHIRHIVANFRGNTKKLEAIADINFMIDSTSSYLQRFTIRNKLRSNG LLSALAAHVDCAHVDEEVDAQVRTYLESEKRDARLLGLPDDSRSPIEALAKVMLRTTD LQWKKMVSLQNFIPKVAKRCGKNTKHTERLILASCDVNVLDFIGCSEKLEECIATLSN VQNDRKDRKDSEVQTDKMKGYAGLPREPSLALSTTIPEESAVFCDYSTSDDESKLSHS DPTTPDALMNRNLKKWATATDLPSQAKTGVDNSFFRSSCSASTFSSDDDGPLSPAHDS ALPAINEVLDSSEETESNEMHTGLDTTLPVKFADSANIAFIDEASSTSSLSDNMGFSE IMTMSFEMVDSEEKSWDNIPPISTNAPPPPPPPVSTTSMLPPISSTAPPPPPLSNVIA PVSSNAPPPPPPPRIPGMAPLATNAPPPPTLPPMPAGMAPLSRNAPPPPPPPTGSTGG PPPAPPLPLDMLKGAAAGLRTVPGGPPPPPPPPPPSFMFNGNASNAFSPGSATSPVLS PGIVKSAVVYRKQKKTAFVRWPKLTNQMQDAGTVFNDSLCVDFNEEERSKMEEVFEEA PIKQLNRKIGGSVGRVFGKSLRATTSSSDVNTISARSPTTQQVLVSPKALTIEILIKK LKPLDFTELIDKLERNETDGIKVDLMTTLNKNFPDKDELDPFLKVEYRTLTHASDQFC WHIARNKHLRLRIELFITKENLTAEIGKFQTQIELLQSGCTLARGEVIQVLLRKCLQY GNYLNQGSMFAEAAGFQFSYLLQLLQMKGKGQHVSVKLVDLIVAFCDLQTNQLEEIQA KMVSVRPLNLKDLEDAVGQVQRTIRKLDGQMRASNVEPLIAAYQPFMEQTSEKLQNVQ NGLSDVKTREMELQVYLCAGNMTLQAIFETLEQSMKIVMDAVKQAASKARVTRASSMV SLSTTSVSQRSLREGEILARKSMALKSRDLPVEELKKFFSHSSFGPQRTKKIPASPLT TSNISPTRTIRRRSGESFKEQQDEAKCQENNEDKDSDRQLPTAPLTPVEPPSVSSLRR DIRDLSSLVGSPV" CDS join(26673..26878,26925..27102) /gene="Cbr-far-4" /locus_tag="CBG_09480" /standard_name="CBG09480" /product="Protein CBR-FAR-4" /note="C. briggsae CBR-FAR-4 protein ;" /note="Predicted" /db_xref="GOA:A8X907" /db_xref="InterPro:IPR008632" /db_xref="UniProtKB/TrEMBL:A8X907" /protein_id="CAP29118.2" /translation="MINDLKQINPVLGSRVERKMIELKKKVAGLSDESKRFVDSLKAA GREVYAQRLKGQQMDRFQLRQIGMGVAQHYRFLSPYAQQELQSTFPQIFEFMQQARAQ MLQRFLGGGGMAGMAGMGGMDEMGK" CDS join(29121..29548,29598..29742) /gene="Cbr-far-3" /locus_tag="CBG_09481" /standard_name="CBG09481" /product="Protein CBR-FAR-3" /note="C. briggsae CBR-FAR-3 protein; contains similarity to Pfam domain PF05823 Nematode fatty acid retinoid binding protein (Gp-FAR-1) contains similarity to Interpro domain IPR008632 (Nematode fatty acid retinoid binding)" /note="Predicted" /db_xref="GOA:A8X906" /db_xref="InterPro:IPR008632" /db_xref="UniProtKB/TrEMBL:A8X906" /protein_id="CAP29117.1" /translation="MSRLLAFNLFFVAFVGFSLAAPTGEPSLFTQLLKEHKDILPSEV VEAYKDLSGDEKEKVKDVFKNYKDFKNEDQLIAALKEKSPELGEKAEKLQAKLQKKIN GMSEEPKAFIQELIAGGRGLYARSVNGEKISSSEIKLLIETQAASYKALKPEDKEELK KNFSGVVKFMEDDKVQTLISKLLEKTNDEH" CDS complement(join(29859..29982,30030..30436)) /gene="Cbr-far-5" /locus_tag="CBG_09482" /standard_name="CBG09482" /product="Protein CBR-FAR-5" /note="C. briggsae CBR-FAR-5 protein ;" /note="Predicted" /db_xref="GOA:A8X905" /db_xref="InterPro:IPR008632" /db_xref="UniProtKB/TrEMBL:A8X905" /protein_id="CAP29116.1" /translation="MLSRLFIFSLLFCFSFAADGIFEAVIESYKDALPPKVVEAFDNL SPEESAIMKEVFMNYDKFTSIADLIVAIKKKSESLGSLFEKLYIEVDAEIQTLTPETK KFVTELLGIGRAIYTAQIVGVPLDPKEVLPVFAKQFPSFKSLPDTNKEELKNAFLGLY KFASNDKIKVEIDKLL" CDS complement(join(32289..32886,32931..33310)) /gene="Cbr-dsl-7" /locus_tag="CBG_09483" /standard_name="CBG09483" /product="Protein CBR-DSL-7" /note="C. briggsae CBR-DSL-7 protein; contains similarity to Pfam domain PF01414 Delta serrate ligand contains similarity to Interpro domains IPR001774 (Delta/Serrate/lag-2 (DSL) protein), IPR013032 (EGF-like region, conserved site)" /note="Predicted" /db_xref="GOA:A8X904" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001774" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR039178" /db_xref="UniProtKB/TrEMBL:A8X904" /protein_id="CAP29115.1" /translation="MRARQSMLTLLTFSILFPLLKCTGYLELRLTSPYVRVLNTTVEL TVGGRKSFYKVPLSPYYELALTNVPMEFDEPASIIIRSGPVKEIGLTDSVINPKIFST QKMSIVTPKAGLPFSGFRIDIKCDTNYFGAHCDKFCDEEQARSMGRRCNILGNIGCPI GFRGSKCDIELPIDSGICKCKNGGKCVNSFDSKMTADFPICECLHGFEGAACEKTMKL FEPKISTRLFESTSRFHDLSNISVDNQLYDVNIDRSATLISPTFYISQQGASSGKAHR APRKQTTTVIFDPVTLSFHSAQPRVDSSRNYPKFNRPVRKNYLPTKNTV" CDS complement(join(35433..35528,35576..35706,36781..36897, 37399..37483,37534..37611)) /gene="CBG09484" /locus_tag="CBG_09484" /standard_name="CBG09484" /product="Protein CBG09484" /note="contains similarity to Pfam domain PF00090 Thrombospondin type 1 domain contains similarity to Interpro domain IPR000884 (Thrombospondin, type 1 repeat)" /note="Predicted" /db_xref="InterPro:IPR000884" /db_xref="InterPro:IPR036383" /db_xref="UniProtKB/TrEMBL:A8X903" /protein_id="CAP29114.2" /translation="MNRCVFLALLPLITALPVSVNIDDQAAVNLGAYDRARFDLVETF HPLQPASAVSNDQIAEVRAKAAGVKQNEASISIDLPTQILSGNLARTPERLAFGEWTE WTAWSVCQNGERSRVRTCVSRRPALRVVCHGDAIEIEKCYVDAGEGHIPVAADPWSIE REISGDFA" assembly_gap 43141..43910 /estimated_length=770 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 49731..49772 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(50364..50452,50502..50606,50654..50714,50763..50891, 51193..51513,51557..51961,52234..52350,52444..52548, 52593..52700) /gene="Cbr-shw-3" /locus_tag="CBG_09488" /standard_name="CBG09488" /product="Protein CBR-SHW-3" /note="C. briggsae CBR-SHW-3 protein; contains similarity to Pfam domains PF02214 (K+ channel tetramerisation domain) , PF07885 (Ion channel) , PF00520 (Ion transport protein) contains similarity to Interpro domains IPR005821 (Ion transport), IPR000210 (BTB/POZ-like), IPR003971 (Potassium channel, voltage dependent, Kv9), IPR003968 (Potassium channel, voltage dependent, Kv), IPR003131 (Potassium channel, voltage dependent, Kv, tetramerisation), IPR003091 (Voltage-dependent potassium channel), IPR013099 (Ion transport 2), IPR003974 (Potassium channel, voltage dependent, Kv3)" /note="Predicted" /db_xref="GOA:A8X902" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR003131" /db_xref="InterPro:IPR003968" /db_xref="InterPro:IPR003974" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR027359" /db_xref="InterPro:IPR028325" /db_xref="UniProtKB/TrEMBL:A8X902" /protein_id="CAP29113.1" /translation="MDSEYRIILNVGGVRHETYKHTLKKIPATRLSRLTTSLANYDPV LNEYFFDRHPGVFAQILNYYRTGKLHYPLDVCGPLFEEELKYWGLDSNECEPCCWMTL SGTRDTQDVLKTLDELDIEVDQTEGPELYKRFGWEDDYHNDSLSAWQRLKPRIWRLFD EPNSSRYAQFIAAISVFFLITAIIVFCLKTHPGLRIPELQLFGNFSRNHRSISSRIQP AQINIDKQNSRPHPTFMYIETICNIWFTIEILARFASCPCRIEYLRAPVNIIDIVATL TFYIDLLSSMFGATADLEFFSIIRIMRLFKLTHHNSGLKILMHTFRASAKELMLLVFF LVLGVVVFASLVYYAERVESNVDNQFVSIPVGLWWAIVTMTTIGYGDITPHTYLGRLI GSVCALAGVLTIALPVPVIVSNFAMFYSHTQARSKMPKKRRGVLSIDQVAPHVKNAPF RNSNGPTLRKNMEHTPLVSNNHTPPHTLI" CDS complement(join(53104..53339,53394..53643,53691..54057, 54104..54354)) /gene="CBG09489" /locus_tag="CBG_09489" /standard_name="CBG09489" /product="Protein CBG09489" /note="contains similarity to Pfam domain PF04696 pinin/SDK/memA/ protein conserved region contains similarity to Interpro domain IPR006786 (Pinin/SDK/MemA protein)" /note="Predicted" /db_xref="GOA:A8X901" /db_xref="InterPro:IPR006786" /db_xref="InterPro:IPR006787" /db_xref="InterPro:IPR039853" /db_xref="UniProtKB/TrEMBL:A8X901" /protein_id="CAP29112.2" /translation="MEPMLVEDLESDINAARDKLRTIDDKVTTLNGRPPRQRISYNDE PEDGPLRNVGRDAFGLKEEAPTWGTRKTIEAPAGVRSRISMEGRVDRRSGGGRQSFDG HKRQRPDHLENDEEEDDFGKRQKRSVQSTVVMPALDSKGREEKIEKLKETENKDSKQR TKRLFSNLIMGTLSSFKKTEKKTTQQEKQEAVEKRLEETKKKDLESRREEKHDLLNQR REHEKELLGLQRKKALIQYADHSVKQLSLMKGWIKTKTNPPIYWQPVKHTVRSMELQQ ATERQIESESLNACQINERKEQLKKELDGGNAAEIRAAAKTEDDEEDEYEDDEEKNEN EDIEVVLKTEDDLKREEEEDEKEEEIDVHVELD" CDS complement(join(55453..55833,55886..56258,56361..56577, 56634..56814,56870..56929,57652..57681)) /gene="Cbr-lin-46" /locus_tag="CBG_09490" /standard_name="CBG09490" /product="Protein CBR-LIN-46" /note="C. briggsae CBR-LIN-46 protein; contains similarity to Pfam domain PF03453 MoeA N-terminal region (domain I and II) contains similarity to Interpro domain IPR005110 (MoeA, N-terminal and linker domain)" /note="Predicted" /db_xref="GOA:A8X900" /db_xref="InterPro:IPR005110" /db_xref="InterPro:IPR036135" /db_xref="InterPro:IPR036425" /db_xref="InterPro:IPR036688" /db_xref="InterPro:IPR038987" /db_xref="UniProtKB/TrEMBL:A8X900" /protein_id="CAP29111.2" /translation="MKSKSKLKVYVKPRIVSVGVNPMSSVGFPKSYSTEDALEKLKIL AKRYPPQSKVVEVSFSIIGRVLADDVEAIEDIPAFRKSLVDGFAIIYNQSGTKRKIVG ESTAEKPYDAMIQLGECVRITNGGVVPDGADTVVPFENVTLNDEEKCIQINVKHSRGE YIRERGSEAKEGQVLIKNGSKLGSLEVNLLCALGISQVEVYKNPRVCIMSALNAATNQ KQTHEHSNRSRLLRIFQIQGFKPIDAGESSMKPKKMEKNLQIAADFACVIVIIGDINK IQKVIQKMNLKIYIDGIVPDNFVFGHGSIDRKPVFLCVLPQHLTPAWVGANVFIFPLM RTLGGQGFDSNYRLEGNLTTTVEESPRKLEFYSIRTELSNGVSKQESEANQRANSLLK TSENATYSSGDTVAIVLTDFT" CDS join(57240..57367,57824..57927,57979..58073) /gene="CBG09491" /locus_tag="CBG_09491" /standard_name="CBG09491" /product="Protein CBG09491" /note="Predicted" /db_xref="InterPro:IPR038584" /db_xref="UniProtKB/TrEMBL:A8X8Z9" /protein_id="CAP29110.1" /translation="MKRDTEWLFTICECEKGQMYVPSASEGATMKQFRNIESREQRKY VIVQLASVITGSTRVWVRERAADKFAGIFYDPAYGKSCLFEEVKRIKGKTELPKRIRG IYNIEN" CDS join(58253..58336,58383..58485,58537..58610,58656..58712, 58760..58870,58919..59118,59166..59247) /gene="CBG09492" /locus_tag="CBG_09492" /standard_name="CBG09492" /product="Protein CBG09492" /note="contains similarity to Pfam domains PF09439 (Signal recognition particle receptor beta subunit) , PF04670 (Gtr1/RagA G protein conserved region) , PF00025 (ADP-ribosylation factor family) contains similarity to Interpro domains IPR005225 (Small GTP-binding protein domain), IPR019009 (Signal recognition particle receptor, beta subunit), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR006762 (Gtr1/RagA G protein), IPR024156 (Small GTPase superfamily, ARF type)" /note="Predicted" /db_xref="GOA:A8X8Z8" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR006689" /db_xref="InterPro:IPR019009" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8X8Z8" /protein_id="CAP29109.2" /translation="MDFTDPTTLGVLVAAVVGLITILLIVLKSLRSSNKNRVLFVGLM DSGKTTIFTQLSQKEAEYPTTTRTFTSMVENKITLRIKDKEREIIDYPGNDRLRQKLI DLIHSRSLLRIVFVVDSAAFSKNARDVAELFYLVALENTDKVPILIACHKQDLSLAKT EKVIRNSLEKEIGFINKSRAAALIGTDGSDEKRATLTDTGVDFSWEDLKKQEVSFVTT SSYSADFGVHEIASFVRA" CDS complement(join(59456..59643,59687..59844,60155..60351, 60398..60538,60583..60888)) /gene="Cbr-srd-35" /locus_tag="CBG_09493" /standard_name="CBG09493" /product="Protein CBR-SRD-35" /note="C. briggsae CBR-SRD-35 protein; contains similarity to Pfam domains PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) , PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd) , PF10326 (Serpentine type 7TM GPCR chemoreceptor Str) contains similarity to Interpro domains IPR019422 (7TM GPCR, serpentine receptor class h (Srh)), IPR019421 (7TM GPCR, serpentine receptor class d (Srd)), IPR019428 (7TM GPCR, serpentine receptor class r (Str))" /note="Predicted" /db_xref="GOA:A8X8Z7" /db_xref="InterPro:IPR019421" /db_xref="UniProtKB/TrEMBL:A8X8Z7" /protein_id="CAP29108.2" /translation="MDGPTEIYIEILSFVYPTFLFTTLISHLFLLIFIIFFSPPHLKF LRILLLTTSIFDVLATVINFYVQPRIVSGEQENVPVQCYGLCRYMYPEFCFAFYMGWQ TISLAVGASMTYTLFFKYYKITRTKSLSGWRLFLSLVLFYTPCLISMICSAIIVMRNT TPANLRKNSEEKMGFNPRYLEMGRMTLGALPNRINFLMMAQGIYVSPFLSFWFRWKAN KNLKDTVSGGSLLLQKHTKSVMKGISLQVFIHFVCYIPLFSLYTYSILSETEILAQQF FLAMSPNLAATFDPLINLYFVLPYRKQIKSWFCKEHTPVAPSGIISRHLSTVE" CDS join(62107..62236,62279..62510,62554..62633,62681..62936, 62983..63115) /gene="CBG09494" /locus_tag="CBG_09494" /standard_name="CBG09494" /product="Protein CBG09494" /note="contains similarity to Interpro domain IPR008551 (Protein of unknown function DUF833)" /note="Predicted" /db_xref="GOA:A8X8Z6" /db_xref="InterPro:IPR008551" /db_xref="UniProtKB/TrEMBL:A8X8Z6" /protein_id="CAP29107.1" /translation="MCITFFKTARSSLDKYKLILLNNRDEHLLRPTREMHWHDGILSG VDEQDHARGTWTGINRNGRIGMMLSITQTQESKIPNAPSRGGIVNSFLNAHNTSDMVE SLLIMAGIYNGFQLVCLEQNQFGLYEVRTLTNQQVENIEVCQWNDEYHVISNSPPSKP YQKAVYGKQLFSERLQYSDEMTVDEVFETLLEIAVNRKQCYPDAQLQFQTRNTHEYNR PLSAIFIKYPEGTREYGTRCHTLITIDQNNKVSVLERRYLPLESTWKDARFEFSINGN " CDS join(63704..63862,64904..64990,65712..65849,65895..66620, 66664..66819) /gene="CBG27085" /locus_tag="CBG_27085" /standard_name="CBG27085" /product="Protein CBG27085" /note="contains similarity to Pfam domain PF00581 Rhodanese-like domain contains similarity to Interpro domain IPR001763 (Rhodanese-like)" /note="Predicted" /db_xref="GOA:B6IHG1" /db_xref="InterPro:IPR001763" /db_xref="InterPro:IPR036873" /db_xref="UniProtKB/TrEMBL:B6IHG1" /protein_id="CAR99341.1" /translation="MQKWSVGVRPKEYETKTVEDVYNTVEEVDTKEYEDPDYFYDELG RVRRTEKRMAKKVPMIATPPPIPPPMTPTHIAIHNPKNSTSKRWKIACVSATVTLLAV FILATILSFFFFVSSASSFQKESYGLPRPSMESSLLSKRSDMEITPNHLLTLLITKRK ICILEAASGDEMKSRDAFSLDHIESARLIFHSNMSHAGVPVHPLQFQRFARSQGIDND CHIIVYDRGQMIWSAYTVWIFKLFGHQKVSLLSGGYLGWKTHQARSGQYKTEQGDAPG KPRQGDFLASWNDSVIITYDDVLLNTEIDNFDVVDAQTKEEFLGTAQGALYGHIKGAR NIPVDAVYDWAVGQWKAADHLKGLFNNNALSLRKPVIVYCSTSLRSAMVWWALTRSGY NGKIYFGGWPEWVVRAPDGLKVIGTTSES" CDS complement(join(66979..67025,67078..67284,67424..67517, 67563..67761,67814..67989)) /gene="Cbr-eif-3.K" /locus_tag="CBG_09495" /standard_name="CBG09495" /product="Protein CBR-EIF-3.K" /note="C. briggsae CBR-EIF-3.K protein; contains similarity to Pfam domains PF10075 (COP9 signalosome, subunit CSN8) , PF03399 (SAC3/GANP/Nin1/mts3/eIF-3 p25 family) contains similarity to Interpro domains IPR019280 (COP9 signalosome, subunit CSN8), IPR009374 (Translation initiation factor 3, subunit 12, eukaryotic), IPR005062 (SAC3/GANP/Nin1/mts3/eIF-3 p25)" /note="Predicted" /db_xref="GOA:Q61K76" /db_xref="InterPro:IPR000717" /db_xref="InterPro:IPR009374" /db_xref="InterPro:IPR016020" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR033464" /db_xref="InterPro:IPR036388" /db_xref="InterPro:IPR036390" /db_xref="UniProtKB/Swiss-Prot:Q61K76" /protein_id="CAP29106.1" /translation="MSFERLQRDLHEAIEGVNRYNPENVAELAACVQAMVAENKYDKD IVLTILKLYQLNPERYDENVVRQVLLKTLMVLPSSDFALAKCLIDTNRIGSQELRRIF DLGAVLESCNFAVFWKLMKGTYKPTTNPNEPFKVPAEISKMIKPMAGFEDAIKHYACR VISVTFQNIEKKLLSSLLGGASDKEVTALAKKFGWETKENGEVFFVANHEGTIKTRNI DEKIQFSHVADLLTSNVPPLAF" CDS complement(join(68108..68299,68356..68559,68603..68659)) /gene="Cbr-pqn-68" /locus_tag="CBG_09496" /standard_name="CBG09496" /product="Protein CBR-PQN-68" /note="C. briggsae CBR-PQN-68 protein; contains similarity to Pfam domain PF02580 D-Tyr-tRNA(Tyr) deacylase contains similarity to Interpro domain IPR003732 (D-tyrosyl-tRNA(Tyr) deacylase)" /note="Predicted" /db_xref="GOA:A8X8Z4" /db_xref="InterPro:IPR003732" /db_xref="InterPro:IPR023509" /db_xref="UniProtKB/TrEMBL:A8X8Z4" /protein_id="CAP29105.1" /translation="MRVVLQRVTRAAVTVSDEVVGSIGRGLCVLVGIHRDDTEEDMKY IIRKILNLRIFPASEEKPWDKSVMDLDLEVLSVSQFTLYGQFKGNKLDFHTAMAPTEA SKFYATFLESLKKAYKPEKIQDGKFAAMMSVDIVNDGPVTISFDSKEK" CDS join(69103..69193,69240..69320,69367..69517,69860..70536, 70590..71212,71259..71406,71452..71890,71940..72458, 72509..72656) /gene="CBG09497" /locus_tag="CBG_09497" /standard_name="CBG09497" /product="Protein CBG09497" /note="contains similarity to Pfam domains PF12796 (Ankyrin repeats (3 copies)) , PF00023 (Ankyrin repeat) contains similarity to Interpro domains IPR002110 (Ankyrin repeat), IPR020683 (Ankyrin repeat-containing domain)" /note="Predicted" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR020683" /db_xref="InterPro:IPR029018" /db_xref="InterPro:IPR036770" /db_xref="UniProtKB/TrEMBL:A8X8Z3" /protein_id="CAP29104.2" /translation="MGEKEEAAPVLLQCLESGRVDVICSILSQMKNQADFHAQVDKVC CNEGTLLHKAVGLDAPDSVAALLSGGVNPCVQNSDGKTAYQCCKSENVRLSFVREALQ SITMNKTERLCQLIRAGVSVDSVDTQQTKNTLLNWAAEFATADVIKALLTNGATVDMA NAKDETPLHTAVLKAEPEVVKLLLSSGANPSLKTKKGQDAFALAETHNPALLSLLSMD QIARDIRHHKSVDDMDDRMSLISCTETLNTQIFNDSIKYEKYIEGEIDSWTDLLWPQP KLISIKHQSVRNFEFPKDGKLKVYFDDCSSANPRQVMQIIELSKPLLVSVGVDIEYRG HRLADHETSALEGKVTCGVFEDGRPSGSYTLTIDAVRGVEVIGSDYAGIRHAFATFVQ IVRLHKYALHKSVYYNGGSSAPSSPNGNASGDHSILNGSNTTKHLPDISADGTIKELT IRDQPDRAFRAVYQDFSGCRILNPDTVSEDLGKSNYNLCLQILKLATRLSSCKANYLF VNFEVRTTDRYQLPYTNRELFHMMQVCQELFITFVPSIDTQSNYLEGDQAKSIIDQFL DDFPLCKVVHFGPNLTSLLIADRKLLTSIQRRVPRIYLSTHVDEKNGPLLSTLPPFVT LCVEGTWPFEVEKYVFPRVSVVIKFSTGDDGYLCAAPESVAKKALLAAKLSDRQTVLG SMVCDLSTGCEAMPPSLSYMSLLASVGVAYNSSTDMKKYAFLLPVIAAHHMLLDGDMV TLFEQVQTLGKVEHQLTKYAYGYWKPNSSSSPNVDISATSETTLFGMSANKKMPISVF VEMILNPENMNMERLTPVVFKKARIELKRTSSALDAISKLLPYSYDLALVLEEIRLVT ELMVLVSKLGQYMCVYGGQPIDRKKSFEEGLPYSPGRVGVINLPPAIRTDLANTMLRV RGQFQHVWLSRSIPSTLQNALKMFDNLFRALLPHDLQEMGKQLL" CDS complement(join(72955..73340,73390..73466,74070..74155, 74200..74269,74311..74549,74623..74865)) /gene="Cbr-grl-2" /locus_tag="CBG_09498" /standard_name="CBG09498" /product="Protein CBR-GRL-2" /note="C. briggsae CBR-GRL-2 protein ;" /note="Predicted" /db_xref="InterPro:IPR007284" /db_xref="UniProtKB/TrEMBL:A8X8Z2" /protein_id="CAP29103.1" /translation="MLTALILLQLLIPPSLQFFFGSSGGGCGCPCPVPPPIPICAPQP ICAQPAPCSSSPSYPSYSPSYSSYASAPAPVPSPFYQTGWSPAIQPYASAPTIPSYST SYSAAPPPLVIPSGPSYVAPVSAPSYSLTPSISIPGPLPPSPIYMPALAMPIVTNGYD QISIVTSIATTPSYLQSGYVPAASKGYETKYDEENSVEGMAPPPPPPPIGIPKEPSTY DYRTSEVVTPSDYYKPAIVPSMSYMEDSSEEGQLVEKQGYWMKGHPVSQTSSKYGQFE ARHNILKRMKTEAIPRTNNTCNSIKLANVMMRAIVDDVSVSKRMIQHATKLAFDGAKF DVFCAIGEFSYSVHSRKYCEVTKQDVTCFAFR" CDS join(75846..76007,76295..76675,76723..77124,77261..77425, 77484..77558,77604..77744) /gene="CBG09499" /locus_tag="CBG_09499" /standard_name="CBG09499" /product="Protein CBG09499" /note="contains similarity to Pfam domains PF02958 (Ecdysteroid kinase) , PF07914 (Protein of unknown function (DUF1679)) , PF01636 (Phosphotransferase enzyme family) contains similarity to Interpro domains IPR012877 (Uncharacterised kinase D1044.1), IPR004119 (Protein of unknown function DUF227), IPR015897 (CHK kinase-like), IPR002575 (Aminoglycoside phosphotransferase)" /note="Predicted" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR012877" /db_xref="InterPro:IPR015897" /db_xref="UniProtKB/TrEMBL:A8X8Z1" /protein_id="CAP29102.2" /translation="MSVGEEGSPLFKNGDGLFSTHVHLEDLQKVIGEQMNTKAELGPN TKYTIVGDGNGFMSRVVLVDPDWTVPDEHLPIRFVLKITSCMHVLNVLEQMNLKDKRE SALWSIFEYEAPGLHNREVNLYEIFGKWNIDSLLLSPKVYFSKKFDSENLTKGFFGME FVENAITRHLYINLKPYELHAVLKALAIFQAEGLKLNEEEKLSVTGYDLEKIVGKMFS ESGLKSIFEQAREINPEELSEVADRVDSFGLELVNFELVKNLNKYLGKARTFRKKNCL KSSGIKNDVLVHGDLWSANILWNEDVDGTYSVKKIIDYQSVQLGNPAQDLIRLFTSAL SGSDRRAYWEKLLEQFYEYFLEALENENNVPYTLEQLKESYRFYFVTGSLLMLPMYGP IAKVKLSEMTDPSEIEKCRDILTEKAERLMEDMEHWHLYTRDTIKKWQE" CDS join(78365..78523,78567..78965,79007..79256,79359..79462, 79913..80074,80122..80196,80245..80400) /gene="CBG09500" /locus_tag="CBG_09500" /standard_name="CBG09500" /product="Protein CBG09500" /note="contains similarity to Pfam domains PF02958 (Ecdysteroid kinase) , PF07914 (Protein of unknown function (DUF1679)) , PF01636 (Phosphotransferase enzyme family) contains similarity to Interpro domains IPR012877 (Uncharacterised kinase D1044.1), IPR004119 (Protein of unknown function DUF227), IPR015897 (CHK kinase-like), IPR002575 (Aminoglycoside phosphotransferase)" /note="Partially confirmed by transcript evidence" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR012877" /db_xref="InterPro:IPR015897" /db_xref="UniProtKB/TrEMBL:A8X8Z0" /protein_id="CAP29101.1" /translation="MSEEKKTTILDNGDGLFNTHVVLEDVQEVIGEQMNTKARLGENT KYTVVGDGNGFMSRVILVEPDWTVTDDHLPTKFVLKITSCMHVHGLVEKMRSTNPNAL SPEQEAGLWAMFENEAQQLHNREVNLYKITEKWNKNDVLLSPKIYFSKKFDANNKTKG FIGMEFVSDVTIRHLYANAKPHELHPVLRSLATLQAESLKLTDEERQSIAGFDFKQLM GSMMNDGGMKNIYEQTRDINRERLTKGADAIEVFGTEVVNFELACNLNKYVGIERNVL VHGDLWAANILWKEDDGKFSVSKVIDYQLIHMGNPAEDLVRLFLSTLSGNDRQTHWER MVDQFYEYFLEALGDQEAPYTIDQLKDSYRHYFVTGGLIMMPMYGPIAQAKLSYSSDN EHVEEYREILTEKAEHLLEDLERWHLYSRDLTKNHKEAETSV" CDS complement(join(80580..80903,80950..81246,81290..81388, 81445..81558,81627..81724,81770..81880,82157..82292, 82341..82394)) /gene="CBG09501" /locus_tag="CBG_09501" /standard_name="CBG09501" /product="Protein CBG09501" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8Y9" /protein_id="CAP29100.1" /translation="MNLLQVLLSSLLFMVECQVAPIVHPALLEGPQNEVVPSLIFPSN RVGSKNRLSTRVFRDASSQGYKGLVDSPRLFRASGRFHKRVQSATTHDIQNVPLPQDT LQIVSYKYDAEKHNEKKMSDNDIITNEEAEDHARGIERTTMSVKPREDETDKTVPMTT TTPMPEHNSINEIKENSITPARSKTFFQTVTTNGSAAPLIPNPQLPPQPQPPFVFTPQ PPISPPKFTMPSLVPQTIQQLPSSLPQQGIHPQQPPPAFPGNQMGINPVGVPHQPSNA LVAGVPNFNQPQQPVTLTPLGTNPTPAIGGIQQPNQVNPGGLPQQPQSALSPNRNEEK HDTHEQLGCGWDWLTNSCKDVFALNWCGKCHDFGNIFLHDCKCIAPLIPLPTTVRPSP PPPPPPAPQRHPLFFWLI" CDS complement(join(83565..83616,83664..83760,83827..83919, 84619..85792,85836..85929,85974..86308,86360..86493, 86543..86657)) /gene="Cbr-pqn-67" /locus_tag="CBG_09502" /standard_name="CBG09502" /product="Protein CBR-PQN-67" /note="C. briggsae CBR-PQN-67 protein ;" /note="Predicted" /db_xref="InterPro:IPR006150" /db_xref="UniProtKB/TrEMBL:A8X8Y8" /protein_id="CAP29099.1" /translation="MKRIFLCWLTIATTLQFVSAKRFMKMFADAGIGIHCPSGNKVYI HPISGDLQLCKQQLGVYNETSCPGGTACERFPILIPGFQDYCCWSEINPESESSTELE IVPPPMSKLKPGVTVEPIDEEEKVFPIDEEEEEDLKIEQKKSARKKISEEEEEEEDIE WEFETTTVKPRKTKSRKVPVITTTEPPIMETTTVKIGPSSRRPQCNDPNKTVLIDYGN RLRDCYFTQCLRGFKCEFNREIRRFICCGNEVDVPPAGLPPIPEPSPVIKRRPFRPNR PYNDGEEDEGNVDGENRGPRNPIVPFNQGGQFQGPIGPPKVEPMIENNIDSTAIPHPN KKSKYDEDDDYEDGDGNGHGGCGGNGCTYGRGRGGNQNSRGGCELNCRRNGGNNEGCG MSCRRENGNNGNRGGNSRECGNGGCPWNGNNGDGKRPRRPRPDTDYEENENGCEADLS GMNGGRNGNNNGPVPPIPEPKPLCKGLQFKKSGNGNGNGNGIGNSNSSNNRNNGPPPR NNGNGNGNSNVNGNGNGGDRPMKPTQASGSGSNRRNGPPRNGGNSGNGNSMNRSGGNG RRNNNSGNNNNNNGGDSNYGGGGDNCDFENRCGFGNGNGHGNDNQRFSSRKQPPPKPS SSNNNGDRKVPRSVPFFPSSQSSPTSICPEGAEYVDGFTAPKCLPPAIDSCPMSHKKC RYSSRFGHHVCCNSQ" CDS complement(join(86975..87154,87212..87571,87616..87796, 87884..87945)) /gene="CBG09503" /locus_tag="CBG_09503" /standard_name="CBG09503" /product="Protein CBG09503" /note="contains similarity to Pfam domains PF08659 (KR domain) , PF00106 (short chain dehydrogenase) contains similarity to Interpro domains IPR020904 (Short-chain dehydrogenase/reductase, conserved site), IPR013968 (Polyketide synthase, KR), IPR003560 (2,3-dihydro-2, 3-dihydroxybenzoate dehydrogenase), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR)" /note="Predicted" /note="contains similarity to Pfam domains PF08659 (KR domain) , PF00106 (short chain dehydrogenase) contains similarity to Interpro domains IPR020904 (Short-chain dehydrogenase/reductase, conserved site), IPR013968 (Polyketide synthase, KR), IPR003560 (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR)" /db_xref="GOA:A8X8Y7" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR020904" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8X8Y7" /protein_id="CAP29098.1" /translation="MSNKCHRFEGKVAIVTAATKGIGLAIAERLLAEGASVVIGSRNQ KNVDEAIEYLKKKGLTKVAGIAGHIASTDDQQKLVDFTLQKFGKINVLVNNHGINPAF GHILEVSDQVWDKLFEVNVKAGFQMTKLVAPHIAKEGGGAIVFNSSYSAYKSPPGIAA YGITKTALVGLTRALAMGLAKDNIRVNGIAPGVIKTKMSEVLWNGGEESEKDLTDAQE IALGRLGVPEDCAGTVAYLASEDSSYITGEMIIIAGGVQARL" CDS complement(join(89638..89757,89807..90082,90131..90385, 90434..90807,90852..90951,91055..91147)) /gene="Cbr-lipl-1" /locus_tag="CBG_09504" /standard_name="CBG09504" /product="Protein CBR-LIPL-1" /note="C. briggsae CBR-LIPL-1 protein; contains similarity to Pfam domains PF12695 (Alpha/beta hydrolase family) , PF04083 (Partial alpha/beta-hydrolase lipase region) , PF00561 (alpha/beta hydrolase fold) contains similarity to Interpro domains IPR006693 (Partial AB-hydrolase lipase domain), IPR000073 (Alpha/beta hydrolase fold-1)" /note="Predicted" /db_xref="GOA:A8X8Y6" /db_xref="InterPro:IPR006693" /db_xref="InterPro:IPR025483" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8X8Y6" /protein_id="CAP29097.1" /translation="MKSWGTVLLAVLATSATVYSHDADPEMKMTTPQIIMRWGYPAMI YDVTTEDGYILELHRIPYGKTNVTWPNGKKPVVFMQHGLECASDNWVVNLPTESAAFL FADAGYDVWLGNFRGNTYSMKHKNLKPSHSAFWDWSWDEMQEYDLPAMIEKALEVTGQ DSLYYMGHSQGTLTMFSRLSNDKVGWGNKIKKFFALAPVGSVKHIKGALKFFAEYFAP EFDGWFDVFGSGEFLPNNWIMKLVSQSVCAGLKVEADVCDDVMFLIAGPESNQVNATR VPIYVAHTPAGTSTQNIVHWIQMVRHGGTPYYDYGEKGNKKHYGQGNVPSYDFTNVNR PVYLYWGDSDWLADPTDVTDFLLTHLNPATIVQNNKLTDYNHLDFIWGLRAPKDIYEP IIEIIRKDVINGS" CDS complement(join(91581..91806,91855..92545,92828..93070, 93118..93614,93661..93757,93792..93977,94075..94218, 94261..94384,94433..95251,95296..95411,95618..95930, 95981..96231,96282..96566,96619..96817,96852..96959, 97056..97421,97466..97573)) /gene="Cbr-nid-1" /locus_tag="CBG_09505" /standard_name="CBG09505" /product="Protein CBR-NID-1" /note="C. briggsae CBR-NID-1 protein; contains similarity to Pfam domains PF07645 (Calcium-binding EGF domain) , PF06119 (Nidogen-like) , PF12947 (EGF domain) , PF07474 (G2F domain) , PF00058 (Low-density lipoprotein receptor repeat class B) (2)contains similarity to Interpro domains IPR000033 (LDLR class B repeat), IPR018097 (EGF-like calcium-binding, conserved site), IPR000152 (EGF-type aspartate/asparagine hydroxylation site), IPR006210 (Epidermal growth factor-like), IPR024731 (EGF domain, merozoite surface protein 1-like), IPR003886 (Nidogen, extracellular domain), IPR001881 (EGF-like calcium-binding), IPR013032 (EGF-like region, conserved site), IPR006605 (G2 nidogen/fibulin G2F)" /note="Predicted" /db_xref="GOA:A8X8Y5" /db_xref="InterPro:IPR000033" /db_xref="InterPro:IPR000152" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR003886" /db_xref="InterPro:IPR006605" /db_xref="InterPro:IPR009017" /db_xref="InterPro:IPR009030" /db_xref="InterPro:IPR011042" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR018097" /db_xref="UniProtKB/TrEMBL:A8X8Y5" /protein_id="CAP29096.2" /translation="MKHKKVLILLLLSLLLETRGDGTQEFYPFGQPAGDTRLKYSLDQ SAVALKTPLIFLQKPIDEIFLSHNGIIGLGKPVPEKNEILAKIPTPAIAVFYSPVANG KIDYRVTSDDQGLLAKLTQDVKQAFTDAVDFHGLQAVVITWSDIQNAEQDGPASFQIA IVTDGISTYCINHYGALPWSSSMGYYAQTGFVRSVQMSRNFLRKIHLNNLGAKNDFRL SNNQFGNSFIFRISGNSIEDPKDDGTDEYDYNNYDQEYEGEQPADCPKDKFVDNCPAE CRTVRDERGCERCICAERPNAPPVPQEPRPELENTVDDDDDEEEQVDGTRYQEPTREQ EQQPQPQHNQHHQQSAGQTAQKMSCSQRDDKSCHANSVCQDLEGGFCCTCDTGYYGNG KECLPKGEPQRISGSFEGVINRIPIDKTELHTFATSTDGNVHTAVSKIPSDLGHPLLF LYSIGGVMGWLFADVQSPNVYNGFQLTGGLFNRTVAIHVGQNNYVTLKQEFSGRNIHD YFKSHLFVSGTLPDIAPGSEVIFPDYEEEYVRERRGYLTSRAAFDVIIRDGGNTQTYR MSVEQQITFEECPFKEFDRDHSMKLHVKRINVVYNADEGVVRYGAKNFATRSTSPASN SAPSGGHFDRRQHGQSQLASERPIEIPYNNEAISSDSVCAPGRHQCTLPNMKCRVVDP SYRCECEPGYQATHDASSHIGWICQDLDECQRGDHNCDQHAKCTNRPGAFSCQCLPGY QGDGRSCIREQHAGHHEHHQHQQQSQHSGVGATSEGLCTAHNQCHQWGECVFTSEHPT GRCKCRGWYVGDGVNHCGPPEENKPKHNAHIPQNRGQACGSYVCDVNAECMPEPSGGS ECVCKAGFSGNGITCESLLEDRHAHSSHNRHEQQQQTGSLGKVCRSHEECSEHGSCAY HHNLGYYQCACTEPYVGNGVDCTLPGSSASASDLGCDVTRDCSEFADCVYERSSTGAT FRCVCQSGYTGDGKYCMQSQLAISALSPAGQYPSFPQLQSQPSVQSIASCDPNCGADA QCVYDEHNKQYRCECYTEFVGDGFNCVPLAKPNMVPAEPKTCVESSDCHSNGHCVIDE NGAGEYICKCLPGFRGDGFLNCRGADQCNPSNPNACHQNAHCAYDEVLTAHACKCVDG FKGDGVNCVPYAPATNCNLEPRICHANAQCVMHHTTGAYECICKPGSSGDGYKSCDVM DTPRCTNCSVHAYCAQNQMTGAYQCKCNAGYNGNGYVCVSMSSCLDDRSLCDSNADCV PGEGGHYVCNCHYGYHGDGKTCSPDSSSRTDKLLVARGMAIFKRSTNPDEYGKQLIVI PHHIPVGIDYDCQTEKIVWSDMSGHSIRTASMNGTDHKSFFSKELSSPEGIAVDWSSR NVYYADSMNDEIGVASLNGKFKKSLVTEGLVNPRSVVLDLYGRHLYYSDWHRENPYIG RVDMDGKNNRVFLNEDIHLPNGLTILPKRRELCWVDAGNHRLSCVQFNGANRRTVFSS LQYPFGLTHDQEQKFYWTDWKDNRIHSVGVYGEGYRSFQISLGGSGKVFGILAVPKSC LGPNTPCSENNGGCEHLCLPGQNGAVCECPDNVKVKGC" CDS join(100959..101145,101191..101318,101366..101503) /gene="Cbr-ttr-29" /locus_tag="CBG_09506" /standard_name="CBG09506" /product="Protein CBR-TTR-29" /note="C. briggsae CBR-TTR-29 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)" /note="Predicted" /db_xref="GOA:A8X8Y4" /db_xref="InterPro:IPR001534" /db_xref="InterPro:IPR038479" /db_xref="UniProtKB/TrEMBL:A8X8Y4" /protein_id="CAP29095.2" /translation="MFIKFALLFVLALAFCEGAENATISKNILGIGRMQSVAVSGRLI CQGRPASNIKLKLYENEILFDRLMEEGRSDSNGQFRLSGSKREITSIDPKLNIYHKCN YNGLCYRKFTIKIPKDFVNTGSQPERTYDIGTLNLANRYSGESIDCIN" CDS join(102629..102815,102863..102915,103049..103186) /gene="CBG09507" /locus_tag="CBG_09507" /standard_name="CBG09507" /product="Protein CBG09507" /note="contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)" /note="Predicted" /db_xref="GOA:A8X8Y3" /db_xref="InterPro:IPR001534" /db_xref="UniProtKB/TrEMBL:A8X8Y3" /protein_id="CAP29094.2" /translation="MVTFFVVLLCLSAGILSQNVENIVPKNILGIGSTQSVAVSGRFI CNGRPAANIKLKLYENEIMFDRLIQESRTDSNGQFILCDQKFTIKIPKDYVTSGDRAS RTFDIGTLNLANNFPGQSTDCIN" CDS join(103426..103591,103642..103907) /gene="Cbr-ttr-27" /locus_tag="CBG_09508" /standard_name="CBG09508" /product="Protein CBR-TTR-27" /note="C. briggsae CBR-TTR-27 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)" /note="Predicted" /db_xref="GOA:A8X8Y2" /db_xref="InterPro:IPR001534" /db_xref="InterPro:IPR038479" /db_xref="UniProtKB/TrEMBL:A8X8Y2" /protein_id="CAP29093.1" /translation="MSVSSTCFFLLFALISSTSALLGIGRTQSVAVSGRLICNGQPGS GVKLKLYEKESTFDVLLEEATSDSNGQFRLSGSKTEISTIDPKLNIYHKCNYNGLCYK KIGITIPDNYVSSGKTPGKTYDIGTLNLANQYSGQTTDCIN" CDS join(111182..111376,111424..111490,111716..111930, 112285..112709,112756..112905,112952..113098, 113142..113367,113457..113676,113725..113835, 113890..113999,114044..114346,114461..114682) /gene="CBG09510" /locus_tag="CBG_09510" /standard_name="CBG09510" /product="Protein CBG09510" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8X8Y1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/TrEMBL:A8X8Y1" /protein_id="CAP29092.2" /translation="MTSSSEGEILQVGQVIRERWKIVSLSGENYCRIISFQKAKIGGG GFGEIYEATDVQNHHERVAIKVESSKATKQVLKMEVAVLRRLQGKKHACKFYGCGRND KFNYLVMSLQGKNLADLRREAPKQCFNLSTAVRVGLQILNGIREIHSIGFLHRDVKPS NFAMGRTSQTMRNVYMLDFGLARQYLNAKGEIRSPRSAAGFRGTVRYAAVTAHKNKEM GRQDDLWSLFYMLTEFLQGQLPWRKIKDKDEVGKMKEEADLNALLDDCPNELHLFAAH LKTLGYADTPDYNYLESLLNKIVKDNDISWEEPYDWELGYDNMASRQKQQTNGNISAR LKSHTTAVIRDQRNENRALDTQAPITMGEDEDEQTNGQMANLGAGFESAHEKAAEKPK YKRHEFLKPKYGTVNLDVIDAVNARFAACDEENYRGGSADVEANFQLPSSILKTQAQV AESSLSIKRVAGLPVDKTRSNKSITLSINNRYKSGAKTNKISSFDNTNAQMDDNSANN VRTAQTIMSKWQGSFDASCEEMMDGADTEERAQGRLNPAFPVPKASLLSTPRSMDSNT SPGGNSPSSPMNPRASPIQQRRLSRSEKDRNGMHRTASCGAPQSNSIISHFKGLINSF NNLGVGSRLSRTTSIDETANRQNSAPPPTSQHQTAYRNDDNSYGMRHSTSMGVQNSQN TQRISATFNAFESPEERERRRERRMRRRSVESNGRVSFSFKVELETPPPSVRSPVIVN KSSVVHAPANSPPVKIRDNGIDEEFRIPLEENNKPLLFYKRKRYQFLNFPRTSSKS" CDS join(119608..119670,120560..120633,121049..121154, 121602..121712,121763..121832,121882..122336, 122445..122534) /gene="Cbr-glb-24" /locus_tag="CBG_09511" /standard_name="CBG09511" /product="Protein CBR-GLB-24" /note="C. briggsae CBR-GLB-24 protein ;" /note="Predicted" /db_xref="GOA:A8X8Y0" /db_xref="InterPro:IPR009050" /db_xref="InterPro:IPR012292" /db_xref="UniProtKB/TrEMBL:A8X8Y0" /protein_id="CAP29091.1" /translation="MERPFALPYDVSPIYHPFSKLTMDHSMMPVISITRTRRCSVSSP LRFTRTFSEDSLDSLEKNGRKELRRQRIMENGSSIDQEKNCLSPLTHTTCPHLGQMGR SRTECPEVESLRLPLMAKRSAGDLSCPPSPTRRNLNEVIGLTAYQQKLLTQSWPNIFT TGASGPFANSLFATLSARNAKAKELLTKANGVAVFAKSDMDCSMMHCRVTVEVLDTVI KNLDADHSRVTQYLTEVGKQHRHLKAEGLSSAVWDDLGDTIMDCARRRCEAVRKHKEL RRAWLAIIAYIMDNLKQGQSVTRASSSYDLTNDSSKIPCSKKNSGN" CDS complement(join(123303..123359,124711..124798, 124850..124928,125033..125171,125216..125310, 125560..125626,125996..126156,126268..126361)) /gene="Cbr-bus-19" /locus_tag="CBG_09512" /standard_name="CBG09512" /product="Protein CBR-BUS-19" /note="C. briggsae CBR-BUS-19 protein; contains similarity to Pfam domain PF09335 SNARE associated Golgi protein contains similarity to Interpro domain IPR015414 (SNARE associated Golgi protein)" /note="Predicted" /db_xref="GOA:A8X8X9" /db_xref="InterPro:IPR032816" /db_xref="UniProtKB/TrEMBL:A8X8X9" /protein_id="CAP29090.2" /translation="MTRLFILPAIFGISSLSLWYMICSAPGWPESEGGVFEIPKQFDN FTVLADKFRAYKEDHFGYITTLFICAYLYKQTFAIPGSFLLNVIAGVVYDLWSGFILC CCLTTLGSTLCYLFSELFGREYVFYYFGQKLTYLQQKIDDNSNRLLPFLLFARMFPIS PSWLLNIVAPFLNIPLPIFVVSALFGLAPYNFICVQAGYILRDLRSWDDVFSTTTMLK LFSFALIPLAYAIYIRPRANKHQLVSSSDEIDEKVKKMEIV" assembly_gap 123795..123925 /estimated_length=131 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 134606..135010 /estimated_length=405 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(135411..135650,135706..135756,135800..135936, 135982..136303,136353..136515,137838..138007) /gene="CBG09513" /locus_tag="CBG_09513" /standard_name="CBG09513" /product="Protein CBG09513" /note="contains similarity to Pfam domain PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) contains similarity to Interpro domain IPR000504 (RNA recognition motif domain)" /note="Predicted" /db_xref="GOA:A8X8X8" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR035979" /db_xref="UniProtKB/TrEMBL:A8X8X8" /protein_id="CAP29089.1" /translation="MDQDEEELSATPPQSSRSESEGPSDAPESVIETIEPVVILAAPI QQLPAISLSGNNAQRTLWIGDVPTDWSEDTLKQVFTESNHPPYKVKRVYVKDELKGYC FIEFVTFEEARQALFDLNGKRITGFKDIRFNLCFANDSYNPNSEFNLHVSSVPEEMSD AELYRIFDKYHSCRGAKMFRYIDGASKGSGFVRFGNQTDQQMALVEMHRTRVGNKRII LKLAGSRGEKLDRNEPSSYRSQRNERHRPEKSHRNGTLIPTAQHVYDAFGNPVVVPVD KNIYGTDHPWGPFPDDPDLDPIIGLDLLTTKYRPQISNKRLMIDTDQFMLDLESSRWS SIAFKTNIKQEDLEKRLADNPWTAIP" CDS join(138396..138464,138842..138966,139010..139093, 139137..139328,140643..140722,140768..140910) /gene="CBG09514" /locus_tag="CBG_09514" /standard_name="CBG09514" /product="Protein CBG09514" /note="contains similarity to Pfam domain PF06879 contains similarity to Interpro domain IPR009673 (Protein of unknown function DUF1261)" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8X7" /protein_id="CAP29088.1" /translation="MVPIFILLTILYSSYGQDCSTPQTLYTCYISYLGKYGVVPDDGY LPRSEFLLTQMTTHGLPVICKDFDELTGCLGTASTYCVNFNVFYSYANGRDPQREALA YLQNHAFFEFACGTGKGLFMNNIDCLQRSFEQVPLTNRMQQCGQSSLVVNDNSCPPAL EVTDCVRQQIVQACGQSAGAAACGAAANIERRLDFLDAACLTEMDARCSVCQLKILTS FILFFIHRVIFS" CDS complement(join(141160..141388,141433..141579, 141623..141790,141839..141973,142021..142566, 142631..142842,142866..143096,143147..143354, 143400..143584,143637..143990,144039..144251, 144535..144700,144750..144895,144950..144985)) /gene="CBG09515" /locus_tag="CBG_09515" /standard_name="CBG09515" /product="Protein CBG09515" /note="contains similarity to Pfam domain PF01433 Peptidase family M1 contains similarity to Interpro domains IPR014782 (Peptidase M1, membrane alanine aminopeptidase, N-terminal), IPR001930 (Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase)" /note="Predicted" /db_xref="GOA:A8X8X6" /db_xref="InterPro:IPR001930" /db_xref="InterPro:IPR014782" /db_xref="InterPro:IPR024571" /db_xref="InterPro:IPR034016" /db_xref="InterPro:IPR042097" /db_xref="UniProtKB/TrEMBL:A8X8X6" /protein_id="CAP29087.2" /translation="MTSVYRYDSFSQMGHPPPKETKKSCQVRTFALPIVCTLLGIVIT AFITWHITRAQYEKNIGNDAPTTTSSPEDAIPASDLRLPTSVSPISYDLVIKTYLPGY NYTADSKNLTFEGQVTIKLNITKSIKKITLNSKDLNFTGERLKKSTLYVNGEQITFKV DDKQDTYEKIFFNLDKTVEPTTDAILKVFFGAPLRTDMSGLYQTTYTNSQGAVKMAAV TQMEPVYARRMVPCFDEPAYKATWTVTVIHPKGTVAVANGIEDKTEDIQEEFISSSFK TTPRMSSYLLAIFISEFEYNEATTKSGVRFRVWSRPEEKNATKYAVEAGVKCLEYYEQ YYNISFPLPKQDMVALPDFSAGAMENWGLITYRENALLYDPRIYPGSQKRRVAVVIAH ELAHQWFGNLVTLKWWNDLWLNEGFATLVEYLGTDEISDGNFRMREWFTMDALWTALG ADSVASTHPMTFKIDKAMEVLDSFDSVTYDKGGSVLNMVRKTIGEENFNTGINHYLTR HQFDNGSCYKLPDNVIGPKGDKLNISIFMDPWTKQLGYPLLKATRMNKTHLEVTQSRF KALQSGKEEEKYSHPIWNFKWDVPVWYQIAGSSDIEMKWMKSNEPLIIKSDKPVLLNA ESNGFYRAGYTDDMWKEIIYMIKENHEVSVFFSKLLFKCIFQQFSTQTRVRLIDDSFA EARAGLLNYSVPLQLLTYLKNEKDYMPWSATIAKIRELVDMYGTDPEKHVVYKFMIAL AEKTPAKRDIDFVSKNYLDDKKFFEVNAAQIILLNDCGMGEPSCGANMVKLFNDEVNS KCDSSRILSECSQIAAPFRAEAYCQAVRNGNAETFNKVFHWYKTERNQVEKGNLMNAI TCSKDIMTLKKLLLDSMKPEGSAFRLQDVATLFSKICTNDATSDSMLNFLIDRWDDMM IRLAGDHSGFHRVLSSIVGTLKTQGGLEQLRSFRNKNAKANELGLDKMEETSEVTIKW RKDNQKFVTKFIEDLTNQL" CDS complement(join(145462..145630,145673..145917, 145962..146180,146227..146742,146789..147131, 147176..147360,147405..147675,147724..147911, 147955..148180,148305..148411,148818..148916)) /gene="CBG09516" /locus_tag="CBG_09516" /standard_name="CBG09516" /product="Protein CBG09516" /note="contains similarity to Pfam domain PF01433 Peptidase family M1 contains similarity to Interpro domains IPR014782 (Peptidase M1, membrane alanine aminopeptidase, N-terminal), IPR001930 (Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase)" /note="Predicted" /db_xref="GOA:A8X8X5" /db_xref="InterPro:IPR001930" /db_xref="InterPro:IPR014782" /db_xref="InterPro:IPR034016" /db_xref="InterPro:IPR042097" /db_xref="UniProtKB/TrEMBL:A8X8X5" /protein_id="CAP29086.1" /translation="MTTNFQVDSSFSQHRNKCIQARTPVWLQSNGEKYQCAITHAPLA LLFYFWAYFYFGFLPFSYTFSDSCWNETIKYTNFPLPTAIFPVEYDLNITTYLPGYNW KADERNMSYLGSVSIRMEVRQEMDKIVLHSSNLTIIDAKVINSDNNLEIKSWTINDSN QFLILSLNKIVNPGENLEVFITFGGYLREDRKGYYITKSTKPTGEPMINAVTQFEATS ARFMVPCFDEPQFKATWQVKLTYPTGAVGLTNTIDMESIEDGDFTSTTYKRTVKMSSY LLAIFVGDVQFKETTTKRGLRIRVYADPKNIESVDMALNASRLAVDGFEELFGIDFPM EKIDFVSVFDFEAGAMENWGLIIHRAELILGTDKEIVEVVIHELAHQWFGNLVTMKYW YQTWLNEGFATFMTAIGQTFIDGNFSQDTVSCAWTTPHMSLLKFHISQQEEARLKDRY RPLRSVAFDKDGSVTIQSIYYSKGSSFIRMLEKIVGTLNFYEAMRNYLSQNMYSNVKE DYLYSALEAVWKTNTNNETTLSISEFAECWTNQNSYPTVFATRTPEGVVLTQNREAPI EKNYTNYDECGYKWDIPIWYQVAGEGSHELVWFKKDQYELEIRTEKTIIVNAESYGYY DVIYDDVSYQSIARELENNPTLYSMSTKLRLLLDLESNAYTQMIAPHSLVLIANALRN DEFPIVQEYAQTILKTTEFMINRLNEQNNEDLKIIKGFSTNTSKVLRKFYSNPSEQFG DYFKRNFKSDKEFCETLRNERNEEVTNQLVDWLNTNDSSGRKHIMGFLMFCAKNKDKV RGLVFDPSFDWTALEKSRNIQFLKILNRRNIYETREFRKFPSNEEYISRKTIIRIES" CDS join(153250..153304,153396..153853,153897..153984, 154080..154205,154250..154344,154398..154512, 154560..154646,154690..154794,154838..155151, 155197..155535) /gene="CBG09517" /locus_tag="CBG_09517" /standard_name="CBG09517" /product="Protein CBG09517" /note="Predicted" /db_xref="GOA:A8X8X4" /db_xref="UniProtKB/TrEMBL:A8X8X4" /protein_id="CAP29085.1" /translation="MTVFWIHLLLLVVVVAGKSNLKRPSFPDDLYPANMTRLEFRKKC SLQSNKLDYCILQYKACVGTLTTVRNCNARFCLCTKSTEDDLDEFDEECSQNDACTSV HINGPFYKNIIIEEETKPAMKNIEKHLRPLFEVHQVVAKSCEIELELELAEKKMIEDF NSTTPLLNLTLKLFAIANVELHKTEKCHAALDQYRKVLEDVDTKTAGSLHIPYNLWFV GAEMGPIGRVATRIIADEMCQKSSLEFNHQSVSRVACYDQQDGQKKCDELFSKNVKRT LSMLDSKKIRCQMFVELIETLQSALAAKFYSEAAEYDVDPSTVQIGDKLFEKGFEASE DQSLTQRDTKSIIISLESSTNTTSLRVKQYFEKVSLECGNSRNSADVVASCGYMYANC VRENRKNCQKDLPICLKDIDGMRQSCEHAISKLSDLLWPSSKETRGMVAPVSVDDTEE SSWSIMSPTIQWSLFFLGVFAFIAMMVLIIVKTPKTRVTCKKFCGENQTGNDNTLEDH GTLLPSGSEAEIAISSSSDVISSVSDSGISLPSADSENSGIDINNGNIPIIESALNNN QDTLTSGDIKSEVVSIREFPAVLKSSP" CDS join(157882..157971,158087..158173,158395..158482, 158529..158620,158670..158763,158817..158936, 158980..159275,159324..159887) /gene="CBG09518" /locus_tag="CBG_09518" /standard_name="CBG09518" /product="Protein CBG09518" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8X3" /protein_id="CAP29084.2" /translation="MAVKLCTPQYDNCLTSIGQDCYKSLDICIAKNETNYSMELFERH TFKDSLMTNKKEECNFYYGGLKNVKCWKEVDRLLAETLCGETSTFLINHEWAKQADCL EDPALNNCTLAFNEGLQRVSKKSEKPLFCLVYVEIVTKSIQFFNSTSSDYKIVYVKLD FTDSIRFRDDELYLINQTNRDISLECFPVKRSLNAYNYTFHHCKRHSVSKCEEEFVEY LKKDKGITKKCASVVFPRNNSSGFPKQLGLFLWSHKWTCFIFCTVTAIIGCSKSIRNW LVKKLAIKTFTYLAKQLDAATKYFDNLLPANVATQGEPSQIESSISETQMDEPRDDNN QNVDQNASPLLPVDYQCSTSSLTSTYENQNENQQEENQQNNQDASNTLVNTVSIENLK KGKAEESKKEKSTFSSSSTNFLRSFRNMICSLTRVTWALGISPAYIFFRQSSYRTERS SAATKNPNENNVNPSQTAILIPSDNN" CDS complement(join(160075..160312,160351..160676, 160720..160872,160917..161014,161059..161246, 164725..164896,164940..165087)) /gene="CBG09519" /locus_tag="CBG_09519" /standard_name="CBG09519" /product="Protein CBG09519" /note="contains similarity to Pfam domain PF01697 Glycosyltransferase family 92 contains similarity to Interpro domain IPR008166 (Domain of unknown function DUF23)" /note="Predicted" /db_xref="GOA:A8X8X2" /db_xref="InterPro:IPR008166" /db_xref="UniProtKB/TrEMBL:A8X8X2" /protein_id="CAP29083.2" /translation="MDPKSFRISLIAVFIFTLVILYSFNATPINLPTQSSSNVVVTRD SLNPKEFPNYKIDGMDRFEWYTKKWKEELKNEKPPEVEEVTLLRAYEFDVEYSISITT PNKYKAIVYCRYFGKNGTEMLPAFQSYNFPEFVVNCQKRKGTHRLSVSTQANNSYTYP IELIDRTQKVYDHEFSFCMSNIYGKEPKWLQLSEIIEHYKLQGMTHFYFYVFHIDEYS NALLQDYVRTGEATVTHFLERNDRELLHWQIVAFRDCTLRTRHVSKWSLFSDIDERLL MTKYPGTILDYLREVKDDSVAGIQFRQQWIMKTEFLPEKYEGDKQVKICIFSKRNFKV FRLMNGLRLFVGTILPLSDHQDTLSNALPSMMYPGYHIHELKPEEGLVRHYRDLQMWN WGKTWLKEIVAMGPMSMTDYPAKYQKNLTDAVKTRTKYVYENYHPREE" assembly_gap 162098..163376 /estimated_length=1279 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(167489..167563,167736..167820,167883..167959) /gene="CBG27084" /locus_tag="CBG_27084" /standard_name="CBG27084" /product="Protein CBG27084" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHG0" /protein_id="CAR99340.1" /translation="MLLWNNLLSVLNALVYSVENLDGFENGLLDDASIINTTFVGDSE VHQYNQGTEDVRCRVALIFAKYAKPVSKKTSIKI" CDS join(168221..168269,168333..168619,168666..168760, 168809..169766) /gene="CBG09520" /locus_tag="CBG_09520" /standard_name="CBG09520" /product="Protein CBG09520" /note="contains similarity to Pfam domain PF00182 Chitinase class I contains similarity to Interpro domain IPR000726 (Glycoside hydrolase, family 19, catalytic)" /note="Predicted" /db_xref="GOA:A8X8X1" /db_xref="InterPro:IPR000726" /db_xref="InterPro:IPR023346" /db_xref="UniProtKB/TrEMBL:A8X8X1" /protein_id="CAP29082.2" /translation="MTRIRLVILAVSVFLAHNSIVTAIDYGSASACPKAAKYGTGPPE SCTEPTDPNNMPASELESWFTKEMFEDLFPFANLGWGPVSCWPYSYEAFKIASRYFPE FGTSINVTNTVYTADENKKRDLAAFFAHAVQETGENNIALYDTLSDQDASNCFYRGGF YNWFEGGPTSSFLDPKTPGYTPADGSSCASAGQYCSASSQITYFYPCSNETVENTAAP YKGCYFGRGAIQISYNYNYGQFQDWLKSVNIDVDLLNEPNLVMTKMDPPLAVLASLWF YMTPQPPKPAMHDIVMGNWNSGAKNQVAGYTGPIFGPTSLIINNECSGEDPTNPGGPG ESRRIKAFKWFCGYFDAPTGPEETLSCKSKSVFANENLIIAISDMPVPLDQIFYNLSF QPDWSSTWKEVPCTCAPASYGGLIFYYDPDYYPDSFVAQNDYNRLKCIASIYANPSMY SMDNKTSPCLNY" CDS join(170069..170155,170202..170573,170618..170958, 171012..171173,171225..171462,171511..171579) /gene="CBG09521" /locus_tag="CBG_09521" /standard_name="CBG09521" /product="Protein CBG09521" /note="Predicted" /db_xref="GOA:A8X8X0" /db_xref="InterPro:IPR040128" /db_xref="UniProtKB/TrEMBL:A8X8X0" /protein_id="CAP29081.1" /translation="MPKKPCAKPGAEIEIISMVMKILDWQWETIDTEKEFNVVNDFGN PKPDGNFSGIMGLLAEDKIDMSGLSMRITPARMQFAHFTFPIRYFQQVYIIKRPPEND FRNFVFAPFTTDMWLLLLATIMGVSTMRFACALYWDSRVGSKFNIYTSSVLETFGLML KQRVQDPTAISTMLLEGFLIVAMMSIAQYYQTSMNSRLTAPPSSRIPFYHQNQLIELL LDKETYLTYYFNLSLEGSTEKNEYNIKRAMAINPIVVRAKEVDLIKEVHKGGVFYSTY DIEFLPQAVSVWDKRQGLTVIRDTTGIISYVAFGFSISNRKLCQMFNKALLKILPGIA SITLGPGYGTKKQAEDITVQVKKTRLSFKKHLEQLFYIYLIGCGISLALFILEKIFYR VKVINRQKIYQVNRQESDVTPECTFTPLPY" CDS complement(join(171596..171640,172252..>172353)) /codon_start=1 /gene="CBG09438" /locus_tag="CBG_09438" /standard_name="CBG09438" /product="Protein CBG09438" /note="Predicted" /db_xref="InterPro:IPR005047" /db_xref="UniProtKB/TrEMBL:A8X8W9" /protein_id="CAP29080.1" /translation="KLYLINAFVQAILFFRQMIIIVPDDCYFKMDLIQLMRGNNLYSI HFLE" CDS complement(join(171700..171885,171933..172145, 172195..172323,172371..172499)) /gene="Cbr-srxa-18" /locus_tag="CBG_09522" /standard_name="CBG09522" /product="Protein CBR-SRXA-18" /note="C. briggsae CBR-SRXA-18 protein; contains similarity to Interpro domain IPR005047 (7TM GPCR, serpentine receptor class xa (Srxa))" /note="Predicted" /db_xref="GOA:A8X8W8" /db_xref="InterPro:IPR005047" /db_xref="InterPro:IPR017452" /db_xref="InterPro:IPR019430" /db_xref="UniProtKB/TrEMBL:A8X8W8" /protein_id="CAP29079.1" /translation="MAYQAKFFIAILMAVNRLWVVLIPIGSEAFSTKRLKIYMVVGWA ILFFRQMIIIVPDDCYFKMDLIQFQVMAVCEDKEKHAFRMKINSYISKFIHILLPWSS VFVNILVVLILKFRKRKNKMATSKGENSLVINSLVVSLLLTANYIYNDWYTKLKPTIS QQSHEIQSLLSLFNLYGCTCFNFIVYFLLDPTNRKNFIDTLKNRKPNQVVTRIVTTML " CDS complement(join(172936..173115,173161..173297, 173844..173949,174890..175284,175338..175435, 175671..175738)) /gene="Cbr-srxa-19" /locus_tag="CBG_09523" /standard_name="CBG09523" /product="Protein CBR-SRXA-19" /note="C. briggsae CBR-SRXA-19 protein; contains similarity to Pfam domain PF10328 Serpentine type 7TM GPCR chemoreceptor Srx contains similarity to Interpro domains IPR005047 (7TM GPCR, serpentine receptor class xa (Srxa)), IPR019430 (7TM GPCR, serpentine receptor class x (Srx))" /note="Predicted" /db_xref="GOA:A8X8W7" /db_xref="InterPro:IPR005047" /db_xref="UniProtKB/TrEMBL:A8X8W7" /protein_id="CAP29078.2" /translation="MIEKTPRLLHHNMDIVYREVSQTVISWMESAFRLISHTFLATFS ILFYFMWYLKIIIKSKAYITHMIWVEILLNVCQHFSVEYVLMTDDQSAVYVFKLVCIL FMSIQMWTVNTIRYTMTFLMAVNRFICMVNPKFHKFFQPDTITFFGIGIWMLSFLGSW YLLLLGCFPHFNTDTFVLNTDCEYFQWPDFVYKSHYLLVLTLIMNILKVVYAKLRRCG FFKVAVARVSVVAANRRSRLQTYFVIQSFIIFLVMIYDAAYTSFRRSFEPQFKFLPKN VQILLGWFNIYSSNYINFLIYFVFHKANRHLVFRAIFCDPKWLKPKKIRPT" CDS join(177449..177454,177743..177886,177933..178071, 178122..178192) /gene="CBG27083" /locus_tag="CBG_27083" /standard_name="CBG27083" /product="Protein CBG27083" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHF9" /protein_id="CAR99339.1" /translation="MKFGSSFMPMYILCRDPETDTFHRRGGAVLGIKEKKKRVEPNRW VTVFYSERNIGYYLDYLREISEHDLEKEDIIMDSVYECLRNPHPDIKKNEIRGQMETD KEEQIAKIVENRWDERL" CDS join(183069..183099,183461..183849) /gene="CBG09525" /locus_tag="CBG_09525" /standard_name="CBG09525" /product="Protein CBG09525" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8W6" /protein_id="CAP29077.2" /translation="MSDKAMNTFTGPPGVASVPVPLSNPVTPAPIRPQPTVAQTTWAP QVDQTNTWQPSQQEQQPQQSNWDQDNQQPQAERWNPEWRERGPPPPHWRDRGPPPPDF EGWHHRPPWRRGPWWGRPPPPWGPPPPGPPPFGWRGL" CDS complement(join(184028..184190,184604..184963, 185015..185283,185333..185510,185562..185656)) /gene="Cbr-aos-1" /locus_tag="CBG_09526" /standard_name="CBG09526" /product="Protein CBR-AOS-1" /note="C. briggsae CBR-AOS-1 protein; contains similarity to Pfam domain PF00899 ThiF family contains similarity to Interpro domain IPR000594 (UBA/THIF-type NAD/FAD binding fold)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X8W5" /db_xref="InterPro:IPR000594" /db_xref="InterPro:IPR035985" /db_xref="UniProtKB/TrEMBL:A8X8W5" /protein_id="CAP29076.1" /translation="MTEEIDNVQVSKQELEIYDRQVRLWGMEAQTKLRNAKVLIIGGT QLGAEVAKTLSLAGVDEMHLVDHNLVKKAEIGSNFLYDASVDNTTLTRWAAAHAFLSN LNKNVKLSIVEEDILSKSDEEIEEFIRGFTIVIVLDENYERTAKLNAICHKNHIRFIS GAIFGWVGYTFFDFDGHPFLTKVTPAGPIDRVDLENDAPKVTNTVVTVEDDRFEPKAF AYPTFTEAFNSDFSSKKVIRKCKRIIPSSYFLVKTMLRASKENKLTGDSDKDIEELVP IWKEEVLNGNHTLEMQPVHPEKFNHLFSPEFSPTTACVGGMIGQEAIKTITGGKDPIR NIFIYSALDSTGIACDFPLA" assembly_gap 184459..184468 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(186045..186154,186206..186481, 186525..186580,186627..187377,187422..187802, 187851..187990,188066..188179,188230..188297, 188348..188661,188933..189014)) /gene="Cbr-hpo-22" /locus_tag="CBG_09527" /standard_name="CBG09527" /product="Protein CBR-HPO-22" /note="C. briggsae CBR-HPO-22 protein; contains similarity to Pfam domain PF00400 WD domain, G-beta repeat contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR001680 (WD40 repeat)" /note="Predicted" /db_xref="GOA:A8X8W4" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:A8X8W4" /protein_id="CAP29075.2" /translation="MHQNSLGPATSGIGGNLNTAYPPSQNDCILLQHAQPGREEREIK KIFAIEDGVYQTVKHAEISRPKPLSHYQVPPGLVAAANQMAGASSTVRVSFLDFSSRD VIQPDVAVECSSSYDPNKQDENGSPMMRSQNEENEKSIICFNVGKELYMYAYRGTRTK TDLTRPIDKRVYKGTAPSCHIFNQEKSSASTSQLLIGFTLGQLQIIDPLDKISATPSS KLYNEDRYIEKTAVTCLRFLPGEPNIFLSSHVSGNLYVYDERISAISSSGNGSSQSPP WHVQTQVLSIDLIGYRMFFPVQGYGYTTYSWKTKHPRNPTTRWQIGSGTIHQFNFSGP DTKMLATVSHDGFLRIFNYETQELMSCMKSYFGGLLTLAWSPDAKLIATGGEDDLLTV YDVAEKKVVCRGQAHKSWISQVQFDPYVVRRSKKDPESNGRSSMTALDDVSREMDTRC MPSTSTDPNFGYTKPTSTMSRNSLASASVTQRADEIVYRIGSVGHDTFLCLWDITNEI LNKGNHRRHRNSTIIATNAALDIDHLSGKLEDLPELSPGVGEPSTNSEQPLLDANRPA PPQEKPPKKKRFNRKAFGLSKFTSSGNASTSTSAVGSRANPTNANASSVDIVARLGSP SCPGIRDVPIIEPLTCKKVSHDRLTVLEFRKDCVVTACQEGFICTWSRPSDRDDVKQD NLSSTAAATPESEQKPSVSATASFGYGSEISNGVTGSRSSSNFSTHELQQLRSPNATS PSYRVGASTSAYHRPMYAWQNAN" assembly_gap 189794..190198 /estimated_length=405 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(190969..191058,191107..191335,191384..191640) /gene="CBG09528" /locus_tag="CBG_09528" /standard_name="CBG09528" /product="Protein CBG09528" /note="contains similarity to Pfam domain PF00929 Exonuclease contains similarity to Interpro domains IPR013520 (Exonuclease, RNase T/DNA polymerase III), IPR006055 (Exonuclease)" /note="Predicted" /db_xref="GOA:A8X8W3" /db_xref="InterPro:IPR012337" /db_xref="InterPro:IPR013520" /db_xref="InterPro:IPR022894" /db_xref="InterPro:IPR036397" /db_xref="UniProtKB/TrEMBL:A8X8W3" /protein_id="CAP29074.2" /translation="MSTLYHVCDKIEQRIIWIDCEMTGLNVEKQTLCEIAVIVTDSEL NTIATGPDIVIHQPKEVLDNMEEWPRKTFLENGLMEKIIDSKYSMNKAEDEVIEFLKL HALPGKSPIAGNSIYMDRLFIKKYMPKLDEFAHYRCIDVSTIKGLVQRWYPDFKHPRK ACTHRAYDDIMESIAELKNYRESIFVKLNTP" CDS join(192097..192102,192157..192246,192690..192781, 192830..192932,196090..196219,196270..196394, 196609..196775,197365..197476,197826..198022, 198071..198269) /gene="CBG09529" /locus_tag="CBG_09529" /standard_name="CBG09529" /product="Protein CBG09529" /note="contains similarity to Pfam domain PF10320 Serpentine type 7TM GPCR chemoreceptor Srsx contains similarity to Interpro domain IPR019424 (7TM GPCR, serpentine receptor class sx (Srsx))" /note="Predicted" /db_xref="GOA:A8X8W2" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR019424" /db_xref="InterPro:IPR029063" /db_xref="UniProtKB/TrEMBL:A8X8W2" /protein_id="CAP29073.1" /translation="MVRVKFGKEQYDAIKKFEVQHHGDFWKLIMDKVGKSDGLSILDV SEEACLFALTLAENHPSNKLTIMASAEKPTFTFPANVEYHKGNIMRSAESISQIQLPN SHDTFLQRGPFDLIIFNEISHDISDIDKLFKTLKGLLTDAGTIVLFSRPKNPPLPVPD VCLMLWRKLAATKEELMASANAAQLNTTCFSAAVPISVDKVQWENILYSGCFPAIKNT PKCDERTIRDFCVAKSGKFEYIKTIRLLLHSDSSHRRLHCWRSINFSNGNRPIHCCKV LESVFRSILVTVSFVLLGWATTTIANSASYSVTDNLNTAHLIQTYAGITVNFAAASNV FVFYSINTEYREAINTLFGKHKKSGISHTETSTTQDFGTHNSKRSKSMSVLSMPRFFS SSKLISSSRRMTLV" CDS join(198403..198515,198560..198663,198712..198835, 198882..199001,199257..199433,199483..199657) /gene="Cbr-srsx-27" /locus_tag="CBG_09530" /standard_name="CBG09530" /product="Protein CBR-SRSX-27" /note="C. briggsae CBR-SRSX-27 protein; contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10320 (Serpentine type 7TM GPCR chemoreceptor Srsx) (2)contains similarity to Interpro domains IPR019424 (7TM GPCR, serpentine receptor class sx (Srsx)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8X8W1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="InterPro:IPR019424" /db_xref="UniProtKB/TrEMBL:A8X8W1" /protein_id="CAP29072.2" /translation="MFDYINPAILPLGFFFFFCSLIGVIGNAIMVFCTIRTKRFRSPC HLLICATCVADLLHVCGQFPFCVHLFGNLTSSQAQCFYILSIPIVGFTTGGPLILSMG IDRLIAVKFPTKYRYYQEEPRNYVIAQLSFPLLYSIVFLVYGFLVRDTDVKKSILVTV GFVLLGWVTTTTANTLSYSITDDLFTIQLIQMYAGITVNFAAASNVFVFYAINSEYRS VIKSMFGIRIKGGMIFEPSSTQTVTKVVPRSVSQPNVVFEKTPAAARRMTVV" CDS join(200073..200185,200232..200335,200793..200916, 200964..201083,201131..201267,201313..201514, 201743..201881,201926..201955) /gene="Cbr-srsx-28" /locus_tag="CBG_09531" /standard_name="CBG09531" /product="Protein CBR-SRSX-28" /note="C. briggsae CBR-SRSX-28 protein; contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10320 (Serpentine type 7TM GPCR chemoreceptor Srsx) contains similarity to Interpro domains IPR019424 (7TM GPCR, serpentine receptor class sx (Srsx)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8X8W0" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="InterPro:IPR019424" /db_xref="UniProtKB/TrEMBL:A8X8W0" /protein_id="CAP29071.2" /translation="MFDYIAKEILPLGFFFFFCSVIGIAGNLVMLMCSFRTKRFRSPC YILITVTCLADAIHISGQFPFCVHLFGNLTSTQAQCYYMLIVPLIGLTSGGPLILSMG IDRLIAVKYPTRYRYFQEEPKLYVFAQLLFPIAYAVIFLIYGFLVRDTDSKKQIICAN PLALNGTAFQMFTYSSGIIYVFVFIVYLSVYILLKSNKASARFKSVFRSLAVTVGLVM FGWVSTTTANTLSYSISDSAYTAQLIQMYAGITVNAAAASNVFVFYAINSEYREVIKA LFGCKSKANSPAFEASSTMVTVKSDANLQKRRSTILFVNQVYRPNH" CDS join(202283..202395,202801..203079,203125..203244, 203288..203424,203468..203669,203711..203858) /gene="Cbr-srsx-29" /locus_tag="CBG_09532" /standard_name="CBG09532" /product="Protein CBR-SRSX-29" /note="C. briggsae CBR-SRSX-29 protein; contains similarity to Pfam domain PF10320 Serpentine type 7TM GPCR chemoreceptor Srsx contains similarity to Interpro domain IPR019424 (7TM GPCR, serpentine receptor class sx (Srsx))" /note="Predicted" /db_xref="GOA:A8X8V9" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="InterPro:IPR019424" /db_xref="UniProtKB/TrEMBL:A8X8V9" /protein_id="CAP29070.2" /translation="MFSHIHPLILPLGFFFFINSFIGVVGNAIMLICFFKNKRLRSPC HILISLTCISDLLHLCAQFVYCVHLFGNSTFQILTVFQSNPNSFPVTSSQAQCFYMLI IPLYGVGASGPLILAMGIDRLIAVKLPTKYRLFQQEPKHYIFGQLVFPIVYTLVLLYY GFHYRIVDDKLQIACAVPLALMGTPFQFFTYSSALIYFLVVIVYGIVYYLLKSNQASA RFKSVFRSIMVTVGFVLFGWVTTTLTNTLSYEITDVAFTAQLMQMYAGITVNFAAASN VFIFYAINSEYREVIKALFGCKSKANTPAFEASSTMVTVSSTSQIQKRKLTMASIN" CDS join(205308..205420,205469..205572,205619..205742, 206155..206265,206335..206471,206514..206715, 206863..206986) /gene="Cbr-srsx-30" /locus_tag="CBG_09533" /standard_name="CBG09533" /product="Protein CBR-SRSX-30" /note="C. briggsae CBR-SRSX-30 protein; contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10328 (Serpentine type 7TM GPCR chemoreceptor Srx) , PF10320 (Serpentine type 7TM GPCR chemoreceptor Srsx) contains similarity to Interpro domains IPR019424 (7TM GPCR, serpentine receptor class sx (Srsx)), IPR019430 (7TM GPCR, serpentine receptor class x (Srx)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8X8V8" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="InterPro:IPR019424" /db_xref="UniProtKB/TrEMBL:A8X8V8" /protein_id="CAP29069.1" /translation="MFEDVHPWMIPLTFFYVIIIPIGVFSNIIMIICFFINPRLRSPF HILLTLTCLADGIHVCGQIVFVVQLLTNTYSYQSTCYFLNFFPVIGLTIAAPLLMEIG LDRLLAVSFPIKYRGFQFQKVLYTSIHLVFPILYTTSILYLGFMERNNELVKCAIPTA LAGVSFKVFTLSSHVIYMSIILAYLMTAVLLKFHDTSSRFKAVFKSIGVTVGIVLFGW AITTVSNTFGYFVTDDFEIFNLIQMYSGITVNIAISSNLFIFYTINPEYQLTVKMLLD GSFGKLPTFTDSASELQNLRKNTKSQES" CDS complement(join(208566..208645,208714..208828)) /gene="CBG09534" /locus_tag="CBG_09534" /standard_name="CBG09534" /product="Protein CBG09534" /note="Predicted" /db_xref="GOA:A8X8V7" /db_xref="UniProtKB/TrEMBL:A8X8V7" /protein_id="CAP29068.1" /translation="MSLLFVYIGFNFMVTVFGFTFFWKLFPENRMEAMSRQNADLKKV DSENNNTVESREEVENQKCK" CDS complement(join(211699..211892,211998..212763, 212809..213009,213064..213295,213344..213425, 213833..214022)) /gene="CBG09535" /locus_tag="CBG_09535" /standard_name="CBG09535" /product="Protein CBG09535" /note="contains similarity to Pfam domain PF00860 Permease family contains similarity to Interpro domain IPR006043 (Xanthine/uracil/vitamin C permease)" /note="Predicted" /db_xref="GOA:A8X8V6" /db_xref="InterPro:IPR006043" /db_xref="UniProtKB/TrEMBL:A8X8V6" /protein_id="CAP29067.1" /translation="MDYQEKKVEDKKQTVQRPFLRARDTPPFGIALLYGFQQVMVCVS ALLTVPIIMADSLCPGDKIAFLRQTLISSTFVSSGISTIIQTLFGMRLALLQGTAFAY VPSVQGFMSLPENFCNATEHDSVPQEIYFGKLALLQGCLIASSFIPMFIGCTGLVGML TKFIGPLTVSPLMLLLAFSQVDLMVTHISKHWVAIVQAVTLFATILYLAEVKIPIPGV KNRRFHWYKVNLFGQYPYLIAICTSWIFCIILTVFNLTPEGSAARVDKNISLQVIDES AWLGVPYPGKFGAPQFNLGLFLLFTLSAMTSVFESVGDYHAAARVSEERPPPSHAINR GILAEGLGSLISGLLGPGVGMTTHTENIGVIGVTRVASRWTMVMAGLFLIVLGLITKI GALLSTIPDPLVGGVLASSMAMVVGVAIANLQTVDMSLSRNMGVFGFSMMFGLIVPKY FNKFPVENAWSWLNQILNVLLQMPMFVGALCGCILDNTIGGATREQRGLRPRGEIYAG GIDECTYSFPPWAMNILNRIPGVQYIPCMPKEKKGTNRVGGEEIRL" CDS complement(join(216529..216678,216749..217043, 217090..217578,217591..218081,218241..218333, 218384..218437,218911..219051,219334..219609)) /gene="Cbr-egl-3" /locus_tag="CBG_09536" /standard_name="CBG09536" /product="Protein CBR-EGL-3" /note="C. briggsae CBR-EGL-3 protein; contains similarity to Pfam domains PF00082 (Subtilase family) , PF01483 (Proprotein convertase P-domain) contains similarity to Interpro domains IPR000209 (Peptidase S8/S53, subtilisin/kexin/sedolisin), IPR015500 (Peptidase S8, subtilisin-related), IPR022398 (Peptidase S8, subtilisin, His-active site), IPR002884 (Proprotein convertase, P), IPR023827 (Peptidase S8, subtilisin, Asp-active site), IPR023828 (Peptidase S8, subtilisin, Ser-active site)" /note="Predicted" /db_xref="GOA:A8X8V5" /db_xref="InterPro:IPR000209" /db_xref="InterPro:IPR002884" /db_xref="InterPro:IPR008979" /db_xref="InterPro:IPR015500" /db_xref="InterPro:IPR022398" /db_xref="InterPro:IPR023827" /db_xref="InterPro:IPR023828" /db_xref="InterPro:IPR032815" /db_xref="InterPro:IPR034182" /db_xref="InterPro:IPR036852" /db_xref="InterPro:IPR038466" /db_xref="UniProtKB/TrEMBL:A8X8V5" /protein_id="CAP29066.2" /translation="MKNTHVDLICVFLSIIIGIGEAVDVYTNHFHVHLKEGGGLEDAH RIAKRHGFINRGQVAGSDNEFHFVQPALVHARTRRSAGHHAKLHNDDEVLHVEQLKGY TRTKRGYRPLEQRLESQFDFTSVMSPSDPLYGYQWYLKNTGQAGGKARLDLNVERAWA MGFTGKNITTAIMDDGVDYMHPDIKNNFNAEASYDFSSNDPFPYPRYTDDWFNSHGTR CAGEIVAARDNGVCGVGVAYDGKVAGIRMLDQPYMTDLIEANSMGHEPNKIHIYSASW GPTDDGKTVDGPRNATMRAIVKGVNEGRNGLGSIFVWASGDGGEDDDCNCDGYAASMW TISINSAINNGENAHYDELNSVEPNIFRSCSSTLASTFSNGGRNPETGVATTDLYGRC TRSHSGTSAAAPEAAGVFALALEANPSLTWRDLQHLTVLTSSRNSLFDGRCRELPALG IKDNHRDSHGNCSHFEWQMNGVGLEYNHLFGFGVLDAAEMVMLAMAWKTAPPRYHCTA GLIDTPHEIPADGNLVLEIDTDGCVGTQYEVRYLEHVQAVVSFNSTRRGDTTLYLISP MGTRTMILSRRPKDDDSKDGFTNWPFMTTHTWGENPTGKWRLVARFQGPGEHTGTIKK FELMLHGTREAPYNFIEPIVGQTNKKLDTVQKAHKRSH" CDS join(224474..224536,224580..224714,224763..224864, 224913..225120,225169..225278,225329..225536, 225582..225712,225757..226053,226101..226301, 226356..226520,226568..226639,226686..226850, 226898..227289,227340..227391) /gene="Cbr-cul-5" /locus_tag="CBG_09538" /standard_name="CBG09538" /product="Protein CBR-CUL-5" /note="C. briggsae CBR-CUL-5 protein; contains similarity to Pfam domains PF00888 (Cullin family) , PF10557 (Cullin protein neddylation domain) contains similarity to Interpro domains IPR019559 (Cullin protein, neddylation domain), IPR001373 (Cullin, N-terminal), IPR016158 (Cullin homology)" /note="Predicted" /db_xref="GOA:A8X8V4" /db_xref="InterPro:IPR001373" /db_xref="InterPro:IPR016158" /db_xref="InterPro:IPR016159" /db_xref="InterPro:IPR019559" /db_xref="InterPro:IPR036317" /db_xref="InterPro:IPR036388" /db_xref="InterPro:IPR036390" /db_xref="UniProtKB/TrEMBL:A8X8V4" /protein_id="CAP29065.1" /translation="MLFDDEWVKAEPIVNALLHQKTVTPAEWQDLFFYVYKITSWVDE GPKKIRDILTRDINAYVLEASERIKTLQSGESLLNAYISEWNRFYRQSSILPLPFKKL DDSSKPRANVPEQGQDTIRAVMLEKWNDIIFTKICDQLLAEALRLIKEERDGNIINSE NVIGIRESFVTLNEKFPEPSLTIYQKSFEKQFVEQTSIYYKKICGKLLNELGVLEYMV YADKKLDEEQQRAQKYLEMGSPTASQHMESVVIALVENFEDIILAECAKLIAHRDVDR LQRLYRLIRRTRSGIETVLKCIDQHIRTEGLNDMRNNAESLATDPEKYVQQLLIMFDK FSALVREGFCDDARLLTARDKAFRAVVNDSSIFKTEMMNKKSRMLSVESKCAELLANY CDLLLRKTQLSKKLTSEEIDEKLGQVLLVLKYVENKDVFMRFHRAHLSRRLILEMSAD QEKEEMMVTKLRECGMPSDAVNKLSRMLQDIELNKDMNTLFKKVLTGTNNNKSIADSI NLKVLNGGAWGRGGSERIRFSLPRELEDFVPEMEAFYKKHHNGRKLNWMHHWSSGTMV FGTASGGRFDLEITTFQMAVLFCFNERAHEKISLETLRLATELPDAELNRTLLSLVSY PKMRSQILLCDVASQNITARDFTDSTKFSINHNFHLVKNGKSQQRGKVNLIGRLQLSL EANAEKEHESIVALREYRVQEGIVKILKTRKTITLAQMTMELVEILKPLFIPNRRIIK EQIDWLIENRFMERRPDDINTFVYLA" CDS join(227909..227959,228383..228466,228523..228711, 228778..228897) /gene="CBG09539" /locus_tag="CBG_09539" /standard_name="CBG09539" /product="Protein CBG09539" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8V3" /protein_id="CAP29064.2" /translation="MAAEAEWAQLPQISMDLNPIHQLCQPCILVADAVKDTNKSPIVK EAEKKTCNTILKNDLVCNGAVEVAGIYLNWTPSQKICENFQMCAPLLDNKKMRAPAKG ARRPDEAFENDEFPILQSRFARQTQNSVNLLEIPEVQNFEKCEYL" CDS complement(join(229151..229377,229426..229591, 229638..229941,229989..230137,230140..230173, 231451..231591,231638..231763,231816..231908, 231957..232239,232281..>232443)) /codon_start=1 /gene="CBG09540" /locus_tag="CBG_09540" /standard_name="CBG09540" /product="Protein CBG09540" /note="Predicted" /db_xref="GOA:A8X8V2" /db_xref="InterPro:IPR012677" /db_xref="UniProtKB/TrEMBL:A8X8V2" /protein_id="CAP29063.1" /translation="FSANKAYVNFTNKIDPADQFAFLETELANAEKCPNRVSENCTSL VHIIAHIAPGAFEKTPNITWFRDEYNEKFLNLTVRYANSIGWMIFGHHHTDTFHLIKD EKENVVQLALMSPAVTPWFSTLPGAGANNPTFRVYETDLYSKIEDIKTYYINLDELNK NASTPFVFEYSFKDAYGITGDITPNAVSDVLEKMKTNDSLFMTYINYNTAFWNPVMPV DEYKGAQLCSMEYADYPRYQTCLSKYEKSAHNDLKLPIFSLLAIFYSEFLLFQCFQKK TRFKFPEIPTSKNSCKSQPQLHKKKKKHAQRAVIINFSQGEKVTEEDVKIELAPFGPV HSVHMCTLDACQAFVTFRNSPEMSARKIVSKLFKLTTGVLFVGDFVWTICKPEEWKKC METPLDDLDGVENVSSAGQGITVDELTDIFTNFMQHNSSMSPVSVFSNSAQSFSSFSS LSLAKSYGSSSSSHAGSCDSSATITPFSFYPAQKSSGFINLPPPYHILPDTAFFRRTK IVPPPPIKPVSLTQNIMDCYISSIRKGDSELNRSRQTSIGSKMELECNWCNSL" CDS join(239735..239795,239868..240071,240119..240233, 240283..240376,240450..240512) /gene="CBG09541" /locus_tag="CBG_09541" /standard_name="CBG09541" /product="Protein CBG09541" /note="Predicted" /db_xref="InterPro:IPR029034" /db_xref="UniProtKB/TrEMBL:A8X8V1" /protein_id="CAP29062.1" /translation="MSPFFQLMVVFTIVAYCSSYVVVVDPFERIEEANAAASASQDPQ IPVVAPSDPILLRKRKSILVGLAEHTEEVCKTRIRQNHRPQYGHIANGSRVEIQQDEE SSLEATFVECLGENRPPCHGVDHDLFISECVTVYEHRPANVRVVKSGGAFFAATVRVP ILCECRLRRQFKDFDKRK" assembly_gap 243084..243446 /estimated_length=363 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(244729..244862,244914..245145) /gene="CBG09543" /locus_tag="CBG_09543" /standard_name="CBG09543" /product="Protein CBG09543" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8V0" /protein_id="CAP29061.1" /translation="MRVSILLLVFLSVALACDIIVHLKSDTDKKFSGQIVASNGKKSE RWSYLKKLQKNTFQQKADECGLKDWEITTWDETGKPVSTVKVTLDGIGRVTYKVGDDL KAVQKNRQGAICKGQCAPL" CDS complement(join(245366..245604,245654..245878, 245930..245986,246069..246135)) /gene="CBG09544" /locus_tag="CBG_09544" /standard_name="CBG09544" /product="Protein CBG09544" /note="contains similarity to Pfam domains PF00036 (EF hand) , PF10591 (Secreted protein acidic and rich in cysteine Ca binding region) , PF12763 (Cytoskeletal-regulatory complex EF hand) contains similarity to Interpro domains IPR002048 (Calcium-binding EF-hand), IPR018248 (EF-hand), IPR018247 (EF-Hand 1, calcium-binding site), IPR019577 (SPARC/Testican, calcium-binding domain)" /note="Predicted" /db_xref="GOA:A8X8U9" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR018247" /db_xref="UniProtKB/TrEMBL:A8X8U9" /protein_id="CAP29060.1" /translation="MGNSSSLMLRDEEIDEIMNETEFNRNQIVRLYSRFLSLDKKGQG YLSRDDFLNVPELAVNPLGDRIVDAFFTLASSNGDNEEQQLNFRQFVRILAHFQPISR VKKNALNSRKDKLLFAFKMYDLNKNDYITREEFKVILNSMVGANITSDQLDKIADRTI EEADADRDGKISFEEFCRAMEKTDIEEKMSIRFLN" CDS complement(join(246637..246763,246957..247123, 247176..247373,247490..247528)) /gene="CBG09545" /locus_tag="CBG_09545" /standard_name="CBG09545" /product="Protein CBG09545" /note="contains similarity to Pfam domain PF01176 Translation initiation factor 1A / IF-1 contains similarity to Interpro domains IPR006196 (RNA-binding domain, S1, IF1 type), IPR001253 (Translation initiation factor 1A (eIF-1A))" /note="Predicted" /db_xref="GOA:P0C659" /db_xref="InterPro:IPR001253" /db_xref="InterPro:IPR006196" /db_xref="InterPro:IPR012340" /db_xref="InterPro:IPR039294" /db_xref="UniProtKB/Swiss-Prot:P0C659" /protein_id="CAP29059.1" /translation="MSAATKKRYITNKVGSEFYELAEEDIIAQVRQSRGNNLHEVLDQ NGDSYVVSMPTKFRKAVWLRRDQFVVVRPIAEGDKVKGEIEYILDQDNVLYIRELGKW PSCFEEHALKMTREAKRGKANDKMIDDDMLPPSESEEEDDESEDEIEDTYDEDEETDD EEFDTYNPNRMQAPSK" assembly_gap 248229..249741 /estimated_length=1513 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(250560..250602,250620..250769, 250814..251079,251126..251338)) /gene="CBG27082" /locus_tag="CBG_27082" /standard_name="CBG27082" /product="Protein CBG27082" /note="contains similarity to Pfam domains PF08292 (RNA polymerase III subunit Rpc25) , PF03876 (SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397) contains similarity to Interpro domains IPR005576 (RNA polymerase Rpb7, N-terminal), IPR013238 (RNA polymerase III, subunit Rpc25)" /note="Predicted" /db_xref="GOA:B6IHF8" /db_xref="InterPro:IPR005576" /db_xref="InterPro:IPR012340" /db_xref="InterPro:IPR013238" /db_xref="InterPro:IPR036898" /db_xref="UniProtKB/TrEMBL:B6IHF8" /protein_id="CAR99338.1" /translation="MFILSLLRDTVAIKPHQLSSDQQMVIKKRLNERLANKVVPDLGL CICVYDISEIGDSYILPGEGDCRVRVTFRMIVFRPFVDEVIEAKVIGSSRQGLTLSVE FFEDIFVPAEKLPEPHVFEEDGQVWYWEYAQEDGEPPAKLYMDPGKIVRFRTTELIFK DLKPELSQEERKTEKSMEIKGTMASTGLGCVGWWTADDEDEEAVEDEQDESFLKNIRN GFHCY" CDS complement(join(251516..251621,251692..252224, 252273..252372,252420..252535,252584..252720, 252765..253185,253234..253494,253540..254427, 254475..255026)) /gene="Cbr-tag-315" /locus_tag="CBG_09547" /standard_name="CBG09547" /product="Protein CBR-TAG-315" /note="C. briggsae CBR-TAG-315 protein; contains similarity to Pfam domain PF07721 Tetratricopeptide repeat contains similarity to Interpro domains IPR011717 (Tetratricopeptide TPR-4), IPR019734 (Tetratricopeptide repeat)" /note="Predicted" /db_xref="GOA:A8X8U7" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR013026" /db_xref="InterPro:IPR019734" /db_xref="InterPro:IPR039340" /db_xref="UniProtKB/TrEMBL:A8X8U7" /protein_id="CAP29058.2" /translation="MNSQKPSTSNYRPEEDEEEEYGNILEQEGEDFPDVEEYDQDEGM DDDDDGTIAGVNITPHLTNLEREVNVEEEEVEPGPALEDEDLVNAINMFMRNEYDYDQ FMRVTGGQTLKEEMGTKRKRPSDSVEDDDADEVDLTEDDDEDGELMADVEDAAEHNGE GTSAITLDDRYDALPEEARYIMTQIMSGQTQKGVEVVAPPANLADALRSQFDESGATP LKQVKMEVHDGGASSSSAPAPPTEIHRDRGKSKRLDGLLGLANVYTAQGNIEGAMELL REVIRTDHKHAIAYQTIATVYEQEGDREKALQFGLLASHLNPKTPADDWVHWGDEASK LGRVDEAAVCYDRAIHLNNENWKFYEKRIEMLDRLNLRPLAMRTRLQAAQNINNDILQ VDFQWFRELIRKVAQYYITLNDEERSIQSLEAFVLRSREFGENAEAQHETLVGMYITR YKFEQAGKSILALCKGIKAVYMISREPACLITYTNGTYECLPFPPIGSIDYEIDEALF PVSMHCHLVYCLFSINEIEQSSELERKLLKRTYNIEVDEPSLLELPRLYKAKGNPKFA MKFMEELTKNPSYDYEESGAYWYLKGTLEMAQKREDAAMEAFNKTLILQPNHVDNRIN LSTLQQKAGLFDKALETLEDYDLENCSSLPDERLLARRADVLFESGDSDQFVRTTRMM LAPHFYQVYAPELMKKRRVPKAQSNTPALSNALRTCALNVIKHTNWERLVKRLGATVE ANGVSHNSLSGTDLHDYCLKLVECLNKMEKHQDALIVCCYAFLHPMLFKIEKTSTFQN LIYYCSVKARCWSLAFEFIRFYYSFTSANAAEKENTPHTDMLQKRLFNAMNYVFVNSQ NVCYHRFIMRALFKNKDNHALQAISGNNSLITGTYRHAMGEYLRVWVNNKKNPLICLL LSLTFTHMSCKKDLSSRHLIGIRGIAFMKKYSKVRTCQQEVYYNIARMFHQMSILPLA KHFYDKVLEASPPNIFVFDDDGNEVLVPAVKYDLRKMAAHNLALIYRTSGNHYAAREL YEKYLVV" CDS complement(join(255282..255455,255504..256157, 256206..256409,256455..256684,256734..256848)) /gene="Cbr-tag-143" /locus_tag="CBG_09548" /standard_name="CBG09548" /product="Protein CBR-TAG-143" /note="C. briggsae CBR-TAG-143 protein; contains similarity to Pfam domain PF04438 HIT zinc finger contains similarity to Interpro domain IPR007529 (Zinc finger, HIT-type)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X8U6" /db_xref="InterPro:IPR007529" /db_xref="UniProtKB/TrEMBL:A8X8U6" /protein_id="CAP29057.1" /translation="MTPQEKTPEVDIDDGHEDGEISDDEDDAPVELPSNQPNTLVNYP SSDDEKSPEDVISAYKQKIAEQKKEEAVPEVSVDPKLCKVCLKNEHKYRCPRCELRTC SLDCSKKHKADNDCDGVRQAFTKVDKLSQYDSQKSIDDQKFMHLVTEKAGLGADQTGN VGNEVNHLDGEEKPVDSNALRSSTKTPIERYLLNAARFRHIWLGFTDEQGNESRHEQH SDTVFWSIKLSFRKETNGGNVEVFEKTVNNIPETIRISTVLKQFFHPRQYGCIVSESD LDLNKLKPFIETGIDGVNVYMEVHGSQDRFYGVLPDRTILDMTRNRVVADYPKFVITL NNEFTESMQLLSPEELERIQAQYGGIGNERFGGGGGGGNGRGRGGRGFHRGGGGRGGG GQNHHNNFRKRPSNGGGYDGGFKRGRGGNFNNGGNRRGGYHNRNNHQNDSFDPFEPFS GPNHLPID" CDS complement(join(256970..257163,258114..258257, 261350..261497,261545..261744,261788..261852, 261898..262181,262227..262382)) /gene="CBG09549" /locus_tag="CBG_09549" /standard_name="CBG09549" /product="Protein CBG09549" /note="Predicted" /db_xref="GOA:A8X8U4" /db_xref="UniProtKB/TrEMBL:A8X8U4" /protein_id="CAP29055.1" /translation="MLEYESDVVTENSSMSYYLELQDIQYFIDIENCVIIFYIVFSII LSIVLKWKCKVFESSNHFTLIFYFCTAVVILGSLLYTVTTFTLLYFKSIRHIFLIMFL FIQMALKFCAPFISPVITTMTFLYSFSFVFQRTETLKTAFQSKTGSRTIWIISSVYGL WVHPFNSHNKSVLYYDTNHYLYQLISINLFDCFIILCTTILVGIKLLNVYKHPKHLSN YEIASLIHVTVILFFQHILFIFNLVMLNSSNVERLESLKNVLMEKRGTWQIFCIFGPF SYPYSILSKVYGDNEDNDVEAEEYTDIRFIRERDHTHSPSAKMNCEREKGDWGRSKSA CVSFYSFLLIILFIKHSNSSNSSRGGDLLSLQRLDVRSFIASSSPITHLPQTLSRDVA DIQI" assembly_gap 258711..259517 /estimated_length=807 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(260080..260387,260507..260571,260616..260665, 260712..260849,260968..261168) /gene="CBG09550" /locus_tag="CBG_09550" /standard_name="CBG09550" /product="Protein CBG09550" /note="Predicted" /db_xref="GOA:A8X8U5" /db_xref="UniProtKB/TrEMBL:A8X8U5" /protein_id="CAP29056.2" /translation="MVISRKTFLQTEELNSFPCVPSLIWLHFFGLFLPITNLIIVGFL SLIFTTLSSYTFVYIPTILSLVYHNSMADWMVPLILIYSITLSYDLPETLKFPHIHVP RDIVIWLAMLIYGFLFNSFNPWDIVTIRRIHHENGHISTSFNFVDAFVVALSMCFIGL HGYRMTFRIAFRDNRFHMTLLFVMIKLCFLLTSACFIPAIPNHTNSSIESANPSSAPQ GHVFSLDNLKLYESVVQSAVPLHYLAWKHIFFKHI" CDS complement(262745..262948) /gene="CBG09551" /locus_tag="CBG_09551" /standard_name="CBG09551" /product="Protein CBG09551" /note="Predicted" /db_xref="GOA:A8X8U3" /db_xref="InterPro:IPR040123" /db_xref="UniProtKB/TrEMBL:A8X8U3" /protein_id="CAP29054.1" /translation="MCSVVQEASAQYYGYASSYYPSYYGGYGNAYGAYGAYGAYGGYG LGSAYAGYYGKREAGFGPSQNNQ" CDS join(263467..263480,263534..263759) /gene="CBG09552" /locus_tag="CBG_09552" /standard_name="CBG09552" /product="Protein CBG09552" /note="Predicted" /db_xref="GOA:A8X8U2" /db_xref="InterPro:IPR040123" /db_xref="UniProtKB/TrEMBL:A8X8U2" /protein_id="CAP29053.1" /translation="MNSKFLLCVLSVILCSVVQEASAQYYGYASSYYPSYYGGYGNAY GAYGAYGAYGGYGLGSAYAGYYGKREAGFGPSQNN" CDS complement(join(265002..265092,265145..265407, 265449..265985,266030..266127,266179..266329, 266371..266523)) /gene="Cbr-daf-36" /locus_tag="CBG_09553" /standard_name="CBG09553" /product="Protein CBR-DAF-36" /note="C. briggsae CBR-DAF-36 protein; contains similarity to Pfam domain PF00355 Rieske [2Fe-2S] domain contains similarity to Interpro domain IPR017941 (Rieske [2Fe-2S] iron-sulphur domain)" /note="Predicted" /db_xref="GOA:A8X8U1" /db_xref="InterPro:IPR017941" /db_xref="InterPro:IPR036922" /db_xref="UniProtKB/TrEMBL:A8X8U1" /protein_id="CAP29052.2" /translation="MFLENLWECVIEHPIAVIVTVAILYLTHITLKPLNRIRRLGDVG LFFGKPELTGFYRERQLERLKLLRRTGDLPPVFPNGWYCVCESEKLQKNQIMEITILG QFLSLIRSESGTVYITDSYCPHIGANFNIGGRVVRDNCIQCPFHGWIFSAETGKCVEV PYDEGRIPEQAKVTTWPCIERNNNIYLWYHCDGVEPEWQIPEITEITEGLWKLGGRTE HELMCHIQEVPENGADIAHLNYLHKSAPEITNGSDIIKTDLSDPQPAVQHVWDGKWEV KSEEDKHCGVMHLNQFMTIWGYKVPLTSSKLVAEQVGHGPGIVHMLFDFGIWGKGVVF QTVTPEEPLLQRVRFRIFSNIPWFFVKFFMTVEAMQFERDVFIWSNKKYIKSPLLVKN DGPIQKHRRWFSQFYTENSPRMMKDGSLSNQAKSTFDW" CDS complement(join(267066..267331,267382..267547)) /gene="Cbr-ttr-19" /locus_tag="CBG_09554" /standard_name="CBG09554" /product="Protein CBR-TTR-19" /note="C. briggsae CBR-TTR-19 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)" /note="Predicted" /db_xref="GOA:A8X8U0" /db_xref="InterPro:IPR001534" /db_xref="InterPro:IPR038479" /db_xref="UniProtKB/TrEMBL:A8X8U0" /protein_id="CAP29051.1" /translation="MQLSFLHFVCFCAVLSTSNALFGIGRKQSVAVTGRLTCNGVPAK DVKIKLYEKEKIKDVKMDETTTDVNGYFKVSGYKTEITNIDPQINIYHRCNYKKLCYK KVPIKIPDNFITSGIVPKKTFDIGEINLANRFKGTTIDCIN" CDS complement(join(268279..268507,268557..268570)) /gene="CBG09555" /locus_tag="CBG_09555" /standard_name="CBG09555" /product="Protein CBG09555" /note="Predicted" /db_xref="GOA:A8X8T9" /db_xref="InterPro:IPR040123" /db_xref="UniProtKB/TrEMBL:A8X8T9" /protein_id="CAP29050.1" /translation="MNSKFLLCVLAVIICSVVQEASAQYYGYASSYYPSYYGGYGNAY GAYGAYGAYGGYGLGSAYAGYYGKREAGFGPSQNNQ" CDS join(269674..269899,269992..270158) /gene="CBG09556" /locus_tag="CBG_09556" /standard_name="CBG09556" /product="Protein CBG09556" /note="Predicted" /db_xref="GOA:A8X8T8" /db_xref="UniProtKB/TrEMBL:A8X8T8" /protein_id="CAP29049.2" /translation="MIALTKSLALCTIFIFLSISILLFISVFYICKYHYERIQLAQCA ILMKPEEVNKRRTAGECEKGDIETDIDIELPYYTNVNVPRILLTSEELPPDYHELESA RASPLPSYDDVMYCDQLNRSFQNLLSAR" CDS join(270485..270498,270549..270777) /gene="CBG09557" /locus_tag="CBG_09557" /standard_name="CBG09557" /product="Protein CBG09557" /note="Predicted" /db_xref="GOA:A8X8T7" /db_xref="InterPro:IPR040123" /db_xref="UniProtKB/TrEMBL:A8X8T7" /protein_id="CAP29048.1" /translation="MNSKFLICVLAVIMCTVVQEASAQYYGYASSYYPSYYGGYGNAY GAYGAYGAYGGYGLGSAYAGYYGKREAGFGPSQSNQ" CDS complement(271478..271633) /gene="CBG27081" /locus_tag="CBG_27081" /standard_name="CBG27081" /product="Protein CBG27081" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHF7" /protein_id="CAR99337.1" /translation="MNFLELYELEIYENFMTLPGPQTILEKLRTPIIGTESLMNFTTR PRILNRF" CDS join(272034..272047,272098..272326) /gene="CBG09559" /locus_tag="CBG_09559" /standard_name="CBG09559" /product="Protein CBG09559" /note="Predicted" /db_xref="GOA:A8X8T6" /db_xref="InterPro:IPR040123" /db_xref="UniProtKB/TrEMBL:A8X8T6" /protein_id="CAP29047.1" /translation="MNSKFLLCVLAVIMCSVVQEASAQYYGYASSYYPSYYGGYGNAY GAYGAYGAYGGYGLGSAYAGYYGKREAGFGPSQNNQ" CDS complement(join(272438..272860,272905..273046, 273095..273308,273358..273445,273661..273846)) /gene="Cbr-str-182" /locus_tag="CBG_09560" /standard_name="CBG09560" /product="Protein CBR-STR-182" /note="C. briggsae CBR-STR-182 protein; contains similarity to Pfam domains PF10319 (Serpentine type 7TM GPCR chemoreceptor Srj) , PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) , PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd) , PF10326 (Serpentine type 7TM GPCR chemoreceptor Str) contains similarity to Interpro domains IPR019423 (7TM GPCR, serpentine receptor class j (Srj)), IPR019422 (7TM GPCR, serpentine receptor class h (Srh)), IPR019421 (7TM GPCR, serpentine receptor class d (Srd)), IPR019428 (7TM GPCR, serpentine receptor class r (Str))" /note="Predicted" /db_xref="GOA:A8X8T5" /db_xref="InterPro:IPR019428" /db_xref="UniProtKB/TrEMBL:A8X8T5" /protein_id="CAP29046.1" /translation="MLELLKDIAQCVALCISIALNSILTYLIMTKSNSKMGSYKYIMM YMSLSALCYSVLGLIVRPDLLSYSSCFSVYVKNSTAIFKPVVMIYLMSFICAFYFFFA SLIAVHFVYRYNALKYGPNWTYFKGKFLFCWFLISPILYVNWTLNCLLVFQPNENNTE FLRKRMKNDFGVNVDDITYIIAEFYPMDRNGIRTPSFWTFFSGINFLVMTVASLIVIL VFGFKCYYEMTRVVMPGRNYSITQKLLQTQLFRALVFQTLIPSVIMYLPLFVLFIFPM FNIDLGFAHYVSISISLYPALDALPNLLFIRDYRDGLSNFLKKPHETTLKSFEPYSIR RGSRLTSATRSTVHLS" CDS complement(join(275368..275880,275925..276121, 276475..276620,276665..276852)) /gene="CBG09561" /locus_tag="CBG_09561" /standard_name="CBG09561" /product="Protein CBG09561" /note="contains similarity to Pfam domains PF10327 (Serpentine type 7TM GPCR chemoreceptor Sri) , PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) , PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd) , PF10326 (Serpentine type 7TM GPCR chemoreceptor Str) contains similarity to Interpro domains IPR019429 (7TM GPCR, serpentine chemoreceptor class i (Sri)), IPR002052 (DNA methylase, N-6 adenine-specific, conserved site), IPR019422 (7TM GPCR, serpentine receptor class h (Srh)), IPR019421 (7TM GPCR, serpentine receptor class d (Srd)), IPR019428 (7TM GPCR, serpentine receptor class r (Str))" /note="Predicted" /db_xref="GOA:A8X8T4" /db_xref="InterPro:IPR019422" /db_xref="UniProtKB/TrEMBL:A8X8T4" /protein_id="CAP29045.2" /translation="MYSPALCHGDELFFENKNSFQITSHIISALFLPINCWGIYCITR KTPKSMRPVKLYLLNLHIWCTLFDLFCGSLITPFFFFPSLSGSPIGLLTVVGVPTLIQ ICLTFCVFGGLCSAIIYVFENRQYVLCENTNIFRLENSKARVFYYGFVFAYCCLSIYP FSWNIPEQNNAKLRILDMIPCPNSEFFSNNTYVFKGPEDTAAFGYLGLCFTIFLASQI SFFGGNCFYMLYAWDNITLSAHSKRLQRKFFITICIQIFIPMWVVVLPLSYFLGSLFT GYYSQSLNNLTSVFFSCHGFISTICLLFMNPPYREATFHMLSPFCSPSFKNRLVESNR PGRTSFAVTTHSK" CDS complement(join(277195..277426,277475..278067, 278115..278579,278629..279038,279393..279399)) /gene="CBG09562" /locus_tag="CBG_09562" /standard_name="CBG09562" /product="Protein CBG09562" /note="contains similarity to Pfam domains PF00013 (KH domain) (4), PF09005 (Domain of unknown function (DUF1897)) contains similarity to Interpro domains IPR018111 (K Homology, type 1, subgroup), IPR004087 (K Homology), IPR015096 (Domain of unknown function DUF1897)" /note="Predicted" /db_xref="GOA:A8X8T3" /db_xref="InterPro:IPR004087" /db_xref="InterPro:IPR004088" /db_xref="InterPro:IPR015096" /db_xref="InterPro:IPR036612" /db_xref="UniProtKB/TrEMBL:A8X8T3" /protein_id="CAP29044.2" /translation="MTNGLPSKRLAEDPDLSLSNPFMGDNENVNEKYPIPESAVGIVI GRGGSEIQGIQAKAGCRVQMSSDSDNSGVRQVTLEGTRANVEAAKVLINEVVARSQTP RPQYGFPRAQNTIDIAIPPNRCGLIIGKAGETIRQLQEKSGCKMVLVQDSQTVGDQAK PLRITGDPQKIEIAKQLVAEILNSGPDGSGGGGHQVQHIGSGGASARGEVVVPRSSVG IIIGKQGDTIKRLAMETGTKIQFKPDEDPNAPERCAIIMGTRDQIYRATERITELVRK SAQQQGGSMTGSAGAESSTFFMSVPAAKCGLVIGKGGETIKQINSESGAHCELSRDAT GNVEEKVFVIKGGKRQIEHAKHLIRIKVGDIAPNTPFRDDSAMSIQPQFAAPAQGGFG AQQWNPAAATQIPGATQNPYQVAGGWQQNNVYAQQQAAAVAAAAAPYAAAGIVQAQPQ VAAYQQPQVVQQQQPQAAAGTPVVDPVTGEQDYSAQWMEYYKSIGALDKAEAVEAQMK KKKAEAAARAAAGSAALVQQMPMGMPMQQVAGQPRAAQAYPAYSAAGTVAYQPQQYGQ FQ" CDS join(280263..280379,280426..281196) /gene="Cbr-col-148" /locus_tag="CBG_09563" /standard_name="CBG09563" /product="Protein CBR-COL-148" /note="C. briggsae CBR-COL-148 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain) , PF01391 (Collagen triple helix repeat (20 copies)) (2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /note="Predicted" /db_xref="GOA:A8X8T2" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/TrEMBL:A8X8T2" /protein_id="CAP29043.1" /translation="MLEENIVVGVSICVSGLAIISCLFVIPCQYNMIQTVRSEVTTEV SAFREETDLAWIELMDVQISVMPLSLPRQNPFNSIFRQKRQSYKSLPSWCQCEPTKPI CPPGPPGPPGQPGQRGQPGNPGIQGPDCNIVYSPISCPPVSEDCVKCPQGLMGSAGAM GPAGPSGPPGRPGYPGPRGNPGFPGTPGENGDNGKPGQPGQNGQPGRNGADGQRGYGA SGAPGLPGKQGPQGQPGIDGYSGQDGWKGGQGPAGQDGFPGTFGQPGTPGNQGNPGIP GPDASYCPCPRRSSRFISK" CDS complement(join(281283..281444,281496..281609)) /gene="CBG09564" /locus_tag="CBG_09564" /standard_name="CBG09564" /product="Protein CBG09564" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8T1" /protein_id="CAP29042.1" /translation="MSTTTEDVDDLKTAIDINDCKKEKEEPMQRAAQIRIKQRYNCPE QELIQMRAPFLGFSVFVRFQSRARIHTINIVKGDEIDKMLNSPVPYS" CDS join(286369..286472,287569..287641,287644..287676, 287739..287924,287969..288124,288169..288366, 288516..288707,289040..289246,289413..289541, 289586..289948,289997..290173) /gene="Cbr-akt-1" /locus_tag="CBG_09565" /standard_name="CBG09565" /product="Protein CBR-AKT-1" /note="C. briggsae CBR-AKT-1 protein; contains similarity to Pfam domains PF00169 (PH domain) , PF07714 (Protein tyrosine kinase) (2), PF00069 (Protein kinase domain) (2), PF00433 (Protein kinase C terminal domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR017892 (Protein kinase, C-terminal), IPR008271 (Serine/threonine-protein kinase, active site), IPR001849 (Pleckstrin homology domain), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR000961 (AGC-kinase, C-terminal), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X8T0" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000961" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR011993" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017892" /db_xref="InterPro:IPR039026" /db_xref="UniProtKB/TrEMBL:A8X8T0" /protein_id="CAP29041.3" /translation="MSMTSLTTKSRKPEDVVIEGWLHKRGEHVKNWRPRYFIIFKDGA LLGFRSKPKDSVPYPPLNDFMIKEAATMTFEKPRPNMFMVRCLQWTTVIERTFYADSP ESRAKWIKAIEDISKRYKDSQDAPVEHMDTNPPTIDEDGEYAGAAHAIMGQPSAGPNH SDIDFRASMISIADTSDAAKRDKITMEDFDFLKVLGKGTFGKVILCKEKREQKLYAIK ILKKEVIIAREEVAHTMTENRVLQRCKHPFLTELKYSFQEQWHLCFVMEFANGGELFT HLRKCGTFPESRARFYGAEIVMAIGYLHLNNVVYRDMKELRYSFQTDDRLCFVMEFAI GGDLYYHLNKEVQMNKEGFSEPRARFYGAEIVLALGYLHANNIVYRDLKLENLLLDKD GHIKIADFGLCKEEIKFGDKTSTFCGTPEYLAPEVLEDNDYGRCVDWWGVGVVMYEMM CGRLPFYSKDHNKLFELIMVGDLRFPSKLSQEAKLLLQGLLVKDPAKRTGGGSEDAME ICRQDFFKSVDWEAMYRKEIEPPYKPNVNSETDTSYFDNEFTSQPVQLTPPHKSGHLP TVDEQEEMQSNFTQFSFHNIVGSINRIYEASEEDERMAE" CDS complement(join(290670..290966,291020..291668, 291735..292652,292698..292768)) /gene="Cbr-rop-1" /locus_tag="CBG_09566" /standard_name="CBG09566" /product="Protein CBR-ROP-1" /note="C. briggsae CBR-ROP-1 protein; contains similarity to Pfam domain PF05731 TROVE domain contains similarity to Interpro domain IPR008858 (TROVE)" /note="Predicted" /db_xref="GOA:A8X8S9" /db_xref="InterPro:IPR008858" /db_xref="InterPro:IPR036465" /db_xref="InterPro:IPR037214" /db_xref="InterPro:IPR040322" /db_xref="UniProtKB/TrEMBL:A8X8S9" /protein_id="CAP29040.1" /translation="MAEELNEDQVAANFDESKLRDLSNVAARLHRMQLAEDDMEIIVV DGELQRLPRQMEQVKEGQVMNNAGGFVFPVSDETQVRRFLILGSDKGTYHQNAEKITL DNAQRIVEIIQKGKGHKVLHELALINAENRNPKMNSMLFTLAICARVSTHDTTKKNEC PILHTYSEYIRALHAAALRLLPDVCRTPTHLFEFVDYCQTIAESTKAGGAKSSTGWGR SLRNAIIKWYKEKTAEKLAMLLTKYPQREGWSHRDLFRLAHPNLMDDGTHHTDREDRL EREQLFRFAVKGDLVKRKRKANDEEKAKIEESWDKRALKVPYTEQQLVKEEKSRALDL VEAYLSLKQEQSEEVIVEAIKKHGLVREHLPTSSLNSKLVWETLFDVPMPMTAMIRNL GKMTLVGALDDNRVKSIVSRLTDQEELRRARIHPLTLLTARSVYARGRGDKGSLTWEP NQKICDALEAGFYKAFVNSPPTGKRYCLALDVSGSMCSPVSSSPLSCREAATGMSLIN LHNEAEVKCVAFCDKLTELPFTKDWKIGQVNDYVNNLSFGSTDCGLPMTWATENNLKF DVFIIYTDNDTWAGEIHPFEAIKKYREASGIHDAKVIVMAMQAYNYSIADPSDAGMLD ITGFDSAVPQIVHEFVTGNI" CDS join(295358..295369,295442..295539,295591..295728, 295796..296108,296159..296466,296510..296628, 296949..297100,297147..297248) /gene="Cbr-nhr-232" /locus_tag="CBG_09567" /standard_name="CBG09567" /product="Protein CBR-NHR-232" /note="C. briggsae CBR-NHR-232 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /note="Predicted" /db_xref="GOA:A8X8S8" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR013088" /db_xref="InterPro:IPR035500" /db_xref="UniProtKB/TrEMBL:A8X8S8" /protein_id="CAP29039.2" /translation="MTWRPTSSTLTCKICCEPAHGVHFGVASCRACAAFFRRTTVLGK KYSCRLKNEQCTTNNEDRFNCRYCRYQKCLSCGMTPESNCSLYKEPSPKMKAEYLDHP TDPSPPLEMEQPTCARQTKDVTYEVQTDEKGEPIVKLDITGLLNNITSVLDDFIPSDD VRDLNTLTRMNHALIEYRQIHHSNVIKFVQTISMREILMTGNDQIKSITKFLMHSVPF RSLRNEDQMQMLKSIWVQWKRLERYVSTAQIFGKRMYEDQIVTLVPGLAAYLNKIHVD CAAFIYKKAEGMKFFMENFNTRMMEEVGKPLVELELTSVETAFMLAQMSWQVAGKELQ GDVLKASESEQETLANELHIYYIEELRLPNYASRLIKIMNIINAAQKIHFERQSFMDL VRIFDFFRVHVSDPEIYKAYF" CDS complement(join(297544..297636,297868..298113, 298164..298292,298605..298763)) /gene="Cbr-sri-18" /locus_tag="CBG_09568" /standard_name="CBG09568" /product="Protein CBR-SRI-18" /note="C. briggsae CBR-SRI-18 protein; contains similarity to Pfam domains PF10327 (Serpentine type 7TM GPCR chemoreceptor Sri) (2), PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) contains similarity to Interpro domains IPR019429 (7TM GPCR, serpentine chemoreceptor class i (Sri)), IPR019422 (7TM GPCR, serpentine receptor class h (Srh))" /note="Predicted" /db_xref="GOA:A8X8S7" /db_xref="InterPro:IPR019429" /db_xref="UniProtKB/TrEMBL:A8X8S7" /protein_id="CAP29038.2" /translation="MLSSSRETVEQSIRIFMGTSGIVSFFINCFGIYLICYHHGMMDD YRYYLLYFQKNMLPAPMLKFSQIFSNVLPLVGTIAYAFSEPNDSQKRKIIDEKYSSIA AWLSEVKGIAIYDIDVSLNPSFFFLTFGIMSGTFILSTSYAILYTQLYVMLNSIKSKI SHKTFKKHSVAIVSTVMQNLVFVIFFVSPIFLLAIVIYTGRDASGSLA" CDS complement(join(299742..299807,299861..300005, 300055..300307,300358..300448,300515..300667)) /gene="Cbr-ric-4" /locus_tag="CBG_09569" /standard_name="CBG09569" /product="Protein CBR-RIC-4" /note="C. briggsae CBR-RIC-4 protein; contains similarity to Pfam domain PF00835 SNAP-25 family contains similarity to Interpro domains IPR000928 (SNAP-25), IPR000727 (Target SNARE coiled-coil domain)" /note="Predicted" /db_xref="GOA:A8X8S6" /db_xref="InterPro:IPR000727" /db_xref="InterPro:IPR000928" /db_xref="UniProtKB/TrEMBL:A8X8S6" /protein_id="CAP29037.1" /translation="MSARRGAPGGQRHPRPYAVEPTVDINGLVLPADMSDELKGLNVG IDEKTIESLESTRRMLALCEESKEAGIKTLVMLDDQGEQLERCEGALDTINQDMKEAE DHLKGMEKCCGLCVLPWNKTDDFEKNSEYAKAWKKDDDGGVISDQPRITVGDPTMGPQ GGYITKITNDAREDEMDENIQQVSTMVGNLRNMAIDMSTEVSNQNRQLDRIHDKAQSN EVRVESANKRAKNLITK" CDS join(313541..314002,314160..314573) /gene="Cbr-lys-1" /locus_tag="CBG_09572" /standard_name="CBG09572" /product="Protein CBR-LYS-1" /note="C. briggsae CBR-LYS-1 protein ;" /note="Predicted" /db_xref="GOA:A8X8S5" /db_xref="InterPro:IPR017853" /db_xref="UniProtKB/TrEMBL:A8X8S5" /protein_id="CAP29036.1" /translation="MLKLVALTLLATLASARPQDVDSNRIVALPQDDLDVSAIVFEKI EVKPAPAVVSVDASYAYGVDLAVPATLAQMNCLKTSRYAAVFLRAFAPTGSGVFDTTS VNNIRNAYSAGLGIEVYMTPQPLSSLQGYQQLDLLYNGLTNNGITIRSVWIQVTSPAN WQKSATTNVNFINSIVSRAKQYGLTVGIYTNQYDWSQITGNWATLSSDVLLWYWHVLG GGVTGETPATFDDFRAFGSFKKASVKQFAQVESVCSLTVNRDVYAVGIPAAASSSKKA ITENSKIFVGGVVGF" CDS complement(join(315367..315771,315886..316311)) /gene="Cbr-lys-2" /locus_tag="CBG_09573" /standard_name="CBG09573" /product="Protein CBR-LYS-2" /note="C. briggsae CBR-LYS-2 protein ;" /note="Predicted" /db_xref="GOA:A8X8S4" /db_xref="InterPro:IPR017853" /db_xref="UniProtKB/TrEMBL:A8X8S4" /protein_id="CAP29035.1" /translation="MIKSLIALTFLFALSSARPQDTEPIKIGFETIDAKPAPEIVNND ASYGNAVDFSVPTSPALMTCLKKAKYQVVFVRGFAPAGSGSFDMNVVGSIRNAYNAGL GIEVYMTPQPSSSYQGYQQLDILYNGLTSNGITVRSVWIQVTSPSDWPRSTTSNINFI NSIVSRAKQLGLTVGIYTSQYDWSQITGQWNTLSSDVLLWYWNVLGSGVNGETKATFD DFRAFGSFKKASAKQYAQVETVCQMVVNRDVYAVGIPAVASEKANESDKIVVGGFVGN " CDS complement(join(316746..317090,317144..317349, 317393..317744)) /gene="Cbr-lys-3" /locus_tag="CBG_09574" /standard_name="CBG09574" /product="Protein CBR-LYS-3" /note="C. briggsae CBR-LYS-3 protein ;" /note="Predicted" /db_xref="GOA:A8X8S3" /db_xref="InterPro:IPR017853" /db_xref="UniProtKB/TrEMBL:A8X8S3" /protein_id="CAP29034.1" /translation="MKFLLFLALLHFVSSLPTVAPKDHFEPWNFFEKVPVEQVIDPDY NIPAVQDAPEIPMEERDSATHAYSVDIAFHTTVSDMDCLRDHGYKSVFVRALNPSGNT YFDREALNTINNAYDAGLGSEIYITPNINSTRSGGDQISLVYQNLHDNGINVRSIWIQ VTSPSNWEAPMPVRIEFIHDMIQRAQVLGLAVGIYTSFYDWLEITGGFNNFSSQVFLW YWHVLGIGADGETIPTLEDFRPFGPWKQGTIKQFGQVEKLCGMIVNRNVYGILNQQKS KIIHIPSGNSHIEKEMIRVGGIGL" CDS complement(join(319308..319313,319407..319451)) /gene="CBG27080" /locus_tag="CBG_27080" /standard_name="CBG27080" /product="Protein CBG27080" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHF6" /protein_id="CAR99336.1" /translation="METGEKKNRREDSDEE" CDS join(319609..319732,319754..319829,320083..320223, 320270..320431,322836..323039,323088..323193, 323239..323573,323621..323753,323798..324007) /gene="CBG09575" /locus_tag="CBG_09575" /standard_name="CBG09575" /product="Protein CBG09575" /note="contains similarity to Pfam domains PF01705 (CX module) , PF01762 (Galactosyltransferase) contains similarity to Interpro domains IPR002659 (Glycosyl transferase, family 31), IPR002619 (Domain of unknown function CX)" /note="Predicted" /db_xref="GOA:A8X8S2" /db_xref="InterPro:IPR002619" /db_xref="InterPro:IPR002659" /db_xref="UniProtKB/TrEMBL:A8X8S2" /protein_id="CAP29033.1" /translation="MKLFIFLTLICSDVIARGGGGRGGGGGGRGGGGARAGVGRGGIG GSGVTGRSVFAGTSRSGLGGWKTGSSSPASSYGSSSFRSAVFASSYSQSYFTHSSLTN ALIISSLARPITYDNRQYYWSSSHAKEKLPPDQYPALCEYQIGPDDGQLQNVSFQDSA PKMSIIFRVNKNEFSDATVFLNIDRIRTFSTESSLFQVIETPSHPNWSQNRTYSAQFK DQRHSYQFVTIPKKQCSNNTKLQITILSTAGNFEIRQAIRDTWANPNNSKHVENNDVR ISFIISAAQNEFLNSSIQKEIEKYDDLIVTDLYESYELLILKVHAILTYKQNFCESAD FQLKIDDDMAVYMEGLYDSLSEKKQSSVDAISGIIWRNSPPVREKKHRWYVPMTLYSQ KHFPPYIDGPIYLIGKNVIPKMLDATKNYSQWIIEDVFWTGILAKALKIRQINWANHL LRYVIELVPSRLKCLNGKPLIYAVHNMKGPQMIVDGYNKLTGVKCE" CDS complement(join(324613..325389,325471..325587)) /gene="Cbr-col-149" /locus_tag="CBG_09576" /standard_name="CBG09576" /product="Protein CBR-COL-149" /note="C. briggsae CBR-COL-149 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain) , PF01391 (Collagen triple helix repeat (20 copies)) contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /note="Predicted" /db_xref="GOA:A8X8S1" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/TrEMBL:A8X8S1" /protein_id="CAP29032.1" /translation="MFEEKLLVGIASLASTIAILACVVVIPGLYSTINEMHDEVIDGV KVFRVETDAAWVEMLDVQVMVAPPSKPKENPFNSVFRQKRRSTYASLPSWCQCEPAKP RCPPGPPGPPGHPGQRGIPGIPGRRGQDNHNTISPPACPARDPECVKCPAGPPGPSGT CGPVGRPGPDGRPGQPGRRGNDGRPGQPGPQGNAGQPGRDGRPGQPGHPGKDGRRGHG APGAPGRAGQPGRAGAPGHPGKPGERGPHGYCGPAGRPGQQGNRGSDGHPGAPGNPGL QGSDAAYCVCPRRSVMFLNRH" CDS complement(join(326572..327348,327393..327509)) /gene="Cbr-col-150" /locus_tag="CBG_09577" /standard_name="CBG09577" /product="Protein CBR-COL-150" /note="C. briggsae CBR-COL-150 protein; contains similarity to Pfam domain PF01484 Nematode cuticle collagen N-terminal domain contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal)" /note="Predicted" /db_xref="GOA:A8X8S0" /db_xref="InterPro:IPR002486" /db_xref="UniProtKB/TrEMBL:A8X8S0" /protein_id="CAP29031.1" /translation="MFEEKVLVGVASLASTIAVITCLVVIPSLYSTINEVHEEVLDGV KVFRVETDAAWVEMLDVQVMVSPPSKPRENPFNSVFRQKRQTFSELPSWCQCEPAKPR CPPGPPGPPGRPGQRGTPGSPGPRGQDNHQVHAPIHCPQRQPGCVKCPRGPAGPSGPS GQPGRPGPDGRPGQPGRKGNNGRPGQPGPQGNAGQPGRDGGLGQPGHPGKDGRKGRGL PGPAGRPGQPGKQGGPGQQGRNGERGQDGQPGPGGRPGQPGNRGSDGHSGTSGGRGLP GPDAAYCACPPRSSVFVKAKH" CDS join(331433..331787,331834..332095,332143..332237, 332286..332594,332641..332783) /gene="CBG09578" /locus_tag="CBG_09578" /standard_name="CBG09578" /product="Protein CBG09578" /note="contains similarity to Pfam domain PF03409 Transmembrane glycoprotein contains similarity to Interpro domain IPR005071 (Protein of unknown function DUF274)" /note="Predicted" /db_xref="InterPro:IPR005071" /db_xref="UniProtKB/TrEMBL:A8X8R9" /protein_id="CAP29030.1" /translation="MIFQVFLALFAVCNAQKLIDLKSFKGQTDTQIDATGPYSIYVSA SSDDDALLNKMTIKSSDNKVQTLLSLKNAKKQQNTGPLQPFAITNSAVLSSSLTNDQM SKLTGTLYITTAQQLQNNKGFYVFNVETSEKVTITGDIYPDDVTLVFLNTNYKDQPFM SSTISAWKQAEGSSVYIYEGIPKDTDEKANSQIFSNPVLLQDKSMKFIPSVEIFSLNL GAFYIKSHKGIQFVIEPTFNDIDNSVTSSKTTTGFYMKPIANPDRKVTIKTGHDNDYQ GMSGVNVLGSVPANANFGVTGPGNWATTPSETIHSWSAATIADTLSLETTNCVAGEVF VQYYVIQGAENVPSTTMLPGRQTTARIQSTTKSTALIQLFTSVLIPIVGARTL" CDS complement(join(333443..333526,333575..333720, 333768..333991,334040..334362,334407..334496, 334543..334735,334780..334919,334964..335086, 335130..335312,335361..335444,335489..335583, 336571..336682,336731..336882,338458..338599, 338645..338771,338832..339019,339067..339231, 339275..339642,339694..339792,339836..339920, 339966..340106,340151..340321,340436..340552)) /gene="CBG09579" /locus_tag="CBG_09579" /standard_name="CBG09579" /product="Protein CBG09579" /note="contains similarity to Pfam domain PF12348 CLASP N terminal contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR024395 (CLASP N-terminal domain)" /note="Predicted" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR021133" /db_xref="InterPro:IPR024395" /db_xref="InterPro:IPR034085" /db_xref="UniProtKB/TrEMBL:A8X8R8" /protein_id="CAP29029.1" /translation="MTSLFDALSRTNDRLPSPNILPEDFLELLKSNDFDTKLTTLIRA ATVAKREEDWFQKFKKKGELFKCIDKIVCDDRWELQHQCIKFLVEAMPTFGSATEYCM CYVMPNLIPKLVSNKVTVRKITHQAISTFLRLKPEALQSVLKMVANFMPNCTSKPILI TELHAILIPEVVKGNWASLVENLATTANIQGCEEQAGILMKKFHYFIGNESWQKIVSN LIPEKREVLERITENVKVEQTDSKTGNGVLRTSAKPQSGGERRLRYGIIPSLVCALIA EDSDANQKIAGLEKMKQVVDQITAEEIARLVPHLHSYLLMLSNVLEDLNFKVVVLALD IVRATAHHLKGHMEAHIQQFVNIVAKHFGNQKSVIKQIIMMTFMELFQNINPKTVGGC LRVYLENKNSRVREEVINIYTASLMTISPSKFNLPPLVNIIVPMFHDPKKRVRLAAFE QLSVLAYLLNGKTEIIMKAVRDFEQDQKTRGLAEAVTARIRRQVLPRIRYDGLIEYST PPMMDSFDLAESEMSLPSNADLAWIVTTSNPNSSTSSWEAPKRPPISPPEKSSFSAPK KEKEVNNNHIDKKGNLKKMRSDTNLSEDHQTDEMENDPPRNFDDRPAKASGAYSFQDF DSPISPANMGKKSVSHHSLPITSHPPLKHAVSQPQKRVNNNGTFLRSGQGQRTKSVSK PHREPSAISKTYSSLDSSNMSVNIALKKMAHDEWSEKVDGLNMISTLSETQPKQVSDN LKEVIIAILNECKNLRSSVSRVAIVTIGTVAQNLNSKIDSEMEKICVVLLNKAGDVSN AFIRDDATDSLNKLVKAATAGKALQGIIVAGSKSKNNTIRASCANFVHDIITIQGSSV ILNNQAALCSVLPVLIQFAKDQSPQVRTSGKQSLCFLSKDPNFDRLMKKNANESDIKT VKDVLANVEKRGGVDSLESTANLSGSLSRIGSTRRVQKKLPDSLQLDLDEIRTDLLAS GWERRLAGLQRFEEMCGHAAKAVASDTRLIEAFISRLGDTNSKVASYAMETYISTMGS MAKLYSTEANLKAVLNQVAFALTAHLSSKSEEHKHLARTCIQQTIRTIEPVSLLPAMT AATKKSNIKQRPYITTQYCELCKLAYKNKPKQVEVMALPLLWDSIKNGPPDVDNKKAS QLLAKTLAKLVGEKQLLDLATAELDPNRKKQLDALIR" CDS complement(join(341566..341640,341692..341804, 341833..341931,342068..342671,342716..342804, 342853..343372,343552..343837,343885..344262, 344295..344398,344440..344559,344605..344717, 344765..344896,344944..345185,345215..345363, 345432..345507,345548..345657,345699..345764, 345816..345854)) /gene="Cbr-gcy-6" /locus_tag="CBG_09580" /standard_name="CBG09580" /product="Protein CBR-GCY-6" /note="C. briggsae CBR-GCY-6 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF07701 (Heme NO binding associated) , PF00211 (Adenylate and Guanylate cyclase catalytic domain) , PF01094 (Receptor family ligand binding region) contains similarity to Interpro domains IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR000719 (Protein kinase, catalytic domain), IPR011645 (Haem NO binding associated), IPR018297 (Adenylyl cyclase class-3/4/guanylyl cyclase, conserved site), IPR001054 (Adenylyl cyclase class-3/4/guanylyl cyclase), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR001828 (Extracellular ligand-binding receptor), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8X8R7" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001054" /db_xref="InterPro:IPR001828" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR011645" /db_xref="InterPro:IPR018297" /db_xref="InterPro:IPR028082" /db_xref="InterPro:IPR029787" /db_xref="UniProtKB/TrEMBL:A8X8R7" /protein_id="CAP29028.2" /translation="MHPTTAVLLFLATVDCQPPGNIFHLGFLHCDVLQKNVEGSSPYI SYRTSASAASIAIDRIKRENRLTGYDFKFTILYDQCDENLAAGNAIKLFRDYNYCFIS AAIPVFTLATYYNTPIVTWGMTSSATLDDASRYPTAGIISIGSRRHRYFSLAVTFREV MLEYGWDQFVYAYSLEGDDEKCETMRDDFQNMIAYYGDIVLSYTIQIMDHSEAGLLAV LKDVSTRGRIIVPCFHEGNTRGLHRRWMLVAARNGFVTDEYVYIIPSLRSKGYAIQQD DGSYRYPWVDSTGPQPSDHEAIPGFQRSIFIVDMQGQGKIGSNYSVFEDEVIRRMKQP PYNCTEACSAQEYQHAATYAGQLHDAVYLYGLAMERVLITAPTQYRNGTQFGFLENIF SGHHNLGVGGPIVIDDSGGRSPTLFVLTLDANNTSSIIMTVDVDQQSAEVTKLYSNEA TAVWYHRKGIRPPDEPVCGYTGSKCPANVFYENMGWFIAAIIVILLTILGAILAFVYL FYAKRQEVERQNALWQIPYKSMMTVAKKGKGEHSMRSISSVPSTISSTRSSTLSEVGE TRNYLFFQIQNEVEIEKVAARKYTIRTLFDNKICANMRQMRLIDHSNLNKFIGMSLDA PQLLSVWRFCSRGSLADVIRKASLQMDGFFIYSLMKDIVNGLTWIHDSSHEYHGMLTS KNCLLNDRWQLKITDFGLRNFRTHDQYTKMGELLEILYFSEVFKFSDRLWTAPELLRN DDIMGSREGDVYSLGIISAELITRSSVFDLENRKEDAEEIVYMLKKGGLQSPRPHLDH DESIEINPGLLHLVRDCWTERPSERPDIKQVASQLRSMNTNRNDNLMDHVFNVLESYA STLEDEVAERMKELVEEKKKSDVLLYRMLPKQVADKLKLGQTVEPETFDVVTLFFSDV VSFTTLAGKCTPLQVVNLLNGLYTIFDGIIEQHDVYKVETIGDGYFVASGVPRRNGNE HTRNIASMSLCFVKSLADFNIPHLPGEKINIRVGFHCGSVVAGVVGLTMPRYCLFGDA VNTASRMESNSKPSCSNFSAGHVHISDEANRMLMTLGGFTTETRGEVIIKGKGVMTTY WLLKMDESAAPKNLKK" CDS join(346279..346431,346476..346565,346617..346811) /gene="Cbr-trx-2" /locus_tag="CBG_09581" /standard_name="CBG09581" /product="Protein CBR-TRX-2" /note="C. briggsae CBR-TRX-2 protein; contains similarity to Pfam domain PF00085 Thioredoxin contains similarity to Interpro domains IPR005746 (Thioredoxin), IPR013766 (Thioredoxin domain), IPR017937 (Thioredoxin, conserved site)" /note="Predicted" /db_xref="GOA:A8X8R6" /db_xref="InterPro:IPR005746" /db_xref="InterPro:IPR013766" /db_xref="InterPro:IPR017937" /db_xref="InterPro:IPR036249" /db_xref="UniProtKB/TrEMBL:A8X8R6" /protein_id="CAP29027.1" /translation="MQKLFRLGSTLARSAVSIKPTLMTSRVTQFRPFSQGSFVFEIES SDDFNEKVIQSPVPVIVDFHADWCGPCQALGPRLEEKVNGQSGSVLLAKINVDYAGEL AMDYGISAVPTVFAFKNGEKVSGFQGVLDDEQLDEFIENILAD" CDS complement(join(346963..347500,347549..347647, 347695..348015,348058..348395,348441..348851)) /gene="CBG09582" /locus_tag="CBG_09582" /standard_name="CBG09582" /product="Protein CBG09582" /note="contains similarity to Pfam domain PF11470 GLUT4 regulating protein TUG contains similarity to Interpro domain IPR021569 (GLUT4 regulating protein TUG)" /note="Predicted" /db_xref="InterPro:IPR021569" /db_xref="InterPro:IPR029071" /db_xref="UniProtKB/TrEMBL:A8X8R5" /protein_id="CAP29026.1" /translation="MSCLTIICPNAKRVQVKTTPMMLIRQVLEEACLKSGFEVNRHRL QTQSRKPIDPSLPFRLSGIPNNATLEMIQKEASSENAMIDLAIQSGSGARHQKKVNVK VMLLDVLKDFTAEFGEDLATTVDGSVPCVVYMNKRYTGAELAVNSLSSLGVSTGKCLI RYMRVKLNAEELSAMETRLKEEMDRKKAMDANFSKLKAENEERNRLEQLRQEAFDKDK DERKKREEEQLKAIIPETNAPENVEIDTSGPQNRDVLREVPQQDPNSWSFDGPAFSRP AQQNTMRLEELNRLLERTNNSLESSSHESRMDAMVNALADGGRITLAEVRTRADIAME QEQEVAEVFGDSCDRQAVIFKKGSKVQAEEPMETEEFFEVGLDDVRNMQKDLRKAVRD QTQASFVSKDYLVKKNRQLKIDAYKHTVVRVNVGEHILQACFNTNEQSYKLDVFLKSV FKRSDWKLMFTNMKVVTSEVKNFVDLELAPKSTLIATFGGQTVNAADVVQNVSEVRQE EADRIASQWLSINKTFIPFNSTVNDDRKQKRTTTDSTFSAPSSGPPAKSAMPKWLQTG RK" CDS complement(join(349106..349499,349545..349995, 350039..350149,350193..350479,350528..350936, 350983..351091)) /gene="CBG27079" /locus_tag="CBG_27079" /standard_name="CBG27079" /product="Protein CBG27079" /note="contains similarity to Pfam domain PF01142 tRNA pseudouridine synthase D (TruD) contains similarity to Interpro domains IPR020119 (Pseudouridine synthase TruD, conserved site), IPR001656 (Pseudouridine synthase, TruD), IPR017091 (Pseudouridine synthase TruD, eukaryotic)" /note="Predicted" /db_xref="GOA:B6IHF5" /db_xref="InterPro:IPR001656" /db_xref="InterPro:IPR011760" /db_xref="InterPro:IPR020103" /db_xref="InterPro:IPR020119" /db_xref="InterPro:IPR042214" /db_xref="UniProtKB/TrEMBL:B6IHF5" /protein_id="CAR99335.1" /translation="METEFGLTEYASGHEITPIPCLLKEMYTDFIVQEILDDGKVLSI PSPDVILESTGSKDVQIEESVEKPSCISDETLAAIEERFSTKGTPVLVKVDTLTKEER KSIHHFVRERFSGKLITETKDDGIYVSHGHTQSTRKRKNWDENIPKECHFTMCKENKE TSYACQLIAKFLNIGPNNIKTHGIKDKRGVTAQRVSVTKVLESKILDLNSRLRGIKVF GCEYKNEPVKMGGHWGNRFSIVLRDLPNDSEPTLHERLETFQNTGFLNYFGTQRFGSR CSTTAEIGLAIAKRDWEGAVRMILSNAMPDHLENGQVGWAVKCFTETGDARKAFSKLK GAQAFATVEGQILKCLTRGGTWQKCITEAIPIQSRSLYVHAYQSLLWNKVASRRVKEY GTRVHESDVGADGKPLGEHSTHYDIHIALPGENSAFENSYGAKWISELLKEDGLTPAS FTSLRDKFSLGESSRPLFVEAKELKWKFIHYEQPRAFLQDGLQTRAIPESEQKGPLLA LQIQFSLSSGSYATVALREVTGYDMGKKSMRDASLKSQKGAEQNEEQEDKDDNELTEA NPEVVEVVEVTEVAAVEEAN" CDS complement(351242..351739) /gene="Cbr-gna-1" /locus_tag="CBG_09583" /standard_name="CBG09583" /product="Protein CBR-GNA-1" /note="C. briggsae CBR-GNA-1 protein; contains similarity to Pfam domain PF00583 Acetyltransferase (GNAT) family contains similarity to Interpro domain IPR000182 (GCN5-related N-acetyltransferase (GNAT) domain)" /note="Predicted" /db_xref="GOA:A8X8R4" /db_xref="InterPro:IPR000182" /db_xref="InterPro:IPR016181" /db_xref="InterPro:IPR039143" /db_xref="UniProtKB/TrEMBL:A8X8R4" /protein_id="CAP29025.1" /translation="MSSVFDASVLAPHVPPGMPENLIIRPLAKDDFSKGYLDLLGQLT SVGNIDQEAFEKRFEAMRVSVPNYHIVVIENTETRKVVASASLVVEMKFIHDAGSRGR VEDVVVDSAMRRQKLGAVLLKTLVSLGKSLGVYKMSLECVPELLPFYSQFGFKDDCNF MTQRF" CDS join(352340..352539,352585..352733,352783..352974, 353019..353284,353738..353860) /gene="CBG09584" /locus_tag="CBG_09584" /standard_name="CBG09584" /product="Protein CBG09584" /note="Predicted" /db_xref="GOA:A8X8R3" /db_xref="InterPro:IPR001104" /db_xref="InterPro:IPR039698" /db_xref="UniProtKB/Swiss-Prot:A8X8R3" /protein_id="CAP29024.1" /translation="MLENLWEVRQALPIYLLTATIGLAVSCCFTLICPHVCRLIPALT TYGKAADQLEENSLVARISVPKKWFKHFYALGLLTLLLCLHCIHSLIHNPDFLPTIPI KFLTILTRSYSIPPIAPSTAVLALLLITFHVARRLYETLFVSVYSDSRMNVFHYIVGI VHYIILPISIMCETQGVITKKEIFHVSVDDITLTQWAGAVLFWVCNWKQHQIAEQIAN TRKGPRGLIRNYAYGICFGRWFNLVSCPHFLFEICIYLSLLLVIPTAYVYRFVVLFVC VNQTFAALITHSWYHKTFPKYPKTRKALIPYVL" CDS complement(join(354196..354295,354411..354503, 354550..354671,354720..355276,355343..355687, 355733..355902,356137..356227,356277..356536, 356580..356865,356913..357293,357764..357875, 358173..358310)) /gene="Cbr-crm-1" /locus_tag="CBG_09585" /standard_name="CBG09585" /product="Protein CBR-CRM-1" /note="C. briggsae CBR-CRM-1 protein; contains similarity to Pfam domains PF02822 (Antistasin family) (3), PF00093 (von Willebrand factor type C domain) (3)contains similarity to Interpro domains IPR004094 (Proteinase inhibitor I15, antistasin-like), IPR001007 (von Willebrand factor, type C)" /note="Predicted" /db_xref="GOA:A8X8R2" /db_xref="InterPro:IPR001007" /db_xref="InterPro:IPR004094" /db_xref="InterPro:IPR011061" /db_xref="UniProtKB/TrEMBL:A8X8R2" /protein_id="CAP29023.2" /translation="MHDECLKANCPLYFHKGCPPDSQLITESSTPGNCCQKPGTCHCD QKKCVPSVPTCTKEERLVMVEKGSDTPGKCCAVYECQKKEKKCDNVICPPIIQDEEPC PSDSFRPPDMIPKEGCCPVRQACKCRGSICRPAQCPNKKVISVIKKGTGYPGRCCDEW DCIVGESKATCKHNNIERQPMETWHANDCETCQCLRGVSVCSKMACPKINQECTWIGI PTGECCPVCLGCQTENQTKLERGDTWQKDDCTSCTCSELGAHMCEKYMCKTDCENPRK VEGQCCPVCDEPTIIRPPATCPSLELCSLRCANGLRRDNIGCYVCECLPDEVPTNPRC RELNDENCEKQCAHGYLKDEDGCTVCKCSKCPPLHQCHKHCLYGFETNSAGCSLCKCR ASSKLDKKPSTTKSMKPGAGSLQQTEYHSEKCISFSNDGHQIVRDGGEWWSDGCRHCF CENKQEFCSLISCPSKPSDCADENWVQKEEECCPSCTDQKKKPKSSNSLAAQKHEHTV CQSPGTGRLFTDGETWQLAPCVSCTCRVGHVLCRTTECPPIACPNPEYENEDDCCPVC PEQKVVNTKNDKGDTIVCTDDSGTAHIVDDCTSCVCSAEGSADCYKEACDDSLECRGN PLVIKGKCCPVCSDALSTSAVCSYQSSVYSIGEQWQDGRCSNCSCVTGGQTVCRQMVC PHCDDPVPIEGHCCPLCKGTESSSAAFFSKLTISDAKWGPYGYGNGSGAFPTSLGPKI DDGSGSSATSLIVVSLMSLSVVALIIVFMLLYKWSRKSNKLHKFNEVGQIASGGTSTV RLSASKTIGSMPRLVDWKDTRDESGEEFLKATANHIRHDSHNSDDQSDSLLSTMSDTS TAPSTISSSGHVPISDTQPLTPKHRYPV" CDS complement(362967..363161) /gene="CBG27078" /locus_tag="CBG_27078" /standard_name="CBG27078" /product="Protein CBG27078" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHF4" /protein_id="CAR99334.1" /translation="MNWSRCTFVLFSLFIVLNAKTQKTPLCGSCDKDSCPDVSGCNLI KVDQCDCCKVIMNYVQKNDV" CDS complement(join(367811..367984,368271..368410, 368612..368900,368949..369110,369165..369422, 369471..369581,369643..369690)) /gene="Cbr-arx-2" /locus_tag="CBG_09586" /standard_name="CBG09586" /product="Protein CBR-ARX-2" /note="C. briggsae CBR-ARX-2 protein; contains similarity to Pfam domain PF00022 Actin contains similarity to Interpro domains IPR020902 (Actin/actin-like conserved site), IPR004001 (Actin, conserved site), IPR004000 (Actin-like)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:Q61JZ2" /db_xref="InterPro:IPR004000" /db_xref="InterPro:IPR004001" /db_xref="InterPro:IPR020902" /db_xref="InterPro:IPR027306" /db_xref="UniProtKB/Swiss-Prot:Q61JZ2" /protein_id="CAP29022.3" /translation="MDSQGRKVIVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRST QRVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMGHVWDHTFGPEKLDIDP KECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAAVLTLYAQGLLTGVVVDSGDG VTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKL CYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGL SELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDA FQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGGIARCMAKLGIK A" CDS join(370499..370702,370748..370878,370929..371047, 371097..371446,371492..371593) /gene="CBG09587" /locus_tag="CBG_09587" /standard_name="CBG09587" /product="Protein CBG09587" /note="contains similarity to Pfam domain PF00248 Aldo/keto reductase family contains similarity to Interpro domains IPR001395 (Aldo/keto reductase), IPR020471 (Aldo/keto reductase subgroup), IPR018170 (Aldo/keto reductase, conserved site), IPR023210 (NADP-dependent oxidoreductase domain)" /note="Predicted" /db_xref="GOA:A8X8R0" /db_xref="InterPro:IPR018170" /db_xref="InterPro:IPR020471" /db_xref="InterPro:IPR023210" /db_xref="InterPro:IPR036812" /db_xref="UniProtKB/TrEMBL:A8X8R0" /protein_id="CAP29021.1" /translation="MSRFTRVVGGAFKFTDGFEMPKVGLGISRIPTQEALDVSVEAAL KSGYRLFDTANLYKNEHYLGNSLKKYLPAFDLTREDVFITTKVRTLNENTVEETEKQL ANSLSSLQTDYIDLLLVHYPRDRDTGHDDDYEINKNRRKIVWQYLEKAQELGKVRSIG VSNYEVYHLVEMFEYSKVRPVLNQYEYQPYLTRPTLKKFCDLNNIVVQSYSSLCWGNQ EILQEEALLQLCQKYNQTPQAILYAFAYCSNTSMIPKSATPSRIHDNLHNTMQIHLNE EDLKSLRSLDKGKSFLPIGQTWRCL" CDS join(374214..374417,374464..374594,374645..374763, 374813..375162,375212..375313) /gene="CBG09588" /locus_tag="CBG_09588" /standard_name="CBG09588" /product="Protein CBG09588" /note="contains similarity to Pfam domain PF00248 Aldo/keto reductase family contains similarity to Interpro domains IPR001395 (Aldo/keto reductase), IPR020471 (Aldo/keto reductase subgroup), IPR018170 (Aldo/keto reductase, conserved site), IPR023210 (NADP-dependent oxidoreductase domain)" /note="Predicted" /db_xref="GOA:A8X8Q9" /db_xref="InterPro:IPR018170" /db_xref="InterPro:IPR020471" /db_xref="InterPro:IPR023210" /db_xref="InterPro:IPR036812" /db_xref="UniProtKB/TrEMBL:A8X8Q9" /protein_id="CAP29020.1" /translation="MSRFTQVVGGAFKFSDGYEMPKVGLGISRIPTQEALDVSVEAAL KSGYRLFDTANLYKNEHCLGNSLKKYLPVFGLTREDVFITTKVRTVNENTVEETEKQL ANSLSSLQTDYIDLLLVHYPRDRDTGHDDDYEINKNRRKIVWQYLEKAQELGKVRSIG VSNYEVYHLVEMFEYSKVRPVLNQYEYQPYLTRPTLKKFCDLNNIVVQSYSSLCWGNQ EILQEEALLQLCQKYNQTPQAILYAFAYCSNTSMIPKSATPSRIHDNLHNTIQVQLTE DDLKSLRALDKGKSFPQKGKTWRCL" CDS complement(join(376708..376794,376842..376928, 378509..378574)) /gene="CBG09589" /locus_tag="CBG_09589" /standard_name="CBG09589" /product="Protein CBG09589" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8Q8" /protein_id="CAP29019.2" /translation="MRIYMSNGNRIIKIQNSRERQKNQYWEEDAGLSAPFQLEDQRFF VPILSDKRSIDQKIRSLKERTANGQFKGILFGRKK" CDS complement(join(379785..379925,379975..380249, 380421..380753,380938..381172,381219..381326, 381409..381563,381614..381728,381937..382035)) /gene="CBG09590" /locus_tag="CBG_09590" /standard_name="CBG09590" /product="Protein CBG09590" /note="contains similarity to Pfam domains PF01798 (Putative snoRNA binding domain) , PF08060 (NOSIC (NUC001) domain) , PF08156 (NOP5NT (NUC127) domain) contains similarity to Interpro domains IPR012974 (NOP5, N-terminal), IPR002687 (Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain), IPR012976 (NOSIC)" /note="Predicted" /db_xref="GOA:A8X8Q7" /db_xref="InterPro:IPR002687" /db_xref="InterPro:IPR012974" /db_xref="InterPro:IPR012976" /db_xref="InterPro:IPR029012" /db_xref="InterPro:IPR036070" /db_xref="InterPro:IPR042239" /db_xref="UniProtKB/TrEMBL:A8X8Q7" /protein_id="CAP29018.1" /translation="MSEVPHFVLYEHAAGYALMKIKEFEDAGLIVQEVDAAHADGYKF SQIVELKAFDPFKNTEAALENCNSISEGLAHPDLTNFLQKELPKKKKHVVLGINDSKL AGSLTEAFPDLKLVFGGVITEILRGTRVHFERLAKDLPHHSLSKAQLSLGHSYSRSKV KFDVHRVDNMVIQSIALLDQLDKDINLFGMRIREWYSYHYPELFRLAPDQYKYSRLAV AILDRNKMAENENLENEILEILDNDAEKTAQIIEAARTSMGMDISDLDLENIKRFAAR VASLMEYRQQLHEYIKDRMDHCAPSLSALIGEQVGARLISHAGSLTNLAKYPASTVQI LGAEKALFRALKTRSNTPKYGLLFHSSFIGKAGTKNKGRVSRYLANKCSIAARVDCFS ETPVSTYGEFLRQQVEDRLEYFTSGTVPKKNIDVMKEAEEAAVEVKEKVIKKKKKAAK KAKRLAEEMATGAAEAEVDEEAPKPKKKKKSKAGDE" CDS complement(join(382563..382712,382761..384105, 384152..384456,384503..384610)) /gene="CBG09591" /locus_tag="CBG_09591" /standard_name="CBG09591" /product="Protein CBG09591" /note="contains similarity to Pfam domains PF11708 (Pre-mRNA splicing Prp18-interacting factor) , PF00098 (Zinc knuckle) contains similarity to Interpro domains IPR021715 (Pre-mRNA splicing Prp18-interacting factor), IPR001878 (Zinc finger, CCHC-type)" /note="Predicted" /db_xref="GOA:A8X8Q6" /db_xref="InterPro:IPR001878" /db_xref="InterPro:IPR021715" /db_xref="InterPro:IPR036875" /db_xref="InterPro:IPR039974" /db_xref="UniProtKB/TrEMBL:A8X8Q6" /protein_id="CAP29017.3" /translation="MASYKQNLPPSAVVRQHVSLADKKSKAEVQRDRQLEEDRKAGTA PAMVDVQTGRDINPHIPMFISQNPWYVPSEGPTLKHQRPHEERQKNMTQIHEWYQKGT TGKSATKFRKGACENCGAMGHQKRDCFDRPRKSNAKETNANIAEDDYVQPKLSLGFDA KRDRWNGYDPATHKQVIEDYEHLEEARKVVKEHEMKEGESEVPTTEEGAPKDEDMYAE DADMAGVSVDMDSRTRITVRNLRIREDTAKYLYNLAENSPYYDPKSRSMRENPFAGVA GKELEAARFSGDNFVRYSGEVTAANEAQVFAWQATRGGVYAHSIAEPTKLEALKKEYE KGKTTLKNETQKELLDKYGGGEHMERPADELLLAQTESYIEYNRKGKVIKGKERAAIS SRFKEDIYPQNHTSVFGSFWREGNWGYKCCHQFVRNSYCTGKQGVDAESSAAKGTTTS NEQVFKAPKLVEPTEVKEEEMVKEESEEEEESVEPTKSPTPSDDEEKMKQYEEERRLE KERREREQRRRDKNREKRGRKKAKLGKRKRRHRDSDEDSNSSGSSDSESDSDKERKET RRALKKANRERAEGMKAAKEGDRGRKYNTDYSNTAPTEKEMEAYRMTSVHSADPMAAY MNSKFEKKHCK" assembly_gap 385555..389432 /estimated_length=3878 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(391971..392126,392173..392324, 393498..393664,393708..393989,394033..394343)) /gene="Cbr-ceeh-2" /locus_tag="CBG_09592" /standard_name="CBG09592" /product="Protein CBR-CEEH-2" /note="C. briggsae CBR-CEEH-2 protein; contains similarity to Pfam domains PF12695 (Alpha/beta hydrolase family) , PF12697 (Alpha/beta hydrolase family) , PF00561 (alpha/beta hydrolase fold) contains similarity to Interpro domains IPR000073 (Alpha/beta hydrolase fold-1), IPR000639 (Epoxide hydrolase-like)" /note="Predicted" /db_xref="GOA:A8X8Q5" /db_xref="InterPro:IPR000073" /db_xref="InterPro:IPR000639" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8X8Q5" /protein_id="CAP29016.1" /translation="MGIAANLFRVVYATWRQYIYTAGALLTLTWKWLTKDKDYFTEYT YPEPECLKNWNHKFVQLKDIRMHYVEEGPEDGDVLLMVHGFPEFWYSWRFQLEHFKHT HRCIAIDMRGYNSTDRPSGISNYNISYLVDDIRQFIEILGLKRVTLAAHDWGAMICWR VAMMHQELIERLIICNVPHPIAFFDVYKVSKEQRDKSWYVYFFQSQHIPEIAMRSNKM KMLEAMFRGKQAGIRNSQNFTDEDMLAWKHVFSQPGATTGPLNYYRDLFNAPSISRKL QIVQPKVLILWGDEDNFLDKKGAEFSVQYCRNCRVEFIRGASHWVQQDQPELVNAYME QFMKEDIYGIVDNSKEFKSNL" CDS join(395448..395551,395602..395743,395787..396002, 396047..396180,396225..396320,396365..396448, 396822..397035,397084..397209,397251..397384, 397429..397654,397700..397774) /gene="Cbr-ttll-15" /locus_tag="CBG_09593" /standard_name="CBG09593" /product="Protein CBR-TTLL-15" /note="C. briggsae CBR-TTLL-15 protein; contains similarity to Pfam domain PF03133 Tubulin-tyrosine ligase family contains similarity to Interpro domain IPR004344 (Tubulin-tyrosine ligase)" /note="Predicted" /db_xref="GOA:A8X8Q4" /db_xref="InterPro:IPR004344" /db_xref="InterPro:IPR013815" /db_xref="UniProtKB/TrEMBL:A8X8Q4" /protein_id="CAP29015.2" /translation="MGSLDSKLWIGVLIIAILTVDFHFEGKIGSYFDFRFRTSYFSKP STVSLTLAEKDIEEHSPAPLSVSEESKPIAIVTGSYETAHTGHMKHIREMFEHTGYQI VTKNELTLDTKWDVMWHHEYSFTQEPFKTLIKNASPNQIVNHVPGSGYYTSKVQLATS TLSTGVPKAFQLPEEKEKFVEYAEKNPEILWVQKDNTHRNIKIRSIGDMDLGKNNSFI QKFVDNPLLIDNRKFDIGVYTVVTSLLPLRVYIYDGDVLIRFCPEDYHPFGVENVDKY VVGDDYTPVWEIKSLEKYFNVQKMSFRSTVDSYLGVQGKDSSKIWQQIRNIIGKVFRS QQTKMLKNLQSLKLNPKYFELSRFDFVVDDELNVFLMEANMSPNLSSGHFKQNQILYE KVLMNIFSLTGISKQFTKDAYNQFKSRASDQNPLVNSRDINLPLKFCVEDKCESCNEA PECQLCGHCMSIETRKTLEDTYLEHINRRQMRRIELDYENHQPLTKEDHLLSLWLRTK CQMDYSWC" CDS join(398658..398714,398766..398873,398920..399106, 399152..399330,399383..399435,399491..399923, 399990..400338,400566..401116,401166..401294) /gene="Cbr-cash-1" /locus_tag="CBG_09594" /standard_name="CBG09594" /product="Protein CBR-CASH-1" /note="C. briggsae CBR-CASH-1 protein; contains similarity to Pfam domains PF08232 (Striatin family) , PF00400 (WD domain, G-beta repeat) (5)contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR013258 (Striatin, N-terminal), IPR001969 (Peptidase aspartic, active site), IPR001680 (WD40 repeat), IPR020472 (G-protein beta WD-40 repeat)" /note="Predicted" /db_xref="GOA:A8X8Q3" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR013258" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR020472" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:A8X8Q3" /protein_id="CAP29014.1" /translation="MEDSGQLPNAQNEKTEEETNRSQYTMSGILHFIQHEWTKNELDR TRWEAERAEMQARIAFLQGERKGQENLKQDLVRRIKMLEFCLKQERAKNYRLTHNGEE PPSFDESANENSAPSDNSHLSADLDAYINDAGEAGGSFRQGRLLLKRYLEEIGYSEHI MDVRSFRVKNLLGLLPQTDLPSSERLNGRKEKSDSDSEDGHDDAALDADASKAFEEFD FLNSMDVKEKGSDADDWTGKGASYEKLIKQYKDDPKVKRRSRTSTEESDEKTSSEVHK NLETDVPPGIKSAIDASAQQELPTRRQGRRSANFGYGNGNELDVALGMQENENMDIKD EFKDDDDDTNLPPVKWNIKVTLRSHLDTIHAMQFHPVEPVLFTASEDGLIKLWNLDQK KEDKHNSGGGTELEPVYTFRGHKGAVLCLVLSPTGDHLYTGGQDGNICCFNVPSSNGD PFDSYDPRVLSETLTGHTDAIWSVAYHSSNSRLVSASSDSTIRLWEPGNGEPLIRTIG APQPGMIPTSVDFVSTETSHLLAAYTQCYAQIIDIDTGSTVMVFDFGPKVVGTPTMNK IVSHPTMPLTLIGGEDRTIRYFDNTTGAILSESLAHVEGVSSLAIDPNGLYLLSGSHD GSIRMWNMERKSCLQEISAHRKKNDAAVTSVAFHPSRSLIGSAGADSLAKVYVSGSN" CDS join(404874..405059,405109..405237,405536..405754, 405804..406116,406163..406277,407538..407646) /gene="Cbr-sri-20" /locus_tag="CBG_09595" /standard_name="CBG09595" /product="Protein CBR-SRI-20" /note="C. briggsae CBR-SRI-20 protein; contains similarity to Pfam domains PF10327 (Serpentine type 7TM GPCR chemoreceptor Sri) , PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) , PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd) contains similarity to Interpro domains IPR020328 (Uncharacterised protein family T05H10.3), IPR019429 (7TM GPCR, serpentine chemoreceptor class i (Sri)), IPR019422 (7TM GPCR, serpentine receptor class h (Srh)), IPR019421 (7TM GPCR, serpentine receptor class d (Srd))" /note="Predicted" /db_xref="GOA:A8X8Q2" /db_xref="InterPro:IPR019429" /db_xref="UniProtKB/TrEMBL:A8X8Q2" /protein_id="CAP29013.2" /translation="MFTEEQLMTFSYTVDFGEPEWLKIYYHGISIVSTIISFFSMYVI LFQSGKMDGYRYYLFYMQFAGWMMDLHISTLMQFIPLFPVFGGYCTGVLTQFFGIDDS FQTTYTAFTICLVASALNSCFVRKHQAISKISSKYLLNDIPYIIVIFLLNFYPVVAAT LLYLSMLSKENQVILVKEVYPNLVDNFAHLSNYVVFDSNIWAIIFFAFIFFGCTYTLI LIVTTTYSMFKTLEDNRKHISSSNYAKHRATLRSLLAQFATCFLIVGPASIFSLLVVI RYEHSQVATHWIIVALTLHSSANAIVMIITYPPYRNFVMLWKPNRCRSSTIGLPICCE FNSPRHNFLSDQELFRVARILT" CDS join(408601..408747,408797..409024,409070..409411, 409678..409886,409936..410016,410065..410175, 410219..410372,410420..410512) /gene="CBG09596" /locus_tag="CBG_09596" /standard_name="CBG09596" /product="Protein CBG09596" /note="contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domain IPR011701 (Major facilitator superfamily)" /note="Predicted" /db_xref="GOA:A8X8Q1" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR020846" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8X8Q1" /protein_id="CAP29012.1" /translation="MSCWGNYYRCLILFVAFLCLTSICSNYIIINFSFICMQEDLTDF VVVNGTKTNIYTYDGDHKKYIMWAVGAGTVLGTVPTNWLVVKFGAKWTFLVAGLISAA STALIPLAAKYDYYLLLFLRFVQGFAYSTDFAAIGIITVRWAPLNEVALFLAILTCFT GAASIITNSVTGFICESSFGWKYAYYLHAFVGLILFALWAAFYIDDPQDSKRVSDREL TGIHKNKSAAHLDKKSDIPYTKLFTSPVVLIIWLNAFFEMSAVIFFTTYLPIYFHQVL GFSIQQTGVIVAIILGVNIPLRLASATFSDRITFLTEKTKIIIFNSISVGLSGLLLAC TAFIPSEFNVEICWYFVGIMMCISVNCGGFYKCAALHARQHAHIVIAAIQFTKCLALF TGPTLVAFYVKVESNQSQWIPVYLCLGLSMFAANLISVFVFTDEPAKWTDKYAEVPLE EAKC" CDS complement(join(410705..410978,411025..411247, 411295..411431,411480..411712,411758..411897, 411941..412051,412104..412554)) /gene="Cbr-ugt-33" /locus_tag="CBG_09597" /standard_name="CBG09597" /product="Protein CBR-UGT-33" /note="C. briggsae CBR-UGT-33 protein; contains similarity to Pfam domain PF04101 Glycosyltransferase family 28 C-terminal domain contains similarity to Interpro domains IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase), IPR007235 (Glycosyl transferase, family 28, C-terminal)" /note="Predicted" /db_xref="GOA:A8X8Q0" /db_xref="InterPro:IPR002213" /db_xref="UniProtKB/TrEMBL:A8X8Q0" /protein_id="CAP29011.1" /translation="MKIALFSILLILVGSASSFNFLVFCPLYAHSHHKFLAKIADTIS DAGHNVTFLAPIILRKYENVKYLESTRDIVYIQPSKKLESLGVTSDYSKFWSKDATAI QFVPAIKAFTRMFQQLYEDLKNDLSVLDELKNRKFDAMVFEFLCATSYPIAEYLEIKA LFPSLSMTHHPFMSRLIGEPSSPTVMPSMISSFGDDMTFSERLQNTIGDVFFNLFVHP PPMASFKNPERLIDIADMTARSPFLFMNGNPYLDYPRALLTKTVMIGGISVNATQMKQ EKISEEYNQILDKNKKNVLISFGSMIFSKDMPTIYKQTIVRVIASLPDVTFIWKYEED DVSFSKNLPNLHFSKWVPQTALLADPRLSAFITHAGLGSVTEFSYMGKPAVLIPVFAD QLRNSKTLERHNGSITLSKYDLSNFDKLRSAIKTILTEERYKINAERLAQQLQDQPVS PHDLLVKHAEFGAKYGELPNLDPISRKMSYISFYMIDIIVFVGSIVFLVLALFFVIAR WVLRQCLRPKLKVE" CDS complement(join(412768..412972,413021..413076, 413120..413631,413675..413813,413860..413898)) /gene="Cbr-aqp-5" /locus_tag="CBG_09598" /standard_name="CBG09598" /product="Protein CBR-AQP-5" /note="C. briggsae CBR-AQP-5 protein; contains similarity to Pfam domain PF00230 Major intrinsic protein contains similarity to Interpro domain IPR000425 (Major intrinsic protein)" /note="Predicted" /db_xref="GOA:A8X8P9" /db_xref="InterPro:IPR000425" /db_xref="InterPro:IPR023271" /db_xref="InterPro:IPR034294" /db_xref="UniProtKB/TrEMBL:A8X8P9" /protein_id="CAP29010.2" /translation="MTPPPLNNDVPIGHRRKSFISSIQGAISTNNQKADRARPYSLIS RCYAEFLGTFIFIFSGTMQANVYDISQPVGLSHAALTHGFATIVVIAVFGKISGAHLN PVVSWAMVLCQKLPPLALPFYMASQFFGGFCGNLLSACLQRKRDFLVWENYSSIRYTL PSQGVEYGYDKVHNSTYEKTILLTTQLSATSSGITHLGVNHEWWEGLMSETITTYFFV TVILMLVVDSEPTEATPLYLGLMVIVNIFATASITGTAMNPVRALSPNVVAEIVLSTS SLPSKFWTYHYIYWAGPYLGSTIAVLGYKLLLSKNDRLIP" CDS join(415468..415594,415806..415910,416734..416900, 416947..417073,417131..417297,417349..417766, 417814..418019,418067..418204,418253..418574, 418623..418828) /gene="Cbr-ncx-5" /locus_tag="CBG_09599" /standard_name="CBG09599" /product="Protein CBR-NCX-5" /note="C. briggsae CBR-NCX-5 protein; contains similarity to Pfam domain PF01699 Sodium/calcium exchanger protein contains similarity to Interpro domains IPR004481 (K+-dependent Na+/Ca+ exchanger-like), IPR004837 (Sodium/calcium exchanger membrane region)" /note="Predicted" /db_xref="GOA:A8X8P8" /db_xref="InterPro:IPR004481" /db_xref="InterPro:IPR004837" /db_xref="InterPro:IPR030243" /db_xref="UniProtKB/TrEMBL:A8X8P8" /protein_id="CAP29009.2" /translation="MQSLHRRTLYSASNRRLRTQIAVILLAGALFFLIVLLPFIKTDI PNDILSVDENGRLRRTRRSVEYEFDDCRPRIQTTSNGNSSQFPADFFSLETRRRGGVI VHIALLIYMFVALAVVCDEFFVPSLSVITEVLSISDDVAGATFMAAGGSAPEFFTSLF GVFVAQDNVGVGTIVGSATFNILCVLAFCTLFSRQVLHLTWWPLFRDMSFYTLSLFLL LIFFGDEVIKWHEALIMFSIYIAYGFFMKFNGFLELKTKQFLFRKVGIGSEVVPTTSV EAAAGCTPRSPHSLGAQGPRRSFPMIHGGQEVRKSIAQLVIGDEDDTTSSSSSSESER SIKLKPVANGVPEIRQNGRTIMVKPANDPDSAFNNQNSITTSVPPIDFGESHIIVINN NNNNKRKNGNNGTTHLTPVETVNPSSNGHLEVFQPNGNPVPPIALDNLSVASSTAEKP LDLSWPEANHKKIIYLFLAPITFPLAYTLPDVRKPKLRKFFAITFIGAILWIAAYSYL MVWWANTIGETFGIPTEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSIGSNLF DVCVGLPIPWLIHFLIGVFKSEPTQNISVTSNGLVCSLGLLFAMLIVLLTCVAISRWK MDKFFGLLMIFSYCGFCMLCILLETGHLKCPLRNSC" CDS join(420684..420769,421143..421506,421552..421913, 421943..422040,422122..422278,422324..422866, 422939..423102,423153..423391,423439..423717) /gene="CBG09600" /locus_tag="CBG_09600" /standard_name="CBG09600" /product="Protein CBG09600" /note="contains similarity to Pfam domain PF03137 Organic Anion Transporter Polypeptide (OATP) family contains similarity to Interpro domain IPR004156 (Organic anion transporter polypeptide OATP)" /note="Predicted" /db_xref="GOA:A8X8P7" /db_xref="InterPro:IPR004156" /db_xref="InterPro:IPR036058" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8X8P7" /protein_id="CAP29008.2" /translation="MAISKIKWFFIVFGTVYFLESIGGFYMTSAVVFIEKQFQIPSRL SGTMVSAGDFAYIPVVIFTSYFGGKGNRARWIGAGCILISIANFMIASSNFLFPVEHA NVTTHIPSALAHQIDRNLVNGGFNYTEHQWLEQLHPLIDPENKVVMNYIGDEKSDLLQ KYIEYCHYHKGSDICARLEKEIAQKFPMTDAKMSNVRAMVALPYGFCHSMLNFVRSQH YACKKDQSTLGPFMMIFGGLLVLGVGRTMPFSLGLPLMDDNVKKQNLPLYFCYSFLAF MFFVKILGPVIGLLVGGQLNKLYVDFNPPQGLTPLDPMWIGCWWLGFLIFGTLLFGPS VVLYFFPSDDLDINAPDELDDEGNVKQRKRLNLVDRHIKKDEQGNALMPETVKDKVND FKETITNLMKNKIFVGAMFGRIIDVLAFKGYFVFQAKYLELQFGVPQYRIQRYIASTG IVGFACGVMLGSVSMKYFKLQGRKAAAWVAVCSLVAALISFANGTVGCKSVIGQIGDQ IKLNGPVFDGCRDDCMCENVPLYPVCDVNGNAHYSPCHAGCAMGWKNYSIFDNAKANV DTLIFENCACVENKVKEVSRSYCRTDECEERFGRFFMHQAFGAIFGGLGVVPGMLIVL RAVPPEHRSVSLGFNGFLVSLLATLPSPIIWGKIIDMSCLLWQKACDVRFFYSDSVLE IDFFRLHVIYGCLRIFSLISDVWVWYWASGLKLIEEETPEEKEKEEAEKLNPKRKESF KEAAEKVEKTAYELDQLIDQRGS" CDS complement(join(424047..424184,424230..424469, 424721..424850,425777..425832)) /gene="Cbr-crp-1" /locus_tag="CBG_09601" /standard_name="CBG09601" /product="Protein CBR-CRP-1" /note="C. briggsae CBR-CRP-1 protein; contains similarity to Pfam domains PF00071 (Ras family) , PF08477 (Miro-like protein) contains similarity to Interpro domains IPR013684 (Mitochondrial Rho-like), IPR003578 (Small GTPase superfamily, Rho type), IPR005225 (Small GTP-binding protein domain), IPR001806 (Small GTPase superfamily), IPR003579 (Small GTPase superfamily, Rab type), IPR020849 (Small GTPase superfamily, Ras type)" /note="Predicted" /db_xref="GOA:A8X8P6" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8X8P6" /protein_id="CAP29007.1" /translation="MENKLKLVVVGDTFTGKTSLLVAYTKKQFLDNYSTTVFDNWAVS VHIDHKSYAVSLFDTAGQGSYEKIRCLSYPHTNIFLVCFSMTDKNTLESCRTIWIPEI RKYAGDNVPIMLVGTKNDLVEGAHLHSVVTEDYAKKVAQEIGCHKFFSCSALTHKGLK RVFDESFLAAVGVKFEEEKPNPCCIIL" CDS complement(join(429421..429614,429818..429880, 429969..430717,431014..431108,431189..431272, 431457..431573,433990..434141,434187..434661, 436028..436150,436454..436540)) /gene="Cbr-egl-9" /locus_tag="CBG_09602" /standard_name="CBG09602" /product="Protein CBR-EGL-9" /note="C. briggsae CBR-EGL-9 protein; contains similarity to Pfam domains PF01753 (MYND finger) , PF03171 (2OG-Fe(II) oxygenase superfamily) contains similarity to Interpro domains IPR002893 (Zinc finger, MYND-type), IPR006620 (Prolyl 4-hydroxylase, alpha subunit), IPR008162 (Inorganic pyrophosphatase), IPR005123 (Oxoglutarate/iron-dependent oxygenase)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X8P5" /db_xref="InterPro:IPR002893" /db_xref="InterPro:IPR005123" /db_xref="InterPro:IPR006620" /db_xref="UniProtKB/TrEMBL:A8X8P5" /protein_id="CAP29006.1" /translation="MSIASLGDTGGTKINEGATSSTSSLFASLMLPSSSSTILQCSYC GSSFSPNQLQTCLFCGTVSYCSKEHQRIDWVTHKMICKSLQTRGMVPSNPIPQPIPAS LAPVPPSVTFDDSALTTSLLLSLQHNPIISQPVPNFQPTFSILTNPEPEPVIPTQIPQ RIENPAPAISFSSLGSAFKPYRNTNVFNSLSSESVSSMSHEASLERLSSASLALLSAS STAQSDLNQLAQVLSLAGDSGASLAPLVHPSTVSLAVPTAADEPMMIGGERLIPTDDP DIQIIETDGTSSAPKPRKRPTPTSTADPKIVYKDHNKNVVYSTTLQEHQRHLQSRGLV VNLHQAMVMRLRYIAEHVIRSLNEFGWAVVDNFLGSDHYKYTAKEIERLYERGLFGPG QVMEGKNKDESHIKDIRSDHIYWYDGRDTRAKDAATVRLLISMIDSVIQHFKKRIDHN IGGRSRAMLAIYPGNGTRYVKHVDNPVKDGRCVTTIYYCNENWDMTKDGGTLRLYPET SRTPMDIDPRADRLVFFWSDRRNPHEVMPVYRHRFAITIWYMDKSERDMALTKGKEGD GACTSKKENDPTSSPPDSDELDVPPRPKKAPSTHELHKLDLRMFPSTSSDPTIISAAS EDRVDSCNDYQSTSSLAHPDSTDSGVSLSTLQSRHHHHHHERRNSIQSLSDDYRSERS NQRRSSTSSDQDLDEDDLPPPPTDNPEYII" tRNA 431357..431429 /gene="CBG28724" /locus_tag="CBG_28724" /standard_name="CBG28724" /product="RNA transcript CBG28724" /note="C. briggsae predicted tRNA" CDS complement(join(440834..440968,441023..441165, 441215..441359,444224..444424)) /gene="Cbr-chw-1" /locus_tag="CBG_09604" /standard_name="CBG09604" /product="Protein CBR-CHW-1" /note="C. briggsae CBR-CHW-1 protein; contains similarity to Pfam domains PF00071 (Ras family) , PF08477 (Miro-like protein) contains similarity to Interpro domains IPR013684 (Mitochondrial Rho-like), IPR003578 (Small GTPase superfamily, Rho type), IPR005225 (Small GTP-binding protein domain), IPR001806 (Small GTPase superfamily), IPR003579 (Small GTPase superfamily, Rab type), IPR020849 (Small GTPase superfamily, Ras type)" /note="Predicted" /db_xref="GOA:A8X8P4" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8X8P4" /protein_id="CAP29005.1" /translation="MAKEEDEKCLKCIFVGNAAVGKTSMIVSYTTNAYPHNYVPTAFD NFSVVVLVDKKPIRLQLHDTAGQSSFDTLRPLCYTDADVFVIVYSVVDLQSFEDVSHH WYPEVTKKNPGTKLILVGTQADQRWQIRGNTVTQLRGKALAEKIGAEFFECSALTQHN LKEMFDSAILAGLEGKKSREKRSNFYTKSSKLKERVAKFITRTRNLI" CDS join(445956..445974,446535..446625,446936..447003, 447055..447353) /gene="CBG09605" /locus_tag="CBG_09605" /standard_name="CBG09605" /product="Protein CBG09605" /note="contains similarity to Interpro domain IPR013838 (Beta tubulin, autoregulation binding site)" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8P3" /protein_id="CAP29004.2" /translation="MRDIRPYTAQLPCCRDRFGEQACQSLRKAQPALFEKRCLTDHDF SSIDCCGECRKYIERNKISSENSRSLQKAPAMCKDKHSIGFCRRFKASGMGKYSCSDA EFAVRVCRHSCGYCNDELYSMKNAPSMCSDTNKAIPIVNGTHLYWAFGREDTKKAL" CDS join(449183..449396,449440..449696,449744..449941, 449988..450330,450381..451595,451644..451711, 452511..452798,452850..453080,453131..453241, 453368..454009,454059..454127) /gene="CBG09606" /locus_tag="CBG_09606" /standard_name="CBG09606" /product="Protein CBG09606" /note="contains similarity to Pfam domains PF00450 (Serine carboxypeptidase) , PF00014 (Kunitz/Bovine pancreatic trypsin inhibitor domain) (2)contains similarity to Interpro domains IPR002223 (Proteinase inhibitor I2, Kunitz metazoa), IPR020901 (Proteinase inhibitor I2, Kunitz, conserved site), IPR001563 (Peptidase S10, serine carboxypeptidase)" /note="Predicted" /db_xref="GOA:A8X8P2" /db_xref="InterPro:IPR001563" /db_xref="InterPro:IPR002223" /db_xref="InterPro:IPR020901" /db_xref="InterPro:IPR029058" /db_xref="InterPro:IPR036880" /db_xref="UniProtKB/TrEMBL:A8X8P2" /protein_id="CAP29003.1" /translation="MLTRLLVLLFGCTAVNSQQLLSNPRCNHWPDRGTCELEFQVKWY YDRYDHRCRRFFYGGCEGNENRFNSLEECSSQCHYEEPSNRDRCFQPHDPGHCHSDIE RWFFDQDKKQCVCSWWSGCGGNSNIYYSYNHCMLICGEYAEHGPGIDEKYWGRQMNHT MSAESAQIFNNPTGSFGQYSEEPYPVQVPVDNSYYNNHQRHSDGWNNQQQLLTINISH SDDGPRYFHAAPAVTVPFLSRAQVFKTQADGLTIHRYDSEQRPMQVIDQNSNWQIQEQ APVQDSGYMKRRFKIAKKKIPPRMIHLGTRPSSPSNSYRIQLDGDSSDSNRPVSYQVV REQDAHVQQHNQISQSLQDEAEETQKRIQETLRRNYYEQARYRRPPVQRLPPPPPPHQ NTHPDNQNYHPELVNQFKSHLDEHEKALRRKLEAQFPDHIITLIPHIETVRHPDGRNV VRQRIQWTAQPKGARISEHAPIPPVAQLPPIQPIQPIEVQPTYSAPTFAPQEPEETEE PTMSPHEIARLKHEEMQRKFKEEMEKRQAEQKRQQEEQKRQQEEHKMKIQELKATQQK ERERIMAERERAEAERRIQYENEMRQRAEEYKAKMRMTTTPTPTTTIETTTEYIQFAY PTVPVRQVVYDADVRRPIPTSKSMAEPIDHVRPIIENVTPASLSLEDIIAMDNQKSDY EDEYDVPMDFPDTEAPPLTTRAPPVTPRYVPPPPPQVSQPKAPVNGGMGMSPIVLPPN SGKKSKLFAPPSSEEYTQEVDFDPYMNLLLILSLVSIALAGSSNSVNTWGGVIQYDED WGYVDIRANAHTFWWLYAAKPANSQRPLFVWLQGGPGSSSSGFGNFEETGPKTLNGTD NKATWLQVADMVYVDNPVGAGFSYVDDKSAYTTDITQIGKDLLTWLRRFLALHSEYRT RPFYIFCESYGGKMSAQFGKVITDAVKAGSLQLNFRAVALGDSWISAMDYVNTWGPYL YANSFLDDHQLNLVNAEAAKCQALVDQQKWSKATNCWGNMENLIGVETNGVSWYNILK KGDTDDWSSSAAMRSNRVITSTRRLYNRFVAPQNDDTLSSYMDTVVRQKLGIIPDKVK FGAQAGDVFSFQEGDFMTPIWETVDQLLKDGHNVVVYNGNEDLICNTMGTAAWVNRLT WDGAKTFNSTTRHSFKTDSFPLAGYYKTYKNLQFWWILRAGHMVAYDTPESAIFMLKA VVKQYNA" CDS complement(join(455222..455740,455788..457050, 457258..457482)) /gene="Cbr-pap-1" /locus_tag="CBG_09607" /standard_name="CBG09607" /product="Protein CBR-PAP-1" /note="C. briggsae CBR-PAP-1 protein; contains similarity to Pfam domains PF04926 (Poly(A) polymerase predicted RNA binding domain) , PF01909 (Nucleotidyltransferase domain) , PF04928 (Poly(A) polymerase central domain) contains similarity to Interpro domains IPR007012 (Poly(A) polymerase, central domain), IPR002934 (Nucleotidyl transferase domain), IPR007010 (Poly(A) polymerase, RNA-binding domain), IPR014492 (Poly(A) polymerase)" /note="Predicted" /db_xref="GOA:A8X8P1" /db_xref="InterPro:IPR002934" /db_xref="InterPro:IPR007012" /db_xref="InterPro:IPR011068" /db_xref="InterPro:IPR014492" /db_xref="UniProtKB/TrEMBL:A8X8P1" /protein_id="CAP29002.2" /translation="MAASVTDRTPHLGVSQPISTLRPDQKDIVMTDQLIATLKKFNSY EPKEETEKRMEVLRSLNRLVKEWVKKVTAIKIPSGEGANAGGKLFTFGSYRLGVHSSG ADIDTLAVVPRHIDRTDFFTSFKEMLRQDPNVTELHGVEEAFVPVMKLKYSGVELDIL FARLALKEVPDTQDLFDDQLLRNLDQESVRSLNGCRVAELLLKLVPRQKEFCIALRAI KLWAKNHGIYSNSMGFFGGISWAILVARACQLYPNASASRIVHRMFFIFSTWTWPHPV LLSALDQDRNDIPTLCDLIWDPRKKNSDRFHLMPIITPAFPEQNSTHNVTRSTCHIIR NEICEGLEICKDITEGKATWEDLFKEVKFFSRYKHYIGMFFFLNCDHNLSAYLSSDHG YIHRRRGIELWRFLESRIRLLVQSLERNQDILIAHNDTNKHRPSPNAKFDVRPENTRI TIWFIGLEFAEHATNLDLTSEIQRFRTNVELQASGVKGIGPNSQVEIDMFYMKRTRLF SIIGAAALKKGRDWKPPKNPPPPMGQVPYRTTVARTSSTNSVPTTPTTLVAPSTPLSE AMPSSEPDSTTNNGTPVSRKRLVQEATSTSETVTTSTLEDVPPEKRTRDDTLEEPILE MVVEVANGVVEESREVELDKDNGHLNGSNGLEASEKHMEVPQSV" CDS join(459026..459118,459168..459538,459584..460198, 460242..460473,460516..460611,460658..460917, 460966..461224,461270..461365) /gene="Cbr-snf-10" /locus_tag="CBG_09609" /standard_name="CBG09609" /product="Protein CBR-SNF-10" /note="C. briggsae CBR-SNF-10 protein; contains similarity to Pfam domain PF00209 Sodium:neurotransmitter symporter family contains similarity to Interpro domain IPR000175 (Sodium:neurotransmitter symporter)" /note="Predicted" /db_xref="GOA:A8X8P0" /db_xref="InterPro:IPR000175" /db_xref="InterPro:IPR037272" /db_xref="UniProtKB/TrEMBL:A8X8P0" /protein_id="CAP29001.2" /translation="MHQEKGKRVKSKSVVNDDTNSTATEEIVPVKKTSNATKISNIGF RSMTNLALENMGLDTKMEGPTWTSKWESIAATLSFVTCSGNFWFFPFLCGYYGGWFPY QFTLCFIFIGVPLLYMETALGQYASASPLSVFSRMAPAMAGLSAGMCFIMVFRTISLS VWAIYNLTITAHATRSFWNEPEWENCPNSKLGDYCVNYKLAKECTWAQPGSSEQCDHY QDVLIATRGFQQRKSPFMSFVHGLMYTVRVRDHYEHSFFFQKDLSVNDWEPPSYTSIT CAVALWITIGIVSIGGSKVLGRTGIVSLVLLLIGSLMLISFGISFGESGVVVTSFFYP SEAFDDKWMWVWSWTDAAAHALRALNVGCGGIQKFASLNNFHNKIHKDVLIVSSISYL FYLCTGIFSFMFMAVIGKEYYPDLEASERIKLYATPALIESVISEKLTQCKLGVFWVF LFWVTLAACSIQGISGYIWVMSSMIVERLNGSRRKYGKPLTGWHKRAIILTIMSITGL ISSLPFLGNGGINLMSNIETHASYGTIFIAFVEIITVSYLYGFKRFSVNIRAMIGGRG PPNIFWWLNWLVISPLLLIVTFGCIVATFGQQKAFNDTSIITCVIGYFLLIMPFVLVV FYFLREEYDRRRNMEPFVVMIRATGDWGPMNPENRRKAVKYERQLRVRY" CDS complement(join(461527..461752,461801..461900, 461946..462113,462157..462250,462317..462406, 462455..462546,462607..462697)) /gene="Cbr-set-22" /locus_tag="CBG_09608" /standard_name="CBG09608" /product="Protein CBR-SET-22" /note="C. briggsae CBR-SET-22 protein; contains similarity to Interpro domain IPR001214 (SET domain)" /note="Predicted" /db_xref="InterPro:IPR001214" /db_xref="UniProtKB/TrEMBL:A8X8N9" /protein_id="CAP29000.2" /translation="MSRQEYYRHLDVFHEFEDDRSAGFENSTNDDAPETFGIYGTHLL TNDDFRKETLENIKVDNDVLKTLCVTRVSHRTRRLLRHFGDTVGAAEIIYLANEKCKE NPCAEVSSLPFVLFPFTSKKGLFATRDILEGEFVLARVPVLLTSPEECGRDRMGLSLP NIILYGGLHSDFSQFKVLNVPPNRKRQRETDAFQIRRKMRAIEAEANNNFCQPQSKYF SDDEEYIQETAYDKYDICIDVTDSNDEMRAIRRNCEPNCVIRYVILHQRIEVFITAQC DISEGDEVSF" CDS join(465516..465568,465617..465726,466036..466125, 466577..466748,466796..466889,466934..467034, 467391..467635,467680..468165,468221..468321, 469426..469771,469818..470191,470241..470299, 470510..470610,470655..470851) /gene="CBG09610" /locus_tag="CBG_09610" /standard_name="CBG09610" /product="Protein CBG09610" /note="contains similarity to Pfam domain PF01490 Transmembrane amino acid transporter protein contains similarity to Interpro domain IPR013057 (Amino acid transporter, transmembrane)" /note="Predicted" /db_xref="GOA:A8X8N8" /db_xref="InterPro:IPR013057" /db_xref="UniProtKB/TrEMBL:A8X8N8" /protein_id="CAP28999.1" /translation="MSFTLSRDNYAFDDPCRKPTQTSTCSSEDGSSNDHKTNNSHGDV DMSKPFFNPAGLNWFVTGLFVVGDLAGGGIVALPTAIIQAEFWTGLIVCMILIGVVTY TAYVLGLSWNILLSTWPEYRHHCRKPYPEIGGRAMGPTCQLLVSICIDVTQFGISVVY LLLASKNIQNMIIAFSSGGNLSFCILVLIVAACLLPLCFLKSPQDFWWAVVIAMMTTS AAVILIIVGSIIDYGTCHEAAQLPPFKTTNLFLSMGTLLFSVGGHSAFPTIQHDMKQP KEFTRSVILAFTIMAFMYVPVCIMGYLVYGDSLRDSIIPSIQTVWIQQAINILITIHC ILTLTIVFNPLMQEVEDIFHVPQKFGIKRVFVRTGIMIAVVFVAESVPTFGPLLDLVG GSTLTLTSVILPCLFYIYLNAYKRKEEATGKPGTGPVGWRDVFTYNEKPTLTICIIII IIGLIGGGCATFSAIVELTSTQFAVPCYVSVFQANRIIVDGHPRFKCPVSACNSVIHE NDINAVLDEKEPALEKYMSIVHRRYLQHKQYKHSIMAALPSSDTKRCPLCRSVYMHEP GCNYVICANSACNSAFCWQCEKPVGRSCSHFTTASTCRLGYKDFERIFRSVQLALDVN FIILWILLPFVYLIAFLYIPISIIFLVPASLAYDAYRKERDSHDFLVPIDVITIIFRI VIGIVIGIVVSIPFAIGSIVSGFFIVFFYMGFLFIRTVPCGLSGDRVGTILCFMRWAG RIFKIGPYGKLLEEARRERRDALVKLEANQDDFENALSESDGTSGEVELSSAPQQGTS SDFTTNSKTYEKTSNTVTTTTTTTTKTTTTKTTTTEQPTTIRKT" CDS join(471236..471326,472102..472250) /gene="CBG27077" /locus_tag="CBG_27077" /standard_name="CBG27077" /product="Protein CBG27077" /note="Predicted" /db_xref="InterPro:IPR040279" /db_xref="UniProtKB/TrEMBL:B6IHF3" /protein_id="CAR99333.1" /translation="MMRIKDSIHMRSSGSPFDTYREQRAAMNLISRRGDALRRRCAPY APYMPHTGVLSLYPIHRRVLRRPSIMRMRAQDLCH" CDS join(473438..473544,473590..473671,473718..473818, 473864..474008) /gene="Cbr-apc-10" /locus_tag="CBG_09611" /standard_name="CBG09611" /product="Protein CBR-APC-10" /note="C. briggsae CBR-APC-10 protein ;" /note="Predicted" /db_xref="GOA:A8X8N7" /db_xref="InterPro:IPR004939" /db_xref="InterPro:IPR008979" /db_xref="InterPro:IPR016901" /db_xref="UniProtKB/TrEMBL:A8X8N7" /protein_id="CAP28998.2" /translation="MSPPHQATVTFARKTDVSFLMLYLDYKTDESYCPQEVRVDLGWG TNDWWHRINRRVNYPKGWVKIRLVDRLDAPRRVMALRMTVMKNHEKGRDCVIRHFRII GPQYHRHDSINRLILGPTGGLGGVTQERQARSHIMNDHLTVR" CDS join(474419..474631,474684..475421) /gene="Cbr-col-12.1" /locus_tag="CBG_09612" /standard_name="CBG09612" /product="Protein CBR-COL-12.1" /note="C. briggsae CBR-COL-12.1 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain) , PF01391 (Collagen triple helix repeat (20 copies)) (2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:P90728" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/TrEMBL:P90728" /protein_id="CAP28997.1" /translation="MSEDPKQIAQETESLRKVAFFGIAVSTIATLTAIIAVPMLYNYM QHVQSSLQSEVEFCQHRSNGLWDEYKRFQGVSGVEGRIKRDAYHRSLGVSGASRKARR QSYGNDAAVGGFGGSAGGSCCSCGVGAAGPAGAPGQDGAPGNDGAPGQDGAPGQDASE DSVAGPDSFCFDCPAGPPGPAGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAG QPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGPPGPAGAPGQPGQAGSSQPGQPGPQGD AGAPGAPGAPGQAGAPGEDGASGAEGACDHCPPPRTAPGY" CDS join(477517..477729,477782..478498) /gene="Cbr-col-12.2" /locus_tag="CBG_09613" /standard_name="CBG09613" /product="Protein CBR-COL-12.2" /note="C. briggsae CBR-COL-12.2 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain) , PF01391 (Collagen triple helix repeat (20 copies)) contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /note="Predicted" /db_xref="GOA:A8X8N5" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/TrEMBL:A8X8N5" /protein_id="CAP28996.1" /translation="MSEDPKQIAQETESLRKVAFFGIAVSTIATLTAIIAVPMLYNYM QHVQSSLQSEVEFCQHRSNGLWDEYKRFQGVSGVEGRIKRDAYHRSLGVSGASRKARR QSYGNDAAVGGFGGSAGGSCCSCGVGAAGPAGAPGQDGAPGNDGAPGQDGAPGQDASE DSVAGPDSFCFDCPAGPPGPAGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAG QPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGPXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXPPPRTAPGY" assembly_gap 478318..478466 /estimated_length=149 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(479007..479149,479199..479688,479735..479887, 479933..480193,480246..480410) /gene="CBG09614" /locus_tag="CBG_09614" /standard_name="CBG09614" /product="Protein CBG09614" /note="Predicted" /db_xref="GOA:A8X8N4" /db_xref="UniProtKB/TrEMBL:A8X8N4" /protein_id="CAP28995.2" /translation="MSTDRSITIQLLTMIIILLFACLPLFTFGSHLSHLPAERKACKS EKITYIPVEKDFYDEPIELFFDSGLNFNHIPVTKILKEECGLIDKETPSLSRRDKRSP FARGIYRLSKYFIHFYQKSKKMLKPELLRGIEKVVSKLNHIKPSTGKVKFAGIGKFFR EVWENLEDVLREENDDHVNVILEHTFRTSLQLLIHQNETSEMILNHPKILDKIKKRIP VENPGLLSSVRVSSVECHPFHRDSQAVLYFKLRIPKVERLTIEKCDDIGTITQNSYQF YEIPTATFKRNGHVFKVDLEKCVSDSFTFCPFDSIRPTDCSKEKLQHCNLKKEELGNF SRELQQGFAVYGDFKQILMEKNELQDLWLVKPRTLYHIIPQTNETIMIGKETLKQDTH SNVTVIRQVQF" CDS join(481959..482065,482113..482204,482249..482474, 482528..482690,482737..482874,483053..483208, 483254..483379) /gene="CBG27076" /locus_tag="CBG_27076" /standard_name="CBG27076" /product="Protein CBG27076" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHF2" /protein_id="CAR99332.1" /translation="MCSLNLITLLVVFFTSCATSEQLNEARKSCKVKKIVIPSGTPVL SKFIYLNYHDSFRSNVVQEECENLAESDSFRTKRSASVVWRAFAETAKKVGKPALKYS LRAASVGKKVGKYGSKAIGAGVKFASSDFASGILGAVVKLNRKYEMDSSEELVERRDR EQPKRKEIQIFRRNLINLLDNNEIQGYILQDEQVQTIISKMVDGSKLRASDVECIKDD FTDTYRIRFRVEVDQNTWVKARRCNHPTVCPETALKMEACAAEFVQKCKKSKQPVDAS SNVSRILPSGVVYYGNSNVLTLRRHNRTMKFRVYPHELEYFRISEGDEIWIGNDLHFY V" CDS join(484719..484853,484898..485176) /gene="CBG27075" /locus_tag="CBG_27075" /standard_name="CBG27075" /product="Protein CBG27075" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHF1" /protein_id="CAR99331.1" /translation="MHIVSKCEDIGEDYNDTYQFYDISPSWMYQINNQTYSIDGTLGQ TGSDFLVFPKTAIKPEKCSVHSIKNCTKRTIEKYLNAKSTSFVRQLSGGVAVYGTFKV YGTVYGTFIALFFPKTSVIFRRYLIYTSIELLPII" CDS complement(join(491069..491098,491346..491498, 491589..491630)) /gene="CBG09617" /locus_tag="CBG_09617" /standard_name="CBG09617" /product="Protein CBG09617" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8N3" /protein_id="CAP28994.1" /translation="MRSPMQPPRAVMSQAPAFAPSARPEVQLRQVDMEKVLRSFPTTC QQLQKKEVRTLERSSHQEEVESNQNPASEV" assembly_gap 492769..497250 /estimated_length=4482 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(500362..500518,500580..500725,500760..501227, 501271..501560,501647..501923,501967..502143, 502208..502482,502796..502912,502963..503059) /gene="CBG09618" /locus_tag="CBG_09618" /standard_name="CBG09618" /product="Protein CBG09618" /note="contains similarity to Pfam domain PF02995 Protein of unknown function (DUF229) contains similarity to Interpro domain IPR004245 (Protein of unknown function DUF229)" /note="Predicted" /db_xref="GOA:A8X8N2" /db_xref="InterPro:IPR004245" /db_xref="InterPro:IPR017850" /db_xref="UniProtKB/TrEMBL:A8X8N2" /protein_id="CAP28993.2" /translation="MILPRVLHSYSHYITYYSKIFFLCSICFVTYYGFLRTETDYSKH PHFIYLQAKNQQNSECVIPEVDPWDPSILSYYSKPSSLVCSPVQVQAVKSFENGIITL FQFDESLVKNAKCYKVELSHDENVTDLDVKYGTAVLLDLSKSLTVEIPEEMFQISCES DNMLKTEFFKYHYAQIIPKKANLKNKQIQESTPDFPSVIMIGLDSMSRSNFIRQMPKT YKYMKDSGFIDMKGHMKIHDNTYGNLLAILTGKRGVSVQEFKAEMNESWHIAFDEYDF VWKTFSENGYATLFSEDRPDIGTFTYKNLLRGFLQQPTDHYLRPFWISAFWSLISRRS AASCYDNKPQHKIQLEYIEKFLEKYEKKRKFAFWWSQDMSHGFLNLIGRTDDDFEEFF KKNEKRLEDSVVIVFSDHGHRYDKIRETVIGRIESRMPFHSIKIPDAVTKKYPFIIQN LIANSKLMTTQFDVNDSLRKIASGRIGETITRTDLKRSYSYFDPFPKRTGCFEAGIPS DFCPCFSEIEIPKTEALEAAGELMIIVNELLENTEQTEEYEQDSKELKEYMCTPMEFN NIEYSSVRLPMLSVVNDIKSVDTPLQSFSLQYHIVVRAKPPSNALIESTLEHNLKTDT WSSLGEIERNNKYGNTSFCVNDRILKKICHCISRKTDPATAIL" CDS join(503712..503912,503960..504183,504387..504448, 504492..504685,504736..505008,505053..505307, 505369..505650) /gene="CBG09619" /locus_tag="CBG_09619" /standard_name="CBG09619" /product="Protein CBG09619" /note="contains similarity to Pfam domain PF01482 contains similarity to Interpro domain IPR002485 (Domain of unknown function DUF13)" /note="Predicted" /db_xref="GOA:A8X8N1" /db_xref="InterPro:IPR006342" /db_xref="UniProtKB/TrEMBL:A8X8N1" /protein_id="CAP28992.2" /translation="MNKKFKQLNSYGTSAYGFKHEDYDHFYNYAIGINDTGLQTVYDN NGEIMELKDVSVSSFFKNIIKQNIIDMLWINIDGGEFEYWSYFSKKGQFERLGIIVCQ FNLEVERNDGNTFSKLISNLLESETYIFLRSEIKENPKQLKMVNYQLLRNDFSANTEK FKEFYRYRKSVFYYCGIILIVVFLAVNFLSYDDETIDSQEQNYAEHPRNIVAEQESGQ KLPFTTTPSPPLIPYKYEELPACDFSTDSPKPLHNAEAIANEFFKCASMILLRFAMNP QGMLFNWPYTIYVCDEEDLSSRIPLISFDNGQKQYWAVLPTCQEKTTLVTLGASENTK SEEDIKKLLKDLETFGTDPFHGKNNAYGKFNQVALSTDDHEISMVDSNDKFSDKNFVA TVDQREFFNVTKIDMLWITPNAGNFKYEKYLNKDGEFEKMGVKVCQINIEITKNDADK WFKLINPLVQEKRFIFMRPMATEGGELIRTYLLNVADPECVRKYLQ" CDS join(505926..505944,505992..506149,506189..506452, 506503..506698,506749..506816,506864..507145) /gene="CBG27074" /locus_tag="CBG_27074" /standard_name="CBG27074" /product="Protein CBG27074" /note="contains similarity to Pfam domain PF01482 contains similarity to Interpro domain IPR002485 (Domain of unknown function DUF13)" /note="Predicted" /db_xref="GOA:B6IHF0" /db_xref="UniProtKB/TrEMBL:B6IHF0" /protein_id="CAR99330.1" /translation="MDRNKFNPNQRLCVALFYVISLFAITVLMIHFIQYDSNRKIVPA DKIIVAVEDNDETTKKPLPPFNYDSLPPCDLNEELEKPKLNLKTIQKSFLKCVFPLLT RFFGNPEGLLFNFSSVLSVCDDEEEIRNIDVTEIANDRWVIFPKCNENNTMVTLGVEK ETNAESWLEEKIPNLKMYGTSGLINASRVYEHFENVAIGKEADSVKMEVMENGVLVNK TMDQKKIEEYIKDLNLTKIDILWINPYYGKFSFWDYLKRDGWLSKQGITICQMIIEVP KGHGNQWAEMIKPMQNNSSFVFMKPTTTKSGGAKAFFINYQDPECTRKYLES" CDS complement(join(507197..507374,507418..507650, 507696..507794,508006..508391,508437..508544, 508591..508680,508885..508927,508972..509082, 509243..509395)) /gene="Cbr-ugt-2" /locus_tag="CBG_09620" /standard_name="CBG09620" /product="Protein CBR-UGT-2" /note="C. briggsae CBR-UGT-2 protein; contains similarity to Pfam domains PF04101 (Glycosyltransferase family 28 C-terminal domain) , PF00201 (UDP-glucoronosyl and UDP-glucosyl transferase) contains similarity to Interpro domains IPR002213 (UDP-glucuronosyl/UDP- glucosyltransferase), IPR007235 (Glycosyl transferase, family 28, C-terminal)" /note="Predicted" /db_xref="GOA:A8X8N0" /db_xref="InterPro:IPR002213" /db_xref="UniProtKB/TrEMBL:A8X8N0" /protein_id="CAP28991.2" /translation="MRLFLFLSLLFVLYYNASAYNYLVVSPVFGYSHLKFMSKVTDTL ANAGHNVIVDYYNKDAPSHEQSASVFKFFWDSEVVNNPITGAIAPMFILYNEFKPMCD KVLTDKELHDWIKSKNFDGFVAEAFDFCSLYLGDHLKMNLMPMFSTIKNIPGSYAIGE PSALNFAPSLHTNYGPDQTVWDRLQDITSFTSFHYAFSNLYDRQYRQAYSLLNGEVRT WKDILQTATYFFNNNNPYIGFPIPTLAKTVEIGGFTIDPPKHEKLEEEFDKILNLRKS TVLISFGTVVQSADMPEAFKLLSFLADHRLNLFITHGGLGSTLEVAYAGKPSLMIPIF GDQFLNAKMLSRHGGAISYDKYKLGDSKKLTETVKEAISNSAYNEKALLLANILQSQP IQPKNNLLKHAEFVARFGRVHALEPYNVHYNFIRYYMLDAYAILLSIFIVSLYVFHFI VKFLYRRICRSKPKTE" CDS complement(join(510391..510961,511007..511224, 511272..511940,511987..512187,512233..512498, 512543..512663,512710..512806,512853..513328, 513376..513550,513681..513803,513847..514172, 514846..514902)) /gene="CBG09621" /locus_tag="CBG_09621" /standard_name="CBG09621" /product="Protein CBG09621" /note="contains similarity to Pfam domain PF01433 Peptidase family M1 contains similarity to Interpro domains IPR014782 (Peptidase M1, membrane alanine aminopeptidase, N-terminal), IPR001930 (Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase)" /note="Predicted" /db_xref="GOA:A8X8M9" /db_xref="InterPro:IPR014782" /db_xref="InterPro:IPR024571" /db_xref="InterPro:IPR034016" /db_xref="UniProtKB/TrEMBL:A8X8M9" /protein_id="CAP28990.2" /translation="MEDVDLGKDRTQLIDFVYANGNGNGSASNLNQRNNGSSNNIPLS EKAVKQPLQSQPQSPPPPKPQKQKSPAKPKKKIACAPGSAICLFLLAVAAIIFAAFLG HYLTKQNYEMMQFKNSNESMVVCKNYTRPHKKTHRPIVNEEDADENDAIKQPTKEELA LPKSVQPVWYDVSLSPKTGGNGTMGLALVKLNITEPTNKIVLNAKGIEFTKNLEKIQL SKEATKRSKKSAEEISANVTNSKSEMPEGSGMRPEEESVPSTTTTTEATPVSSLVDTG IKITGIEFNEDLEQVVLTLDQELKKGSEVVLKIPFTSKVTNSNGLKEYKYKTPNGEER SMFTTQPSYAYMRHVFPSFDQESFKAPAALTLMHSNGSVVVANTEVKTEDDGDSLTST LKKVLDPDFVIGDLVANEVNTTSGLTIRIWTRPEVQHYTEQALDYANQAIDALEHILQ SRLESKTLDIVAVPGFQPGNRVSPSFIVLPEEDVLYNEHSNNINQKAHLARVLSNRIA AQWFGGITNPEEFGTFWLNDALPKFLEVEALEKILDVKSDDLWTYELEKIFERDATAT SQPLRVKNVFSATDIAAIDHEFIGKKGAAVLRMIQKSVGETAFNKAIRSFVSSYRSAY PYDDGLWKSFQKAIGQKLKGWNNEPLDVAKFVNTWVDQIGFPLVSVDKLDDENVELSQ ERFKNDHKTKEQFKFRNAKYWFNWEVPLFLKSSGPVGNVSWLHEAFRLPLNTSDSIYL NTDSNGVYRVNYEEIRWNEIAKYLEKSHGKLSERTRARLISDVFALANSGALPFETAL NVTSYLPMETGTVPWLIASRIFKKLTQRLEGAPIQEKLNNYIYEKIHKEFDKVNTSPD IDSNYLESLLHSNLLDLMAIVKPAKSNVKLNQIFVESFLAPCQFSGNFSSDCSEVPGE LREKVYCNGVEFGNDTVFETVKELAAKEVDETEKVILQNSLACFRDPRVLRRMILENL NSKTDAIQLLKKMNSRPVGREIATNWIIDNWSTILKKKFKNDSETLNAIADAGIVLNN EREKSTIETFMEHHRKSTNGIESLDRKIEEATTDIYWRKQRVMELNDYLDGKMKGPTK EEEEGDSEEQE" CDS complement(join(516897..516987,517052..517644, 517691..518104)) /gene="Cbr-spe-10" /locus_tag="CBG_09622" /standard_name="CBG09622" /product="Protein CBR-SPE-10" /note="C. briggsae CBR-SPE-10 protein; contains similarity to Pfam domain PF01529 DHHC palmitoyltransferase contains similarity to Interpro domain IPR001594 (Zinc finger, DHHC-type, palmitoyltransferase)" /note="Predicted" /db_xref="GOA:A8X8M8" /db_xref="InterPro:IPR001594" /db_xref="UniProtKB/TrEMBL:A8X8M8" /protein_id="CAP28989.2" /translation="MVLKNLRGSERISWKASEHRMDPNKVSQYPSCHPTDIPMDDVSD FLQKISDENNFRLYVYIKVTIGYYVQSHVQATIYLIISSFLFVMSMWSLAKTLFTKVG RVPEKYRPSKELEDRLKAVTPYENNRYVVEKSTPVQLKQQNIILEEMCTFCKVVVAEC DQVGRLKYCYECGHIKPDRTRHCSSCGKCCIKYDHHCPWINMCVTHANYKYFLLYIIY TSILVYWYLLTSLEGAVRYFIIQKWKEDLWKILYYLFSFIAGGVFGYYPLGELIIFHY QLISLNETTVEQTKPAVLRFDNAADYNMGKWNNFRAVFGWGVWMWPIESNEQDGLHFD IRYVSTQQRNRFVRIEEEQSSSAPSADSSTH" CDS complement(join(518480..519745,519864..519917)) /gene="Cbr-abu-1" /locus_tag="CBG_09623" /standard_name="CBG09623" /product="Protein CBR-ABU-1" /note="C. briggsae CBR-ABU-1 protein ;" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8M7" /protein_id="CAP28988.2" /translation="MRFIAIAALLASSLFLVEGTAIRDKRQSCGCAPRVQPSCSCQRT SYAQPQQFSCSCHQNTAPVQKSCSCAQPVQQQTYQVQTSQCAPACKQSCQQQCQVAPS VDQCQSSCQQTCQTSSCYAPTQTVMITTTQAPQYCQPSCMPACEQSCVAQTPAPVQCM PQCQQQCQQQCVQTQPIQQCQPQCQQQCVQQCDVPTTTAAPQIIKINLEISAQCVPQC QQSCQQQCVQQQVPAQQCNQQCTQQCQTTCQQAVPQCQQQCAPQCQQPSAPQCQQCQN TCQQSAPVVQQQCQQQCAPQCQQQSAPVCQQCQSSCQQTQQCQQQCTPQCQQPSAPQC QQCQSACQAPIMTTTAAPQVVTIILEASVSQSAQCEPQCQQSCQQQCVQQQQPVQQCA PACTQSCSQSCSAAQPAQMPCQTQSVNSCTCQQNYSPCGNGQCCKRK" CDS complement(join(520497..521080,521127..521286, 521331..521501,521548..521864,521916..522029, 522079..522317,522992..523284)) /gene="Cbr-ugt-49" /locus_tag="CBG_09624" /standard_name="CBG09624" /product="Protein CBR-UGT-49" /note="C. briggsae CBR-UGT-49 protein; contains similarity to Interpro domain IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)" /note="Predicted" /db_xref="GOA:A8X8M6" /db_xref="InterPro:IPR002213" /db_xref="InterPro:IPR035595" /db_xref="UniProtKB/TrEMBL:A8X8M6" /protein_id="CAP28987.2" /translation="MLSRTVTLYDLDQPLFKNENGSLCEFEEFLKCSHSHSRYVTCTI TIISIPVSFSPSTSLSYYFRAFQSNNLVPVCQFPFLSPPADSYYLPKNSVYQSIKILG MNSLYLLFLVLLGVDAGKVLVYSPSISRSHLISNGRIADALVDAGHDVVMFIPEYEQL TEFTGTKKATVITMRGFSTKYEEEMEGLGVTMFSTSRLGFWERVMFEKSITHMCDDLM AKREELEPLRAMKFDVAFSEQIDLCGVGVIRYLGIQNHLWISTTPIMDAVSYNLGIPS PSSYVPTIEENDNGDKMDFWQRTFNLYMHFGSIAVHRYGTDGTTEVFRKYDPDFPNVR DIAANSSLCFVNSDEVLDLPRPTITKTIYIGGLGVPTVAKPLDEKFSKIMSKGKKGVV VISLGSIVPFGDLPLPSKKGALKAMKEMTDYHFLIKIAKDDENTRTLTKDMNNIDLVE WLPQVDLLAHPRLKLFVMHGGINGLVETALQAVPTVIVPIFADQFRNGRMVEKRGIGK VLLKLEIGYESFKNAVQTVLNTPSYKENAIRIARMMRDKPFTPEERLVKWTTFAIDHG VLEELHVEGSRLNTIVYYNLDVFAFLLFVTVVIFHVFLYAFKFLCFRKRSPVKSSKKN D" CDS complement(join(529422..529530,529581..529679, 529726..529793,529843..529973,530054..530123)) /gene="CBG09625" /locus_tag="CBG_09625" /standard_name="CBG09625" /product="Protein CBG09625" /note="contains similarity to Interpro domain IPR020328 (Uncharacterised protein family T05H10.3)" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8M5" /protein_id="CAP28986.1" /translation="MAVERFLLASILVAAVASESVHWQWREIRCKENETNEQGQASAC ELQLKEHENDENPRVVPFNTCTDETVNGELKTYCDILCPGADTAYRITRWPQQHKTCF THTTYRLERREDNFYLWRSGDCRSSTIGFTIRCEFKSPRDDFLSDQELFRVARRLT" CDS join(531359..531488,531535..531694,531741..531906, 531951..532038,532087..532391) /gene="CBG09626" /locus_tag="CBG_09626" /standard_name="CBG09626" /product="Protein CBG09626" /note="Predicted" /db_xref="InterPro:IPR006150" /db_xref="UniProtKB/TrEMBL:A8X8M4" /protein_id="CAP28985.1" /translation="MAKAFCTLAVLLVSASLGSAKDLKRSKRQLQVYYMCNGGVSQYP CSSNNNCNYNNCNFNNYGNQVILPNSFYNPGMNCNSNCNNLNCNQYSGSWLNGQYVAY SMGSNVYSPCASSCCSNNNNGYNPYATISTNNNNGNYNPYNTLPINGNLPTNTNTNTN TNVNQYLPYGSQQFTGTYQNGQFFCGATEPSGGVCRNNGVCPSGHSCVAGNVCCRCPV GSSAGNCNQQSDCAAGYECMSTGYCCPSQITSGTKLETCLNGQCPLPGYTCGVGDLCY PDSYFL" CDS join(532760..532861,532916..533049,533094..533167, 533211..533288,533443..533616,533659..533819) /gene="CBG09627" /locus_tag="CBG_09627" /standard_name="CBG09627" /product="Protein CBG09627" /note="Predicted" /db_xref="InterPro:IPR019510" /db_xref="UniProtKB/TrEMBL:A8X8M3" /protein_id="CAP28984.2" /translation="MMPTLLKTFLFFQLFACIYTNYNAFFALMVTNPTVVQQVNQIET NLTKTNAQFVKFVHNTSYLHIRLNTIELNETTLPLIQNFLKDLPKAICNVSYSVPALF EGTAVKANTTLHGKVNAMSSTVISSVHQKIYSLLNGTGIPSIDEHVIFHPKMDIVELD DRKHEDLLQIMFNRTGDFKLNTGDFIKEIVLFNATPSGAFHDVIGRAPLAPCSNFTVF KPELLSNRVPIFTNIDDLDFKK" CDS complement(join(533978..534100,534145..534251, 534564..534742,534790..535355,535403..535552, 535597..535693,536061..536217,536927..537050)) /gene="Cbr-dmsr-8" /locus_tag="CBG_09628" /standard_name="CBG09628" /product="Protein CBR-DMSR-8" /note="C. briggsae CBR-DMSR-8 protein; contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10324 (Serpentine type 7TM GPCR chemoreceptor Srw) contains similarity to Interpro domains IPR019427 (7TM GPCR, serpentine receptor class w (Srw)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8X8M2" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="InterPro:IPR019427" /db_xref="UniProtKB/TrEMBL:A8X8M2" /protein_id="CAP28983.2" /translation="MGCDMGSVNFTGAEWLETAVTNLNTAYAHIHPYVSVVLCLAGTA MNIVTVIVLTRPSMRSAVNSLLCAIALCDILVMTSVLVFVTHFLLFAGYRCDPSDYNI YWAYFLYYHSQATVIFHATSIWLTVLLAQIRVFSIRRATSVAGESVTNKKTCFIAVST FIVVCLLNVPNMLTFEIIETPASNWLQCKANETSDDEMLVYLVAPSDHCGLLNVSSTV SILTNFFFQIAFWTNGVLFKVVPCLLLTFSIVALVSIIRDVGKRRKQLAQVMNKKRMP RDHTTPMLVAVLSIFLFAELPQGVLHVFNAIFTKETFYDKIYIHLGDVMDVLSLLNSA VNFIIYCAMSRKFRAVFIQIFLTCLPQKIIRKYAMEAFLDGEVSRMRPTADMTKSEQL ALTSHRVSASSVLLPVSRPDPPRMYSGNLLTADINGGYSHSPRVSFDIVRKESQISVV DFQLVVPSVQQESPSLVQKIIRFFRSPDELSDSPHRRIKLMQCETSTALY" CDS complement(join(545006..545329,545373..545675, 545724..546129,546175..547538,547586..548434, 548463..548600,548647..548661)) /gene="CBG09629" /locus_tag="CBG_09629" /standard_name="CBG09629" /product="Protein CBG09629" /note="Predicted" /db_xref="GOA:A8X8M1" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/TrEMBL:A8X8M1" /protein_id="CAP28982.2" /translation="MDELPVLNNLCKDLYESVDPQVRHRAEMNLAELSESPECLQRCM LLLARGDLTSHFQYPYGPMVASTTLMKLLGGKTSITSTQKLELAKYLLEMLGQGAPQF PSYLVTSLCQLFARLTKQEWTYQSSEASNQAEDAKVEYPFRDPVDSLVKTINMDNLEE SMLAVQLLTMLVSDMNSAAGMESVNKHRKNLSQFRDDFLYEIFSVSLTFLSDNVDRNL NDRQIALLHAVLNLNLQCLLFDYIGSLTDETSEDNCNVQIPTAWRASFTDGKIVQLMF KLLTKLPQESSEKVMTIIAQLASIRRTLFNGTERQAYVQKLVEGVVSVIMNPEKLSDQ AAFHEFCRLIARLKTNYQLCELIAVPCYSHMLRLLAEFTVQSLRMMEFSANSTYFLMT FWQRMVTSVPYVRNNDEHLLNVYCPEIMTAFIESRLQHVENVIREGAENPLDDQGSTL QIMEHLAIICRCEYEKTCKLLTQHFDQNANIWMNGSENDINTTIAEGRLVWLITLIGT AVFGKTTSTSSDSHDKMDGEMIARCITVMRFNDNRLQLSNTTIPLKGNLRLEVSFIHM LEQFRRAYIMDQITRASSVYDTLEAELRIAEESDMLGVIVQKILTNLKFWPSNSELLD LSLSLLKDLSLGYSAVRKLFRLPEVQLLLNNHTADHFIFLGPTIDYQTMKQRTTFYEA LTRLLTTDYADDEEMLQRFLRPLTGTHSHFETKSNSYISDTVEGICTVIQNNCQGIEE EQLKVSYFLICQNYVFIFQKIITGLCRDLRGVAIASTTKAIFQILFEWMYPEVFNIMQ FSVEKWPGCADVITPILRLLSEMVQNRQQRLKFEMSSCSAVLLFKETSKIVSIYGDRL LQLPEVSKDRVYKERYKNIGVIFLILKNALIGAYVPFGVFRLYGDSCLQDALTTFIKL FMSIPQDDFHSYTKIAQNHYNLLEHVVQDNMPFVTNLSVDVFCSLLRSIHSGLSSVDA IVITSACSSLDTILNYLYRRLTRSTPPTNKVGMDPEGDNILIAIKQHPDILAKMLQAV ITLMMFGEVKCQWSLSRPLLGLILIQEDVYSNMKRELTSQQTYDRQADFDQLFTQLMS NVEMNLTVKNKDTFTQNLTRFRRDIALVLKGQSLPANSVSQEMQ" CDS join(549832..549903,550002..550156,550211..550349, 550398..550562) /gene="Cbr-hdac-11" /locus_tag="CBG_09630" /standard_name="CBG09630" /product="Protein CBR-HDAC-11" /note="C. briggsae CBR-HDAC-11 protein; contains similarity to Interpro domain IPR000286 (Histone deacetylase superfamily)" /note="Predicted" /db_xref="GOA:A8X8M0" /db_xref="InterPro:IPR023696" /db_xref="InterPro:IPR023801" /db_xref="InterPro:IPR037138" /db_xref="UniProtKB/TrEMBL:A8X8M0" /protein_id="CAP28981.2" /translation="MAICDLFDKKAITNAIVVDVDAHQGNGHARDFANNENVFVFDVF NPYVYPHDREARQFINKAVHVNSHTTDTSYISELRKQLTQCLENRQNLTPPGFDFILY NAGTDCLFGDPLGAMNLSPQCIISRDEVVFKLAREKGIPICMLTSGGYQKNNAHLIAK SIENLHSKNLINLGIN" CDS join(550792..550923,551519..551688,551754..552021) /gene="CBG09631" /locus_tag="CBG_09631" /standard_name="CBG09631" /product="Protein CBG09631" /note="contains similarity to Pfam domain PF06083 Interleukin-17 contains similarity to Interpro domain IPR010345 (Interleukin-17, metazoa)" /note="Predicted" /db_xref="GOA:A8X8L9" /db_xref="InterPro:IPR010345" /db_xref="InterPro:IPR029034" /db_xref="UniProtKB/TrEMBL:A8X8L9" /protein_id="CAP28980.2" /translation="MIPCLNTLFVLIVGVGIGMAKRHNVRRHLSGAWTDKHCEEPQNL KEELSAWMQISMNGQFDDMALEEWSTNGKEPEICGKSPRAEGSSTIMERALCPWESRV NFQESREPKLIAESVCLCRKSRGSTGAFCMPIIRKVPILRRISCDRSTGLWNYVRSTE LITVGCHSVLPRTQRNVRLANLSSDRVVV" CDS complement(join(552605..552743,552797..553245, 553292..553434,553731..553966,554014..554249)) /gene="CBG09632" /locus_tag="CBG_09632" /standard_name="CBG09632" /product="Protein CBG09632" /note="contains similarity to Pfam domain PF00083 Sugar (and other) transporter contains similarity to Interpro domain IPR005828 (General substrate transporter)" /note="Predicted" /db_xref="GOA:A8X8L8" /db_xref="InterPro:IPR005828" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8X8L8" /protein_id="CAP28979.1" /translation="MRLALVLALVSSLQIFQQSSVDPNQFDTIWQASLVTAAFPIGKF IATCLLSFNNVNLHSELDRCARLLIVGAVISAIPIFRVLLSFVGRFIMGYSAGSGFVC APAVLRISVPESLRPVNFMFLAAAFSMGTFLANSIFLISDLIPPNIISAILTAAAGIF YLVLRPDDYPLEECTETVSIDGDAPEPIKSSHPVLFVFVLMVINVSIGVPLMQTYSTL IFSYYGMPKTSASIVSVLYPILQLIPIMISTRINVQGIEKEPTSRRSESSNSRKRLVL GGYLVAIEAQFFLLLTSSYPYLPEKHQMIAMTVLLLILSISFVIPCNTALCILFEQFD GSNVKTASKSRCVMWFLASISTLTFSKVLDSYGFAVAFLPYFFGSVVSYAIMLFIFPS NQQFVIKL" CDS complement(join(554806..555144,555225..555653, 555699..556025,556192..556352,556859..557009)) /gene="Cbr-ppm-1" /locus_tag="CBG_09633" /standard_name="CBG09633" /product="Protein CBR-PPM-1" /note="C. briggsae CBR-PPM-1 protein; contains similarity to Pfam domain PF00481 Protein phosphatase 2C contains similarity to Interpro domains IPR001932 (Protein phosphatase 2C-like), IPR000222 (Protein phosphatase 2C, manganese/magnesium aspartate binding site), IPR015655 (Protein phosphatase 2C)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X8L7" /db_xref="InterPro:IPR000222" /db_xref="InterPro:IPR001932" /db_xref="InterPro:IPR015655" /db_xref="InterPro:IPR036457" /db_xref="UniProtKB/TrEMBL:A8X8L7" /protein_id="CAP28978.3" /translation="MMVSHADLPIASSTEQKAHGRLKSKTFAPENRQKAATITSLSIF GTPSDQECQPIPVVPRSSSNDELRVWRVTSAGLVEVDAKTMGAFLDKPKTDKTNVHGE GNGIKYGMSSMQGWRICMEDSHIAEAIMSQSSPYKDWSFFAVFDGHAGHHIANRASSQ LLEHLITSDEFRQMTKALEENNGTLTDSTLKLLETGIKKGFLSFDEISKSSEINKSGC TAVCAIVTPTHIIIGNLGDSRAVVAGKNNVFGTEDHKPYLEKERKRIEDAGGSVMIQR INGSLAVSRAFGDYEYKDDPRLPADQQLVSPEPDVYIMKRNIENDEFMVVACDGIYDV MSNEELADFVRDRLVVHDDLREVCDDVLDECLTKGSRDNMTMVVVCFPAAPPVNVHRK EAEEAWVAQVKTVINQFLDDTVAGEDFKKEEDMVTLKSVLDKVTAKGLLPTDLRVPTH TVTTLAQKILTQRDIKHV" CDS join(560937..560999,561043..561173,561455..561625, 561673..561843,561896..562059,562105..562517, 562563..562649,562695..562868,562911..563044, 564323..564332,564335..564583,564589..564618, 564621..564719,564762..565205,565208..>565339) /gene="CBG09634" /locus_tag="CBG_09634" /standard_name="CBG09634" /product="Protein CBG09634" /note="contains similarity to Pfam domain PF00858 Amiloride-sensitive sodium channel contains similarity to Interpro domain IPR001873 (Na+ channel, amiloride-sensitive)" /note="Predicted" /db_xref="GOA:A8X8L6" /db_xref="InterPro:IPR001873" /db_xref="UniProtKB/TrEMBL:A8X8L6" /protein_id="CAP28977.1" /translation="MPRKRRSEDVDAMVTATSPIKIKVEQFIEETASMDVYIPALDRF AEDTSMLGFRYLHTRYKTWFRVLWGFVVVFFIGLTFYQVFERVNYYFIKNPLTTRRSY ETLSNMYFPTIGVCNKMQLKASSVASKNPDLLRGMCSVLDETTSNSTRFDELDKFDDV DILDLYRNSIQSVDDLFVSCEFGKSGSCQDEIRPMYTPYGLCYSVSPNKTILRPGPET TLSLVLNLEVHEIIPGTVVEPGVVLSIYDGASSLSHYSEGIHLEAGKVVTIPVNEVRK LRLHESSCGSTKMESFSEKEYSKAACEWSVSVKQIEKECGCIPIRNPIYRGVFDNKND QVDNSTEVPKKKYKKWKKRKIPRCTLRQEIECVQEKLNIRPHIDDTTCPDDCEDISFS SIVFGGKLSASEIVSMLPSDWEDTKEKRLTAYQKALEVIPNRMIPVVRNVQQLADELQ LFVKEASEIFGVSDKFNDVKCLSIDGRSYESFINQFYSYEPTWERITTLVFISYLKVL YFRYLQHSLARELNSTALCLGLALNDKGEIDDTVTPVVNMTLASIALLQLGQIEHSLG RVNFNYGLTMMHETTRRVVLELGFCFFYYRKMHIIAHPLITEVRDCVTKMYDNLERVE EIADDCRMIFKSHYQPLLEASNVHTKTNPSSDSFKTYTEYVKKVLSKLQVMKTRVRMN DWKDFNIDLKEFESLYREIAKDHVEIEEMLKLRKTMVTDIPKLASELSETFMAVTESR RKFAVLTGISADESFSEKFSNFSKCLEELSTKAPILKVRFLVKNNFDVRSLIQKSRFI RGEWLSRLRNQVLMAQSYSPTHQYDV" CDS complement(join(565717..566091,566166..566354, 566676..566945)) /gene="CBG09635" /locus_tag="CBG_09635" /standard_name="CBG09635" /product="Protein CBG09635" /note="contains similarity to Pfam domains PF02882 (Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain) , PF08659 (KR domain) , PF00106 (short chain dehydrogenase) contains similarity to Interpro domains IPR020904 (Short-chain dehydrogenase/reductase, conserved site), IPR013968 (Polyketide synthase, KR), IPR020631 (Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain), IPR003560 (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR)" /note="Predicted" /db_xref="GOA:A8X8L5" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR020904" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8X8L5" /protein_id="CAP28976.1" /translation="MPRFSGKTVIVTGSSNGIGRSAALIFAQEGAQVTITGRHAERLE ETKQQLLKAGVPTGNINSVVADVTEGSGQDQIISTTLSKFGKIDILVNNAGANLADGT SNTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHPGYPYY ACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVGTGFMAAMGLPEPASQKLYDFMGSR KECIPVGHCGRPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQAHDLMFILS Q" CDS complement(join(567370..567581,567629..567786, 567833..568032,568084..568230,568284..568380, 568679..568956)) /gene="Cbr-srd-34" /locus_tag="CBG_09636" /standard_name="CBG09636" /product="Protein CBR-SRD-34" /note="C. briggsae CBR-SRD-34 protein; contains similarity to Pfam domains PF10327 (Serpentine type 7TM GPCR chemoreceptor Sri) , PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd) , PF10326 (Serpentine type 7TM GPCR chemoreceptor Str) contains similarity to Interpro domains IPR019429 (7TM GPCR, serpentine chemoreceptor class i (Sri)), IPR019421 (7TM GPCR, serpentine receptor class d (Srd)), IPR019428 (7TM GPCR, serpentine receptor class r (Str))" /note="Predicted" /db_xref="GOA:A8X8L4" /db_xref="InterPro:IPR019421" /db_xref="UniProtKB/TrEMBL:A8X8L4" /protein_id="CAP28975.2" /translation="MSDNISLTVIQTNVSSSWNVYDKFLFFQTLNDIIIFPIYFYLYL CITLFSQISVLLLVIFKTPVLFKDFRIFLINSSSLQIAMCLVVVFTQVRILPNPNSTG YLFSGPCRFVHKNACFFGLDFFQLVFDASSFAIPATLYYKYSKVTNINGKDLSRNRVR LILVSSYFLSIIVGVIYVITYSPDESVEVSNETRKQFYREYDFSRYAEVTGYQTHFWS SLTNNLNMLSIYIPPVMSIVFIRFIQIKLNGLKHLFTDKTAAQAKKFDLALTIQTLVP AVCVIPVYTSHLVIERYQFWFMPDFEKILYIMLSLPTAIDAFIVIITITPYRNAFLLF FAGIFCYSKPTTPLPPSRRINNSVATSLF" CDS join(570071..570233,570346..570433,570943..571159, 571201..571314,571359..571490,571534..571749, 571796..571923,571969..572049,572095..572205, 572247..572397,572441..572698,572745..572860, 572909..572924) /gene="CBG09637" /locus_tag="CBG_09637" /standard_name="CBG09637" /product="Protein CBG09637" /note="contains similarity to Interpro domain IPR004245 (Protein of unknown function DUF229)" /note="Predicted" /db_xref="GOA:A8X8L3" /db_xref="InterPro:IPR004245" /db_xref="UniProtKB/TrEMBL:A8X8L3" /protein_id="CAP28974.2" /translation="MSFRIKDFQHFFPSFIFLLIAFLIIVITVGITKNANFNPMVGPS YPFEYAYSMQDTRTLLANHCKFPFIFFANYDVEDGVYEIDPEDDCVPHELNEYVHLST KGVLTFRSKVETNSTLKSIRYANVTSGKIKDQSDFRCTYYKHSGVSERYFEVSVILPD VPVQIPHYNFAFSCKKDGIVEFVKPFVNFAAIPKEVPGESVAVIFLPSIHHLLFTKKM TRTKNLMKQNEFVFAQMMNMKQEKPFLDLLLQLGISSDMSVFQKATKQNFTTFFSGPQ QIRDLIDVDYDTTDHRKLISDYLIDENLCLEDGRKLMDDQLENIESFLESTSGFKFFS ALFLDDYGSQRSLIDYDLSEMISRLSQKGIFKSTTLIVTSYDSSVKEPMDLNSKNPLF AIRVSDNLRPSLPAEQYYFHLNSYRLLTTANSYNLIMNMLEPKTTLDLSPLTLQSTTG SCQTAGISEKMCLCMKSIATPTFPESIRDGYLEKLQKEFGEEIQKYKCVKSHEIQNVT EFFEYDDDRYEYYMIGGDLKPIFRGKLIVLELTGQASIIGMNQTQFDVPLKKTFVYDS VLKYFREFDYARMLIGPYGVTNIIPSICLL" CDS complement(join(573042..573212,573260..573391, 573445..573510)) /gene="CBG09638" /locus_tag="CBG_09638" /standard_name="CBG09638" /product="Protein CBG09638" /note="Predicted" /db_xref="GOA:A8X8L2" /db_xref="UniProtKB/TrEMBL:A8X8L2" /protein_id="CAP28973.1" /translation="METRLVIVLLFLVSIASAGLIQRRVKRQWGGWEGGPGGWQQPGW QQHNWNNNMNRNKIAAQQQQYNCQTSGINLIGLPISSYNCQNSGMSARVNTLQQSQQN QGMLQGPLGGIGGLLNNFMG" CDS join(578508..578633,578985..579112,579157..579508, 579557..579704,579878..580172,580221..580263) /gene="CBG09639" /locus_tag="CBG_09639" /standard_name="CBG09639" /product="Protein CBG09639" /note="contains similarity to Interpro domain IPR000615 (Bestrophin)" /note="Predicted" /db_xref="GOA:A8X8L1" /db_xref="InterPro:IPR000615" /db_xref="InterPro:IPR021134" /db_xref="UniProtKB/TrEMBL:A8X8L1" /protein_id="CAP28972.2" /translation="MTISYDEEFSSLMLRWRGSIWKAVLKDLIGFYIAYYIVLAFQWY LLDEKGKEYFTGWIMWCEIGAQYIPLSFLLGFFVSLIVARWWEQFNCISWPDKMMIMV SACLPGNENLVVRQTIARWSSLQAAIAWSGVSVKTLKRFPTERHMVASKLMTEEEYDL YMNTEAPHGKWFIPILWIVNLIKKQKQKGVIDSIQMDMLLKQVYSYRDGFAMLFVYDW IKIPLVYTQVVAIATYGYFFICLIGRQPKLDQRKLNYVLDRNTAIAHMMASELSDQLP SIGAPMVPAVPHTRASFKIQDVIPKSHLAGFKLSDAEMKLIKPEDLEEHERLLEETKV TNRQRLGTLVRAIEKKSRTNATINEDDEE" CDS join(580580..580720,580778..581248) /gene="Cbr-col-152" /locus_tag="CBG_09640" /standard_name="CBG09640" /product="Protein CBR-COL-152" /note="C. briggsae CBR-COL-152 protein; contains similarity to Pfam domain PF01484 Nematode cuticle collagen N-terminal domain contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal)" /note="Predicted" /db_xref="GOA:A8X8L0" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/TrEMBL:A8X8L0" /protein_id="CAP28971.2" /translation="MVSIHYFTGIYTISALVVVSSLICSTFILAEINEISEEVSHGMR AFNHYSSDAWTLMASEIGQSSIFNLNSKSRSPRSTEKKCNCNQPSNFPAGPPGPPGAA GIDGEDGTPGLEGKNGNQGMSITAPKDPYDTPSCTVCPQGPPGPPGPDGAPGPVGSDG SPGENGADGQPGASGEDGAQGGQGAAGEPGTDGEVGASGKNGQ" CDS join(582000..582019,582110..582708,582759..582991) /gene="CBG09641" /locus_tag="CBG_09641" /standard_name="CBG09641" /product="Protein CBG09641" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8K9" /protein_id="CAP28970.1" /translation="MDDIYFWSKHGRPSAEKDRIRNSIAELCLSHLKKEGTVLESIHV QSENDLKFKAEEHTDMAPYINYSLNKKRRWEAEDAIGVELLEKVQKWNEGWKVLLLER VNLRSWNFISWSYASDPERYLDRFMIKDVHELTKDDAYSHKGIDSVYGQRFSHFLEEN RKPKKENEEQSSEPSELLAAYNFLRAPKNYVALLQKEYKSINYGWDWPHVCYWRRVDQ QKDNLLELRYGEVEDLDGNDVNDVSEKDQSDGSSDQKKKSEFYNLEDHFVDKFVVVRR RRRKNTC" assembly_gap 583711..584500 /estimated_length=790 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(587575..587752,588226..588321,588378..588575, 588621..588835) /gene="Cbr-cat-4" /locus_tag="CBG_09642" /standard_name="CBG09642" /product="Protein CBR-CAT-4" /note="C. briggsae CBR-CAT-4 protein; contains similarity to Pfam domain PF01227 GTP cyclohydrolase I contains similarity to Interpro domains IPR001474 (GTP cyclohydrolase I), IPR020602 (GTP cyclohydrolase I/Nitrile oxidoreductase), IPR018234 (GTP cyclohydrolase I, conserved site)" /note="Predicted" /db_xref="GOA:A8X8K8" /db_xref="InterPro:IPR001474" /db_xref="InterPro:IPR018234" /db_xref="InterPro:IPR020602" /db_xref="UniProtKB/TrEMBL:A8X8K8" /protein_id="CAP28969.1" /translation="MSRIENESGFLSSDAASVGSEDDLKVDLKSDVKKTNGVNPKEDH LKSMRNAYESIIQHVGEDIHRQGLLKTPERAAKAMMAFTKGYDDQLDELLNEAVFDED HDEMVIVKDIEMFSLCEHHLVPFMGKVHIGYIPNKKVLGLSKLARIVEMFSRRLQVQE RLTKQIATAMVQAVQPSGVAVVIEASHMCMVMRGVQKINASTTTSCMLGVFRDDPKTR EEFLNLINKR" CDS complement(join(589213..589315,589365..589770, 589795..590009,590059..591641,591690..591842, 593142..593243,593291..593471,597998..598222, 598276..598475)) /gene="Cbr-vps-54" /locus_tag="CBG_09643" /standard_name="CBG09643" /product="Protein CBR-VPS-54" /note="C. briggsae CBR-VPS-54 protein; contains similarity to Pfam domains PF10475 (Protein of unknown function N-terminal domain (DUF2450)) , PF07928 (Vps54-like protein) contains similarity to Interpro domains IPR019515 (Vacuolar protein sorting-associated protein 54), IPR012501 (Vps54-like), IPR000923 (Blue (type 1) copper domain)" /note="Predicted" /db_xref="GOA:Q61JT8" /db_xref="InterPro:IPR012501" /db_xref="InterPro:IPR019515" /db_xref="InterPro:IPR039745" /db_xref="UniProtKB/Swiss-Prot:Q61JT8" /protein_id="CAP28967.1" /translation="MKAMEERTVGLISASSSRASLKTQLENGYPRICDYCEPTIEFLS SSELARHIRQDHTTQEGGSFLCRYGEHGVCQKLPLEGVCDVDFEAHIRRCHTSQSVPY SRSTSCFTEDNEEAASLRSIRLTSDRDTPTIEKKKFTLHSFTQNLSAVLADPSRSRND LSTFFTRHWGDTFVPTQPVPTSKRLAKMADASFDSYCQAAGESYKRYQAVKRALRLSH TEGTESGNERQDAEDLPTVFIDPRFTLGDSSTFSAVFTVPANENLDALKQTLSGKNVI PATPLEVAINKKPGEFRDYEALQNRLEMMHDVVDGRLAGKLVAKTDDFWQVVRSYSGL QEQLANALQCVMVVRKNLKHVDELVCDQTKKIIEVHQKYEQKKHLLAKLNDIACLREA QSTVQMMLSQGDYPKAIECIETSLDVLSKELNGVTCFRHLSSQLRELYSVIGRMMNED FTSLIQKEFGVKPEAGTLIQAEGELSAVLLGLMRMRKYTFISVLREEIIEGVKSVMRH VIKSQILNSGVDLSDFDPSLTQLGEPVRRMKHADFLKTVRAVMDEEYFFCKRLEALQD ILLETAQRAHPSNRHGSEDIIIERLEEAKLNESDSDDETGSFSKSTSSGGFVSGSAVN SNATATTLLSIEVRSEAFLKRVLPLIAEFGHQCAQQRISRLLIARAKNASVTEATTPT QLSECIAIVKEYQSQCEEEGWYSTQNQKAGGLGRAINKLSMDYIEKFHAARKMRIGNM LDTELWKATDVSIIDQNMVDQAIETGMLRSSKRIDDGPTKKPFKRTGSSATIDSGTSV SNQTGIIVDEESFVVVGSSITMIQILADYCEAISKMPTFAQDWNSRVIELLKTFNSRC CQLILGAGALQLVGLKTISVRNLGTIFVNLTLAGRSLELVCRFIPMVHDEMDRVLPDD RKSLLRYFKGVESEYRDHVNEIAIKLISVIAHYTTNCLGMWDVKGNIPSPEFQQICRH MLKFHNGLTGIMPRDQIESLFRQVHENFKANLREHVTGMGIRPHDTLKYGYVTQDYMY YQQNVKNMESCRNLELESLNDIMFD" CDS join(595499..595690,595784..596521,596567..596820, 596869..597127,597169..597252,597482..597646, 597727..597780) /gene="CBG09644" /locus_tag="CBG_09644" /standard_name="CBG09644" /product="Protein CBG09644" /note="contains similarity to Pfam domain PF00858 Amiloride-sensitive sodium channel contains similarity to Interpro domain IPR001873 (Na+ channel, amiloride-sensitive)" /note="Predicted" /db_xref="GOA:A8X8K7" /db_xref="InterPro:IPR001873" /db_xref="UniProtKB/TrEMBL:A8X8K7" /protein_id="CAP28968.2" /translation="MGAKVKDQTSVEMHDVNEPRHAHPEDDKPSSWKDALFGRRARKY AFIFIVAFLAVLTVKDVFDLFEEYFEYPKESDINIVFNESMTMPNVTFCMSRAQAWSH FKLNLSAPADEWDAVVDESLANMTDHDAFMKQPWDYRLVMEAYDMIATYSSLERETTA HGSARSIHVFKNSPRLAAKRKTFKKWRDILDSRRITFDEFTQKTGIEVLRRSMQRFRR RTFDDDDTVIKTKLRISWISQMQICYQPEFDKDNFKTIDDQGVFFDMLLSHNAENTEG QKIDCMSVDFHGRPSSLNRFMEGKGRSRDGFIDELCLGQRHEVTAHVTALYQMLENDE EGTRCRDVEDGEDSEFNCRSRCRMEMIRDACHCTPLSLSYLAKKEDMEIFPLCDYTQC TVDVQKGNYSDTECANKCFPDCRQIRFEVDHSVKGRMLRPDLTLVELSWGPFEYLTME QQWKYTPTTFIAALGGSIGMWLGLSILSLIQLVTYSYTYFTKKIVNEKILKKGNTFDR RDGEDEDGDFTIDNGTERKKMSLAENPFAEFFPGGSPEQPKKGGSKPNSRQASLDKEG GNSQGYSANPKGTRS" CDS complement(join(599094..599193,599428..599556, 599609..599883,599932..600062,600123..600302, 600350..600413)) /gene="Cbr-mics-1" /locus_tag="CBG_09645" /standard_name="CBG09645" /product="Protein CBR-MICS-1" /note="C. briggsae CBR-MICS-1 protein; contains similarity to Pfam domain PF00595 PDZ domain (Also known as DHR or GLGF) contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF)" /note="Predicted" /db_xref="GOA:A8X8K5" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR036034" /db_xref="UniProtKB/TrEMBL:A8X8K5" /protein_id="CAP28966.1" /translation="MMVSPPQEDVVLNADSEPVFEHGATLVSSPFHADAEHTFDISFA AEVTDDMTFDDTTTTSRNHDSIPEEALKMVEIQKTNHGFGFNIVGGTDNPHFPGDIGI YVSSVNSESKSYGVVRTGDKILSFDGIDMTSKTHDEAVDVFRSVETGHVAKMLIDREY LYLQEDRTQTPTASAILSPQVTPQTNGVRNTDTPKSMTNSESKGRLTSHGISAVIERI RGKVYDEEDAQSVTSYAPSTHSIIDDVPRTPRKPLSILDPRNNSWITEALYVSIGLGA LTLSGYLVYRFIRSRK" CDS complement(join(600689..600778,600823..600953, 601000..601090)) /gene="CBG09646" /locus_tag="CBG_09646" /standard_name="CBG09646" /product="Protein CBG09646" /note="contains similarity to Interpro domain IPR000781 (Enhancer of rudimentary)" /note="Predicted" /db_xref="GOA:A8X8K4" /db_xref="InterPro:IPR000781" /db_xref="InterPro:IPR035912" /db_xref="UniProtKB/TrEMBL:A8X8K4" /protein_id="CAP28965.1" /translation="MSHTILLLQPTDNIESRSWSDYESTNDCLDGICKVYEEYLKKKT PTKPTITYDISNLFEFIDDLKDLSMLVLDSETYTYVPHNKQFVKESIYKLMDTRLNKQ Q" CDS join(602457..602527,603088..603220,603267..603458) /gene="Cbr-lpd-9" /locus_tag="CBG_09647" /standard_name="CBG09647" /product="Protein CBR-LPD-9" /note="C. briggsae CBR-LPD-9 protein ;" /note="Predicted" /db_xref="GOA:A8X8K3" /db_xref="UniProtKB/TrEMBL:A8X8K3" /protein_id="CAP28964.1" /translation="MSGLSQAGRQVARIAVRQVSSHSHDSQAVWKEINRLGSEGKWDN VNNMPKMFLFGNAKQEATSAYRAINKDPDFFRQSPYGQYLKIVWRLALLFGIIKAGTV VYDFAIPEEQRLKYKYRNHGHHGHDEAHH" CDS join(606676..606776,607080..607164,607209..607600, 607642..607798,607880..608365,608413..608552, 608602..608841,608888..609107,609150..609482, 609512..609992,610044..610452,610497..610632, 610681..611226) /gene="CBG09648" /locus_tag="CBG_09648" /standard_name="CBG09648" /product="Protein CBG09648" /note="contains similarity to Pfam domains PF00391 (PEP-utilising enzyme, mobile domain) , PF01326 (Pyruvate phosphate dikinase, PEP/pyruvate binding domain) contains similarity to Interpro domains IPR008279 (PEP-utilising enzyme, mobile domain), IPR002192 (Pyruvate phosphate dikinase, PEP/pyruvate-binding)" /note="Predicted" /db_xref="GOA:A8X8K2" /db_xref="InterPro:IPR002192" /db_xref="InterPro:IPR008279" /db_xref="InterPro:IPR013815" /db_xref="InterPro:IPR036637" /db_xref="UniProtKB/TrEMBL:A8X8K2" /protein_id="CAP28963.2" /translation="MLILLLLIFISAPLCRYILYPVVYAFLKWRRPVRKFTAPTAKIR DILNPDKDEWNMEEIKNEEIITISGSGEDDSFVYIQIITKNGIHSSHIRIFENGTLYS GSFDAYFAENRTIICGPLIIELRNPFRKWRINFRGYLKDNDGNSHFIILSGWWRCVTN ARFFYSNAPLKSFTDVYHEKPLELAENLKTIEKYRTGNVFHQMGEYHAEIKIGNGEVV EHRYRGLRHRNPLNLETTSTQFHTYLSDGNAISHRVNSLEHQKLVSHAIIFRADHSVR AVTLHNSHSLESDNMMPVRFNYSSGKFLPFEMRKGQKLSHFNYIREDRKVVDVTALKV NSAIFTGIGFVVRIREALHTTPAKTLDCFPEYHATDSEKVRQVLPFGHRACQDKLLTG GKGANLARLQAITNDFHVPPGIVVTTAAFNEHVRMNRNIAEAIKLLDQNDQSANYYEE TGKRIGELLIESEVSEELHNKIREWLPFSEYYAVRSSAVGEDGADLSSAGQLESYLDV FSHEISDKLKLCWASNFRREVLNYRKNYGQQLNPSMAVVIQEMNRNGVAGVMFTANPV KLDCGEIVINALKGSGEQIVSGVTTPDEIHVNRINKSVVINKIGTECCLNDFQIEKLS RVGEYLERIFGKPQDIEFVVRGDQVNIVQSRDITGLDKETSFEMYTEYNSPSIHDKEI LTNANVGEVLPAPVNAMEAHNLTGMFDKVICVSLDQCMTTQEINDVVPAHTTIGFSVA HRKIFFNLGEVVLRIWEMVEKDRITDIVIAGETLFSPEMFRQAAHQYGSVPSFFPLKR MYRMIKLIYFTSNSVKAKIAEIDKEAKLLVPTEDMSVEEVFKKYEELEKLWCDAIRCH TDLSMFSSFTYVLCGMLIRGSDTGPLSNDNISDFANVFSNNSRGDVVSADVPNSLKKL AKTIREDGLVKEFCDAEGNDSLKILENGRRSSQELQRFFDLHGHRGPKELYLDAATWE EDTDLLVHTIKSMLSFPEASDKTIENEDDIIDKLKCKPTGIRRRFLKYFIGQTHRGVA FRETAKNHLVSTTNSVRKTCRMIGKKLYQKGYLPDPNLWMHFSIDELKELNETRSAKL ISRAVRRKQIASKFEGLQFPLVAHGYMSPIKVEIAETDASVGLTLRGTTVCEGKVRAN ARVAKTLEEAKETIPGEILITRYTDICWSPFFPMISGIVTEIGGLLSHGAVVAREYGL PSLIAVTNATQHFKTGDFVELDSINGTIIRLDQNHND" CDS complement(join(612977..613060,613107..613235, 613285..613473,613518..613655,613703..613936, 613986..614129)) /gene="Cbr-srg-32" /locus_tag="CBG_09649" /standard_name="CBG09649" /product="Protein CBR-SRG-32" /note="C. briggsae CBR-SRG-32 protein; contains similarity to Pfam domains PF10323 (Serpentine type 7TM GPCR chemoreceptor Srv) , PF02118 (Srg family chemoreceptor) contains similarity to Interpro domains IPR019426 (7TM GPCR, serpentine receptor class v (Srv)), IPR000609 (7TM GPCR, serpentine receptor class g (Srg))" /note="Predicted" /db_xref="GOA:A8X8K1" /db_xref="InterPro:IPR000609" /db_xref="InterPro:IPR040298" /db_xref="UniProtKB/TrEMBL:A8X8K1" /protein_id="CAP28962.1" /translation="MLTVQFLITTAYGAASFYLYTLIVYMMIKRWSEYNTTFFKLFII EYCFNVVTFLNSFITLRAPQNTCKDCIFSFLFDRNSSPNEDNSPLQYFFTLHYAMAYI QYSMTFLVALNRLSMVLLVNSYEKFWRPALPVFICLVIAYPFLVTLPISSNNAYYIYV PGLLAYTTKSVTDVTEVLSNLKNFMIGITVLTTIANILALIRLKCLHSRISGAERNLF TVSFVSLIIQLLALADTLVLFLSSADTTSVGTQTAKVLMPFVSDLLTLNHPWTLMYFS TKVRVSMANDHFPSMRNRVKDANTPSSVY" CDS complement(join(614666..614809,614853..614980, 615023..615194)) /gene="Cbr-ttr-23" /locus_tag="CBG_09650" /standard_name="CBG09650" /product="Protein CBR-TTR-23" /note="C. briggsae CBR-TTR-23 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)" /note="Predicted" /db_xref="GOA:A8X8K0" /db_xref="InterPro:IPR001534" /db_xref="InterPro:IPR038479" /db_xref="UniProtKB/TrEMBL:A8X8K0" /protein_id="CAP28961.1" /translation="MNSQFVISLGCFFALLVPAGGLFNFIGTDQYVVVTGRFFCEGMP ASDVLVKLYEDGTIYDTKLDSTRTYPDGTFRVAGQYTKIFDMDPKINIYHSCNHYGLC DKKITIEIPHEAISDRFGYDMDNSFDIGTLNLADGFSGESSDCIH" CDS complement(join(615904..616142,616190..616370, 616422..616910,617068..617251,617320..617384)) /gene="CBG09651" /locus_tag="CBG_09651" /standard_name="CBG09651" /product="Protein CBG09651" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8J9" /protein_id="CAP28960.1" /translation="MVYLSLFLSTLFISLTFGCFCPSLISPSCGCGGGGYNSYAGGGY GGGYQGAYSGGAMPGQAVFYRDLTPFRQPYYPQQPSYPQQYYPQGPSQPLPPMYQLPN PRYLQPQAPRPQPQYIPRPAPQPAPYRSAIVQEKQVYTQPAAPVAPLAETHKVTLHDN GYGEEVATTTYTPAIVTEAPAVDEVPDFDETPVKKEKEEFYYVYYDDKGKKVGDSRSG TTFAPENVIVEEETTVAPAPAPVHVEVTTERVEVNENYDDIVEETQVPARTSLAPSYT PEVVTSTTVIFEVRREGAPTVAPASNDNAEVIYEDETVEYEDDGHHEAAAPGSAPKKP QSGEFKRTVQDNQILVDAAETTGEGYRSRSVVSGVRIVKRFRHDERKIHSN" CDS complement(join(618928..619109,619156..619597, 619709..619765)) /gene="CBG09652" /locus_tag="CBG_09652" /standard_name="CBG09652" /product="Protein CBG09652" /note="Predicted" /db_xref="GOA:A8X8J8" /db_xref="UniProtKB/TrEMBL:A8X8J8" /protein_id="CAP28959.1" /translation="MPSIQFKSAASAKGGDAQKEVAIVEPTNPFFVPEEDEGYIIPKP QFRKNRFNIRILWIEKTNSQWKFSVFVMLLLTAYYSTCFLAEYDTSHHFDGLKKIPAF SEPVLTRVIMAEWLVLAFILIFGVLFFRRIVMPLYIYLAVMATNGTLALFVVKCKQFH LGIIQHDDIAFNLVGILLFTALIHNFVYMYALYLHLRLNWPGRYRASTNPSDVSPAQE KKDLGALP" CDS join(621769..621909,621955..622135,622180..622631) /gene="CBG09653" /locus_tag="CBG_09653" /standard_name="CBG09653" /product="Protein CBG09653" /note="Predicted" /db_xref="GOA:A8X8J7" /db_xref="UniProtKB/TrEMBL:A8X8J7" /protein_id="CAP28958.2" /translation="MSNPTSSSIPTNHTIFTTPASKKYSVCDAEHSYFYIPPCKSVVQ SEKPLTVFVERNAIDGLELEWIKHSPGAAALYVLIAIVTVSFYATCFLLQYGNYAPRS RNNVFDEAFLTRVVIVQWLVLLAILFSGVFLYRRLFMPLYIFLSVMATNGTLVLFVLK VKQLIDEKITISVFPLICLLSLFHFSVDISLNMLGLLLFCAVMHDIVYFYAMHLKLIE SRPFRAIDIQSNDTAVPNQYSTIHSSRSSLNKKEPSDIV" CDS join(623162..623237,623280..623380,623421..623528, 623577..623744,623791..624021,624069..624395, 624441..624597,624646..624848) /gene="Cbr-scpl-4" /locus_tag="CBG_09654" /standard_name="CBG09654" /product="Protein CBR-SCPL-4" /note="C. briggsae CBR-SCPL-4 protein; contains similarity to Pfam domain PF03031 NLI interacting factor-like phosphatase contains similarity to Interpro domain IPR004274 (NLI interacting factor)" /note="Predicted" /db_xref="GOA:Q61JS7" /db_xref="InterPro:IPR004274" /db_xref="InterPro:IPR023214" /db_xref="InterPro:IPR027111" /db_xref="InterPro:IPR036412" /db_xref="UniProtKB/Swiss-Prot:Q61JS7" /protein_id="CAP28957.3" /translation="MSLSKLSQKCFSRHHARTFIRFSSSDFQSLLGPPRVPNPYADSG RNKFAAPIVPINVNNHGNVFASIKVPINETPEAVAFKPEVEEAPRVEKVEVEATKIET EKVASSPAPATPPSAIDELNSLKDSLSKLEEAAASKTSAPSGSSGDNNDQPGNAEEVE ARRKRMERNTRIGGYVLLGGSVIGFISFCFYYGRAQRDEAGNVIADEFSGSFLAPFYR IANSFKLWKDYVVEPAREQLLPDPLPAPYLQPKYTIVIELKNILVHPEWTYKTGYRFL KRPALDYFLDVIGYPNFEVVIYSSESMMTAAPVVDSFDQKQRIMYKLFRDCTKYMNGH HVKDLSKLNRDLSKVIYIDFDAKSGQLNPENMLRVPEWRGNMDDTSLVDLAELLKTIH LSDAEDVRPMLQYYSQYDDPAKEFRRRAVYLAQQEEQKKQQPDDSSMLKRYSGRLFGF RRHASA" CDS join(626559..626564,627015..627269,627321..627673, 627718..627805,627854..628067,628117..628271) /gene="CBG09655" /locus_tag="CBG_09655" /standard_name="CBG09655" /product="Protein CBG09655" /note="contains similarity to Pfam domain PF04389 Peptidase family M28 contains similarity to Interpro domain IPR007484 (Peptidase M28)" /note="Predicted" /db_xref="GOA:A8X8J5" /db_xref="InterPro:IPR007484" /db_xref="InterPro:IPR037457" /db_xref="UniProtKB/TrEMBL:A8X8J5" /protein_id="CAP28956.2" /translation="MYVVRYNWKLIFILMALFVVLGILICTTSAWGQWRTNQRTHQLS LLPESSTLRLCRDFTNQTRFKEILAPLMVPRVVDTPQHRKVGDYLQEFLHNLGFATEW DAFTDTTPLGTRNFRNLIATFDENAPRRLVLACHYDSKIIPGQIMIAATDSAVPCAMM LDIAQTLAPYMYKRVAQQIGLQLIFFDGEEAFRDWTATDSLYGSRHLAQKWEQKWYPS SSSLNNFELSKEIDRIDVLMLLDLLGAANPSIGNTIGMGATELFSQLADVESNLRTSG CLSSLRRNVFNKQLSYNQVEDDHIPFLKRGVPILHLITVPFPSVWHRVSDNGNALHYP TIDHMTSVIRVFVAKYLGIAPA" CDS complement(join(628685..628867,630306..630384, 630431..630504,630551..631000,631043..631108, 631153..631260,631331..631525)) /gene="CBG09656" /locus_tag="CBG_09656" /standard_name="CBG09656" /product="Protein CBG09656" /note="contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10324 (Serpentine type 7TM GPCR chemoreceptor Srw) contains similarity to Interpro domains IPR019427 (7TM GPCR, serpentine receptor class w (Srw)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8X8J4" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8X8J4" /protein_id="CAP28955.2" /translation="MTSLASTIPPMASDLQVKNQMMADDEAEAGFHFDVYIYILPLIV IFGLSGNVISLVTIFHSRLRRVNANIYLIVLTTADSFFLIGILLVCFKVDWIGYEYCL VNSCSPIERYLAIAHPLAHMKYGHVDRAKIMFYWVPIPFVLQLFQFISLEPSNEERKC ALKEANYQIIAQAVDTILCYVIPCCIIVVLNILVALQVRKSQEHFMEDTKKNSSRRTG GSSSSSGTWTRILWVMPLVFVVLNTPFYVIMMIEIVFQIIYQSPPSEATRSDTFMGVY NTAHYMYYMNTAIDVIVYAFSSANFRKTAVIAWKRIICPGYAEKQKGKVLVTDQTSRI SYRMTSERSTVRFPNPPSRAGSPKLAATNAVSVPLLSTEVQGQVQESTAI" CDS join(648417..648679,649342..649469,650096..650171, 650988..651051,651113..651265) /gene="Cbr-mab-23" /locus_tag="CBG_09659" /standard_name="CBG09659" /product="Protein CBR-MAB-23" /note="C. briggsae CBR-MAB-23 protein; contains similarity to Pfam domain PF00751 DM DNA binding domain contains similarity to Interpro domain IPR001275 (DM DNA-binding)" /note="Predicted" /db_xref="GOA:A8X8J3" /db_xref="InterPro:IPR001275" /db_xref="InterPro:IPR036407" /db_xref="UniProtKB/TrEMBL:A8X8J3" /protein_id="CAP28954.2" /translation="MAAIHHHTSSSYSSSSSTLLLKANADWPSHCPLATPLLGPSTLA LFKFLNSIFEMPKEQYMCQLCANHGIFNQPKKGHKQKCPYRTCPCSLCALNTKRRHLD QIERQLKHTNEPMVAQAPVSMAKSPSQPECQLSPTMPKLTPNNPTSGRDTFRNSISNS TTFAIQLPATISKKEFKMLRRDDTTPLQNSLKRSYPKSIDDTMEPIKKEKPSIFHSAE MLAIGDSTQ" CDS join(655827..656015,658351..658631,658679..658856, 658968..659286,659334..659478,659588..659724, 659975..660057,660108..660268,660325..660374, 660422..660550,660797..660894) /gene="CBG09661" /locus_tag="CBG_09661" /standard_name="CBG09661" /product="Protein CBG09661" /note="contains similarity to Pfam domains PF02214 (K+ channel tetramerisation domain) , PF08016 (Polycystin cation channel) , PF07885 (Ion channel) , PF00520 (Ion transport protein) contains similarity to Interpro domains IPR005821 (Ion transport), IPR003971 (Potassium channel, voltage dependent, Kv9), IPR013122 (Polycystin cation channel, PKD1/PKD2), IPR003968 (Potassium channel, voltage dependent, Kv), IPR003131 (Potassium channel, voltage dependent, Kv, tetramerisation), IPR003091 (Voltage-dependent potassium channel), IPR013099 (Ion transport 2)" /note="Predicted" /db_xref="GOA:A8X8J1" /db_xref="InterPro:IPR003131" /db_xref="InterPro:IPR003968" /db_xref="InterPro:IPR003971" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR027359" /db_xref="InterPro:IPR028325" /db_xref="UniProtKB/TrEMBL:A8X8J1" /protein_id="CAP28952.2" /translation="MLSYRLKRTCASQVRSRYHNYYRHSLSAPESFHIPGETTPSLAY LSTLNIENLAEYGIHEPHYRIQAEENAAAQAASMERRVAFRPPPIGESRTTTITHDSG NAYQTKSIKTIFTGTNADTYMRLNVGGKSYYVRAELYTAEWTRMHELLDSSHEDRLRM VDGFDSKTGEYYLERNTKLTDHVMDFFVTGSLHKPQNVCVERFKEELEYWKIKPDQLS SCCQIPNEHHHHSRKLSHGTSFNEDDYVADFDGACFAGPRLAMWRFLEDPQSSLFAAI FALLSVFFVFASVVGLILGSMPEFQADSSNAAAYHVMHVKSRPNDLGNKFGNNDEVAP NELLKDFVYKPTDSPNLPLTILEYICIGWFTFEYLVRFFIYPRKRQFVKKTLNIIDLS TILPFYLEICLPLFGVESRLKEFTGAMLVVRVLRVLRMARVFKLARYSTSLQTFGHTL QSSITELSMLSMFLITGIVFFSTIMYYLEKDEPHTDFYSIPAGCWWCVVTMATVGYGD AKPVTTLGKLVATSTSICGIIVLAFPISMIVEKFATAQQRAIEDQQIQQAQMSAVANN ALLRRFPTRRKVRRNTTVSVNNI" CDS complement(join(660976..661053,661100..661186, 661641..661783,661837..662055,662100..662228, 662273..662380,662432..662555)) /gene="CBG09662" /locus_tag="CBG_09662" /standard_name="CBG09662" /product="Protein CBG09662" /note="Predicted" /db_xref="GOA:A8X8J0" /db_xref="UniProtKB/TrEMBL:A8X8J0" /protein_id="CAP28951.2" /translation="MERFFYCYGASGRLEVRSVVFEKYINSTNDCVLSQKQILPNKYL FKDKIVRVIEFPAYIENCGNASARSENIRDLVQEAEIVADLKIAMCYDHILNKEDCKN MKFLGLEMIPVGHETLFYETLEKYIDNLPSIYVNITTESGNLISKYKYFSSVSNNFVL WPSFFAILTVILFFFGSVFLCCCGLGLFALVEEDFQKRNEERDWLALQVRRNEDREVY AVSPALSQNGCLATAISKHSTSNLETAKSNTSSSKSSSSSDVVTDSTQPTETISGTTR TARSKIETNLETAKSSNSN" CDS join(666766..666847,666895..667121,667218..667295, 667340..667644,667694..667730) /gene="Cbr-aqp-6" /locus_tag="CBG_09664" /standard_name="CBG09664" /product="Protein CBR-AQP-6" /note="C. briggsae CBR-AQP-6 protein; contains similarity to Pfam domain PF00230 Major intrinsic protein contains similarity to Interpro domains IPR000425 (Major intrinsic protein), IPR022357 (Major intrinsic protein, conserved site)" /note="Predicted" /db_xref="GOA:A8X8I9" /db_xref="InterPro:IPR000425" /db_xref="InterPro:IPR022357" /db_xref="InterPro:IPR023271" /db_xref="InterPro:IPR034294" /db_xref="UniProtKB/TrEMBL:A8X8I9" /protein_id="CAP28950.1" /translation="MIEDEKDYSIYSKCAAEFIAVLLFVYIGSMQAAGGGDGVLHAAF AHGVAIFVLAATFGGVSGAHINPAVTFGIALVGRISPIHAVCYIASQLLGSVFGALLV RISLHYKAYFVIGAGATLCGRGVGWQEGLTAEIVTTYILVQTVLLCAVDTDKNRLAPL AIGFSLIIEILAAGAISGASMNPARSFGPNIMGQFFLKPENLNSLYMFWNYHWIYYVG PVIGAFIAAGVYRLFFARDYRVLA" CDS complement(join(667907..668189,668233..668452, 668506..668633,668678..668910,668958..669105, 669139..669623,669973..670198,670244..670466, 670515..670651,670696..670928,670973..671112, 671157..671266,671433..671830)) /gene="CBG09665" /locus_tag="CBG_09665" /standard_name="CBG09665" /product="Protein CBG09665" /note="contains similarity to Pfam domains PF04101 (Glycosyltransferase family 28 C-terminal domain) (2), PF00201 (UDP-glucoronosyl and UDP-glucosyl transferase) (2)contains similarity to Interpro domains IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase), IPR007235 (Glycosyl transferase, family 28, C-terminal)" /note="Predicted" /db_xref="GOA:A8X8I8" /db_xref="InterPro:IPR002213" /db_xref="UniProtKB/TrEMBL:A8X8I8" /protein_id="CAP28949.2" /translation="MTIKMVRKDNIKVQKVIELIEMHLNLLFFSILSSFPVFTFSYNY LVFCPLFAHSHHKFLAKIADTLTDAGHNVTFLAPIIVKEYEHIKYLETTKDIIYIQPD ENLKQIGDSADYASFWKDDFGMFSMLPAIENNSRVSGHQDNIPILLDDSYDGTEQINR EPVSPSFLPISVSPFGDQMTFKERLLNTLGDFTFTHIFKPPVLKSLKYPYNDLDINEI QSKAPFVFFNSNPFLDFPRPTLTKTIAIGGISVNVTQMRLEKLSSEYDQIMSQRKKNV LISFGSMLRSCEMPDEYKNMIIRVVEQHPEATFIWKYESEDLDFAKNVKNLHFSKWVP QTALLADSRLSAFITHAGLGSVNELSYLGKPAILIPIFADQLRNAKMLARHNGSITLE RRDLGNFERLEKAVDSILNDESYQKYANRLAHQLESQPFSPHDLLVKYAEYGAKFGEL PSLDPYYRKMSFFSFYMIDIFLFLFFVLISIVSVLTFSITHSGHNVTFLAPIIVEGYE NIKYWKHTTDIIYIQPDEKLKELGKVIKSVEFTKYWTEELTVFSMISSIKLFQKMFFK IYENFKKDLRVLDSLKTRKFDAIIYEVFAFNAIGTKCFVMSITFENFSNSGISRYQNI VSSLFRHSQLFTEQFYWGAIFTSYTVRITGSLSPFGDKMTFEERLMNTLCSFIYGVLL RPPTMSSYKSPYHTIDLNEAESRAPFVFLNSNPYLDFPRPTLTKTVQIGGITVNRTQM KQEKLPLEFDKILEIRQKTVLISFGTIMLSKDTPEDYKINILKVIESFPNVTFIWKYE SDTFEKAKNLKKSIFIQMDSSNSDSRLHVFITHAGLGSVNELSYMGKPALLVPLYADQ LRNAKMERHKGAVLIDKKDLANFESLRNTFADVLNNQSYKKNAELLARQLELQPITPQ ELLLKHATFGVEFGELPSLDPYSRQMSFFTFFMIDVYLFLFCSFVVLFYILFVVVRFL FCWVFRQQKLKQKNI" CDS complement(join(674741..674858,674904..675615, 675663..675900,675942..676385,676431..676759, 676802..677630,679220..679339,679383..679943, 680154..680294,680338..680581,680630..680949, 680997..681095)) /gene="CBG09666" /locus_tag="CBG_09666" /standard_name="CBG09666" /product="Protein CBG09666" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00856 (SET domain) contains similarity to Interpro domains IPR001214 (SET domain), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8X8I7" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001214" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR011009" /db_xref="UniProtKB/TrEMBL:A8X8I7" /protein_id="CAP28948.2" /translation="MMSAEETMEALREFAPQADNMTQYLTSNVETSQPLPFDVDHGFA EYIKANCYDKRRSVVKNSVKEVESDELKQQISAHGEMIEKIKSDPELNSNYRFDAIYN EEKMRQICRVLAQRTMISQGRIVEISTCGEDRNIKVPESILDYQTIYFPPEKRIQIMK NITFNKKDVIPVYSDIAGETVESISIPNSLLFDYTDVNYFNQTAEHNLARAVKMAAED KNTIKCSCCSSDPDKKVIRCYENRNCPCFIMNEKLQKFQKPTNGNSPAKFTSFEPIHF TSTDRHFYQHMGFACSELCGCEAKCTNNVLMIPNKRLFPVEMFRSNEKLGFGVRSNVL IPAGTPVTEFVGEIIGEQIHMENVNWNNIEYAYQVTYGEDDVMKQLVDQATFSKNYKS LIKDLYASISYYLDPTVCGNYARMASHSCAANMELVRVFQKSLSPAHIHLVMVAVTDI FPGTPITIDYGNDYATRLENKCQCGTFACLNGPESREMKNASHAEFGDSQTVRTNADT LYREINVVNNTEYSLCRLGCTHPEFETLSLPEFTFGQSAYREIVDNQTSAKSEEVQKN IVKEVRFLCLDHQDEGFTGRVNMLFEKDVEESNHIHYVELISRDEGDDEEVILHHSWC YNSNCYINFNNTFLVDFRLRVSAFNGNGAVGRRLSKWYNARNLLSVSNDLSLKSVEWK DDKAVARLSPDSNSGIPACSYEIQYKNALSSEYTTVKFYLDHTNELLVRGLEFNQNYT VTYISDLIGELVSVDVSVPACSLMVTDVTMCAPPSVSSLHSRWNTSSGENDLEIDWNY FWVLDANTNRIDRSIRTSHFHITVHPLITPNNPNCEKYEPIRRDVDNLQRHVSFRISD AKCNYEVEAVVFDTKRRKSETKKMKIVRINEPSYMALLPATDVQTTIGLVVLLTCAII FFTLIILIILLKKRNQSRRRRRGETVCYAYVDEPSRKIVGVRQPGARFLPVENMNRDV EAGLAQRTVGCNIQNGPKVNMFQVLPQPPYGDSTSDHHYDYISEYQVESEMSDEVFEE DICISTPNTPYRIMDSPSFCLMAPIAPFEEFDDLPAYAFQTFRFGKPYERPGNPYCLM TTAMDVSRGNCFSLKYPRDYSEPTRRALRRELEILRILPLHPNIVHFNGVVIGRWENI PYQITGILMEECLGGTLHDYINSAGFVLRRQGMRTPDDVCLPIANESPNQSSGYNSFT SKGRQTPEQKTNQDKNSCQIVSSKFIGFAEQISSALEHLHFVRIIHSRVSSMSIFLSC DFTDPLEMPSEQIVKLGDFSNAFPNSNDASVLDPMLQPPEVMMGKKFETKGDIWQMGM CLVEMCTLGTPFAMQKHIPMSGVSEFDKLPSTRFIRDTAKKCLLKPRSRPEAANLRVN ISNYTG" CDS join(681702..681777,681823..681920,681973..682095, 682154..682330,682378..682564,682614..682834, 682879..683046) /gene="Cbr-tut-2" /locus_tag="CBG_09667" /standard_name="CBG09667" /product="Protein CBR-TUT-2" /note="C. briggsae CBR-TUT-2 protein; contains similarity to Pfam domain PF10288 Protein of unknown function (DUF2392) contains similarity to Interpro domain IPR019407 (Thiouridylase, cytoplasmic, subunit 2)" /note="Predicted" /db_xref="GOA:A8X8I6" /db_xref="InterPro:IPR014729" /db_xref="InterPro:IPR019407" /db_xref="UniProtKB/Swiss-Prot:A8X8I6" /protein_id="CAP28947.2" /translation="MNFNNFTSDLNGKTCVKCEKEAKFTGVDPKKAWYCQECFIQMVR NKFRSALSKKKIYKEADARDTLVVYDGSPSGTFLLNQIDDALKQITYKRLMVKPTVLV LVSESEEPEIQQVIKRVAEIKKNFLENVNWFIAHIAFCLYDEPSELKEFECNGIEKIT AYKYLLASCSVPTYKKELERMLKEKCLQKLAESLKVTKCMVTDDADDLGRLALDQLCL GRGGSLSSLVTVAEKRNDFMIIRPLCDLSKREISIYNYLCKIDDHYIQFSHTQSQEKS VQTLTDAFIRTLEDEKFYSTINTVLSTASKIHNTNGKDGSRCSMCYVEVAEFQCETCS AVRNSCSENLNIIFS" CDS complement(join(683234..683631,683682..684552, 684598..684774)) /gene="Cbr-sqv-4" /locus_tag="CBG_09668" /standard_name="CBG09668" /product="Protein CBR-SQV-4" /note="C. briggsae CBR-SQV-4 protein; contains similarity to Pfam domains PF00984 (UDP-glucose/GDP-mannose dehydrogenase family, central domain) , PF03720 (UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain) , PF03721 (UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain) contains similarity to Interpro domains IPR001732 (UDP-glucose/GDP-mannose dehydrogenase, N-terminal), IPR014027 (UDP-glucose/GDP-mannose dehydrogenase, C-terminal), IPR014026 (UDP-glucose/GDP-mannose dehydrogenase, dimerisation), IPR017476 (Nucleotide sugar dehydrogenase)" /note="Predicted" /db_xref="GOA:A8X8I5" /db_xref="InterPro:IPR001732" /db_xref="InterPro:IPR008927" /db_xref="InterPro:IPR014026" /db_xref="InterPro:IPR014027" /db_xref="InterPro:IPR017476" /db_xref="InterPro:IPR028356" /db_xref="InterPro:IPR036220" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8X8I5" /protein_id="CAP28946.1" /translation="MTDQVFGKVSKVVCVGAGYVGGPTCAMIAHKCPHVTVTVVDMNK DKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADLIFISVNTPTKMYG RGKGMAPDLKYVESVSRTIAQYAVGPKIVVEKSTVPVKAAESIGCILREAQKNNANLK FQVLSNPEFLAEGTAMKDLANPDRVLIGGESSTEGLQAVAELVRIYENWVPRERIITT NTWSSELSKLVANAFLAQRISSINSISAVCEATGAEISEVAHAVGFDTRIGNKFLKAS VGFGGSCFQKDVLSLVYLCESLNLPQVAEYWQGVINVNNWQRRRFADKIIAELFNTVT DKKIAIFGFAFKKNTGDTRESSAIHVMKHLMEEHAKLSVYDPKVQKSQMINDLAAVTS ADDVTRLVTVETDPYAAARGAHAIVVLTEWDEFVDLDYNKIHDNMQHPAAIFDGRLIL DQKALREIGFRTFAIGTAPDQAYNLFGTAGY" CDS join(690875..691057,691107..691169,691215..691353, 691397..691491,691763..691858,691901..692085, 692316..692557,692601..692858,692942..693211, 693273..693445,693491..693684,694072..694170, 694218..694284) /gene="Cbr-twk-12" /locus_tag="CBG_09670" /standard_name="CBG09670" /product="Protein CBR-TWK-12" /note="C. briggsae CBR-TWK-12 protein; contains similarity to Pfam domain PF07885 Ion channel contains similarity to Interpro domains IPR003280 (Two pore domain potassium channel), IPR013099 (Ion transport 2)" /note="Predicted" /db_xref="GOA:A8X8I4" /db_xref="InterPro:IPR003280" /db_xref="InterPro:IPR013099" /db_xref="UniProtKB/Swiss-Prot:A8X8I4" /protein_id="CAP28945.2" /translation="MTLFQKLQWFCQLIRLRAYYKFLLLIAYTLFGAWLFRFYELQAD IKRRAIYGNDTNLIRRQLAERWIEMHDDAVLRNNSVLRRRRAAEAVDWLLGELNLSDH MREFSEDTPWTWTGAMFYAGQLYTTIGYGYPTAKTDEGRICTVLYALFGIPCFLMYLK AIGKTLSKRLKKIYKRVRRSAFGKFLLPTRVTATKDGFEDPDASAEERKRKPFPIPIA IILLIIWICFSASMFCQWEKTWDFPSAVYFFIVSISTVGLGDMLFRTPDMMVFNFLLI LFGLALLSMCFELITDRIAKWKQKRFDEHIKKVQKMAFQVFEKDPFVEEAPPLGIRMA PNLMQIAATHVSEEKRGFFAELKDWFAGKVTDNVIQSKLEDTDDESDEDEALEEFESP QVATLTANDLVVCTNGGATRRVSKQSYAFSDVSNLSNSKIPPGNNYGQLLDRIKAMEK FKPKKGDLDSRMFAKFLENKKLAKILEQTELRELATVSCQTDLSGLVVQRRNPKGRHA RIGSCSSQSTMSTFLPRNNSHAPDEDSVMSITFGDLKFDYITEPLIDEYHLRESNHSI FDFDDDEVVRIPQKMLVSRPGMPPPPPSRPSQLASPLRALLEKEQKYDEDPEIQLTPR RLASLTDVQARKVKLGYDENLQHARLVCGLLPQDFDSPSTSTSTSMIDSGYDLSKRDA PVNIV" CDS join(696116..696333,697712..697803,698189..698281, 698713..698812,698869..699111,699162..699275, 699325..699535) /gene="Cbr-ceh-22" /locus_tag="CBG_09671" /standard_name="CBG09671" /product="Protein CBR-CEH-22" /note="C. briggsae CBR-CEH-22 protein; contains similarity to Pfam domain PF00046 Homeobox domain contains similarity to Interpro domains IPR020479 (Homeobox, eukaryotic), IPR017970 (Homeobox, conserved site), IPR001356 (Homeobox)" /note="Predicted" /db_xref="GOA:A8X8I3" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR017970" /db_xref="InterPro:IPR020479" /db_xref="UniProtKB/TrEMBL:A8X8I3" /protein_id="CAP28944.1" /translation="MFNVSALAGATPSIASVSSIASPSEQHGLSTSVGIGALNDATSR TGDGGAASSSASSASAAPQQQSQSALHNKLDTKWDTLNSGLPTDTNLQCTTWTDIPLL AGYSTAPSFSFDQCTYGSYDPSASYFASNGLAGPMYTLPPAESFQRSDNDMLNGNGSN GNKDDKNGIKLEDDEEIIDEMDEENDEEDDGTGKRKKRKRRVLFTKAQTYELERRFRT QKYLSAPEREALAMQIRLTPTQVKIWFQNHRYKTKKSHQDKPINQSSILSAMPNAFSS QTASTTFPTRTMPIPMLVRGDTTARSSDISSTSPYTVAFGSTNSGYLPTPSAYLPTAS GYFSNGPTNASSYMANPQWWPS" assembly_gap 698568..698577 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(706480..706534,706585..706716,707053..707283, 707375..707838,708285..708392) /gene="Cbr-gsp-1" /locus_tag="CBG_09676" /standard_name="CBG09676" /product="Protein CBR-GSP-1" /note="C. briggsae CBR-GSP-1 protein; contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase domain), IPR006186 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase)" /note="Predicted" /db_xref="GOA:Q61JR3" /db_xref="InterPro:IPR004843" /db_xref="InterPro:IPR006186" /db_xref="InterPro:IPR029052" /db_xref="InterPro:IPR031675" /db_xref="UniProtKB/Swiss-Prot:Q61JR3" /protein_id="CAP28943.1" /translation="MSNDGDLNIDNLITRLLEVRGCRPGKPVTMSEAEIRALCHKSRE IFLSQPILLELEAPLKICGDIHGQYNDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLE TICLLLAYKVKYPENFFLLRGNHECASINRIYGFYDECKRRFSIKLWKTFTDCFNCLP IAALIDEKIFCCHGGLSPDLQNMEQIRRVMRPTDVPDTGLLCDLLWSDPDKDVTGWGE NDRGVSFTFGPDVVAKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEF DNAGGMMSVDETLMCSFQILKPSEKKAKYQYQGMNSGRPAVGGGRPGTTAGKK" assembly_gap 709736..710163 /estimated_length=428 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(725089..725290,726768..727231,727280..727432) /gene="Cbr-pph-1" /locus_tag="CBG_09678" /standard_name="CBG09678" /product="Protein CBR-PPH-1" /note="C. briggsae CBR-PPH-1 protein; contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase domain), IPR006186 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase)" /note="Predicted" /db_xref="GOA:A8X8I1" /db_xref="InterPro:IPR004843" /db_xref="InterPro:IPR006186" /db_xref="InterPro:IPR029052" /db_xref="InterPro:IPR031675" /db_xref="InterPro:IPR037981" /db_xref="UniProtKB/TrEMBL:A8X8I1" /protein_id="CAP28942.2" /translation="MMRRKNSSSSFGELNIDQLISTLVSVKPWHKTLDVTENEIRMVC VLARQIFMHQPMLLELEPPLKIGGKRRYSVKLWKCFQDVFNCMPVAALIDNKIFCCHG GLSPNLRSLDQLKRLSRPCDVQETGLLCDVLWSDPDATVVGWAPNERGVSYVFGVDVL AQFLQKMDLDIVVRGHQVVEDGYEFFGRRGLVTVFSAPNYCGEFDNAGAVMNVDENLL CSFQILKPQSQLVMDAALAEKQNNFVANLAGMANIKIEQKPQPMIQKRFRRGML" CDS complement(join(735344..735450,735540..735730, 735784..737115,737316..737461)) /gene="CBG09680" /locus_tag="CBG_09680" /standard_name="CBG09680" /product="Protein CBG09680" /note="contains similarity to Pfam domain PF00646 F-box domain contains similarity to Interpro domain IPR001810 (F-box domain, cyclin-like)" /note="Predicted" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR036047" /db_xref="UniProtKB/TrEMBL:A8X8I0" /protein_id="CAP28941.2" /translation="MFIFRNSPDQAQLALDEMNQKNSRKTSTRKVPAQITDLPDRALG IIFANCSSTDMTRCSLVNRKFREFIEDLEDERSESLRSSQKAKIFICDRKRAILEGVS TITPTRLARTPKNSECSDAGSTSYSSIASTSSSGAGSLGSSSKTKTRKQQAEQKQDLR RRNISDRTKSTTTSDDSSGFHSKATAFISDQYSDPINPHWAFDFDFAPWLQEYDVTEV FFKNFCSFLEREKIEDPMSPSSYKGRTAFYENHNRDNANAASLAECQITDLSDDSVKE LKSQSAGRIERLVERLANIRNAHFTFKDSICYGARPPATIFYFLSLMRENLRAITFDH VQSATKIELHKVLTLENINKLTVNQPQERQSIFVNEELFKDWMKLADPVRKVISVHLI GCQEFRPQNLYVVVQEWLKLEKPVEFKQISIDGGPYKYNDFMDLIERLHDVIEQAPPR SPTNRSFGKSPNEHTVVLERTCQIPHPKDRRFVITFKYCKLSRKMVLAIEKHNSPVPR TTLSPVPALTRLIRPQSAASVISSPVRKLSASLKSGSPIPTNNSSGRQLGRPLSHDPL LMTGCRENAGSNVFTRIVSFLGTSS" CDS complement(join(755506..755907,755953..756084, 756134..756283,756327..756779,756829..757621, 757663..757770,757814..757887,757940..758011)) /gene="Cbr-mre-11" /locus_tag="CBG_09687" /standard_name="CBG09687" /product="Protein CBR-MRE-11" /note="C. briggsae CBR-MRE-11 protein; contains similarity to Pfam domains PF04152 (Mre11 DNA-binding presumed domain) , PF00149 (Calcineurin-like phosphoesterase) contains similarity to Interpro domains IPR007281 (Mre11, DNA-binding), IPR003701 (DNA repair exonuclease), IPR004843 (Metallophosphoesterase domain)" /note="Predicted" /db_xref="GOA:A8X8H9" /db_xref="InterPro:IPR003701" /db_xref="InterPro:IPR004843" /db_xref="InterPro:IPR007281" /db_xref="InterPro:IPR029052" /db_xref="InterPro:IPR038487" /db_xref="InterPro:IPR041796" /db_xref="UniProtKB/TrEMBL:A8X8H9" /protein_id="CAP28940.2" /translation="MCGSDDSFEEFVAESQEPTSSRRRVHSTNDSEVPCSQRPDAAHD TMVENLEDEDLPVRDEPDDVIKILVAPTFIVATERTNQSCNHMDAVNTFEEVLQIATE QHVDMILLGGDLFHENNPSREVQHRVTQLLRQYCLNEKPIALEFLSDASVNFNQSVFG HVNYYDQNLNVGLPIFTIHGNHDDLSGKGLTALDLLHEAGLINLFGKHSTIEEFIISP ILLRKGETRLALYGLGSQRDDRLVRAFKEENITFLRPNAGAEDWFNLFVLHQNRPRRA VHRSTGNFLPETLIPQFFDLLIWGHEHECKPDPQYVASSEAVGDGFYILQPGSTVATS LTAEEALQKNAFVIKIKGRKFASKPIPLKTVRQMVCDELLLDKIPPGSRPVTKSERPK TRDGRYIDEIAIEVKLKEMIAKATENRGPRQPELPLIRLKVIYDGDWLHVTPANAKRI GLRYENIVANAVDMVSIKKNEPKTKRRKETEGNDVPEDFGNVSVANLQSIINDYFTQK PLDEQMTVLKPFGIGKALDQYSEIEEGGTAAAANRNFDASLMNQINVVRSMLKKMPLP PIDDSSDLNGFHDLIVKDLFDMKRTESEKSGNPISAPGMEEDEDNDSQFYIQPQSSVT NFNDGDDDDQFMDSDEDPIIANSRSSKPSTSRGRGRGSRGNTVRGSTRGKAAKSTSRP NPDSDDDGFIVINDSPSPPPASRTARGRGRGKTTTTSKKRDISFF" CDS join(760041..760712,760758..761218,761267..761375, 761424..761612) /gene="Cbr-wdr-5.3" /locus_tag="CBG_09688" /standard_name="CBG09688" /product="Protein CBR-WDR-5.3" /note="C. briggsae CBR-WDR-5.3 protein; contains similarity to Pfam domains PF08662 (Eukaryotic translation initiation factor eIF2A) , PF00400 (WD domain, G-beta repeat) (7)contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR013979 (Translation initiation factor 2A, beta propellor-like domain), IPR001680 (WD40 repeat), IPR020472 (G-protein beta WD-40 repeat)" /note="Predicted" /db_xref="GOA:A8X8H8" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR020472" /db_xref="InterPro:IPR036322" /db_xref="InterPro:IPR037866" /db_xref="UniProtKB/TrEMBL:A8X8H8" /protein_id="CAP28939.2" /translation="MEPSQSPHGLQTISQPLAPEDNQPLGLGDIRCSTPQSQYEQVRT VRTFLVINRAKQVTALGNTKLASGYQQFAFGLQQSQQSQFGAQKNKSRGPISSLGAVR ATHGAYKSSRKLPRAVAPAAEETSSSPPVVDVEEPTQSSDSQENLITMATISENTVFP PPHQPCSKPDDNRDCNYQRIATLSGHKKSISVVKFSPCGGYLATASADRSIKLWSMKD LTCERTILGHQLGINDISWNSSSQYIASGSDDMTVRIFSVSSGHCWRIMKGHTHYVFS CAFNPQTSLVVSGGYDETVRLWNVITGMCVRLIPAHTDPVTCVAFNHDGSCVASSSYE GCIRVWDVSNGHCLKTLKDLEHDAVSFVEFTPNGKFILSSHMNSKIKMWDVSKEKPVK YYSGHQNSKYCIFAGISLSHGRRVISGSEDGKIFVWDLQTKRVIQVMEEHTKPVLATD AHPILNMMASGGIEPDNTVRIWYSDK" CDS complement(join(761961..762098,762141..762250, 762298..762649,762700..762762,763070..763155, 763203..763230)) /gene="CBG09689" /locus_tag="CBG_09689" /standard_name="CBG09689" /product="Protein CBG09689" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8H7" /protein_id="CAP28938.2" /translation="MTAAQDKSRVYEALKLDADIALPPILPLFVPKFNLTIERAQEIV DQMQVMPLPPTPPPEPTKQMPVDREFIDLLHELRPTPFLWPKPADYIMSEEDQKLWNA TRMREYRRKSNELIERSKEMLNGLKAQCTINTVILKNLLDKNTVEEEVKRKASQFLRI SQDSLMLIPEILQLFQQYWRHREKAAESHFEMKSLVYLEKVFKLMNDYEIRKANKARS RSLTQMMKKIKDATLKAEAYEFFMVSQPAPHYSHYLVIVG" assembly_gap 765415..765859 /estimated_length=445 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(766559..766595,766641..767068,767115..767288, 767337..767546) /gene="CBG09690" /locus_tag="CBG_09690" /standard_name="CBG09690" /product="Protein CBG09690" /note="contains similarity to Pfam domains PF08659 (KR domain) , PF00106 (short chain dehydrogenase) contains similarity to Interpro domains IPR020904 (Short-chain dehydrogenase/reductase, conserved site), IPR013968 (Polyketide synthase, KR), IPR003560 (2,3-dihydro-2, 3-dihydroxybenzoate dehydrogenase), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR)" /note="Predicted" /note="contains similarity to Pfam domains PF08659 (KR domain) , PF00106 (short chain dehydrogenase) contains similarity to Interpro domains IPR020904 (Short-chain dehydrogenase/reductase, conserved site), IPR013968 (Polyketide synthase, KR), IPR003560 (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR)" /db_xref="GOA:A8X8H6" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR020904" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8X8H6" /protein_id="CAP28937.1" /translation="MARFTDKVAIITGSSNGIGQATAVLFASEGAKVTITGRNAERLE VTKKLLLDAHIPDNHINVVVGDITQESVQEALIKTTLEKFGKIDILVNNAGAGIPDPQ GKTGVNQSMSTYHKTFELNVQSVLEMTQKARPHLAKSQGEIVNISSIGAGPAAQVANP YYSIAKAALDQYTRTAAIDLAPENIRVNSVSPGAVATGFSTVSRGLNEQKSKAMYEYL GSQKECIPRGFCAGPEDIAKVIAFLADRNASNYIIGQTIVADGGTSLILGAHAHGARM VEAIFK" CDS complement(join(768052..768462,768599..769005, 769050..769116)) /gene="CBG09691" /locus_tag="CBG_09691" /standard_name="CBG09691" /product="Protein CBG09691" /note="contains similarity to Pfam domain PF01764 Lipase (class 3) contains similarity to Interpro domain IPR002921 (Lipase, class 3)" /note="Predicted" /db_xref="GOA:A8X8H5" /db_xref="InterPro:IPR002921" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8X8H5" /protein_id="CAP28936.1" /translation="MLKLLTLFCVIYAAHGLVLPASILATYSDAFARTQMLALASAAY SSNPQHCLDSKFTNAQLKRQIYVKNCALVNNDVCSGYTAVLHNDKAIVISFRGTQGFF QLISEANKSIFESQMSWIAGGKVSKYFGDAFSKVWAAGMKDDFAALLTQNPGYEVWVS GHSLGGSLASLAASYVIGTKLVDGSRVKLVTYGEPRTGNKDYAHAHDAQLAYSYRVTH NRDVVPHVPNEDFEGYYHNKFEVYYRENMKSGAKYTICNGDEDNGCSDGLWITTSIDD HLHYFEKDISAWGDKGCN" CDS complement(join(769576..769587,769872..770075, 770125..770277,770331..770393)) /gene="CBG09692" /locus_tag="CBG_09692" /standard_name="CBG09692" /product="Protein CBG09692" /note="Predicted" /db_xref="GOA:A8X8H4" /db_xref="InterPro:IPR008166" /db_xref="UniProtKB/TrEMBL:A8X8H4" /protein_id="CAP28935.2" /translation="MFGKEPKWLHLVEMIEHYKLQGVSKFYFYDREIGLYDTFLLKYY ADKKEEVELIEIPPIYFDAVSQQLLAIADCHLRNRLFSNWTNFSDIDERMMMTEEKET LREFLQDSISDKNGAVMFAQRWIFKYEKLPQKFENYQQALP" CDS join(771672..771922,771965..772802) /gene="CBG09693" /locus_tag="CBG_09693" /standard_name="CBG09693" /product="Protein CBG09693" /note="contains similarity to Pfam domains PF10319 (Serpentine type 7TM GPCR chemoreceptor Srj) , PF10327 (Serpentine type 7TM GPCR chemoreceptor Sri) , PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) , PF10326 (Serpentine type 7TM GPCR chemoreceptor Str) contains similarity to Interpro domains IPR019423 (7TM GPCR, serpentine receptor class j (Srj)), IPR019429 (7TM GPCR, serpentine chemoreceptor class i (Sri)), IPR019422 (7TM GPCR, serpentine receptor class h (Srh)), IPR019428 (7TM GPCR, serpentine receptor class r (Str))" /note="Predicted" /db_xref="GOA:A8X8H3" /db_xref="InterPro:IPR019422" /db_xref="UniProtKB/TrEMBL:A8X8H3" /protein_id="CAP28934.2" /translation="MLFLDPIVWKGRNPTFEDYYQNFYLKNCRNETSFFEDPYNYAAI TSAIATAVFPIHILAFYCILFKTPKTMDGIKKDLIVLHCWTFYCDNALNVLLIGYIFA PVFCGVPLGALTHYGVPVVIIGYLGQIGVSGVGTSLVILFETRYTAVSPNNIFNRFPI SKKLFLATNYIYTATFLIPAFYYWTPDDRQIEEKLNVLKVIPCPSPVFFEDQVVVGFP PDHTWIAFYCCSAFSFIIITQILFFVCNTIHRNHFKINLKLSIRTLKLQKRLFRSLCV QVVIPTVSLFIPAIYICFSIPFSYYDQTTNNILVLVFSSHGTLTSLCTILTYQPYRKV LFSFLTCGHTQKVIKRSVIVIHASIFFF" CDS complement(join(772887..773053,773104..773313, 773360..773488,773532..773630,773676..773999, 774045..774170,774276..774502,774550..774878)) /gene="CBG09694" /locus_tag="CBG_09694" /standard_name="CBG09694" /product="Protein CBG09694" /note="contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)" /note="Predicted" /db_xref="GOA:A8X8H2" /db_xref="InterPro:IPR000494" /db_xref="UniProtKB/TrEMBL:A8X8H2" /protein_id="CAP28933.2" /translation="MLKTFIILFILSQLAFGGYQDNTGNLHVECLNSPPPHPILSEFD EKIKEIIRTRANGDVSFLRRFVNADGIPQGLGNRDGFNDSYCYNITERLLAHSKYADC TKLQSLNGSVVDLNLWTGFDIFKFSVNLLELKNVDVEMTYRTELTYLYFSAFRKCDSR QLFFEIRLTENNFRLSIQFYEKSRSDRPKLLVRGNLRLKLSQGADRRKIEDLKKVCNK EMCEIQKNEECHFRHSIKNSDEYSNCRHVYGDMYFNSRFQESQPGTMDFRIDGCFVFN RTGIQFLRPIMRAFSNCSRSHLFFKNKYMCTDQLLELKDRWKSNNVNVTPADGMDVKC YQGECRGGFVSENVKDRYSGCEVIRGNVLVTEQSGNVSERVRDLSYAHVINGSLHLIN NTSLKKLTLPFLKEIYSTQCPALVIQNMSNLTDIIFHSHIEFNCNSTGPKVLIRNSPK LYLYHQTLEQMRKAGAILDDFNSETDTYSENSTFYLVGLCVLIVIFVEIAWALRKNLL FPNWIYRIFPMSIKRKLKQKQPRKKKEE" CDS join(776765..777199,777242..777335,777384..777483, 777528..777769,777821..778182) /gene="CBG09695" /locus_tag="CBG_09695" /standard_name="CBG09695" /product="Protein CBG09695" /note="contains similarity to Pfam domain PF00650 CRAL/TRIO domain contains similarity to Interpro domain IPR001251 (CRAL-TRIO domain)" /note="Predicted" /db_xref="InterPro:IPR001251" /db_xref="InterPro:IPR036273" /db_xref="InterPro:IPR036865" /db_xref="UniProtKB/TrEMBL:A8X8H1" /protein_id="CAP28932.1" /translation="MAPNAPSPMDIENMNDAAIEQVRQQVSDIIDPRYDTKWNMLRWL QSNDFNIPKTVHLLKKHLKWRKDRKLDEPESQSLLQFSDARRKHAPVDIIGPQRKEGG DRLVVVDRAGRIDVAGLMKAVQPTEYLHEMFRTFEEIQRRLMKMEAETGVQCFMHYIF DLEGLHFDPTLLGVVNGPFRVSWQLVGQHYREFIDKFIVINSPSYINVLWSALSSFIP EQSKQRIVFAGSSWKEELLEIVDQDCLPERYGGNIPDNDCLKIVEPIPKSTYWKLPVH YPSMEQLHKVSVSASKHRMLVYKVDKPDIELLMYSHNENDITITLYYSKEKETSENDL ELAVAPIPKCGLPAMDLFDYNCEFPGYYYVKLANEASWLLPSTYRMIVIEKETGKELE PINLNEKWIKKGQKAKKK" CDS complement(join(778480..778692,778869..778938, 778987..779202,779256..779358,779562..779680, 779724..779820,779868..780031,780132..780259)) /gene="Cbr-sre-6" /locus_tag="CBG_09696" /standard_name="CBG09696" /product="Protein CBR-SRE-6" /note="C. briggsae CBR-SRE-6 protein ;" /note="Predicted" /db_xref="GOA:A8X8H0" /db_xref="InterPro:IPR004151" /db_xref="UniProtKB/TrEMBL:A8X8H0" /protein_id="CAP28931.1" /translation="MNSTSLINYRFLTFINGSTVDFIGWRLPLQFIYSFEVFMLFTNF VEYIYTFYLLLRFRAMHSNLHILLLLYGGQYFFSMISRLFQVYFQFNGSESLDDATFD SLLYTVNYTRTICLFIAFNMLPFLVFERCFATCFAGTYETDRHFWIPLTLISVMMPVC VLSAIAYINNWFPIYAHCILLIVLNIGGSLLLIIVTKCNIRLHNSYSTLEHHGLYSLS ERFQVSENIKTCQWLSRIQGSILFFNVACVSILILEHISTNEKLIIMANVSFNILCTI YAAVAPIVVIIYTPEWTRETIRLWHLISPQSNCDHLDLRTTFGEEMSYSDKNVESKVY FDQLQKNLTKQAMEKSRKKQQRSPSWNNDEHEIFL" CDS join(781914..782047,782097..782226,782268..782385, 782658..782741,782786..782917,782963..783152, 783250..783505,783761..783931,783977..784219, 785521..785610,785613..785686,785729..785838, 785883..786403,786488..786601) /gene="Cbr-ocr-1" /locus_tag="CBG_09697" /standard_name="CBG09697" /product="Protein CBR-OCR-1" /note="C. briggsae CBR-OCR-1 protein; contains similarity to Pfam domains PF12796 (Ankyrin repeats (3 copies)) (2), PF00520 (Ion transport protein) , PF00023 (Ankyrin repeat) (2)contains similarity to Interpro domains IPR024862 (Transient receptor potential channel, vanilloid), IPR005821 (Ion transport), IPR002110 (Ankyrin repeat), IPR020683 (Ankyrin repeat-containing domain)" /note="Predicted" /db_xref="GOA:A8X8G9" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR020683" /db_xref="InterPro:IPR024862" /db_xref="InterPro:IPR036770" /db_xref="UniProtKB/TrEMBL:A8X8G9" /protein_id="CAP28930.1" /translation="MGSNPTKVADGEVPDEKLAGTLSENRNIYKMLDMHGGGVLIKLA RQCKEFGCYDMLDAYLDQEVRKFMYNAGKGKLMPIAELVKARNQERNAKLGAFSRKKG KGKSGPNILDEFDQGQAEMAGDLKKALKLLDGGGKGGKSESKYREMVWNLDDRGSMGE HVLAICLLQGTALHNIIAKRLIHFFPKLINDICTSEDYYGLSPLHMAIVNQDAQFTSI LLRLGADLNQRCYGAFFCAEDQKTSRTDSLEHEFVELTKNTNYTGSMYFGEYPLSFAV CTGHHDLFRMLLAKKANLNAQDTNGNTALHLCVIHDKMDMLDAVLDAGGNPRLANKQN LTALTLAARLAKKTESTQHLELMDGLIEQILDEKWKAYGRALWFRSLLGFIFFYCCFV SAYMLRPSSATTEHITRGRINDDGETESTNSSNYLQWHSIDTQCHLMYYSEWPWYHGW FRLGCEVMTIVVMLFQILFDLGDIRRIGFQKWFNFLKAFPAKLMFKGAFLFILISIPC RLACSFHEFLTIDNTMAIISVLLVTQHFLYYMRAIPFVGPFVLMVYTIIATDLVRFAM IYSIFLVGFSQSFYLIFTSCERDSTLIKKTDPLGSEFNNIMENPVDALLRTFIMTIGE FSVLYREMAACDNFWMKWIGKIIFLIFETFVSILQFNLLIAMMTRTYETIFLTRKEWK RQWAQVILMLEMGLTPESRKMHLLRYTRPTGINKRVRSYVVVSRGDGEKTENEELAAR EAKEEQKREEREHEIKAKALALMSAKLKTEVKKRRVLRQQTVDANSRL" CDS complement(join(786658..786780,786827..786973, 787023..787151,787195..787269,787818..787906, 787955..788000)) /gene="CBG09699" /locus_tag="CBG_09699" /standard_name="CBG09699" /product="Protein CBG09699" /note="Predicted" /db_xref="GOA:A8X8G8" /db_xref="InterPro:IPR002641" /db_xref="InterPro:IPR016035" /db_xref="InterPro:IPR033562" /db_xref="UniProtKB/TrEMBL:A8X8G8" /protein_id="CAP28929.2" /translation="MKVSSVFLARLKDLKEAEKLALSFSGCGFLGAYNFGAANRLIKD KIIDDFLPADIEKAQGKLHISITNRKRWENVMINKFDSRDHLISCLLASCYIPMYSMG YRGVPPVINEEEYIDGGMTNNLPTFSDVPTITCSPFSSQADICPEDPSTWNVVFGKQT FKASTQNLYRGARALFPPTRHILKQYYEMGQDDAETFIQGKI" CDS join(788207..788244,788291..788367,788415..788661, 788708..789041) /gene="Cbr-pas-2" /locus_tag="CBG_09700" /standard_name="CBG09700" /product="Protein CBR-PAS-2" /note="C. briggsae CBR-PAS-2 protein; contains similarity to Pfam domains PF10584 (Proteasome subunit A N-terminal signature) , PF00227 (Proteasome subunit) contains similarity to Interpro domains IPR001353 (Proteasome, subunit alpha/beta), IPR000426 (Proteasome, alpha-subunit, N-terminal domain)" /note="Predicted" /db_xref="GOA:A8X8G7" /db_xref="InterPro:IPR000426" /db_xref="InterPro:IPR001353" /db_xref="InterPro:IPR023332" /db_xref="InterPro:IPR029055" /db_xref="InterPro:IPR034644" /db_xref="UniProtKB/TrEMBL:A8X8G7" /protein_id="CAP28928.1" /translation="MGDHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVV LATENVGSVLTDDQPKVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMP TIQLVTELAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATA LGKNDVNAKTFLEKRFTEALELDDGIHTALLTLRESFDVGMNEGNVEVAICNATGFHR LTKQQVKDHLGTL" CDS join(789293..789309,789429..789624,789942..790228, 790276..790381) /gene="CBG09701" /locus_tag="CBG_09701" /standard_name="CBG09701" /product="Protein CBG09701" /note="contains similarity to Pfam domains PF04969 (CS domain) , PF05002 (SGS domain) contains similarity to Interpro domains IPR007699 (SGS), IPR017447 (CS domain)" /note="Predicted" /db_xref="GOA:A8X8G6" /db_xref="InterPro:IPR007052" /db_xref="InterPro:IPR007699" /db_xref="InterPro:IPR008978" /db_xref="UniProtKB/TrEMBL:A8X8G6" /protein_id="CAP28927.1" /translation="MSTKPRHDWFQSDTDVVLTILKRGVPLEDCKVIISDDNHLTVNQ LEDVLFDGELFGQVTSEDVTVKCTPAKIEIRLPKSARFSRWNSLLSDGQGIAASAPTT SPTEFIPSTTPISNVKKNWDAIEKQAVKDEEEEKLEGDAAVNKMFQQIYANATDDVRR AMMKSYSESNGTVLSTNWNEISKKKTETQPPACMEFKKYEK" CDS complement(join(790444..790749,790801..791175, 791226..791386,791550..791713,791817..791992)) /gene="CBG09702" /locus_tag="CBG_09702" /standard_name="CBG09702" /product="Protein CBG09702" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8G5" /protein_id="CAP28926.2" /translation="MIEYVFRTMLKFVKKKTTSTTSPSPAPPIEISRPSNLIVSKHKL VRTEGDFILVVEDDKVVGILDKRDLELAVVPTVQAPPRPVSSTLSSTSSTSSPQSPPY LVPTSSNRSASEVDFPTLSSPVGISPSKYKTLPAGFSAKQQSPLFNWQFSQGSFGLDS STSSNYKSTSVEQLFSPPIPTRNRSESTLQPQGSQKYDTITFAPAVQLPSNSASAQCN VEIHLGDDRSLPPPPSRAPPVPLSYSPCLSAVVHPDEQLDFTEVQSVSVEDRELAAMS YEEVRKTAEDIESYIQGQIQEKWCHDRAQTEKWIENIAGRVAKTETINTIKMEMGSRK RPSLSQVFDQSKSSCPSIAPSDPEPHNDYERLYLSREKLPTERRNSTESESGDIEDIR F" CDS join(793746..793874,794070..794342,794380..794604, 794652..794858) /gene="CBG09703" /locus_tag="CBG_09703" /standard_name="CBG09703" /product="Protein CBG09703" /note="contains similarity to Pfam domain PF00595 PDZ domain (Also known as DHR or GLGF) contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF)" /note="Predicted" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR036034" /db_xref="InterPro:IPR040264" /db_xref="InterPro:IPR041489" /db_xref="UniProtKB/TrEMBL:A8X8G4" /protein_id="CAP28925.1" /translation="MASEKMIEVRVDMEEGEPLGATPNDKLVITKIQPGTIAEGKLRI GDQVKEVNGVKCKDCNDFFRALRFAAPCAKIIVNRDDKKAEELEARVHIPADRAKIIQ RREGYVYELALSSGFRTAQSLDWESNISRLAANRVLVSRVDPGTLAEKCLILGDHLCD VDGVPVTDKDVARDLLVKNLQEKGKVTFVVERPESIDAKQWAKQALAANVMQPPSVQM NDDVKNIAAQYRQALPGLKTPSKSAMSTGRSARQVQIVEQTQTHEIGHDHEGKALRKV K" CDS join(796054..796090,796142..796374,796418..796612, 796669..797040) /gene="CBG09704" /locus_tag="CBG_09704" /standard_name="CBG09704" /product="Protein CBG09704" /note="contains similarity to Pfam domains PF08659 (KR domain) , PF00106 (short chain dehydrogenase) contains similarity to Interpro domains IPR020904 (Short-chain dehydrogenase/reductase, conserved site), IPR013968 (Polyketide synthase, KR), IPR003560 (2,3-dihydro-2, 3-dihydroxybenzoate dehydrogenase), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR)" /note="Predicted" /note="contains similarity to Pfam domains PF08659 (KR domain) , PF00106 (short chain dehydrogenase) contains similarity to Interpro domains IPR020904 (Short-chain dehydrogenase/reductase, conserved site), IPR013968 (Polyketide synthase, KR), IPR003560 (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR)" /db_xref="GOA:A8X8G3" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR020904" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8X8G3" /protein_id="CAP28924.1" /translation="MSRFAGKVAIITGSSNGIGRAAAVLFAREGSKVTITGRNSERLE ETRQQILAAGVPEGNVNFVVADVTTDAGQDKILRTTLDKFGKIDILINNAGAAIPDSE GKTGTAQSIENYDATLNLNLRSVIALTKKAVPHLTETKGEIVNISSIASGNRATPEFP HYSIAKAALDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEEVSKKFYSTMA TMKECVPAGVMGQPQDIAEAIAFLADRKASSYIIGHQLVVDGGSSLVMGLHCQDFSKL LQ" CDS complement(join(797663..797781,797891..798046, 798129..798228,798273..798323,798559..798651, 798751..799647,800525..800672,800718..801011, 801998..802005)) /gene="CBG09705" /locus_tag="CBG_09705" /standard_name="CBG09705" /product="Protein CBG09705" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8G2" /protein_id="CAP28923.2" /translation="MIRSLILLTLLVGYSTSQYAQQQRSGTVQQQPVQNVQAAQPEAI DGIPAWYQMAKPVASRVQQLPQASPSYYERIEPTYEQRRGEQPTYERPGIQTNQYANY PSYQNRQPYENLNALTSGASLSNLQASRRYPSAASGGAGGSDVSRLRHMPYDSALKRY HKLLLKRRQWTTKIGRILASTSPMTPSTVFPTTTTTTTQAPTTTTKKMPKSLKSIYST IIPKTSTTTETPTEAPSTTTQATRVTGRLVGKPRGTFKPHGTRKGWRMWKKVTPKYVG KSSVTTTEVPVSSTTIPMESSTSVTSTTTSENPSTPELPLIEETEESQGTEASTSTTS TSTTTEPTTTTVETTTTEKPTTTTGSEEEHAGKGPSPLRYICRHKAGSNEHDPFSERR ASTIGPFRPITVGHKWKPLRFKKPEPVDEVDTVPATSNTKTAISTRPKGLRLLEYLLK QTDTFAKGLQKAIDGVSASGVSSSSILTNEPNTELLAAIKDVVAKFKASLDEAGIDQD VRLMGNQLKNTWQQLRTGTTQQGLDRGVKAVRQSAESSVTHFNYGPQPLPQPQPVQIP YHHQHHHHPAVHRYTPGPMNEQIGRLFEKAVADAADQKTQQQIQQVQQQMIAPRP" CDS complement(join(805694..805847,805896..806151, 806195..806375)) /gene="CBG09706" /locus_tag="CBG_09706" /standard_name="CBG09706" /product="Protein CBG09706" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8G1" /protein_id="CAP28922.1" /translation="MILNLFTISAALFGLAVCGNYGRDNYDAANSNGNGYYAGPHFVN DKDWGSSSSSSSESDEKRECARLGVFNVTNSFAPLFSAPKIAYYTRQGKDKAIVVCPN PQVQILVAKSRNANPTAENIKNYALISISSKSGVILKCNKRKDRYEGVNLPTGNTVPL DAVACVTANPDGMEEFVEPIYDFLVGFDKINTGGLP" CDS join(807072..807240,807288..807440,807489..808126) /gene="CBG09707" /locus_tag="CBG_09707" /standard_name="CBG09707" /product="Protein CBG09707" /note="Partially confirmed by transcript evidence" /db_xref="UniProtKB/TrEMBL:A8X8G0" /protein_id="CAP28921.1" /translation="MLFFLALSVAVSAVSATYGSGSTYNRPSYSSNPVYYPPAVYDSH YWDYSSRERHHKECPKITTFAGQLPGIPAEAFYPPVIRYVKYGRNVHALISCDKDPKN VNFLFARHNSSRDVRQTNLIAMGSTAGVVVKCDRDERRYEGIAIDLYDEDDYSKTVDV TQVTCMGLDNSAIGLLLELAVREFSTEIFAFMNFVDFFNTGVPAAPVIPPVRRKRDVS DVSTSAPAEETANDITAEATDAPTTGAAANNEVTETPSAPAAVTDKDTENSTAASDDV SEAAKSDVTDAPDTTEAPAPGSPEAVKQAAAKLGAILGRIFHK" CDS join(808454..808588,809092..809205) /gene="CBG27073" /locus_tag="CBG_27073" /standard_name="CBG27073" /product="Protein CBG27073" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHE9" /protein_id="CAR99329.1" /translation="MGCIGSRVSTGNDPPSKLKKAEIELETFPEEIAHIRLRAKSVHF ASHAILHFVPYQWQEELIYDTYQLDQEIATNNSNNQNH" CDS complement(join(809280..809476,809527..809830, 809877..810431)) /gene="Cbr-srh-184" /locus_tag="CBG_09709" /standard_name="CBG09709" /product="Protein CBR-SRH-184" /note="C. briggsae CBR-SRH-184 protein; contains similarity to Pfam domains PF10327 (Serpentine type 7TM GPCR chemoreceptor Sri) , PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) , PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd) , PF10326 (Serpentine type 7TM GPCR chemoreceptor Str) contains similarity to Interpro domains IPR019429 (7TM GPCR, serpentine chemoreceptor class i (Sri)), IPR019422 (7TM GPCR, serpentine receptor class h (Srh)), IPR019421 (7TM GPCR, serpentine receptor class d (Srd)), IPR019428 (7TM GPCR, serpentine receptor class r (Str))" /note="Predicted" /db_xref="GOA:A8X8F9" /db_xref="InterPro:IPR019422" /db_xref="UniProtKB/TrEMBL:A8X8F9" /protein_id="CAP28920.2" /translation="MCSEGISFLATDEFYAGTLHILTAIEVPVHLFGAYIIVAKTPKK MRTVKSSMLLLHFVGAFVDVYLSFIATPVLTLPVCSGYPLGFSLVLGIPTNVQVYLGI SFVGGEAAQLTDSKFSVSVISVTILTFFEDRYHRLTHGHGSNGKRSWKRIIYVVIHYI VSVLFIAPGYLNIPDQAVGRAVTKKTIPCIPDDVLTRPGYFVLSVVNIIPCLCLVFMF SLVMPQTIYFVGAIFYYLLHTVSKSQTTNRLQKQFFFALCIQIFVPIVVLMFPVLYIV LAIWFDYYNQGATNIALAGIAFHGILSTITMLIVHTPYRNTTLSMFRLSPKNTGNNSQ QIWKTVVGAHVTQHSVW" CDS complement(join(810677..810882,810927..811418, 811463..811781)) /gene="CBG27072" /locus_tag="CBG_27072" /standard_name="CBG27072" /product="Protein CBG27072" /note="contains similarity to Pfam domains PF10319 (Serpentine type 7TM GPCR chemoreceptor Srj) , PF10327 (Serpentine type 7TM GPCR chemoreceptor Sri) , PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) , PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd) , PF10326 (Serpentine type 7TM GPCR chemoreceptor Str) contains similarity to Interpro domains IPR019423 (7TM GPCR, serpentine receptor class j (Srj)), IPR019429 (7TM GPCR, serpentine chemoreceptor class i (Sri)), IPR019422 (7TM GPCR, serpentine receptor class h (Srh)), IPR019421 (7TM GPCR, serpentine receptor class d (Srd)), IPR019428 (7TM GPCR, serpentine receptor class r (Str))" /note="Predicted" /db_xref="GOA:B6IHE8" /db_xref="InterPro:IPR019422" /db_xref="UniProtKB/TrEMBL:B6IHE8" /protein_id="CAR99328.1" /translation="MCSYETSYFDSDEFYLTALHILTVIEIPVHLFGAFIVIFKTPKK MASIKNSLLSLHCLSAFVDFYLSFLTSPVLSIPSSAGYPLGVSKWLMVPTSIQVYLAF SLVSAVSVSIVLLFEGRYYVLANGANSNRNCKRKLHLIFLYCLSFLFFLPSFFNIPDQ KEGQLSLIRKIPCFPPDLLNRPGFFVLAVDATVCAICVGSMSSFLVIHGLFYVMSIVW QLSGSSSKSRNSHKLQKQLMITLGIQVVIPISVFFVPTFILIFLVCSNQFNPTVTNMS VVMAAAHGVISTMTMLIVHRPYREATLDTFYWITMKERKPTESKIMITVVGQNAQIAK RVIS" CDS complement(join(811976..812124,812171..812474, 812519..812706,812751..813069)) /gene="CBG09710" /locus_tag="CBG_09710" /standard_name="CBG09710" /product="Protein CBG09710" /note="contains similarity to Pfam domains PF10327 (Serpentine type 7TM GPCR chemoreceptor Sri) , PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) , PF10326 (Serpentine type 7TM GPCR chemoreceptor Str) contains similarity to Interpro domains IPR019429 (7TM GPCR, serpentine chemoreceptor class i (Sri)), IPR019422 (7TM GPCR, serpentine receptor class h (Srh)), IPR019428 (7TM GPCR, serpentine receptor class r (Str))" /note="Predicted" /db_xref="GOA:A8X8F8" /db_xref="InterPro:IPR019422" /db_xref="UniProtKB/TrEMBL:A8X8F8" /protein_id="CAP28919.2" /translation="MCSNTTSFLASDEFYKITLHCLSVFKIPLHTLGAYIVIAKTPAK MSSVKTSMLILHVLSSFLDIYLSFLCIPVFTLPVSAGYPLGISVWLGIPTPLQVYLGC TMVSAVCVSILGCFEERNYILKNGNSQTIRWKRIIYLASLYTVSCLYMLPTYLFMPDQ VNGKFGILQKVACIPEDVLNRPGFFVLAVDGTVCVLSICLDTVFLFAQLMYFVISTTY RLSQTSSKSNATYKLQKQFMVSLGLHTLIPTFMIALPVIYLAVAISQNIYNQAATNIA LAAISMHGVLSTVTMLLVHKPYRVETLAVFRMKRYLNTRINTS" CDS complement(join(815413..815680,815726..815899, 815946..816582,816630..816748,816799..816866, 816912..817004,817049..817138)) /gene="Cbr-secs-1" /locus_tag="CBG_09712" /standard_name="CBG09712" /product="Protein CBR-SECS-1" /note="C. briggsae CBR-SECS-1 protein; contains similarity to Pfam domains PF05889 (Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)) , PF01212 (Beta-eliminating lyase) contains similarity to Interpro domains IPR001597 (Aromatic amino acid beta-eliminating lyase/threonine aldolase), IPR019872 (O-phosphoseryl-tRNA(Sec), selenium transferase), IPR008829 (Soluble liver antigen/liver pancreas antigen)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:Q61JN8" /db_xref="InterPro:IPR008829" /db_xref="InterPro:IPR015421" /db_xref="InterPro:IPR015424" /db_xref="InterPro:IPR019872" /db_xref="UniProtKB/Swiss-Prot:Q61JN8" /protein_id="CAP28918.3" /translation="MKSSFGKKEGEYSRLVSKSSNKLLNSLWEKKQIPEEGWTEHTLD LFLSWLSSHDTNNRVDMIPVGAGEREGRVLTPLVQRLHSNLTHGIGRSGNLLEIQPKA LGSSMLACLSNEFAKHALHLLGLQTVKSCIVVPLCTGMSLSLCMTSWRRRRPKAKYVI WLRIDQKSSLKSIYHAGFEAIIVEPTRDHDALVTDVETVNRIVEQRGEELLCVMTTTS CFAPRSPDNIEAISAICAAHDVPHLVNNAYGLQSEETIRKIAAAHECGRVDAVVQSLD KNFQVPVGGALIAGFKQSHIQSIAQAYPGRASSVPSRDLVLTFLYQGQSAFLEPFQKQ KQMFLKMRRKLTSFAENVGECVYDVPENEISLAMTLSTIPPTKQTLFGSVLFSRGITG ARVVQSSQSKTTIEGCEFVNFGSHTAEQHGGYLNIACSIGMADHELEELFTRLTSSYA KFIRQLAKEDDRRGGSSGRRVPMNESFDMEND" CDS complement(join(817676..817803,817852..818547, 818591..818720)) /gene="CBG09713" /locus_tag="CBG_09713" /standard_name="CBG09713" /product="Protein CBG09713" /note="contains similarity to Pfam domain PF03371 PRP38 family contains similarity to Interpro domain IPR005037 (Pre-mRNA-splicing factor 38)" /note="Predicted" /db_xref="GOA:A8X8F6" /db_xref="InterPro:IPR005037" /db_xref="UniProtKB/TrEMBL:A8X8F6" /protein_id="CAP28917.1" /translation="MANRTEKTAKTVKGTNPQFLVEKIIRQRIYDSMYWKEHCFALTA ELVVDKGMDLRYIGGIYAGNIKPTPFLCLALKMLQIQPDKDIVLEFIQQEEFKYIRAL GAMYLRLTFDSTEIYKYLEPLYNDFRKLRFMNKMGRFEAIYMDDFIDNLLREDRYCDI QLPRLQRRWALEEVDMLPPYKSLLDGDLVAMSESDEEEEEETKKEKPRLTSRRRSRSR DREREVGDRREVREREKMRERRERGDDEPGPSSCLKDRDERRKDRDRSRERDRRDRKD DERRDRKKESSSRRGADNDEDREIAEANALRAKLGLAPLER" CDS complement(join(818890..819672,819719..820280, 820377..820494,820539..820602)) /gene="Cbr-tag-135" /locus_tag="CBG_09714" /standard_name="CBG09714" /product="Protein CBR-TAG-135" /note="C. briggsae CBR-TAG-135 protein; contains similarity to Pfam domain PF00400 WD domain, G-beta repeat contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR001680 (WD40 repeat), IPR020472 (G-protein beta WD-40 repeat)" /note="Predicted" /db_xref="GOA:A8X8F5" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR020472" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:A8X8F5" /protein_id="CAP28916.2" /translation="MAATVSDPYEQIPAAPADEEIEDRPEADKKALLNQVFRSLKRAQ DLFYHDYTQPPPMPEENDNLIRSIKRTHEYGSVIKKVEEAKKRRENEMLALPTSQPSV GAGSVIAAAGTPLAITDGTGKLVNQQASSQKGKLLPLVPLGSNQNGEDKTTRSLLPSK APMMMKPKWHAPWELYRVISGHTGWVRAVDVEPQNQWFATGGADRIIKIWDLASGGLK LSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAIQALSVH PSLDILVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVR LWDLAAGRSMCTLTHHKKSVRALTIHPRLNMFASASPDNIKQWKLPKGEFMQNLSGHN SIINTLSTNDDGVVVSGADNGSLCFWDWRSGFCFQKMQTKPQPGSIESEAGIYASCFD KTGLRFITAEADKTIKMYKPDDSAVREIIILLICQELFQTEESHPIVWRPEIVKKKAY " CDS complement(join(821399..821574,821620..821804, 821846..821970,822020..822235)) /gene="CBG09715" /locus_tag="CBG_09715" /standard_name="CBG09715" /product="Protein CBG09715" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8F4" /protein_id="CAP28915.2" /translation="MLPKEQVNSLLQKESQILEKVFLLVRCTKGVEWKYQQPRLTSAE EWILKADEIMSDLEKLTDDIVLAESFKEINLTESAQLTKRLIDVSNAINNITKNMYKI VNHSQNERLFAAKVVAQQRIKTLLVDQEEAEKLLEYRTNFIRQNDEKKKQELKRMRET EIIEEMRSQALKEHKKYLSSLEAVKALGEVEENTVISNDSLADDVTLTEGHLEIRKRR RSRSLTRKVVGTIKV" CDS join(822615..822667,822714..822921,822975..823405, 823454..824813,824860..825201) /gene="Cbr-lig-1" /locus_tag="CBG_09716" /standard_name="CBG09716" /product="Protein CBR-LIG-1" /note="C. briggsae CBR-LIG-1 protein; contains similarity to Pfam domains PF04675 (DNA ligase N terminus) , PF04679 (ATP dependent DNA ligase C terminal region) , PF01068 (ATP dependent DNA ligase domain) contains similarity to Interpro domains IPR012310 (DNA ligase, ATP-dependent, central), IPR012308 (DNA ligase, ATP-dependent, N-terminal), IPR016059 (DNA ligase, ATP-dependent, conserved site), IPR012309 (DNA ligase, ATP-dependent, C-terminal), IPR000977 (DNA ligase, ATP-dependent)" /note="Predicted" /db_xref="GOA:A8X8F3" /db_xref="InterPro:IPR000977" /db_xref="InterPro:IPR012308" /db_xref="InterPro:IPR012309" /db_xref="InterPro:IPR012310" /db_xref="InterPro:IPR012340" /db_xref="InterPro:IPR016059" /db_xref="InterPro:IPR036599" /db_xref="UniProtKB/TrEMBL:A8X8F3" /protein_id="CAP28914.2" /translation="MFFSKAGKAAVEWAKGTKVPYKDFAQTLEKIEDLSGKKKIDELA QFFTKVLDFSPEDLTACVYMSVNQLGPSYEGLELGVAENSLIKAVAKATGRTESKIKE DLRIKGDLGTVAQQSRSNQKMLAVPKALTVPTVFNKLTEIAKLSGVSAMNKKVDAISA LLIACQGIEARFLVRMLAGKMRIGLGEQSVLSALGHAFTFAKQAESEKKMTGEKLDAL KDTNVKRVKTAYCECPNYNRIIEVALSEGIEVLEEKCKLTPGIPLKPMLAHPTKGIDE IMRRFRNQTMTCEWKYDGERGQIHKREDGQIFIYSRNQENNTSKYPDIIEKISTCIGE GVESFIVDAEVVAIDESGAILPFQVLTTRKRKNATDDNGVKVGVFLFDLLFFNGESLV RQPLRKRRELLRKNFKKIEGSFYFATSVDTMDTDEINSFFDEAIQNKCEGLMIKTLDT EATYEISRRSKSWLKMKKDYVDGVGDTLDLVVMGAYVGNGKRTGVYGGYLLGCYNPTT EEYESVCKIGTGFTDEDLSEQFKILQEKKIDRAPVYYQFDPTLKPDDIFAPHLVFEVK CADITISPRHKAAGGLTEDGKGISLRFPRFLRIRDDKNPDDATSSEQVLEMYRNQEIF SNQKIEQDDEKDDDDMDGEDEEEEKADLNNTNASEGSSKENPKVVDEKKDVVKTEKSK EKKSPVKSSPVKQSQAKKSPIKTSSVKTSPAKKEIEKKKKGPVASIFSSSKKVTKEEV VEVEKVSIKKSKESPSPKKKKRDEFSSNDSDSDEDAFAKKKQPTKKRSRVVIDSDSE" CDS join(832010..832131,832185..832340,832389..832452, 832809..832976,833024..833123,833163..833217, 833467..833565,833591..833705,833774..833974, 834020..834178,834787..835009,835192..835788, 835833..835930,835956..836247,836294..836504, 836556..837154,837406..837525,837570..838008, 838057..838160,841937..842058,844754..844851, 848911..849083,851937..852076,852316..852453, 852498..852608,852685..852819) /gene="Cbr-nrx-1" /locus_tag="CBG_09719" /standard_name="CBG09719" /product="Protein CBR-NRX-1" /note="C. briggsae CBR-NRX-1 protein; contains similarity to Pfam domains PF02210 (Laminin G domain) (6), PF00054 (Laminin G domain) (4)contains similarity to Interpro domains IPR001791 (Laminin G domain), IPR006210 (Epidermal growth factor-like), IPR012680 (Laminin G, subdomain 2), IPR012679 (Laminin G, subdomain 1)" /note="Predicted" /db_xref="GOA:A8X8F2" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001791" /db_xref="InterPro:IPR013320" /db_xref="UniProtKB/TrEMBL:A8X8F2" /protein_id="CAP28913.2" /translation="MRRKFDDTGQYSKWLIALLIYLLFGVVDSIILTGAPDSYSRYPK WAHSFENSLSMELKTRQSDGMLLYTDDGGTHGNFYSLTIVEGHIQLDFRLGDNSNEFG QRRPVNTIRIEEVRIDDDKWHTLTIFQSWENVKLELDYTLVFKILNQRSFVFGNILKN SDVFIGGLPPNMHMLPVMSSPLRRYTRHLAVNVRNLMYRQYPQALLVLRLVQVERDNE IVEECHISTASGIRGHTHQRRRPLQVEICLFLAFLNLCRHASNSCVSTTVNAIQPTMD HIAIASFLIMTEEIVKLKVGDCGKLLFLVSEKNDGELTFGGDEWVGYDVSMNISAAVR AKKENLTLTFKTVHGTSMLFYAGDEKSYLHLMLQDGAIIASSKFDGSDARIIRMFNSF PSQRYDDDSWHTIVLERSLQMMTLIVDGRRDEIRQYAPELDWISNSFAYLGSIPKHNP SKEVNRVSFRGCMRKVRYDVDATRVLFVNLADQSYGGTFHFRTTSPDGLILYHGVMQH NATDYVAFELIDSHLFLIINLGSGVVRLQTTAMKVSDGEWHHVQLDRLSRTGSVIVDA IKIDFNTPGVSANLIIDDPIFIGNVPNNSIAYPPSVWSITLQKGYTGCIKNIRLNGVS AKIAQQFESTNTTGIELGCSLSNELDICEPNPCQNFGRCSRNLNSFECDCSNTNFEGK RCEIEQTAVEVDGDESKVHVLAHTKVSQVEHIQIRFRIKNFFQTSSTRGVLFDTGANG KNDKITVFLNDSLLNLFLQDSLTNNVSLECFQIKYVNLFQTFSWGKSLSDNHWHELQV RRLGQKLLLYLDGFWSHSIYLQNPISVEIDEIGAAYSVHPSSPPPRDEHFKGFLSKLI FNGNDYLAKTKRDSALLSKSTSRESKGQRNVKTRIASISFTNSTGYVAFSSDKISSLA GSFRVQFKFQTLMRSALIFFTLPKHDYDQSFRLQIINGRFVNIILVECKCEVSRLKYT YRISGQEFHTTSPKLPYRQHLSDMRWHSVLIYQDEKTNDHVLLVDNSTTTLIIDKMKK VESRMSGKLYFGSNPLGVSRPSNGYRGCISTLRINEKALDLYEDADSRMNVNRGCSGP IARCVEDACANHGRCIQLWSSIRCDCSLTAHSGDRCQNPSTTVRFDGSPSAIFYEYAP NERPTTSKDYFVFSFRTTQPNGVLIAIECAADQDYFTIFLNKGYLNAHYNLGSRDHTV SYHTRVLNDGFPHVIKISRNESSLTIQVDKLPALRYRPKKASDLVLLNMQTRISIGAS FNTRHLEQRRRMLRHRRNTEIFDSYQGEVSGVNVNGLMVLDLYENGSNRIHTIGAPQT TAVSEAVSNSSEEDDELAEMMMAHSIEENPNEALIESLAPSCLSLEEQQTCFIDTDDS TGTMNDVSGETNGSVLVLKRDIPGDPFEDVSSTDNSSFFAGFFSPVLPAVADIPSTRP SENIDNEVTALITSSIAPQKTRPKSTPHFTVYPVRPTTPMGDTITTTMQAATVTDFPR TPLIMGSSLAVIIAIAAVVFFVFKCRQNPPASEHYTMAMKSQSGYTAIAPELSPPMNH DRNNDSCTQPLLAKPHINGNGYEPLKGAVIANGNGATATMMRNGNGNGVAKKKDFKEW YV" CDS join(853356..853472,853520..853630,853671..853767, 853820..854450,854497..854577,855196..855261, 855320..855385,855430..855492,856618..856923, 856971..857117,857163..857436,857492..857560) /gene="CBG09720" /locus_tag="CBG_09720" /standard_name="CBG09720" /product="Protein CBG09720" /note="contains similarity to Pfam domain PF00092 von Willebrand factor type A domain contains similarity to Interpro domain IPR002035 (von Willebrand factor, type A)" /note="Predicted" /db_xref="InterPro:IPR002035" /db_xref="InterPro:IPR036465" /db_xref="UniProtKB/TrEMBL:A8X8F1" /protein_id="CAP28912.2" /translation="MSRPWPSSSLALLSLFLIILRQSLACIDVLFVIDNKTLEVSRNR ALQVARQLPENQKIRKWVVLSRNDRYVPRVLRNNAELQSVLSTIHGDYDRFLEIATGE IARRTATFQPFVILLFSETPVNQTMTKLWRSISLAPALHIYRIGSFQRTKFVGTKSEN RQFLESFSYSRMLSEDQETDFEKLILCGRNRTDLFNTESSKFSGGNEIRRSPTSTPHP WTSTRDPFVRRLTFYDASRTLIEEKRKQEQLKQQQLSQINKQFTITRTFKKMTTKSQS FTRIPTTTSRTTKTTRNHISYTTRTPTKYDAKKFSGSYQASTRKPQPFKWFTTTKKPK FNPTTVKKYTTSISETTTRKPYTTIKRPQTYVTRTPFTTTTKRPLPTSKHVGTSVRKI LLSTTRKPEITPTTPYYTSPSITTTPSSVPAATIDSPLKKHEGGGNEIEELNGKNFKV RSRSVHFAMTEKPPVTTAMNPMKFFTTSRTPITTAKSLIPYSCTADVFFLVDLSQGTG DKSQQYLDIAASAISSLPISQEAVRVGLISYSGPGRTHVRVYLDKHNDKEKLIEEMFL MERHGGTTRTADAIRYATKIFEGMAHPARKNVKKVLVVFTDGYSQDHPRDAARGARAK GLQLIAVAVKDRLAPPDEEQLAEIGGHAKNVFISPNGRELREKIIGTQCRL" CDS complement(join(858000..858083,858179..858788, 858837..859102,859152..859423,859491..859636, 859755..860071,860122..860281,864246..864394, 865156..865249,868351..868454,868521..868628, 868680..868832,868878..868946,869506..869670, 869786..869902)) /gene="Cbr-saeg-1" /locus_tag="CBG_09721" /standard_name="CBG09721" /product="Protein CBR-SAEG-1" /note="C. briggsae CBR-SAEG-1 protein; contains similarity to Interpro domains IPR001005 (SANT domain, DNA binding), IPR016160 (Aldehyde dehydrogenase, conserved site), IPR007087 (Zinc finger, C2H2)" /note="Predicted" /db_xref="GOA:A8X8F0" /db_xref="InterPro:IPR000949" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR017884" /db_xref="UniProtKB/TrEMBL:A8X8F0" /protein_id="CAP28911.2" /translation="MPPPQHPPSYYAPRRSISTITGPNRRDVDAFYQHNFPQKMNGNG EHEFQAPSSHHQNRPSIMSGQSNQSQQLPVSLVLKLKIIIFSRYPVPTVVTKNFSYEP LRFSPPNVTPPPQFNENNRKSNQRVRFDELPNYPNPNNFSVPPRKCSLAPNFFSSQNS HHMYPDQYTPRTWQNNEFMPNHQIHPYHSNHQQPPPPHPDWTNQPVTNGNHNQSHNPM HMRKHSSGPRVDIKLEHVDNPFGNLSHDMMDVTSSGQPPQQTVKSEMLSPLKMDQLDP SKQVPSPTFLSMSSSLLLKQQQLQHKKSHHNVPSRKASIMALKSQLRTPRGSQLNPLS SCTELLPYTPPPILAPMRNGSGLFCQIAKSANSLLPVAEQIAGSPSCSNGSDADVKSI LNGKKKSEDGDGPSRKNGFFYMAQQMNQTNFANELEALRKESWASTSSADEKMQAERK ESLEAIRKSSCMSDSYYDYDGPKISDPNPHINLGKTYQARVKKWAERQVPQSERDDIE DRDECVFSSEILKDIDVEQINAFELLACSQACPRAGRNKELAIHLLMENKGNIEAAVD DLLRSDTLDWEHYSNIFGYTYNDTTLWTPEEISQFQDAIYKSEKDFDKVAVEMSGKSV RDCVQFYYSWKKDCPDDYRKLRNLRRKRQLLDINLQKNQLEEPEGPPKKKMSLMESGE SDNESTATETSFVGNGLLEFRDRAFTSPIMSSPREEALLGMSPVSKDLFGIQKNYQPS VPRAHHTPSASAGKKGAQPSADGFFHCRLCDKCFEKVKSLNAHMKSHAMKARAEQEAK AHDAQIAAAAAQLTSAVGNAVGNAVGNSVGTTVASSPLNPFGNGHLGITIPSTIGSLT PQQLTPQQININQQLQSQLNSLSSLSSQLNSPLTPQQQLQQFTQQQLMARAMQQNLFQ PVTSTPLVQSTHPLIQAGLHSIN" CDS join(882306..882360,882406..882509,883426..883566, 883640..883789,883840..884269,884321..884442) /gene="CBG09724" /locus_tag="CBG_09724" /standard_name="CBG09724" /product="Protein CBG09724" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR020636 (Calcium/calmodulin-dependent/calcium- dependent protein kinase), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8X8E9" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/TrEMBL:A8X8E9" /protein_id="CAP28910.1" /translation="MRARSSSVTVLYDKRHRKGVSLDRNNNYASREVEKQPRMVHTSS RHVNEGFFGVSKWIQHVDGRQEIEKQYEIGAVIGKGNFSSVHLTRRKEDGTKCALKQV EKRAMRGKCFFVDNEVEMLSLIQHDHIISIIDAFSTDNQYFIVFEHAQYGDLYETIRK NGRIEESDAAMITLQVASALTYLHERNVVHRDVKPENLLLVDKFSVKLCDFGLACHVL GPLYRICGTPTYCAPEVLRETGYSTRCDIWSLGVVLYVMLVGYAPFRAPDQSRLFKLI LQAKPNMDMPEWKGVSMRAKDLVSRLMNKNEERRPLASQIVSHPWIAPFTMENIDDE" CDS join(884806..884977,885025..885332,885375..885554, 885597..885729,885972..886106,886227..886354, 886397..886447) /gene="CBG09725" /locus_tag="CBG_09725" /standard_name="CBG09725" /product="Protein CBG09725" /note="contains similarity to Pfam domain PF00067 Cytochrome P450 contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002402 (Cytochrome P450, E-class, group II)" /note="Predicted" /db_xref="GOA:A8X8E8" /db_xref="InterPro:IPR001128" /db_xref="InterPro:IPR002402" /db_xref="InterPro:IPR036396" /db_xref="UniProtKB/TrEMBL:A8X8E8" /protein_id="CAP28909.2" /translation="MALLIPILLGVLAIIFVMCSKRIKWILKVFEFSDKLPGPTTQPF IGNISSFAKMSKIEMLDYMIKTANELRDSGESIMRFQFIGKLLVFPLDGKSAQTLLQS TTELDKGDDYEFARAWLGRSVLLDGYGERWKSHRRLVTPTFHFAKLEGYLGVFNRETK VMVELLDEFAKSGETVDLFHYIKRCTLDIICGTAMGTTIDAQHNPTHSYVLAVERFNK LSVDHSMKAHLQIPFLFWLLGYQKKKDDYVYTMKKFTRDVTAGRMTDDPNGDVDSEGI KKLDYTERVLKESKRRIAPVPTLQRKLREDMEIAGLRNCVGQKFAQLNEKVLLIHMLR NYRIEPMLDFNGTQPSLEIISRPSNGIPVMLTRR" CDS join(886745..886922,886963..887063,887360..887473, 887697..887915,887958..888166,888215..888325, 888372..888522,888573..888721,888764..888827, 888875..888987,889031..889046) /gene="CBG09726" /locus_tag="CBG_09726" /standard_name="CBG09726" /product="Protein CBG09726" /note="contains similarity to Interpro domain IPR004245 (Protein of unknown function DUF229)" /note="Predicted" /db_xref="GOA:A8X8E7" /db_xref="InterPro:IPR004245" /db_xref="UniProtKB/TrEMBL:A8X8E7" /protein_id="CAP28908.2" /translation="MSFTVKHKQSIFPSSMILMFFTFFLLIFTIIISRQSRTNNEFDK EGGLNLKPDFVYSLIEIRELLTNACKIPYIFFPNEDDKVYELLDENRKPVTKDVPVKV PFYNFAFSCVQNEIVKFLKPFVNFALIPKKEPKPLNDLLLQLGLNSETQNVFDKAKEH KFTTFFSGPKLIRDLIDPDFDTTDHQNFIQQFLVDERSCLKDGRNLLSDQLEKMNAFL TSTSDSKTFSTLFLDDYGPHKSSIDHELNEMLNSLNDSKIFENTTLIVTSYGLSEKDV ETENEKNPLFAVRLSDKFMKNYQEKHYFMKMNFNRLLSSLNFNSMLIELMDPYAVIST TPFKVQPTWRNCASEGISAISCVCMNMNLKSEYPEESEKNFLNQLRSKFGKEVNSKKC VRSFETEDYSFFYDYALNTKKELRGVELTGFANITGFSGEKTLMLKKMFTFKKDFESF QSFDTARVIVAYEVNIGIASMCDL" CDS join(889919..890090,890137..890204,890253..890753) /gene="CBG09727" /locus_tag="CBG_09727" /standard_name="CBG09727" /product="Protein CBG09727" /note="contains similarity to Pfam domain PF01826 Trypsin Inhibitor like cysteine rich domain contains similarity to Interpro domains IPR002919 (Protease inhibitor I8, cysteine-rich trypsin inhibitor-like), IPR013032 (EGF-like region, conserved site)" /note="Predicted" /db_xref="InterPro:IPR002919" /db_xref="InterPro:IPR036084" /db_xref="UniProtKB/TrEMBL:A8X8E6" /protein_id="CAP28907.1" /translation="MSPLYLILPFLLVLPTVPHELHHKAFRSLKTPKVNKHRLSLIIQ RLKSNDTTRLNNPEHCPMFQSFSHCACEPTCNNPNPICENCEPGCTCRNGFVRSSLRL CVLPEECPRTKLRRFELQPPKRLYEAVPVVLTTTTSPTTTTTEEPTTTETPTTTTSES SLVEEIMTVPLIVLRNGPTPPSAPPMLQEPISDMIGAPSATPPPDFSYGPPGMNAAKV ALYENFLKQKRIMRALRHRRNQFAKRML" CDS complement(join(890963..891093,891148..891223)) /gene="CBG27071" /locus_tag="CBG_27071" /standard_name="CBG27071" /product="Protein CBG27071" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHE7" /protein_id="CAR99327.1" /translation="MQPLVAVVFFLFLLIGSSQSAPLFKDIDYKLFDNTADNGVAIDS IFEFVPETSTDNKKRPHRRSTKHH" CDS complement(join(891888..892265,892312..892687, 892731..892814,892863..893022,893069..893352, 894272..894397,895421..895533,895581..895787, 895988..896095,896143..896325,896586..896690, 896746..897140,897194..897295,897347..897427, 897479..897521)) /gene="CBG09729" /locus_tag="CBG_09729" /standard_name="CBG09729" /product="Protein CBG09729" /note="contains similarity to Pfam domains PF08190 (pre-RNA processing PIH1/Nop17) , PF04893 (Yip1 domain) , PF02913 (FAD linked oxidases, C-terminal domain) , PF01565 (FAD binding domain) contains similarity to Interpro domains IPR006977 (Yip1 domain), IPR006094 (FAD linked oxidase, N-terminal), IPR004113 (FAD-linked oxidase, C-terminal)" /note="Predicted" /db_xref="GOA:A8X8E5" /db_xref="InterPro:IPR004113" /db_xref="InterPro:IPR006094" /db_xref="InterPro:IPR006977" /db_xref="InterPro:IPR012981" /db_xref="InterPro:IPR016164" /db_xref="InterPro:IPR016166" /db_xref="InterPro:IPR016167" /db_xref="InterPro:IPR016169" /db_xref="InterPro:IPR016171" /db_xref="InterPro:IPR036318" /db_xref="UniProtKB/TrEMBL:A8X8E5" /protein_id="CAP28906.1" /translation="MSNGFWMDDGQQQQGGWNTQTNQQDMGWGQFDYSQHQQPQQPAG NDYYQQNQQQYQQPQNNYYGGQMFMPNTGTGALPNPAADGEDYENEPPLLEELGINFS HIKEKTIAVLNPTGSATVEVIADQDLAGPLVFCLLFGAALLLHGKLSFGFIYGVGGLG CVGIYALMNLMATDEKNISFTCTASVLGYCLLPMALLSIVTAVLSFKGIVGYLISSLA VLWCSSASSKLFVIALSMDHQRLLMSLKIEKPQKEEVWNIKPLPGYVCKWKDIKVDGG FSEEFRKCFVNVCHCEELPPPLEDLEQDEIAAQLDAGNPSFRIPMSVGEMDCVRDHSN ENSVKHGIDLDPLKPIILRNRVAVGDLEVQRINKKPEQRVVEELYHKDSAKMKEATED HQKDYHIQELNELKQEIFGVKSIQGTRIRLFDGKRLEISMRCELDGKPISDPKSTQAI QNAIEKSLPDFQKIAGSSGVRTQESVRRQFARDESHFVAPPPAVVLEPTNVEQVSQLL KLCNDRNIPVVPFGTGTGLEGGSMSILGGVCLSTQQVVGEPTLREQDFVCSVKPSTTR IALNDSIKHSGLFFPVDPGADASVCGMVATSASGTNAIRYGTMKENVVNLEVVLADGT VIDTKGKGRCPRKSSAGFNFTELFVGSEGTLGVITQATVKVHPRPQFLSAAVSSFSSV HQAASTVVEALQWSIPVARIELLDDVQIKACNAYSGLTLREAPTLFIEFHGSSEKEVA DQTTAVEEICKSHEALDFDSGASPDKMAILWKARHNAYYAALSMRTGARGFTTDVCVP ISKLADVISETRADLDEHGIHGTVVGHVGDGNFHVILPTIEEDKSEHRKIQSFSDRLV RRALAADGTCTGEHGIGLGKRKYLREELGENTVRLMHTVKKALDPRNIMNPGKVLPEL " CDS join(899087..899180,899234..899346) /gene="Cbr-emo-1" /locus_tag="CBG_09730" /standard_name="CBG09730" /product="Protein CBR-EMO-1" /note="C. briggsae CBR-EMO-1 protein; contains similarity to Pfam domain PF00584 SecE/Sec61-gamma subunits of protein translocation complex contains similarity to Interpro domains IPR008158 (Protein translocase SEC61 complex, gamma subunit), IPR001901 (Protein translocase complex, SecE/Sec61-gamma subunit)" /note="Predicted" /db_xref="GOA:G2J6N1" /db_xref="InterPro:IPR001901" /db_xref="InterPro:IPR008158" /db_xref="InterPro:IPR023391" /db_xref="UniProtKB/TrEMBL:G2J6N1" /protein_id="CAR99326.1" /translation="MDQFQALIEPARQFSKDSYRLVKRCTKPDRKEYQKIAMATAIGF AIMGFIGFFVKLIHIPINNIIVGA" CDS join(899682..899835,899883..899994,900044..900200) /gene="CBG27070" /locus_tag="CBG_27070" /standard_name="CBG27070" /product="Protein CBG27070" /note="contains similarity to Pfam domain PF04275 Phosphomevalonate kinase contains similarity to Interpro domain IPR005919 (Higher eukaryotic phosphomevalonate kinase)" /note="Predicted" /db_xref="GOA:B6IHE5" /db_xref="InterPro:IPR005919" /db_xref="UniProtKB/TrEMBL:B6IHE5" /protein_id="CAR99325.1" /translation="MDKFVIAISGKRKSGKDYCTNNSIKAFEKIQLSVSAVGISHSLK EEYAKIHNLNFAELLTDGPYKEQFRKDMIRWGEDVRNKIPSVFCRAALLSVDDSDIVI VSDCRRITDLEFFVRTIKLSQFVLRLSKSTDSNGDFDS" CDS complement(join(900418..900654,900698..900798, 900842..900950,901001..901140,901196..901292)) /gene="CBG09731" /locus_tag="CBG_09731" /standard_name="CBG09731" /product="Protein CBG09731" /note="contains similarity to Pfam domain PF06979 Protein of unknown function (DUF1301) contains similarity to Interpro domain IPR009724 (Protein of unknown function DUF1301, TMEM70)" /note="Predicted" /db_xref="GOA:A8X8E3" /db_xref="InterPro:IPR009724" /db_xref="UniProtKB/TrEMBL:A8X8E3" /protein_id="CAP28904.2" /translation="MTSLLPRILLRPVRISASNFIRITRNLGTTQKCCIETIPLSKVN KDDLGHSILIHQGTLPPGSPKTPHDVVAMGVKGAKILSLSSSVAGAVMVPVLSSYLWE AAAEKPTMMMFAIVANTFLVLLSFTPLLLHFLAKRFPIDIFYNNDKKLYTTIHYNFLM QKQALRFSAADVVDAAIAPEMKKVWIPLATAFVGKRPLLISLDRNAYLDKLAFDDLTK NVHIPANHD" assembly_gap 901688..902687 /estimated_length=1000 /gap_type="between scaffolds" CDS join(905463..905507,905561..905710,905856..906074) /gene="CBG09732" /locus_tag="CBG_09732" /standard_name="CBG09732" /product="Protein CBG09732" /note="Predicted" /db_xref="InterPro:IPR035126" /db_xref="UniProtKB/TrEMBL:A8X8E2" /protein_id="CAP28903.1" /translation="MTIPFYIVFSALVFVIGCTSEDQLLTEEGSGFEPPKFVNISVEL VSNRSFDPEKNASNLKIVKDTVDDYSRTEGIKYPSDNIKQSIVDHGGKFAVMFKIQDD ARCDEVRRFIKGAKKHSKEVSYAVLKCDGEKTQVL" CDS complement(join(906298..906382,906785..907014)) /gene="CBG09733" /locus_tag="CBG_09733" /standard_name="CBG09733" /product="Protein CBG09733" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8E1" /protein_id="CAP28902.2" /translation="MIRPIFFVLAFAAYSAYALQCHQVTAGNLSIPDTSQRQVTQELS ISSTHHCFSGMYGWSSHLPQSRRLLPWNLHQAICNSAPQTGLITAFGITTALVSLVKF MA" CDS complement(907733..907939) /gene="CBG27069" /locus_tag="CBG_27069" /standard_name="CBG27069" /product="Protein CBG27069" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IHE4" /protein_id="CAR99324.1" /translation="MNPLHQFLISAQSDTFRNLAVKLHLSKHLLFWSLDNRQLNGFFF FWPLNIHFFFDFQENNSELIQIVS" CDS complement(join(909759..909837,910606..910691, 910742..910831,910882..911016)) /gene="CBG09734" /locus_tag="CBG_09734" /standard_name="CBG09734" /product="Protein CBG09734" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X8E0" /protein_id="CAP28901.1" /translation="MSRNLPIFLLIILALMAATNALRCHQINRGSINDPNAITTATSL QDCMVGANSCVKTIDYSQGVFSKQCQVGNCTTALGQTQAPANCFNNSINTFATCCCYG DGCNASPSMLPLATSLFAVLIPAFLLS" CDS join(914242..914391,914439..914579,914623..914744, 914787..914867,914910..914974,915054..915137, 915182..915282,915326..915430,915507..915699, 915749..915864,915908..916149,916195..916389, 916437..916674) /gene="Cbr-nas-31" /locus_tag="CBG_09735" /standard_name="CBG09735" /product="Protein CBR-NAS-31" /note="C. briggsae CBR-NAS-31 protein; contains similarity to Pfam domain PF01400 Astacin (Peptidase family M12A) contains similarity to Interpro domains IPR017050 (Peptidase M12A, astacin, nematode), IPR001506 (Peptidase M12A, astacin), IPR006026 (Peptidase, metallopeptidase), IPR013032 (EGF-like region, conserved site), IPR003582 (Metridin-like ShK toxin)" /note="Predicted" /db_xref="GOA:A8X8D9" /db_xref="InterPro:IPR000859" /db_xref="InterPro:IPR001506" /db_xref="InterPro:IPR003582" /db_xref="InterPro:IPR006026" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR017050" /db_xref="InterPro:IPR024079" /db_xref="InterPro:IPR034035" /db_xref="InterPro:IPR035914" /db_xref="UniProtKB/TrEMBL:A8X8D9" /protein_id="CAP28900.2" /translation="MSMIFQLLFYGILGTCLVLAQVDVNQALNKNKLDVGTISASGLS DAELEQTFPRTNIHRMRNALKSLRQNWSNKLQAMPARNYQSAGINQESEIPEQQTPLR EKPRDRIKVEGDTLHQVNKKAGLNDILYQGDMVLTDDQISTILESQQDSTEATPARAR RQAYRDRYYPSTTWGTSVYYYYDRTATSKIVKAFEQAVAFWQNVTCINIIQSSTAVNR IRVFKGQGCYSYVGRISGVQDLSLGTGCEEFGTAAHELGHALGFFHTQSRYDRDNFIS INYANIDTSSTNYNYGMPYDYGSIMQYGATSASSNDRPTMVARDAEYQDTMGSDFVGF YDISMMNEHYKCKELCSAGTSAQCTNGGFPSPRNCAICICPSGYGGNFCDQRPPGCGD NLNATAAWQSFTNTIGDGLPTLRDNHTMCNYWVRAPDNQSVEIRISGLTTVTIDGCIF GGIEIKSHKDQKLTGYRYCSSADQNTVRRSTGSLVPIILFNRYASTKAVLEYRAVTPS SESTVTTATTFAPIVSSCQDLHPNCDLYRYFGLCQSKMIRKQCQLACRNCENHSVSSF GTNFGPNNVSNNNYFNSQNNFNNWYMNRNNNYYPYNSNPFPWYF" CDS join(917173..917271,917629..917697,917770..917874) /gene="CBG09736" /locus_tag="CBG_09736" /standard_name="CBG09736" /product="Protein CBG09736" /note="contains similarity to Pfam domain PF00173 Cytochrome b5-like Heme/Steroid binding domain contains similarity to Interpro domain IPR001199 (Cytochrome b5)" /note="Predicted" /db_xref="InterPro:IPR001199" /db_xref="InterPro:IPR036400" /db_xref="UniProtKB/TrEMBL:A8X8D8" /protein_id="CAP28899.1" /translation="MTAKDQDSLKEYTRAQVEQHCTHDDLWIIFRGKVYNMTPYFNQH PGGLAILRYAGKDTSTVLPYVASHGIAWKVVEKKLQEHLIGKLKKT" CDS join(925367..925423,926505..926665,926717..927053, 927101..927465,927514..927644,927693..927829) /gene="CBG09737" /locus_tag="CBG_09737" /standard_name="CBG09737" /product="Protein CBG09737" /note="contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domain IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8X8D7" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8X8D7" /protein_id="CAP28898.1" /translation="MDGGNLTAEELLSSNGSSTAAPIPYSMPCWAPDDYLITERFWIC VVAGITVSIISIIFNTFIFFVFVTNKQHRRSPNLYLLLLSLFDVFIAFAYIAVMSVRI LINFTSSVFLKSIWVRYMIPMLTVSHIGITSSTFLICFASIERYCITVNNFLVPYLQK HRPILTFIAIMCGIVSKGTFVKEVDIQLNPDCYGELNYWNVVPSSLLDEFPLFNQYWR FYFRNIFTILAPFFILLLVNCLLLFQLREHVLKSKGADHDKQNVKEKKARIRATTKSV VIIVCTYLMSNLLSVIITIWEYIDSASIFSEDWIAFYVLSVDVISLLTIVASSARLPI YAYFQPLLRKEMGQCLGDWCCCIPEDNKKLSLLDELQIPKTQLISTPDGESPSISSKI EFV" CDS complement(join(928104..928153,928202..928355, 928404..928446,928558..928667)) /gene="CBG09738" /locus_tag="CBG_09738" /standard_name="CBG09738" /product="Protein CBG09738" /note="Predicted" /db_xref="GOA:A8X8D6" /db_xref="UniProtKB/TrEMBL:A8X8D6" /protein_id="CAP28897.2" /translation="MSQANHLSYSARMRGRSKQPIYSSDKRAKFTQKSGVNVYYIYIW DPGYITKYPAEPANKTVMIHKSPILSQRVERDLLPMITTIEEKVEESKKIDLASILQD GLKSMESKERTSLDNG" CDS join(932529..932669,932716..932823,932870..932932) /gene="Cbr-spp-16" /locus_tag="CBG_09739" /standard_name="CBG09739" /product="Protein CBR-SPP-16" /note="C. briggsae CBR-SPP-16 protein; contains similarity to Interpro domain IPR008139 (Saposin B)" /note="Predicted" /db_xref="InterPro:IPR008139" /db_xref="InterPro:IPR011001" /db_xref="UniProtKB/TrEMBL:A8X8D5" /protein_id="CAP28896.1" /translation="MKFFVALILGVLLLSTSISAQTPISCAFCLSGIAQINQQIVSSP DMQAQMGIQASQGCDQIPVKKTRQTCRGSLNTNFSIFYANFTEQANNSPTQMCINMGM C" CDS complement(join(933089..933555,933931..934042, 934139..934242,934427..934547,934597..934748, 934929..935109)) /gene="CBG09740" /locus_tag="CBG_09740" /standard_name="CBG09740" /product="Protein CBG09740" /note="contains similarity to Pfam domain PF00014 Kunitz/Bovine pancreatic trypsin inhibitor domain contains similarity to Interpro domain IPR002223 (Proteinase inhibitor I2, Kunitz metazoa)" /note="Predicted" /db_xref="GOA:A8X8D4" /db_xref="InterPro:IPR002223" /db_xref="InterPro:IPR036880" /db_xref="UniProtKB/TrEMBL:A8X8D4" /protein_id="CAP28895.1" /translation="MVLRLCRFLTPSLSSSSASGRCAKLFLLLLSANSILIGFVLGQL PDELDPFLEKLFEFEECEDFLGSTDYTNIATTKCDPHTCDFPRQICARPAAKFQDSSA NTCRTIPLECITAANGGVAPGPSIRPTPSPFMPQPSIPNGISPMIPSPSAVSVTPSPT DPLAICKMGVPNGRFCGFRPMFTYNKETLQCDEFWFPGCRTAETNANLFEDYQQCQKV AEMCKPTPPPTLAPFRPRPHTTRRPQPPPSPPPPPPPSPFVDAFKSFGGNSQAGQGAL GAIGMFTGSGLGPTGQGPLGNFAPNPNAGAPPPAAGGAGGQDGQDLGLFGLIQQGIMG AQAAGQGGKPGKEATAKAAGQILQQFTGFDLGGIGNNFGGLFGR" CDS join(936458..936551,936605..936717) /gene="CBG27068" /locus_tag="CBG_27068" /standard_name="CBG27068" /product="Protein CBG27068" /note="contains similarity to Pfam domain PF00584 SecE/Sec61-gamma subunits of protein translocation complex contains similarity to Interpro domains IPR008158 (Protein translocase SEC61 complex, gamma subunit), IPR001901 (Protein translocase complex, SecE/Sec61-gamma subunit)" /note="Predicted" /db_xref="GOA:G2J6N1" /db_xref="InterPro:IPR001901" /db_xref="InterPro:IPR008158" /db_xref="InterPro:IPR023391" /db_xref="UniProtKB/TrEMBL:G2J6N1" /protein_id="CAP28905.1" /translation="MDQFQALIEPARQFSKDSYRLVKRCTKPDRKEYQKIAMATAIGF AIMGFIGFFVKLIHIPINNIIVGA" CDS complement(join(937789..938025,938069..938169, 938213..938321,938372..938392)) /gene="CBG09743" /locus_tag="CBG_09743" /standard_name="CBG09743" /product="Protein CBG09743" /note="contains similarity to Pfam domain PF06979 Protein of unknown function (DUF1301) contains similarity to Interpro domain IPR009724 (Protein of unknown function DUF1301, TMEM70)" /note="Predicted" /db_xref="GOA:A8X8D3" /db_xref="InterPro:IPR009724" /db_xref="UniProtKB/TrEMBL:A8X8D3" /protein_id="CAP28894.2" /translation="MGVKGAKILSLSSSVAGAVMVPVLSSYLWEAAAEKPTMMMFAIV ANTFLVLLSFTPLLLHFLAKRFPIDIFYNNDKKLYTTIHYNFLMQKQALRFSAADVVD AAIAPEMKKVWIPLATAFVGKRPLLISLDRNAYLDKLAFDDLTKNVHIPANHD" CONTIG join(complement(CAAC03000978.1:1..17342),gap(156),complement (CAAC03000977.1:1..25642),gap(770),complement (CAAC03000976.1:1..5820),gap(42),complement (CAAC03000975.1:403..14375),complement(AC084473.1:28468..29005), complement(CAAC03000974.1:1..59511),gap(131),complement (CAAC03000973.1:1..10680),gap(405),complement (CAAC03000972.1:1..27087),gap(1279),complement (CAAC03000971.1:1..21082),gap(10),complement (CAAC03000970.1:1..5325),gap(405),complement (CAAC03000969.1:1..52885),gap(363),complement (CAAC03000968.1:1..4782),gap(1513),complement (CAAC03000967.1:1..8969),gap(807),complement (CAAC03000966.1:242..34628),complement(AC084477.1:32479..34005), complement(CAAC03000965.1:1..90123),gap(3878),complement (CAAC03000964.1:1..88885),gap(149),complement (CAAC03000963.1:1..14302),gap(4482),complement (CAAC03000962.1:1..86460),gap(790),complement (CAAC03000961.1:1..114067),gap(10),complement (CAAC03000960.1:1..11158),gap(428),complement (CAAC03000959.1:1..55251),gap(445),complement (CAAC03000958.1:1..135828),gap(1000),complement (CAAC03004531.1:1..35965)) //