LOCUS HE600996 727881 bp DNA linear CON 17-SEP-2015 DEFINITION Caenorhabditis briggsae AF16 supercontig from assembly CB4, cb25.fpc1402b. ACCESSION HE600996 CAAC03000000 CAAC02000476 VERSION HE600996.1 DBLINK BioProject:PRJNA10731 BioSample:SAMEA3138181 KEYWORDS . SOURCE Caenorhabditis briggsae ORGANISM Caenorhabditis briggsae Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 727881) AUTHORS Howe K.L. CONSRTM WormBase Consortium JOURNAL Submitted (03-OCT-2011) to the INSDC. WormBase group, European Bioinformatics Institute, Cambridge, CB10 1SA, UNITED KINGDOM. REFERENCE 2 (bases 1 to 727881) AUTHORS Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R., Waterston R.H. TITLE The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics JOURNAL PLoS Biol. 1(2), E45-E45(2003). PUBMED 14624247 REFERENCE 3 (bases 1 to 727881) AUTHORS Ross J.A., Koboldt D.C., Staisch J.E., Chamberlin H.M., Gupta B.P., Miller R.D., Baird S.E., Haag E.S. TITLE Caenorhabditis briggsae recombinant inbred line genotypes reveal inter-strain incompatibility and the evolution of recombination JOURNAL PloS Genet. 7(7), E1002174-E1002174(2011). COMMENT Details of C.briggsae assembly version CB4: To improve upon the C. briggsae nuclear genome assembly CB3, 167 AF16/HK104 advanced-intercross recombinant inbred lines were successfully genotyped at 1,032 single nucleotide polymorphism (SNP) markers. The resulting data were used to estimate high-density genetic maps. Sequences were assembled by combining the physical and genetic positions of the SNPs to inform the process of ordering and orienting the cb25 supercontigs into chromosome assemblies. 37 of the cb25 fingerprint contigs were split into 100 supercontigs to resolve discrepancies between the physical and genetic orders of SNPs. 638 sequence supercontigs comprise the CB4 assembly. The total nuclear genome content decreased from cb25 to cb4 because of the removal of three supercontigs containing mitochondrial genome sequence (totaling 20.1 kbp). Assembly_name: CB4 Assembly_program: Phusion Seq_technoloy: capillary (whole-genome-shotgun) Seq_coverage: 10x Annotation details: Coding seqences below are the result of integration and manual review of the following data : computer analysis using the programs Genefinder (version 980506; P. Green, unpublished data), FGENESH (Salamov and Solovyev 2000), TWINSCAN (Korf et al. 2001), and the Ensembl annotation pipeline (Clamp et al. 2003); similarity to other proteins from BlastX analyses (http://blast.wustl.edu); sequence conservation with C. elegans using Jim Kent's WABA alignment program (Genome Research 10:1115-1125, 2000); individual C. briggsae GenBank submissions; and personal communications with C. briggsae researchers. tRNAs are predicted using the program tRNAscan-SE (Lowe, T.M. and Eddy, S.R., 1997, Nucl. Acids. Res., 25, 955-964). FEATURES Location/Qualifiers source 1..727881 /organism="Caenorhabditis briggsae" /strain="AF16" /mol_type="genomic DNA" /note="supercontig cb25.fpc1402b" /db_xref="taxon:6238" assembly_gap 3496..3642 /estimated_length=147 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(5717..5835,6708..6948,8515..8779, 10242..10626,10721..11023,11826..12399,13069..13347, 14621..15250,16096..16194,16260..16301)) /gene="Cbr-pmr-1" /locus_tag="CBG_07921" /standard_name="CBG07921" /product="Protein CBR-PMR-1" /note="C. briggsae CBR-PMR-1 protein; contains similarity to Pfam domains PF12710 (haloacid dehalogenase-like hydrolase) , PF00690 (Cation transporter/ATPase, N-terminus) , PF00689 (Cation transporting ATPase, C-terminus) , PF00122 (E1-E2 ATPase) , PF00702 (haloacid dehalogenase-like hydrolase) contains similarity to Interpro domains IPR008250 (ATPase, P-type, ATPase-associated domain), IPR006069 (ATPase, P-type cation exchange, alpha subunit), IPR004014 (ATPase, P-type cation-transporter, N-terminal), IPR001757 (ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter), IPR018303 (ATPase, P-type phosphorylation site), IPR006068 (ATPase, P-type cation-transporter, C-terminal), IPR006413 (ATPase, P-type, calcium-transporting, PMR1-type), IPR005834 (Haloacid dehalogenase-like hydrolase), IPR000695 (ATPase, P-type, H+ transporting proton pump)" /note="Predicted" /db_xref="GOA:A8X5D4" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR004014" /db_xref="InterPro:IPR006068" /db_xref="InterPro:IPR006413" /db_xref="InterPro:IPR008250" /db_xref="InterPro:IPR018303" /db_xref="InterPro:IPR023214" /db_xref="InterPro:IPR023298" /db_xref="InterPro:IPR023299" /db_xref="InterPro:IPR036412" /db_xref="UniProtKB/TrEMBL:A8X5D4" /protein_id="CAP27845.2" /translation="MNGSTAVANGGSGKHDKEAPQATAAIFRVQGNTVATVPVAVNNS GVHQPSTPLVKAEVSTNHISIINRKKSLKDDIMIETLTSEQAASHEVVPCTHQLRTNL EEGLTTAEATRRRQYHGYNEFDVGEEEPIYKKYLEQFQNPLILLLLASAFVSIVMKQY DDAISITVAVVIVVTVGFVQEYRSEKTLEQLTKLVPPTCHVLRDGKEAMMLARELVPG DVVLLNTGDRIPSDLRIAESFSLQIDESSLTGETEPKHKETRAVPQATLGTGSDVEHL TCIAFMGTLVCAGRGRGIVISTAANSQFGEVVKMMMGEESPKTPLQKSMDDLGKQLSI YSFGVIAVIFLIGMFQGRNVVDMFTIGVSLAVAAIPEGLPIVVAVTLAIGVMRMAKRR AVVKKMPAVETLGCVTVICSDKTGTLTKNEMTAQSIATPEGKVAEVTGIGYSADGGAV QYQGELVQQWTHPEFARIIEAGIVCNNASIEQDKLIGQPTEGAIVVLAKKAQLEGVRG QYKRLREMPFSSDTKWMGVQCADAQGQTVYFIKGALDRVLDQCGTYYSADNQRKPCDQ YSRQHILEIGKELGLKGLRVLGLARGESMQSLMFVGMIGMMDPPRPGAADAISIVKAS GVDVKLITGDAMETAQSIGQSLGILSSSDSCLSGQQVDQMTDQDLELVIRQVTVFYRA SPRHKLKIVKALQSLGEVVAMTGDGVNDAVALKKADIGVAMGICGTDVCKEAADMILC DDDFSTMTAAIEEGKAIYHNITNFVRFQLSTSVAALSLIAASTMFKFDNPLNAMQILW INIIMDGPPAQSLGVEPVDDDIIRQRPRNTKQPMLTGRLIGDILASAAIIVVGTLSVF YKEMSADNKVTPRDTTMTFTCFVLFDMWNALSCRSSRKMIWQIGIRRNRMFCIAVSAS LICQLLVIYWSPLQHIFQTEALSLFDLIFLTTITSTVFIFNETRKYFNLRSKSLNHDP LSVSGI" assembly_gap 7529..7794 /estimated_length=266 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 18325..18599 /estimated_length=275 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(27395..27493,30618..30700,31579..31648, 31869..32057,34044..34140,34998..35227,36512..36636, 36739..37138,37542..37685,37727..37793,37871..37899)) /gene="Cbr-smu-1" /locus_tag="CBG_07923" /standard_name="CBG07923" /product="Protein CBR-SMU-1" /note="C. briggsae CBR-SMU-1 protein; contains similarity to Pfam domain PF00400 WD domain, G-beta repeat contains similarity to Interpro domains IPR006594 (LisH dimerisation motif), IPR006595 (CTLH, C-terminal LisH motif), IPR001680 (WD40 repeat), IPR020472 (G-protein beta WD-40 repeat)" /note="Predicted" /db_xref="GOA:A8X5D5" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR006594" /db_xref="InterPro:IPR006595" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR020472" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:A8X5D5" /protein_id="CAP27846.1" /translation="MASIEIESSDVIRLIEQFLKESNLHRTLAVLQEETNVSLNTVDS IDGFCNEITSGNWDNVLKTVQSLKLPAKKLIDLYEHVIIELVEMRELATARLVARQTD PMILLKQIDPDRYSRLESLINRPYFDSQEVYGDISRDKRRNVIAQTISSEVHVVAPSR LLSLLGQSLKWQLHQGLLPPGTAIDLFRGKAALKEQIEERYPTMMARSIKFSTKSYPE SAVFSPDSNYLVSGSKDGFIEVWNYMNGKLRKDLKYQAQDNLMMMDAAVRCMSFSRDS EMLATGSIDGKIKVWKIETGDCLRKFDRAHTNGVCAVRFSKDNTHVLSGGNDHVVRVH GMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVWHGKTGECLSTFRVGTE DYPILNVLPIPKSDPPQMVVCNRSNTLYVVNISGQVVRTMTSGKRDKGDFISCILSPK GEWAYAIAEDGVMYCFMVLSASLETTLPVTERLPIGLVHHPHQNLIATYAEDGLLKLW TD" CDS complement(join(38698..38730,39285..39428,39970..40167)) /gene="Cbr-nlp-15" /locus_tag="CBG_07924" /standard_name="CBG07924" /product="Protein CBR-NLP-15" /note="C. briggsae CBR-NLP-15 protein ;" /note="Predicted" /db_xref="GOA:A8X5D6" /db_xref="InterPro:IPR040384" /db_xref="UniProtKB/TrEMBL:A8X5D6" /protein_id="CAP27847.2" /translation="MSCPSESASAFRLRPVGSLFFLNRPHEKRAFDSLAGSGFGAFNK RAFDTMAGSGFSGFDKRAFDSLAGSGFGAFNKRAFDSLAGSGFSGFDKRAFDSLAGQG FTGFEKRAFDTVSTSGFDDFKL" assembly_gap 58800..60517 /estimated_length=1718 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 63233..63453 /estimated_length=221 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(64433..64581,66080..66167,71016..71162,71494..71608, 71659..71753,72074..72228,72276..72390) /gene="Cbr-npr-14" /locus_tag="CBG_07927" /standard_name="CBG07927" /product="Protein CBR-NPR-14" /note="C. briggsae CBR-NPR-14 protein; contains similarity to Pfam domain PF10328 Serpentine type 7TM GPCR chemoreceptor Srx contains similarity to Interpro domains IPR019430 (7TM GPCR, serpentine receptor class x (Srx)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8X5D7" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8X5D7" /protein_id="CAP27848.2" /translation="MTSTNSSMTSSSSEFDDYDTSQIIGLQVKTNEEYEDIIADALWP NAVEQWFVFILGTMMVIGVVGNALVVVVVSTNKSMRNALNLVLMNLAIADLLILLFCL PLTVVNDVTKTFWFSAVFCKSVNFINNTSVYVSIMSLVFITCERWRAITYPLKSPFVR TRSVIAGIWLLAMFLSSPEPVTLHLAGARFVRPNFTTQWGTRCKESWSEEFQMNYQLV QTIFSFVLPLLVISVLCLHMVRTLHFSSNHLTVASRQISIRKKAVRMLCAVVMLFAIS NLPVHLYNIAL" CDS complement(join(74342..74656,75279..75665,75873..76022, 76330..76493,78146..78290,78992..79116,81976..82264)) /gene="Cbr-nhr-85" /locus_tag="CBG_07928" /standard_name="CBG07928" /product="Protein CBR-NHR-85" /note="C. briggsae CBR-NHR-85 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR001723 (Steroid hormone receptor), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /note="Predicted" /db_xref="GOA:A8X5D8" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR001723" /db_xref="InterPro:IPR013088" /db_xref="InterPro:IPR035500" /db_xref="UniProtKB/TrEMBL:A8X5D8" /protein_id="CAP27849.1" /translation="MDLSSTGSLPCHLPLSLLTNLQNSPTASSSSFASPPATSSAAPA LLIHSPSSAFRPVIPRHLQPSPSVDTFYMSAIQSLVVQTAPEDQFSEIGPSEGSTSSL VKDENASTSAGTILCQVCSDKASGFHYGVFACEGCKGFFRRSIQQKLTYRACTRVEDC LILRNNRNRCQCCRLKKCLAVGMSRDAVRFGRVPKREKARMFEEMQKTNVQSQKDQIA IQYENLSEVMHKMNQAFITLQTTLEKCTGPIYSDRCPITSNFIVIPLKAAIDFANQIP AFLSISQADRVHLLQNSVFDVMLLASATSITSPGSPQFPPGGLSYDQQSSTSNSLIPQ IIQSISDRIRQLPPQAIPILTAIAVCQADIMPDCQQPSLLSNQLWAVLGKVGGVNPLL IGPSLFKDIRSLRQWHNARLRQVSQIPQPHFHPNQLLLGFQQPQQPVYLPPAFLSPPA STSTLSQSSIKSEYIERHQSIAAMLERPRRISTGVPEPLNLTLPPPLGRLPVKVEEPD EELAVTDSESKPSVFE" assembly_gap 79740..79887 /estimated_length=148 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(86032..86064,86988..87083,87134..87231,87484..87553) /gene="CBG26558" /locus_tag="CBG_26558" /standard_name="CBG26558" /product="Protein CBG26558" /note="Predicted" /db_xref="GOA:B6IGZ2" /db_xref="InterPro:IPR009564" /db_xref="UniProtKB/TrEMBL:B6IGZ2" /protein_id="CAR99172.1" /translation="MPGNQPRRSTAIVTFSGPHLFLLLILPIAAYCQSKKKFEADGRA DLIPRKPPIPAPTPPKDDNNSVSSIQAAPHVQNVKSLPPEKSDAPTSGKMKKKK" assembly_gap 88535..89804 /estimated_length=1270 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(90167..90457,90507..90569,90614..90689,90861..91294, 91339..91426,91478..91700,91749..91994,92529..92597, 92640..92790) /gene="CBG07930" /locus_tag="CBG_07930" /standard_name="CBG07930" /product="Protein CBG07930" /note="contains similarity to Pfam domains PF08277 (PAN-like domain) (2), PF00024 (PAN domain) contains similarity to Interpro domains IPR006583 (PAN-3 domain), IPR003014 (PAN-1 domain)" /note="Predicted" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR006583" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:A8X5D9" /protein_id="CAP27850.1" /translation="MRYRLLIPILTLFLIETNASDAEYKFVVVEGEPVTLNASESVQV ASFDECTDKCEQKTECVLAYQSNSSDPCYLFDWNSITQIIKNESGGNGTTAFKVYTDQ PACELNSAYLLNGKTYPLFPNDTAQNLWRIDTSEDGWTITYIDSKPIDSLVCGNFSYN RPYDDGCNPECNITMVQVWAKFGPLTKFLTKDAGWEYEPPAGNMYRRNGINKTAETFE ICMYKCHEDLRCAAAYFDRDNATCVMVWTGDFWFLERTSASDGHQIAIKLPMNDKLCK MTTDQLLDDQYYLSSPAMLTTFDRQFFRVQTTEKYYVFTSYLDYYESFYFNMINGCPV NNRASALRKDYYQGVQYTAYNHFFNETMCYRYDEAPGITQAEAKELCQLMGQKLLSDK YAGSIQMIAEQKEDLQVVDFQETMFDLFRLGFYKNSSRIWHGLEKDPADGKWKWLDTR FVQFPEDALPIPWAPGEPKEGPDMNCAYMGWGEGYDPFNGYAYYAAPCNSTVDGIACS SAQVNEMNIKKWSEVADDFGYRGTCCIRPVGWINEYPE" CDS complement(join(93760..93997,95209..95716,95835..95922, 95974..96356,96398..96473,96524..96586,96637..96927)) /gene="CBG07931" /locus_tag="CBG_07931" /standard_name="CBG07931" /product="Protein CBG07931" /note="contains similarity to Pfam domains PF08277 (PAN-like domain) (2), PF00024 (PAN domain) contains similarity to Interpro domains IPR006583 (PAN-3 domain), IPR003014 (PAN-1 domain)" /note="Predicted" /db_xref="InterPro:IPR006583" /db_xref="UniProtKB/TrEMBL:A8X5E0" /protein_id="CAP27851.2" /translation="MRYRLLIPILTLFLIETNASDAEYKFVVVEGEPVTLNASESVQV ASFDECTDKCEQKTECVLAYQSNSSDPCYLFDWNSITQIIKNESGGNGTTAFKVYTDQ PACELNSAYLLNGKTYPLHPNDTAQNLWRIDTAEDGWTITYIDTKPSENLICGNFTHN RPYKDGCDPKCLITMVQLLAVPGPLTDISYDDNMTTWNECLYHCHRTPSCLVVYFNPE LTPMCRTFTGERIFFLNRTEASEMGGQHLALKLPLSNKSCSYTTEELLNDKYYYPNNR ILQFFDRTFFRIRTTPKYYKISIYQDETVKHNPRGPGCEMNYQISVMYNDDKDGKNLP DPNPILCNRIKKAPGITADAAREICNEWDGELATERFFGYFNPCTVTAAQLLCDANES YGWQYGISCAPGTPRMWVGVRKNNVTQQFQWARPDWASTTNSKIYTCKFPKEDPGGPW FMNKVEYTWAPGQPDNSPGNDCGYVQIEKNITNWPGYGLYSSKCDVGGTHGFVCQTLR QMDKGIPKFMDILNEYGQDPAKIQQHPYKIQTKYDPGYGP" tRNA complement(97275..97346) /gene="CBG28953" /locus_tag="CBG_28953" /standard_name="CBG28953" /product="RNA transcript CBG28953" /note="C. briggsae predicted tRNA" CDS join(98593..98672,99676..99860,99909..100090, 100782..101158,101772..102022,102532..102602, 102721..102982,104268..104482,104551..104677, 104728..104786,104859..104975,105526..105671, 106076..106254,106424..106537,106934..107155, 107540..107637) /gene="Cbr-ptr-17" /locus_tag="CBG_07932" /standard_name="CBG07932" /product="Protein CBR-PTR-17" /note="C. briggsae CBR-PTR-17 protein; contains similarity to Pfam domains PF12349 (Sterol-sensing domain of SREBP cleavage-activation) , PF02460 (Patched family) (2)contains similarity to Interpro domain IPR003392 (Patched)" /note="Predicted" /db_xref="GOA:A8X5E1" /db_xref="InterPro:IPR000731" /db_xref="InterPro:IPR003392" /db_xref="UniProtKB/TrEMBL:A8X5E1" /protein_id="CAP27852.2" /translation="MIFKFRAAPLEKPWSKIVAKYCLFVARHPWPFIIIPFIITICLS MGIILNFKIVRGVNYLYAPLNATWKSEEAVFGENWAKDDDHFYPGKDILRRQGIYLIV NAKDSGNILRENHAKDFLKILEWIGSVKLISSAGRIFTYKDVCLHFQNDCFSNTHAKL LADIYSKNHQNSMFNISFPIYRSTYATEPIDISKVLGNVSLDSNGHVESASAWMILYQ LKAFGPANGQLSKDFEDGLAEKIQKGETPSELLNIYYFHSATFDEELEKENRRLTPKF SITFSVLIIFAILSTFTIKFVSFKTNQSVSNWPIIDWVLSKPLLGVCGVLVTLCAIIS STGLLMLMDVTFVDMCTVMPFLSLTIGIDDTFLMLAAWHETDRNLPYEKRIEKSMRHA AVSISITSLTDALAFIIGSIAPLPAVMYFCYYSSAAILFIFLYCLTMFVAFLALQGKR EQELRHSVTGGKTRDLEDYESAASHELLFKMGSRITVKADEENNNNNNEKSSENAETA SENEDVRMWYQKFFEDQYAPFVSDSKISILSFLFLDYKDYKNYKNYISSSSILSKRAP PLSFPRSPSKPISRGYKNYGHCCDEFSEFHKFRREISSTWCSEGRNSTQFWFFEMQTY LSQLGFGGDLNRTLNSDRKLSQTKKTFLMSNEKFGYDVLDSKKFRLSTRLKNVDNDEQ ISNCAKTMRLLTEKHQNYSMTTYSPLWNIADEYDIMWPQTLQDIYISIAVMIPVALLF IPQPLCSLIIGLNIASIAFGVIGTMSFLGVSLDATSMITVAMSVGFSVDFAAHVSYAY MTESRLPKNGKSPIFSRFSHTLGTVGWPVTQASVSVLLGVSSLYLVDSYVVQTCFRTV LLVILFGTTHALVFLPLLLMNCHRIYAFLSKNSDSENS" CDS complement(join(107760..107852,108133..108213, 108260..108332,108597..108811)) /gene="CBG07933" /locus_tag="CBG_07933" /standard_name="CBG07933" /product="Protein CBG07933" /note="contains similarity to Pfam domain PF01479 S4 domain contains similarity to Interpro domain IPR002942 (RNA-binding S4)" /note="Predicted" /db_xref="GOA:A8X5E2" /db_xref="InterPro:IPR002942" /db_xref="InterPro:IPR036986" /db_xref="InterPro:IPR039167" /db_xref="UniProtKB/TrEMBL:A8X5E2" /protein_id="CAP27853.2" /translation="MLISLLPRFARCTRFASTTSALLKEKKSTSSSAKNVEIGDDGLP KDYKLKTLRAGSRRLDTFVNRATGQSSSEVIKLIMQGKVRVNDEVFTKKAYNICQDDV IEVWKSPFADNAALANVERTEIVSYEVTDQGYNFEVKSWKNFLSDNWRSSQ" CDS complement(join(108926..109111,109330..109960, 110271..110354,110406..110635,110684..110806, 111422..111721)) /gene="Cbr-selb-1" /locus_tag="CBG_07934" /standard_name="CBG07934" /product="Protein CBR-SELB-1" /note="C. briggsae CBR-SELB-1 protein; contains similarity to Pfam domains PF00009 (Elongation factor Tu GTP binding domain) , PF04950 (Protein of unknown function (DUF663)) contains similarity to Interpro domains IPR000795 (Protein synthesis factor, GTP-binding), IPR005225 (Small GTP-binding protein domain), IPR007034 (Ribosome biogenesis protein BMS1/TSR1, C-terminal)" /note="Predicted" /db_xref="GOA:A8X5E3" /db_xref="InterPro:IPR000795" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR007034" /db_xref="InterPro:IPR009000" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8X5E3" /protein_id="CAP27854.2" /translation="MTSLPSTSSESESLNIGVLGHVDSGKTTLTRRIAEMGSTSAFDA HVTSSGDGIRRNTLDLGFSTMTSSSGRRFALIDCPGHSGLIRAVLAASTVFDMAIVII DVLAGIQPQTAEHLLLASKFCPNRVIVVLNKCDLADSAKIAETLKKVKKGLKSMGVDE NSPIVEMSLAEEFFRPGWGFSRPPKVRPHNFRFSEMLENLKNALETRIFEPKRDTESE FLIAIDHCFAIKGQGTVLTGTVIRGILKLNAEIEFASLAERRRVKTLESWKQRVSHVA AGNRAAFLVSPSFDESRFSRCISGAPGALKPTTHVLATVDPIQFFRKSINSKSKIHVA VAFETVMAECQFLRDADSGEEFEVLPALLAPCQVLLIFEKSVFLPEDCSMPFMAARLE QQPGQGCRFAFCGEIFRKNAEILKRFSRKLRKGVVERIEKDGYSAICTGMFKAETNFE IFRNFQIITASGPRGTIEGAFGKSGKFRVTFPQKIDKIVQEKEEISLFLKKYHNDNRL ISYIPDDLK" CDS complement(join(112003..112158,112670..112849, 113056..113484,114122..114351,114439..114553)) /gene="Cbr-gale-1" /locus_tag="CBG_07935" /standard_name="CBG07935" /product="Protein CBR-GALE-1" /note="C. briggsae CBR-GALE-1 protein; contains similarity to Pfam domains PF07993 (Male sterility protein) , PF01370 (NAD dependent epimerase/dehydratase family) , PF08659 (KR domain) , PF01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) , PF02719 (Polysaccharide biosynthesis protein) contains similarity to Interpro domains IPR003869 (Polysaccharide biosynthesis protein CapD-like), IPR002225 (3-beta hydroxysteroid dehydrogenase/isomerase), IPR013968 (Polyketide synthase, KR), IPR001509 (NAD-dependent epimerase/dehydratase), IPR005886 (UDP-glucose 4-epimerase), IPR013120 (Male sterility, NAD-binding)" /note="Predicted" /db_xref="GOA:A8X5E4" /db_xref="InterPro:IPR005886" /db_xref="InterPro:IPR016040" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8X5E4" /protein_id="CAP27855.2" /translation="MHILVTGAAGFIGSHTVLELLESGYTVLCIDNFANAISDEHGNA ISLKRVAAITGKPVPFQNADVCDEAALEKVFAENKFDGVIHLAALKAVGESVAKPLQY YSNNLVASLNLIQMCLKYNVKNFVFSSSATVYGPPSELPITEKSQTGQGITNPYGQTK YMMEQILIDVGKANPEWNVVLLRYFNPVGAHKSGLIGEDPKGVPNNLMPYVSQVAIGK LPVLTIYGDQFDTVDGTGVRDYIHVVDLAKGHVKAFDRIKNVGNVGTEIYNLGTGVGY SVRQMVDALKKVSGRDIPVKVRERDYKLQKFPEKMTKFEPETIGVPRPGDVASVFCDP SLAQEKLGWRAENGLEEMCADLWNWQTKNPQGFSA" CDS complement(117058..117702) /gene="Cbr-prx-11" /locus_tag="CBG_07936" /standard_name="CBG07936" /product="Protein CBR-PRX-11" /note="C. briggsae CBR-PRX-11 protein; contains similarity to Pfam domain PF05648 Peroxisomal biogenesis factor 11 (PEX11)" /note="Predicted" /db_xref="GOA:A8X5E5" /db_xref="InterPro:IPR008733" /db_xref="InterPro:IPR026510" /db_xref="UniProtKB/TrEMBL:A8X5E5" /protein_id="CAP27856.2" /translation="MVNSTTLAHLNTNIDHLSTVLSSYAGRDKAIRSLAFYLQLRSTT SSESSKEILALAKQLSAARLVSRQFNHPSMLKSCRQIWQAFDSGRIGDPLEFFTGAAV TGIYTVYGVVELLAWLSDAKLLGFESARLYKWCLYLWLSALINGIIRQIRIIYRKGIE KSQEDVLTLIGLSSDFISGLNGLPHKFLWAGKLSMRQSATFSLLASIIGFHKLW" CDS complement(join(118898..119257,119669..119856, 120070..120262)) /gene="Cbr-eif-6" /locus_tag="CBG_07937" /standard_name="CBG07937" /product="Protein CBR-EIF-6" /note="C. briggsae CBR-EIF-6 protein; contains similarity to Pfam domain PF01912 eIF-6 family contains similarity to Interpro domain IPR002769 (Translation initiation factor IF6)" /note="Predicted" /db_xref="GOA:A8X5E6" /db_xref="InterPro:IPR002769" /db_xref="UniProtKB/TrEMBL:A8X5E6" /protein_id="CAP27857.1" /translation="MALRVDYEGSNDVGVFCTLTNSYCLVGIGGTQNFYSTLEAELSD LIPVVHTSINSTRIVGRLTVGNRHGLLVPNATTDQELQHLRNSLPDEVAIRRVDERLS ALGNVIACNDHVAIVHAEISAETEQALVEVLKVEVFRVSLAQNSLVGSYCALSSNGCL VAARTPPETQRELAALLQIPVVAGTVNRGSELIGAGMVVNDWVAFCGLDSTSTELSVV ESIFKLGEQGAPTSISNQLRDTLIESML" CDS join(120798..121376,121697..121951) /gene="Cbr-pbs-2" /locus_tag="CBG_07938" /standard_name="CBG07938" /product="Protein CBR-PBS-2" /note="C. briggsae CBR-PBS-2 protein; contains similarity to Pfam domain PF00227 Proteasome subunit contains similarity to Interpro domains IPR001353 (Proteasome, subunit alpha/beta), IPR016050 (Proteasome, beta-type subunit, conserved site), IPR000243 (Peptidase T1A, proteasome beta-subunit)" /note="Predicted" /db_xref="GOA:A8X5E7" /db_xref="InterPro:IPR000243" /db_xref="InterPro:IPR001353" /db_xref="InterPro:IPR016050" /db_xref="InterPro:IPR023333" /db_xref="InterPro:IPR029055" /db_xref="InterPro:IPR035216" /db_xref="UniProtKB/TrEMBL:A8X5E7" /protein_id="CAP27858.1" /translation="MASADVKNTVPHMDMDRGGAFDFSNCIRNQAMCKLGAKAPKLTS TGTTIVAVAYKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACGAGTAADLDQVT KMLSGNLRLLELNTGRKARVITALRQAKQHLFNYQGYIGAYLLIGGVDPTGPHLYMCS ANGTTMAFPFTAQGSGSYAAITILERDFKTDMTKEEAEKLVQRALEAGMHGDNASGNS LNLVIIEPNETVFKGPIVPEFCKRPEPNDLAYKFQAGATKVLKHKTIKYDVVESMDLS H" CDS join(123110..123802,123849..124369,124426..124558) /gene="CBG07939" /locus_tag="CBG_07939" /standard_name="CBG07939" /product="Protein CBG07939" /note="contains similarity to Pfam domains PF00091 (Tubulin/FtsZ family, GTPase domain) , PF03953 (Tubulin C-terminal domain) contains similarity to Interpro domains IPR002452 (Alpha tubulin), IPR002453 (Beta tubulin), IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase domain), IPR004057 (Epsilon tubulin), IPR002967 (Delta tubulin), IPR018316 (Tubulin/FtsZ, 2-layer sandwich domain), IPR017975 (Tubulin, conserved site)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X5E8" /db_xref="InterPro:IPR000217" /db_xref="InterPro:IPR002452" /db_xref="InterPro:IPR003008" /db_xref="InterPro:IPR008280" /db_xref="InterPro:IPR017975" /db_xref="InterPro:IPR018316" /db_xref="InterPro:IPR023123" /db_xref="InterPro:IPR036525" /db_xref="InterPro:IPR037103" /db_xref="UniProtKB/TrEMBL:A8X5E8" /protein_id="CAP27859.1" /translation="MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG ESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYA RGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYG KKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVE RPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISA EKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIK TKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYK FDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADSNEGGEEEGEEY" CDS join(124884..125023,125622..125863,126533..126614, 127326..127530) /gene="CBG07940" /locus_tag="CBG_07940" /standard_name="CBG07940" /product="Protein CBG07940" /note="Predicted" /db_xref="GOA:A8X5E9" /db_xref="InterPro:IPR000836" /db_xref="InterPro:IPR029057" /db_xref="UniProtKB/TrEMBL:A8X5E9" /protein_id="CAP27860.2" /translation="MSSLPRVGDEEEGVGQLITDLQEKGTNFVLLQKTPQILELQTIL KDRTTNHSDFVFNADRLMRLVIEECLNHLPFTEHTVTTPTGFRYEGIQFNRGNCGVSL CRSGEAMEVSLRQCCRCIRIGKILIGDEQKVLYARLLPDIQSRRVLLLYPTIGSGTTV CKAIEVLKEARVPDENIYLVSLFISPTGLKNITRKYPYITVVASDITSLYPNHFSTSY FGAV" CDS join(129825..129867,129962..130216,130856..131019, 131390..131505,132250..132353,132405..132479, 132822..132913,133532..133627) /gene="CBG07941" /locus_tag="CBG_07941" /standard_name="CBG07941" /product="Protein CBG07941" /note="Predicted" /db_xref="GOA:A8X5F0" /db_xref="UniProtKB/TrEMBL:A8X5F0" /protein_id="CAP27861.2" /translation="MRVNHYVMVFCLIFGILANIYVIVKLNIGTNLFEYLQKIQMSNI QRDTVPKCEIDADHLLNFIENRHFLELEEKEQRKIPKNHEKTLQTMLFAFPTAGLGNK LFEIISLLGIADTLQRTPVINATNSDYINVLSKSIQPIFPKLVEEFDLKIIPSFKYFH HIRPKIRELLAPSKLTAVRAEILLPTKYRNDFIICTHIRRGDFQYDGVHQPSDATFTR SATDFLVDYYKKSRRRVTVVVLGNDIHFAKAVFEAPSSTFGWWLSYLSKRKSQAYYRD ITESKDGVLREMREDDFYPPEWIKLKTDQKTGKIRKIR" CDS join(133812..133880,133939..134207,134729..134870, 135390..135635) /gene="CBG07942" /locus_tag="CBG_07942" /standard_name="CBG07942" /product="Protein CBG07942" /note="Predicted" /db_xref="GOA:A8X5F1" /db_xref="UniProtKB/TrEMBL:A8X5F1" /protein_id="CAP27862.1" /translation="MSSITQGKGGGARAVTEQKIFETTSIAFSSVMIFLSLLILLLNY HLSRRVLARKKHPTVRKLRKMLIKGRAAVKTGMLTPIETVILALEAGMTLEEVRMEYV NSCASKNDILESIFGSVPANQFFARFVSSSRFMETGLANEKVFLDLWKSESYRELVLT TQHPECPTQTFQPSRQQDSLISQSTQNKPPTDTKTDNTSQAPPTCQEKPKTVRKSIID KTAAAILHEGKPLLCSGNNDDAV" CDS join(136983..137102,137392..137582,138560..139234, 140030..140294,140973..141323,142090..142386, 143227..143361) /gene="CBG07943" /locus_tag="CBG_07943" /standard_name="CBG07943" /product="Protein CBG07943" /note="contains similarity to Pfam domains PF01756 (Acyl-CoA oxidase) , PF02770 (Acyl-CoA dehydrogenase, middle domain) contains similarity to Interpro domains IPR006091 (Acyl-CoA oxidase/dehydrogenase, central domain), IPR012258 (Acyl-CoA oxidase), IPR002655 (Acyl-CoA oxidase, C-terminal)" /note="Predicted" /db_xref="GOA:A8X5F2" /db_xref="InterPro:IPR002655" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR009100" /db_xref="InterPro:IPR012258" /db_xref="InterPro:IPR029320" /db_xref="InterPro:IPR036250" /db_xref="InterPro:IPR037069" /db_xref="UniProtKB/TrEMBL:A8X5F2" /protein_id="CAP27863.2" /translation="MVQNLNKNIQEGDNPDLTSERLTSTFNTNDMAAQIWGSEKRARR RREISAKIAQMPELHDSKPLPFMTREEKIMESARKLTILTEKMGQIIDPTDPAELYHL NNEVLGLEGNPMALHGVMFIPALSAQASDEQQAKWLPRALRREIIGTYAQTELGHGTN LQNLETTATYDLATQEFVLHTPQITALKWWPGNLGKSSNYAVVVAHMIIKAKNYGPHP FMVQLRDEKTHEPLPGITIGDIGPKMAYNIVDNGFLGFNKYRIPRTNLLMRHTKVEAD GTYIKPPHAKINYSAMVHVRAYMLTGQAIMLASALNIATRYSSVRRQGQIDKSQPEVK VLEYQTQQHRLFPSIARAYAFQFAGAETVKLYEHVLKEMKSGNVSLMADLHALTSGLK SVVTYQTGEGIEQARMACGGHGYSMASYISEIYGVAIGGCTYEGENMVMLLQLARYLV KSAALVKSGQSSKLGPLVAYLGVKSEPTSLIDRIPNSGFTEYVKTFQHVSKRQTLKAA DMFFGLMEKGEKREIAWNKCSVELNRLAFSQASRLHTRLFIVEAFVRRVNEIADIRIK EALTDLLHLHVNYELLDIASYALEDGFLSASQLDYIRDQVYLYLGKIRPNAVSLLDSW EFSDIELRSVLGRRDGNVYENLFKWAKSSPLNKTDVLPSVTQYLKPMMEKARL" CDS join(143529..143636,143677..143867,143925..144085, 144642..145155,145530..145794,151205..151540, 151595..151870,152088..152157,152203..152294, 152490..152573,152661..152795) /gene="CBG07944" /locus_tag="CBG_07944" /standard_name="CBG07944" /product="Protein CBG07944" /note="contains similarity to Pfam domains PF01756 (Acyl-CoA oxidase) (2), PF02770 (Acyl-CoA dehydrogenase, middle domain) contains similarity to Interpro domains IPR006091 (Acyl-CoA oxidase/dehydrogenase, central domain), IPR012258 (Acyl-CoA oxidase), IPR002655 (Acyl-CoA oxidase, C-terminal)" /note="Predicted" /db_xref="GOA:A8X5F3" /db_xref="InterPro:IPR002655" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR009100" /db_xref="InterPro:IPR012258" /db_xref="InterPro:IPR029320" /db_xref="InterPro:IPR036250" /db_xref="InterPro:IPR037069" /db_xref="UniProtKB/TrEMBL:A8X5F3" /protein_id="CAP27864.1" /translation="MNQSIKPGDNPDLTDERLSGTFDTNAMAAVIYGSDKLAQRRREI SEAVSRIPELKDSKPYPFMTREEKILEGSRKSAVLNRLLPGLIDLESFEETVFIHQEV IGIEGYPLALHESLFIPPIATQGTDEQQEKWLMRAQRREIIGCYAQTELGHGSNLRAL ETTATFDISTREFILNSPTITSLKWWPGALGKSANWSIVIANLIIKEHNYGPHPFMVQ LRDEKSHEPLPGITVGDIGPKMAFNGADNGFLGFKNYRIPRENMLMRHSKVTSDGSYI KPPHAKIGYSSMVKVRSRMAAEQGLFLAHALTIAVRYSAVRRQGFLKDKSREVKVLDY QTQLHRLFPSIARAYAFIFCGFETIRLYDQLLIDVQNGNTSGMADLHALTSGLKSVVT YQTGEGIEQARMACGGHGYSMASYISEIYGVAIGGCTYEGENMVMLLQLARYLVKSIE MIQNGKSRELGPMVAYLAEKESEIDLNLGPNEYLKVFEYAARNQTWRATEKFQKLRNS GMSNEKAWNQASVELTRASRLHTRLYIMSTFINHVGSIVDQKVKGVLIDLLNVHVTYE VMDIGIYVQGLLSSNQMDLIRNQLYVSLETIRPNAVSLVDSFQISDMQLRSQVICAFL AAWDDFQTKHCIMVQRTRFKTYILQQISFNKIKFEESYELRYLAILVAVSLRVPYVND LCMDPRKFKTRQMLYHFVLGRRDGNVYENLFKWAKSSPLNQTDVLPSVTQYLKPMMDK SKL" assembly_gap 146808..147146 /estimated_length=339 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(147372..147506,148409..148701, 150296..150428)) /gene="CBG07945" /locus_tag="CBG_07945" /standard_name="CBG07945" /product="Protein CBG07945" /note="contains similarity to Pfam domain PF01756 Acyl-CoA oxidase contains similarity to Interpro domain IPR002655 (Acyl-CoA oxidase, C-terminal)" /note="Predicted" /db_xref="GOA:A8X5F4" /db_xref="InterPro:IPR002655" /db_xref="InterPro:IPR036250" /db_xref="UniProtKB/TrEMBL:A8X5F4" /protein_id="CAP27865.2" /translation="MFTLPPIQNINPNRVFWNARVARRIGEQFRDDPQPSLFQRIIQV GSLYFSRCTMVHPIGFDNIEHIDPAYIPPLRRAQREEAMMENLERVGMGMGYADRREV YIVPAQQHDDVEGILRNIPEVQATTLGEKITNSGITKQLRVLGRRDGNVYENLFKWAK SSPLNKTDVLPSVTQYLKPMMEKARL" CDS join(152967..153056,153099..153289,153344..153504, 153666..154179,154377..154641,155127..155462, 155660..155935,156854..156988) /gene="CBG07946" /locus_tag="CBG_07946" /standard_name="CBG07946" /product="Protein CBG07946" /note="contains similarity to Pfam domains PF01756 (Acyl-CoA oxidase) , PF02770 (Acyl-CoA dehydrogenase, middle domain) contains similarity to Interpro domains IPR006091 (Acyl-CoA oxidase/dehydrogenase, central domain), IPR012258 (Acyl-CoA oxidase), IPR002655 (Acyl-CoA oxidase, C-terminal)" /note="Predicted" /db_xref="GOA:A8X5F5" /db_xref="InterPro:IPR002655" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR009100" /db_xref="InterPro:IPR012258" /db_xref="InterPro:IPR029320" /db_xref="InterPro:IPR036250" /db_xref="InterPro:IPR037069" /db_xref="UniProtKB/TrEMBL:A8X5F5" /protein_id="CAP27866.1" /translation="MSENPDLTNERASGTFDTNAMAAVIYGSEKFAQRRREITEAISK IPEFQDSHPLVFMSREEKISEACRKLAVLSNYWNSLIDTSDEEEALHLYREVLGLEGH PLALHETMFIPSLIAQASDEQQEKWLGRAQRREIIGCYAQTEMGHGTNLRALETTATF DISTREFILNSPTITSLKWWPGALGKSANWSIVIANLIIKEHNYGPHPFMVQLRDEKS HEPLPGITVGDIGPKMAFNGADNGFLGFKNYRIPRENMLMRHSKVTSDGSYIKPPHAK IGYSSMVKVRSRMAMDQGLFLASALVIAVRYSAVRRQGYLEDKSREVKVLDYQTQQHR LFPSIARAYAFIFCGFETIRLYDQLLIDVQNGNTSGMADLHALTSGLKSVVTYQTGEG IEQARMACGGHGYSMASYISEYYGVAIAGCTYEGENMVMLLQLARYLVKSIEMIQNGK SRELGPMVAYLAEKESEIDLNLGPNEYLKVFEYAARNQTWRATEKFQKLRNSGMSNEK AWNQASVELTRASRLHTRLYIMSTFINHVGSIVDQKVKGVLIDLLNVHVTYEVMDIGI YVQGLLSSNQMDLIRNQLYVSLETIRPNAVSLVDSFQISDMQLRSVLGRRDGNVYENL FKWAKSSPLNKTDVLPSVTQYLKPMMDKSKL" CDS join(157161..157277,157337..157527,157573..157733, 158343..158856,159033..159351,159535..159870, 159924..160199,160684..160818) /gene="CBG07947" /locus_tag="CBG_07947" /standard_name="CBG07947" /product="Protein CBG07947" /note="contains similarity to Pfam domains PF01756 (Acyl-CoA oxidase) , PF02770 (Acyl-CoA dehydrogenase, middle domain) contains similarity to Interpro domains IPR006091 (Acyl-CoA oxidase/dehydrogenase, central domain), IPR012258 (Acyl-CoA oxidase), IPR002655 (Acyl-CoA oxidase, C-terminal)" /note="Predicted" /db_xref="GOA:A8X5F6" /db_xref="InterPro:IPR002655" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR009100" /db_xref="InterPro:IPR012258" /db_xref="InterPro:IPR029320" /db_xref="InterPro:IPR036250" /db_xref="InterPro:IPR037069" /db_xref="UniProtKB/TrEMBL:A8X5F6" /protein_id="CAP27867.2" /translation="MTALNKSIEPGDNPDLTEERASGTFDTNAMAAVIYGSDKFAQRR REISEAISKIPELADSAPLPFLDRFGKVTEGSRKLSVILENIDKLIDPSSYEEGLHLY TEVMGMEGHPLALHEVMFIPALIAQASDEQQVKWLGRARRREIIGCYAQTEMGHGSNL RALETTATYSPETQEFILHSPTITSLKWWPGALGKSANWAVVVANLTIRDKNYGPHPF MVQLRDEDSHEPLPGITVGDIGSKMAFNGGDNGFLGFRNYRIPREYLLNRHAKVEADG RYVKPPHAKINHSAMIRVRSHMATGQGALLAHALVIAVRYSAVRRQGYLEDKSREVKV LDYQTQQHRLFPSIARAYAFIFCGFETIRLYDQLLIDVQNGNTSGMADLHALTSGLKS VVTYQTGEGIEQARMACGGHGYSMVSLMTWNGECNLKYISKCASYISEIYGVAIAGCT YEGENMVMLLQLARYLVKSIEMIQNGKSRELGPMVAYLAEKESEIDLNLRPNEYLKVF EYAARNQTWRATEKYQKLIEKGESKDVAWNNCAVEMTRASRLHTRLYIMSTFINHVGS IVDQKVKGVLIDLLNVHVTYEVMDIGIYVQGLLSSNQMDLIRNQLYVSLETIRPNAVS LVDSFQISDMQLRSVLGRRDGNVYENLFKWAKSSPLNKTDVLPSVTQYLKPMMDKSKL " CDS complement(join(161407..161495,161650..161836, 162148..162241,162523..162788,163161..163379)) /gene="Cbr-scrm-6" /locus_tag="CBG_07948" /standard_name="CBG07948" /product="Protein CBR-SCRM-6" /note="C. briggsae CBR-SCRM-6 protein; contains similarity to Pfam domain PF03803 Scramblase contains similarity to Interpro domain IPR005552 (Scramblase)" /note="Predicted" /db_xref="GOA:A8X5F7" /db_xref="InterPro:IPR005552" /db_xref="UniProtKB/TrEMBL:A8X5F7" /protein_id="CAP27868.1" /translation="MNIQPGQQPLKSLISAESDDVTSSENSENENSQKKLVVRARAGR MRRGGPMPVARAEPICVPNQVAAMPIVMTGFVSLVPHTVLDAIALTNCLMVVQCTEPL EIFTGIETPNRYVVHDMYLRPMLFCNERSNFISRECCGSGRNFSMDIRDVFGAELMRC YRDNPCFSCTDYLGTQFQGQQIGLMKRECCDGHFNLLGAGCNQPLLIMSPCCASCGGT KIFPVCTYTGVKIGEIVRLYPGFLQEHLTDADTYLVHFPVDLPPILKLLLISSVFLID FTFFEDDN" CDS join(163571..163624,164200..164292,164951..165015, 165070..165167,165365..165438) /gene="CBG26559" /locus_tag="CBG_26559" /standard_name="CBG26559" /product="Protein CBG26559" /note="Predicted" /db_xref="GOA:B6IGZ3" /db_xref="UniProtKB/TrEMBL:B6IGZ3" /protein_id="CAR99173.1" /translation="MMLFIDFLFILNTFTMITGTIFIISFCTNPIKKKNEKCNVRSLT NSMRAKSEPKGAALPSSQGPQQAKSLQAKIPKSAKSCPVGPMATPKPSVSPVPHTPAV DTQSPRSVPMPNSSESKGLKSMPAF" CDS join(169515..169766,170606..170886,172097..172234, 172492..172507) /gene="CBG07950" /locus_tag="CBG_07950" /standard_name="CBG07950" /product="Protein CBG07950" /note="contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domain IPR001304 (C-type lectin)" /note="Predicted" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:A8X5F8" /protein_id="CAP27869.2" /translation="MGFLNLLGISLFLSLLISTVARDFGDDSSCDSSEEHGGHGNHGP RSPRPPSRPPVPGGPDNANRPKCGQGWFTSYRPQGIWCLRVGIGKMDYNGAIAQCATF GGVLSGVQNDWERWLLAQEANRQTLAYNVQYSGMWLGAQRNSESNTFYWTDGHTVGTE GLRFGSGQPDNENTAGRGPQNCLQLIALSPGYWNNPGKFASWTTSSGLLDDYWCIVTE EPSQRINFQN" CDS complement(join(173154..173316,173396..173452, 174558..174662,174708..174789,175047..175272, 175417..175478,176131..176933,177771..177844)) /gene="CBG07952" /locus_tag="CBG_07952" /standard_name="CBG07952" /product="Protein CBG07952" /note="contains similarity to Pfam domain PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B contains similarity to Interpro domain IPR001289 (CCAAT-binding transcription factor, subunit B)" /note="Predicted" /db_xref="GOA:A8X5G0" /db_xref="InterPro:IPR001289" /db_xref="UniProtKB/TrEMBL:A8X5G0" /protein_id="CAP27871.2" /translation="MRTPINVRNVDIVIRVRIVYDGIGRMRGISDAGAGPGPGTAEAQ GRANALHSKPVKGFYDHEKVRRMWLKEEEEGSMNAPSTSMPSAIPKKPDITTKAYIGP SKPILPRRNTQNGADLRAPGPYTHRPYCLGPAKPRVGYPNRKPIPIREIPVQKVEPDL DWSILDRLNRSIRSPTADDLNIPMHSRSPNPLTDDWNLLEAVASSEGPSEDATTSITL ESSVERNCTSPTAEFPVYDFLEGFDEFLNTKNLENSKISNVDLKNSQKSSPTNIAEAL QNVFANTYQTSSFSRNLPQRYTQRAAREKDRFPVNCNRVSPIDGSDDVAEDDGKPVPV NPRQFVRILRRREMRARQEDSGVIPVERQAYLYESRHQHALSRVRLSDGRFDPAARKN SGQPPTSEIVPTQPTLKRQYTPIRPAHSDQDPLPKPSEMYRTKGPQVPRLPTASIRAP VPGPSIVAQLRPTGNTRAPIQTAPRGTANIEIREESSEFLDSLNMLASEVTTTTLPES LESLLSGILEDFSQD" assembly_gap 183078..183102 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(183368..183413,183776..184836,185183..185360, 186105..186367,186536..186727) /gene="Cbr-rsy-1" /locus_tag="CBG_07953" /standard_name="CBG07953" /product="Protein CBR-RSY-1" /note="C. briggsae CBR-RSY-1 protein ;" /note="Predicted" /db_xref="GOA:A8X5G1" /db_xref="InterPro:IPR031937" /db_xref="UniProtKB/TrEMBL:A8X5G1" /protein_id="CAP27872.1" /translation="MDNWAAYHQAQPAENVDWAQLAQQWMAMRESGRPPQQQQQDYGH QNPPAPWHQNQNPRHHHFQQGPPGPPNYHQNTMPRHQNPQNFQNQDWGDWSSNDDQWN SGPPQGPPPPRGIAQHNFQDFRANQGPPPPQDTWRGHGQFSGRPGPPPGWSGPNPGYA GPPGPPIGHSGPNQSFSRPPGPPNPGFSGPPRAPQAPPPPPRPLFAAAAASEEAPPTF FGDSRPPQANPRPPPPPQLHFFQDAPRVKSHEQAPPPPPPPVGVPPPSGDFSIDKEAR KRLPAWILEGLEKAEREKQRQAEKEEKLRKAEEEKARRRAEAGKSKFDSSSDEEENGE DAEERNGNSRKFQEEIPDEREEDSEDDSEERREQFMRCVKSLMMNVLLETSNDTIMRI IQEEIRDFRNKERKIQKPAAPKIIGNSSALAALAAFGDGDDSDDDSDNQGPPPGRSDD VAGGSKGAEPSSRGISQECGEFKAPVGIPNHRKFSVKTDHCSSPSPPSNDGDVILVSE EKQPQRGKTNLEIEKNRIPKKRGKDEQKESKTVPKSRTASPSSFEIQKSFEVSRRPST ATATKIQKFGEKT" assembly_gap 185634..185933 /estimated_length=300 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(187425..187515,188845..189071, 189722..189958,191060..191284)) /gene="CBG07954" /locus_tag="CBG_07954" /standard_name="CBG07954" /product="Protein CBG07954" /note="contains similarity to Pfam domain PF02585 GlcNAc-PI de-N-acetylase contains similarity to Interpro domain IPR003737 (N-acetylglucosaminyl phosphatidylinositol deacetylase)" /note="Predicted" /db_xref="GOA:A8X5G2" /db_xref="InterPro:IPR003737" /db_xref="InterPro:IPR024078" /db_xref="InterPro:IPR039516" /db_xref="UniProtKB/TrEMBL:A8X5G2" /protein_id="CAP27873.2" /translation="MLPLLLLIFILFFVILLFFAVRSYPIPLLPQSRILLLIAHPDDE TMFFSPTIRALTNAGHRVFILSVSNGNFGGLGEIRARELSRAASKLGISSSDVICLDY DEFRDGDTWNRNALCQIVMRHVEVLSADTVISFDSYGVSGHHNHSSCFDALQTAYSNG GVPRDVQIFVLDSIPLWRKYIGMWDALFSFGRSPFFYMARFRDVAACWRAMWAHRSQF VWFRALFIVFSRYVYMNSLRRISPLPLTPSAPRNSQKFKFH" CDS complement(join(194550..194828,195083..195180, 196500..196620)) /gene="CBG07955" /locus_tag="CBG_07955" /standard_name="CBG07955" /product="Protein CBG07955" /note="Predicted" /db_xref="GOA:A8X5G3" /db_xref="InterPro:IPR009792" /db_xref="UniProtKB/TrEMBL:A8X5G3" /protein_id="CAP27874.2" /translation="MGDVTTTTSTTISQPSTLSGHALVTLDKIDTSNTAGFVKTVIGG TSLATLLLGIRSAWKHSRQPEAADLAAAQLFSGAAFAGKALGVATVITVSGFTLLIVG VSALLQVNTPRQFGAAMKTAFGDSIRLPQSANSQTFEEFIKSIETKTGVTEEEQKNGG KLSEN" CDS complement(join(196924..197016,198190..199584, 199666..199812,199971..200081)) /gene="Cbr-rsr-1" /locus_tag="CBG_07956" /standard_name="CBG07956" /product="Protein CBR-RSR-1" /note="C. briggsae CBR-RSR-1 protein; contains similarity to Pfam domain PF01480 PWI domain contains similarity to Interpro domain IPR002483 (Splicing factor PWI)" /note="Predicted" /db_xref="GOA:A8X5G4" /db_xref="InterPro:IPR002483" /db_xref="InterPro:IPR036483" /db_xref="UniProtKB/TrEMBL:A8X5G4" /protein_id="CAP27875.2" /translation="MDAGYFRGASSEQDGRFSDKEKKLLKTMKFEQQLEKKIDLTRIN MDVIKPWITARVNEILGIEDDVVVEYILSQLDEKDINPKLLQINVTGFLNARRAREFV GELWSLLIEANESEDGIPASLVNKKMAEMKTSDDRDSKEGVKEDNDWTNRYKTLSNGR YTGPAREKQVRDDRIPARALSPRKTPPRRNMSPEGGRRGSPGSPRRRGSPRRSPRRDD RRRSPPRRRSRSPRGGDRSRPARDEKEREEESKRREIERKKRHEEAELRRKAIASQAR RSKSPRGSPRRRSPRGRSPEARRRQSGSPPRGARKGSPEAKKPGRSPSGSPRGPRKLS GSPRRRAASPEARKPRRSPSGSPKRRQAFPAARRPPSGSPPRRRSPPAASKFGRSPPE SPRRRRSGSPAARKPGRSPSGSPRGARKGRSPSGSPGRRQKSPEVVRKRPPPPPARRR SPSSSPDARKPRGRSPARRGRSPSESPRRTRKSSSRSPRKFAEKKSSPVLPAQYRRRS GSSSPDAKRRRPNDNSDDSTDSEAEERRRKRAKKERKARKHKKKKLIFRKFQEKKSKK HRRRHASSTSGSGSD" CDS complement(join(201125..201256,202177..202317, 202746..203093,203871..204416,204624..204725, 205144..205269)) /gene="Cbr-ztf-6" /locus_tag="CBG_07957" /standard_name="CBG07957" /product="Protein CBR-ZTF-6" /note="C. briggsae CBR-ZTF-6 protein; contains similarity to Pfam domain PF00096 Zinc finger, C2H2 type contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR007087 (Zinc finger, C2H2)" /note="Predicted" /db_xref="GOA:A8X5G5" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR036236" /db_xref="UniProtKB/TrEMBL:A8X5G5" /protein_id="CAP27876.1" /translation="MGAETTPEQRVSEDLMQAVTCLKRVMNGMKHGNEVPEEEKQQNP TDVICTLEKLTGALERCMENNKTLNDVLSGKMKCTTCGSTSVGFLADCHDSATSTTTT TSHRSSEEPMPRRKNSEDMDDVDDGCSSLGSRSIRSVSSQEDDETTLVADMIKEGGAS KTVEEEEEEHDLVMKTILSTTTSTSSTTEIQKEDVRKDAEIPMTTDCNNTALFDQFLQ NSLLGLPDMKAMIDMPPTVSDENNEDENQESNALLSNFFQILFANNQNSVAGMEGGSS ETDSTSSQPSPPADLSQMDPSQFDTLAMLESLMAESLNPADATTSAENKAKKRKNTPI KVPKSENGGYVCPMEGCNKIFKEKGSVHRHFVTHIGMRFNCDKCKASYTQKHALMLHQ KIHLNPDAYQCRGCGTNYTTQNGLRLHRQRNPACMEHNTSATMSDFNSSLNDVLSLAT AQSTPTKQMVMAAP" CDS complement(join(225432..225516,225595..225709, 225948..226029,226545..226659,226717..226838, 226884..227012,227058..227147,227435..227587, 227635..227802)) /gene="Cbr-sri-5" /locus_tag="CBG_07959" /standard_name="CBG07959" /product="Protein CBR-SRI-5" /note="C. briggsae CBR-SRI-5 protein; contains similarity to Pfam domains PF10327 (Serpentine type 7TM GPCR chemoreceptor Sri) , PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) , PF10326 (Serpentine type 7TM GPCR chemoreceptor Str) contains similarity to Interpro domains IPR019429 (7TM GPCR, serpentine chemoreceptor class i (Sri)), IPR019422 (7TM GPCR, serpentine receptor class h (Srh)), IPR019428 (7TM GPCR, serpentine receptor class r (Str))" /note="Predicted" /db_xref="GOA:A8X5G6" /db_xref="InterPro:IPR019429" /db_xref="UniProtKB/TrEMBL:A8X5G6" /protein_id="CAP27877.2" /translation="MPSATWQCPAGPPNYYLTILHSIGFFSVPINFLCIYLVWFHTPK DSKFRYCLLYVQIVAFFVEIDMSWVCPGYYLFPMMGGYNIAITSKIFSGHQNTVALLG ITVVSVFGAFKFCFELPSLLLCFIYRQNAAADLDQKFKLNRYFINSVIATCHTFPFVI AFCLLESGLSHQEMLKIVATDWPKCMHVFENEGFVIYDPSGNFWSAAVGIAALAYISI FSLFGAFLGIHTMYILQKVRFHLSRQTYAVHRTAMINLGLQSLIPTVCIIIPFNFIFL VVYNDWWQFQEIATNTLFVMAAHSMVSSTVLILSNRRFRSLIVEKFENFSKPFLYTIP VEATTVRISPNTTILPRN" CDS complement(join(228962..229134,229593..229674, 229755..229979)) /gene="CBG07960" /locus_tag="CBG_07960" /standard_name="CBG07960" /product="Protein CBG07960" /note="Predicted" /db_xref="InterPro:IPR001024" /db_xref="InterPro:IPR036392" /db_xref="UniProtKB/TrEMBL:A8X5G7" /protein_id="CAP27878.1" /translation="MTEPLKEMGSSIRSKYDEDDTPASFTILIRTSSNSCSDGPVEKI SVMIRDDEGRATDKQALRYSHTHSTPFQKGHTDMFVMTNQPSLGPLTNFEIHYDGNKE PLGTPWKFHTVVIFHHENGRVYNFQTDEKQSSECVSVLICKDDGIQAMPIKLRDPFF" CDS join(<230819..230906,231292..231353,237449..237611, 238353..>238702) /codon_start=1 /gene="Cbr-clec-99" /locus_tag="CBG_07961" /standard_name="CBG07961" /product="Protein CBR-CLEC-99" /note="C. briggsae CBR-CLEC-99 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domain IPR001304 (C-type lectin)" /note="Predicted" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:A8X5G8" /protein_id="CAP27879.1" /translation="SKILIFLCFSILLGSLDARFSSSSSESCEGGGHHGGGGGGGGNN GGGGNNGCGSGWQRFNRPSGGWCIKVFRGEHTQSGAESRCQNVGARLTGVQSQSEIQY ITRSALNLISQSSGSVWLGARRTSQCSTSKLSTSCSSMNSFRWTDGSTTGTAGLIWNT NQPDNAHAQQQQCMVVLATRGSSVTDQWTWYGNRLDDVNCAGNVGENAVRTIRAYACG KRA" CDS complement(join(232718..232818,233300..234266, 234313..234822)) /gene="CBG26560" /locus_tag="CBG_26560" /standard_name="CBG26560" /product="Protein CBG26560" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IGZ4" /protein_id="CAR99174.1" /translation="MWNRDREEEPDFRLPEVPKSREEFEDRPEVPVQRSRGVPHILKK PRALTASSSRNLKTKLTKETSGLLQGQPLLPSYRRRSKVPPNYSAAIPYPPKWLKNLN HLPGASSCLQPSQSVVKKSNELSRTISTCAGDRFGQSMDYRAQEAHQEPFQMARSQKA SQQAKFAHRQKQPSGSIPGSEMIYQSSIQPRSSAPTHRDHPIETCPPRSPVKITRSKV RAQPRAPFTSKIAQFPGMHCESAATMTIVQKAMSVCNPSNLAQCKQKSLHGCEISQSL DKSMRNLNFAPNQHLGIYWGSSAAIVEQSQSETRQNEGPRCQNLGQQLHNQPGVSSNQ HRQGQASRCQKPVQQLYSDPGLSSTSYFPVVSSYHQNSYHHQQQHIQNLSGSSGSYQD LYRPVRAIPFDPYHRIHSATGSVSSSSDEFQDYGIEDPTTNIEDHGSRKRVFSRGTSS LSMASSTSQSPPKKPKRIRHRRKAKVEESSVELQPMRFENGINFESMKHWLEENVKPA VLESEIRKRDMARKFTK" CDS join(239879..239969,240017..240054,240100..240265, 241399..241754) /gene="Cbr-clec-93" /locus_tag="CBG_07963" /standard_name="CBG07963" /product="Protein CBR-CLEC-93" /note="C. briggsae CBR-CLEC-93 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domain IPR001304 (C-type lectin)" /note="Predicted" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:A8X5G9" /protein_id="CAP27880.1" /translation="MFKKHFLLLSLFFGIVAAGFSSSSSSESCEDDHRGGGGGGRPNG GCDAGWRRFTRPNGGWCIRSFGGRLTHASAEAQCQSYGATLSGLQNMEEARYATNSAL PLMSSSSGSLWLGAHRTNACNRQRVTTECTPQNSFRWTDGSTSGTAGFLWSQAQPDNA YDLKQDCIIILAARGPLTVKNVVWPENRLDDVDCALDSTEVSPRALAGYVCGKKAR" assembly_gap 243778..243956 /estimated_length=179 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 248859..249240 /estimated_length=382 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(256368..256610,256951..257352,257529..257662, 258117..258264,258403..258561,259027..259186, 266298..266482,267076..267329,267905..268261, 269254..269268,269288..269588,271039..271324, 272479..272729,273434..273656,274156..274649, 274748..274887,275952..276110,276360..276454, 276625..276768,277013..277032,277299..277856, 277928..278012,278171..278322,279301..279447, 279714..279908,285135..285231,299065..299089, 299221..299718,305033..305166,305303..305462, 305592..305829,308497..308973,309536..310056, 310839..311922,312647..313129,314022..314279) /gene="Cbr-hmr-1" /locus_tag="CBG_07964" /standard_name="CBG07964" /product="Protein CBR-HMR-1" /note="C. briggsae CBR-HMR-1 protein; contains similarity to Pfam domains PF02210 (Laminin G domain) , PF00054 (Laminin G domain) , PF00028 (Cadherin domain) (6)contains similarity to Interpro domains IPR001791 (Laminin G domain), IPR000152 (EGF-type aspartate/asparagine hydroxylation site), IPR006210 (Epidermal growth factor-like), IPR020894 (Cadherin conserved site), IPR013032 (EGF-like region, conserved site), IPR002126 (Cadherin), IPR012680 (Laminin G, subdomain 2), IPR012679 (Laminin G, subdomain 1)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X5H0" /db_xref="InterPro:IPR000152" /db_xref="InterPro:IPR000233" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001791" /db_xref="InterPro:IPR002126" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR013320" /db_xref="InterPro:IPR015919" /db_xref="InterPro:IPR020894" /db_xref="UniProtKB/TrEMBL:A8X5H0" /protein_id="CAP27881.2" /translation="MDFEKCEFELKILNFWGIFLDNIQTKFVFFQARTLINIPSTAPS GWLIGDLRFQNLIGNSENATLQNSIFSSYFEVENGDKIITNSTISQLRGELFELFLNV QEQNFHRLVTLHIYVEPPNQIAHLKKFLSTVYRSTVYTSQPPGTTVVFSKPISLENQG NSSNFQIAPISKTPGQFLVKPRGKSMEILMMKTSLESEDVGKHVFYLAALSDNQMIAQ TKIIVDIVDSGDVNFLLMSRKMIAKFATKIPENTTIYQVEKRNISEPLLFHLDQPSRF FEIDHFSGKVSTVLPVGYGIYHIRVVARNSKKQRSDAWLQIIVSGHLKNWEKSEIQKT SRSRRHLDDLIFRIPENSTMEEIERRKMKIPLFPGETIGEISVAKEWLKIDAEGKIRI LKPLNFEKTSSIIATVPINGLQSSRTQTIRIHVEDVDEPPSFVNSPLPMLAVVPLNPT IGRIIYQFVARDENGDGDSNVQYKEIDFRISAAGSFSVDSKSGVVRTGWSKYEKGETY RISIQAIDMTPSDNSTSQLSEVAILEILADERPPQFAKQEYEVAVSEDILVDYSVVDV KAQSFRSIEDGRSKGPITYSLESGDSSSSNEMKSFRIDPSTGIVHLTKELDYDDPALP KSHQFKVTAREDNRESHVALRIRIEDVNDNVPMFTRPLYTAQVREDIPLNQTILKGLL QLFQFWRKRAYHLFAGQSEFLNKRKWRDCAKIRLDADQYNERHFVYRFNVTARDHGTN QLSNTAMVHIRTENTNDESAVFLPTSHYTAFVAEDAQGGTPVIQIQARDADRDEVTYS FMDKNQRSTQTMNLFTIDQHTGLVKLRHGVTPIDLAEAENPINLTVIVEDDGSCCVYP SKTHASYATLLIGIEDVNNNKPEFPDCARYSEIAKIMEGTYKSDPPTIVKVEATDDDS SANGDIVYSLYYTQSESRKAFVIDRHTGVLTPSPHVVFDRETRPREDVTVKATDRGDR PLIGFCQFSVEVVDVNDNAPQFERPSYETSVSRFEAIGTSVITVFAFDNDAAHNAEIS YKLEVDTTAGEEHQNDIEFFELVNRRSGEITLIKPIPMRTQKFVFSVIADDNGVPESL ESTSQVILNVLDKQQKAPKWHSSPDCKPGITVAENVEMNKVILRCRATSSGDNKKSDV IYKLTASAGGHGNSKAESKFRQFNKFENGNEWVEVAIMEPLDYEQINNYTLTLTATVG DMTSHVASTKTFIVEVMDVNDVVPQFTVDLFTGTIDEEMTPNEYLEKMNGKPIVTVKA IDTDSDGPQNEVHYRIVGEANGEETKHFRVDELTGEIFPNEKFDREKVDMYILKVEAS DRSISALPGANGPNKDNVKVQIVINDVNDNAPSFEESKYIGRVKESEGEGHDVITIKA HDLDKRDMLLGSQMRSIEHTKQLFQQKNSDSNLRYHLIGSGGGRIPFGVRTDSGTIFV KEPLDFESADQYHLILIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVD VPKVLFNVRATDADQDEKSSRIVYRLEGQGAEEVFRIGKYSGMIELVKPLDRDPPTGV PSWNFVVQAIDDDGMGLVGYADVQVNVRDINDNSPIFPERLFGFIEENREPIHSDGVY FMDVQARDFDDPTTENANIEYGIVRNKLIDGEPVFRIDQNTGKIFRSLDREMASEREF IIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSA FDADEEAKDNVFTYQLAEESDYFYVTTDKDSKQSAVGVLRVKQRNLYVSNDNYTRIAP AEEEKEEISHHHFITFPSALKTTSEHHSTTRIRHNVTASRCGFASPTDDTMLKRRATW HSSIATTTRHTFTEPQSTESEKTCREEQSSDSTRRATRMPVTWQGKGGLWVTLLGLVA LMGCFIGHAEAFTDLSLPFGLEPSVAKSRFSSLVGGVRARDIHVFVMKNISEDTPVGT VLETFKAHDPSNPMYNFSFRINRQSDPKRQFTIDQDGTLRVAHSLDREDIAVYNLIIE AYDNSNNIGRQMVAVYLQDVNDNGPEPYTVPRPCIFRENTPVNQLGTCEIRATDRDTA EFGPPFTMEVSPNFKYSQYLNVVFNPNGDGGNGSMTITPLQEFDREAPVPGKILEIPL VLADRAGRRNEASVHVIIGDLNDNTMHDGRMTIHVNSYLGRLKQTVIGRVYVDDADDW DLGDKTFSWKDSRPGFELSDKGDITMAAEMAAGTYTMSANVHDNARDEDAVGYVTVIV NAVPQIAFDNQGSVQLLIAEETPLQLPDDFIRADSNGQSLMDTFKQEMVAYMGGDVTV DVFSVQVGIATLQTRDVPVLNVRFNARGNAYRDTAQLNGLIAAHRADLQRKLNVEIVG VGIDMCKFTQCDAGCQTLNSADYDGIVVSANSTVVVGVNATSRDDCTCPVWRAPPACQ HSLCHNDGVCHNTNPGFFCECRNDGLKGSRCQGTTRSFGGNGFAWYKPMPACTSLNIS FSFMTTQSDALLFYNGPLETQRNDTHIEYSDYIFIQLRGGRISLEVSMNGQSRSSLEV ASTALNDGTWHEISVNQEGKRVELVVDNCRFLGAGADDSSCRAELYTPDDDERLNIVT PVQIGGLAPLSGQDYPQTIPRGGLNGCIRNLYVNGDQYDLATPAFEQNTEKGCRLWGS TCDSNSVDSLNHCIHGDCFADVQGSGAMVAKCVCDPGWGGPRCERRMEWIQFAQGAFI EYSPKIAFPEQVSDIELLFISGKVNGAPAELSFGTDSQQSYVSTSLESGQNGVTAAGK FDIGSGGKRARQELRVSEVLLKENASYWLQFTRNPTRASLSIDNAYTVSTQLDKGEPF SLQVNQITLGTQGQNKGFQGCIGTYRWSKQNLPLKRGGALDENEESIVSIENMAGVRD GCDLRITCADLPTNYCGGSFACVDFWKGPFCTCNDGANAILGDDGQVVGCGETLAVSK LGISSPAIILIMVSIGLLFLLLALMVVYTRRSPAAFENVQPGDMNRDNLRPYAVEGGG EADNDQYSIAGLRKPVMPLDTGMGGGMGGVPPLYPPRGMMSHPPKDDMELNSKIKDLE SDQNAAPYDELRIYDDERDNISVVTLESIESAQ" assembly_gap 265095..265856 /estimated_length=762 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(315176..315406,316947..317091, 317146..317254,318085..318159,318211..318331, 318391..318477)) /gene="CBG07968" /locus_tag="CBG_07968" /standard_name="CBG07968" /product="Protein CBG07968" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X5H1" /protein_id="CAP27882.1" /translation="MAPAKRKLNFDNSADSTMNFEADDNFPRQWKIQGIDIDERIQRL RDELRAQGHHPAQNAVVDPNSKFRTEYRRILTAHSIITDAIRLNQKEISWYKNATEMM ANDIDALKFRREHLDKSVEDLKNQLSNLESSVGILKSQQLAVKSVLDLREDEYMGGDD VDSNYPDDYNKFGKISKLCEVALKSYDDVKKRTEQLQKTLMTERNRERRQRETILNGM DEKERTRVEELDEMFKDFSLDQLKALRDRMRIARQQN" assembly_gap 316017..316194 /estimated_length=178 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(318913..319058,319108..319200, 319461..319599,319746..319819,320033..320374, 321175..321329,321494..321635,322462..322620, 322866..322991,323769..323949,324176..324329, 324842..324965,325020..325200,325445..325549)) /gene="Cbr-amx-2" /locus_tag="CBG_07969" /standard_name="CBG07969" /product="Protein CBR-AMX-2" /note="C. briggsae CBR-AMX-2 protein; contains similarity to Pfam domains PF00890 (FAD binding domain) , PF01593 (Flavin containing amine oxidoreductase) , PF01946 (Thi4 family) , PF01266 (FAD dependent oxidoreductase) contains similarity to Interpro domains IPR006076 (FAD dependent oxidoreductase), IPR002937 (Amine oxidase), IPR003953 (Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal)" /note="Predicted" /db_xref="GOA:A8X5H2" /db_xref="InterPro:IPR002937" /db_xref="InterPro:IPR036188" /db_xref="UniProtKB/TrEMBL:A8X5H2" /protein_id="CAP27883.1" /translation="MLRWCLLILCVSAQQPSQQPVQQPPSASINSSNIQQSIYDVIVV GAGLTGLTAARNIQQSRPGLSVLVLEARGQVGGRVRYATMQTRNGVEFLDTGSQFISP TDTELLALIQQLNVLTNQQLTCGNNTVFQQTRRKRQLSFQQQWSTTLFSDLINSPELI GNLTNTSVAAMSQQMDTTDADSVNRLMQTFFDAPGEQVSEVQLALTCSSQNATAVEIL RRFGHGQSLLAQGGMNEVVRRLADGLLIEYTAFPAVVQTSTGRRFSARQVIVAVPIPT LENIDLVPTPEAPFQNYGPTGHAYYFTMSFQRATWRLNGRSGKVIYTSQSGPLVWLTT FDTTFASSCDNSTSASSSLWGIAHFSYDVPFETRKKLYIQAIMYSLRFADFSPLDCTD VNFATDDLAKGSIPTLRLNIPMESLKYLNDFHTLYQNVHIATADISSNSLGTMNGAVH SGSAVSNYVLQMLSAADAQRNELLRDTPVESTTPYVYSTSSHYPPAMFAAEIPAHVQN QTRIQNSPLTPSNSTSSGTFRYETSSQYPSTVQPPTTTTMKHFSFGNLDNSTNNEEPA AVLYDSPPQQAQPTLNYSTTFAYSTSSVMPPVVPIETTTIRHFSNGNLNETSTAQSPA VQRDDPSILINQQQNGYVYSTSTHYPIQLSSNRNINARATPSPEIVQQLQEVSESATN FTSLQLASSLTQLVQSLLTTLRLQ" assembly_gap 333729..334161 /estimated_length=433 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(335446..335687,336697..336995,338027..338337, 338400..338546,339423..339683,340381..340704) /gene="CBG07970" /locus_tag="CBG_07970" /standard_name="CBG07970" /product="Protein CBG07970" /note="contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)" /note="Predicted" /db_xref="GOA:A8X5H3" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR029021" /db_xref="UniProtKB/TrEMBL:A8X5H3" /protein_id="CAP27884.2" /translation="MDFQKFQNFQTFQIFQIFKIEIPRTCQTVSPQKSNLGRHKKVPT QKKSQKATNSPKNGQFQNRSLQSSSNSARKTMHRKTNPAKQGVKLHRNGFRKKQERKK CEDTIVEDENEQPEKKKTSKEDKKSTSAEPKKPKSRERERTSKEKRKSSAEVTEKEKE PESLKIARAAKVFCKYLLDMKESSLSTYFDEHLARYQPADQTSTEWDKNMSKNRSKNQ KLYDKTRVQLKCQSPEDSEYINASVVKFDGSDTEFIMTQYPMWETVRDFWRMVSQRKA LRVITIFEPFVDESIAEWNKVPSVMSSPATPLSATELQPEDEAKPQTRDQIVNNSVRC ESTQIKSFFPLYSEHYMNLNGWLINTQRIEIDERDKTWVNTYTIEIVADGCSEANYVR VFNCTTWPWKKVPNEEKKLLALVRAPWKDIHPGTQPNDPVVVMCDLGLDRSATVVLTA ILIEMVLAGKAPDCDALFKKMRDQRAGCFTMSMFYTYAIRAALTYLKIKFRQMQDIPD DVKAMLGEALNKVPFVKKI" assembly_gap 341746..342056 /estimated_length=311 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(343338..343682,344718..344979, 345858..346276,347425..347742,350236..350671, 351633..351759,352531..352618,353773..353775)) /gene="Cbr-nhx-8" /locus_tag="CBG_07971" /standard_name="CBG07971" /product="Protein CBR-NHX-8" /note="C. briggsae CBR-NHX-8 protein; contains similarity to Pfam domain PF00999 Sodium/hydrogen exchanger family contains similarity to Interpro domains IPR006153 (Cation/H+ exchanger), IPR018422 (Cation/H+ exchanger, CPA1 family), IPR004709 (Na+/H+ exchanger)" /note="Predicted" /db_xref="GOA:A8X5H4" /db_xref="InterPro:IPR004709" /db_xref="InterPro:IPR006153" /db_xref="InterPro:IPR018422" /db_xref="UniProtKB/TrEMBL:A8X5H4" /protein_id="CAP27885.2" /translation="MKILANGATWQLRESLITSKSGIMRFAVKTVLSICICLLIFRTA DSDSTTGAVVVGTIKTEEVVAVNKTDVLGETIDANATSLEQHGAAIVGNVSEEKKRSL AIFFILFVIMLATLVVHMLIVSKIHWMPESLAIVALGALIGSILSYSQRDWSEIEALS PDVFFLVLLPPIIFENAYNLNKGYFFSNFVPILTFAILGTTISAMIIGAGLYILGVVG IGLIFEFTFFECFAFAAMISAVDPVATLAIFQAVKVESLLYMLVFGESMLNDAVSIVL AATALRHAKPSFNKLPASEIITSAFVTFTEMFFFSACLGIGIGLLSALLFKHVDLRKT PSLEFALLLIFSYIPYGFAEALDLSGIMAILFCGISMSQYTRHNVSPIAQITFRHTFR TISFVAETSTFAYIGMAFFTIKLNFAPWLIFWSVLLCLLGRACNVFPLAYLVNQCRKD VQISMKNQIIMWFSGMRGAVCFALVLYMDLDKEKKSILLTTVLFLILFTTIFLGGSAL PFISFINRCYPNERQRKRRRTQRSKEANSKNSSALMMSKTQEMSFFGDDDWGPKKSAL DATSSAGRLMRSLFVRKFTAIERLENRDKLAALTKRALASDQMTDSDDVEFGATSSRK DELTRGRSASRNSSDVIISGGGGVSGEQHLLISSDSDSNEL" assembly_gap 348733..349083 /estimated_length=351 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(354917..355057,358156..358732, 359561..359829,361052..361144)) /gene="Cbr-gsk-3" /locus_tag="CBG_07972" /standard_name="CBG07972" /product="Protein CBR-GSK-3" /note="C. briggsae CBR-GSK-3 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8X5H5" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR039192" /db_xref="UniProtKB/Swiss-Prot:A8X5H5" /protein_id="CAP27886.1" /translation="MNKQLLSCSLKSGKQVTMVVASVATDGVDQQVEISYYDQKVIGN GSFGVVFLAKLSTTNEMVAIKKVLQDKRFKNRELQIMRKLNHPNIVKLKYFFYSSGDK KDELYLNLILEYVPETVYRVARHYSKQRQSIPMIYVKLYMYQLLRSLAYIHSIGICHR DIKPQNLLIDPETGILKLCDFGSAKYLVRNEPNVSYICSRYYRAPELIFGATNYTNSI DVWSAGTVIAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIQSMNPNYKEFKFPQI KAHPWNKVFRVHTPAEAIDLISKIIEYTPTSRPTPQAACQHAFFDELRSPDARLPSGR ALPQLEMDGPNEVSATGGDMAGPSA" assembly_gap 356477..356526 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(366038..366200,366253..366329,367170..367637) /gene="CBG07973" /locus_tag="CBG_07973" /standard_name="CBG07973" /product="Protein CBG07973" /note="contains similarity to Pfam domain PF03853 YjeF-related protein N-terminus contains similarity to Interpro domain IPR004443 (YjeF-related protein, N-terminal)" /note="Predicted" /db_xref="GOA:A8X5H6" /db_xref="InterPro:IPR004443" /db_xref="InterPro:IPR032976" /db_xref="InterPro:IPR036652" /db_xref="UniProtKB/Swiss-Prot:A8X5H6" /protein_id="CAP27887.1" /translation="MVHIISKKSVSFIGQSLAAKIDEQLFSKYGFKVEQLMELAGLAS AQAIAAHYPKSKVAVLCGPGNNGGDGFVCARHLQQFGFNPSIVYPKESKNELMKSLVI QCETSSIPVQPNLPTDLQSFPLIVDALFGFSFKPPAREPFTEILKAVRASGIHVFSID IPSGWDVENGAPSEASEDIIHPHAVISLTLPKMCMKSWTGPHFLGGRFVPRGLVEEHG LQMPVYPGFEQIVKVED" CDS join(367823..368001,369101..369265,369350..369440, 369494..369607) /gene="CBG07974" /locus_tag="CBG_07974" /standard_name="CBG07974" /product="Protein CBG07974" /note="contains similarity to Pfam domain PF03227 Gamma interferon inducible lysosomal thiol reductase (GILT) contains similarity to Interpro domain IPR004911 (Gamma interferon inducible lysosomal thiol reductase GILT)" /note="Predicted" /db_xref="InterPro:IPR004911" /db_xref="UniProtKB/TrEMBL:A8X5H7" /protein_id="CAP27888.2" /translation="MFASDLVEVFGISGCPDTSKFVKNQLVPFYEKFSSNFSKDFKLD FHAVPTGGSNVDGHYVNRCLHGKTECALNKLQMCAKKHVSGDWMVIIGCIQGLKSYNK ALECLPATEEAKIVKTCAETDEGEYLLNDENSYRFNVAPASSWLPWIQVNGKREPYAE HHLKDVVCSLESMKNEEMCQEN" CDS join(371955..372003,373245..373591) /gene="CBG26561" /locus_tag="CBG_26561" /standard_name="CBG26561" /product="Protein CBG26561" /note="Predicted" /db_xref="GOA:B6IGZ5" /db_xref="UniProtKB/TrEMBL:B6IGZ5" /protein_id="CAR99175.1" /translation="MTDGFVLIVFYVATCVYTMHVCAKKKKKPTAKIRPDVPMSGFGT TTMGAPEPAATASQMKKPEDVAAGKKEENNKKEEAPAEKKEEEKKEEEKKEEEKKEEG GDAEKKKSSDEKDEGKKEEGEKKKEESKK" assembly_gap 372439..372825 /estimated_length=387 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(373676..373786,374104..374121) /gene="CBG26562" /locus_tag="CBG_26562" /standard_name="CBG26562" /product="Protein CBG26562" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IGZ6" /protein_id="CAR99176.1" /translation="MPLTAKEQLIAQGKKVDKKEYQTMNDVESDWGDDPEKEEKKE" CDS join(375154..375174,375229..375339,375515..375700, 375969..376227,377083..378047,378910..379014, 379035..379898,379946..381559,382246..382574, 383243..383880,383966..384138,384933..385097) /gene="Cbr-attf-6" /locus_tag="CBG_07977" /standard_name="CBG07977" /product="Protein CBR-ATTF-6" /note="C. briggsae CBR-ATTF-6 protein; contains similarity to Interpro domain IPR008162 (Inorganic pyrophosphatase)" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X5H8" /protein_id="CAP27889.2" /translation="MDEDASEARCTLESCANVRDNLKRLMRDTRQRAEDLNNYAKVQA ESETLKLKLASVDAMFQQCEQKAFEATNAKEIAQASLKQIQTDWEYLRKKCGMLQEKA DDADKHREQANHWRDKYDTMCSLAEKLEENNIDIKSRFEATVKTLGLVTKKTVSYQNQ ISELKTSKSDAAQKTKKLDKYLKSAIKVIDSLSQSTNIAQQPKPIKDLIQVFRRDDVR LFFNSDPFKDASGASTSSAPPPQMEDSDDDMEVDRPPQDDSLLLGSRLSDDDDEVDVD VQKLESLLTTSAKPSECPEFTAEVKKSSKPRAPRVVDVKNLKRWPEGIKKPSATDYGG IISTRTVHSRRVATFDFDAVEKAATEARKTDSEGATSSATASGAASGATIHGKKGKTV REQQEEMMRKETVKEKVARMRAEAKKKPQKTSKDVPEETSEDVAPRRRGRPRSRSVSV HSKADDSERSEAPRRSTRLSRTLSEASEAVVPSEEPTTSEPPPTPKRRGRPRRSESRA TSRASSFLPKISLFFFSAAHHQAHRSHRHHVANELALVPSTDKGGRRRTKSVAVRCGD VAKDKKEEEKEEEEEQEIQLSSVKIAARKVEKAPEDVTKNQNPEDEKTGDVLKRRLLG STSSKKRAAPAPLTAGQPTRSRQMERIKAPLVTKKNSGGVVTKKKDSEDVTKGPEVKM AKTTTSEDVISEEKDPEGITKDPENVVAMEKASEDVIPTTSSTTFGDISSSSNESIVI DSEFDDVPFFRASAGADATSSISTSAIQKTLTAPESSEDVLEKVDEAIDVSSIYVDAP EEPIEESKDSEGVKNSESQKEAVKAPESTPRTILSLLTMKTSVAAKSPKQIQASKFGL DLSDSEEEEEDLKILTSSGPTSSGPTSSKIPEVKPLTSLASKYTEPPKVAPSTSSSKF PQATSSAAPEFTRKLTPSIFESSLNAHDELLEDILAGAHQKAAPKKVPVGRSRKQAPP TSTVTKKLENPTKLASSEAQKTQAPPTSTVIQESEQSSDVPTKPEVSKDTQSYAEQSE AKKTLQAPHTSTVTQVEPSGAQKATQAPPTSSSASLSQNKAEQSEAPPTSTVAKLTPR KPSKRHVESEAPHTTSSAPLAEQSEAKKAPQAPPTSTVIQQEDEQSKEDPSESQKTSK TQIPASVKKLNSGDVGEEKKPRVYKRRGAAPPTDLAPPILQKSLKPEEIPMPRVSARL TPPTTNQAPLTLKPANSDNFLDDILSGAHQTVPKAVPLPPKPLKRKATPTTTTSSSEG VSEDVGAAAPKRKYTKKTAGIQVIDPIPLLRRGRSKSRSRAPEEPLTSSDAAPESVAT SSLTTNSKKPGPTRAIMIDVPTRPHGKAIRQEQKPMGLKEAQEKSKERGGKRVDKSLL IIKSNFADKIAFPSSPGPESWSKRAETSLEDKGIVIGDSLPLTPSDAVDVMMEFLRES SPADMWAVLMRQKADANLTPLMNTEEENFLQVSAGLNDDHQMLLHLFIGRILYEISLR DAIDSKQCGRLIRLFCNAIKFAEHIPSEADDVTSSDGVETLLQEKKSTWMKSLFLILL HKNPHQLAKSLAYCLISDASKYCGFLVDELEKSPATTPSEIHVALRILMFKETDQASV INWLLNSKFQMAYVPQLTRDEIQTACHVTHQRFLENSDDVAIQKTSLYMAKCADSTIL EVTFGLLQQNMELIKKQFLEPKEKDQELKHRTVFSVPTVAAKMSNQEASALNKGIYWQ KIMLLVMIDNPTSTHSGEILKALTMISPQIVAFREIVESSNVESFVDAPGVKALRECV QHFLELTSEFTNFPMKPSTLPTSSS" CDS join(386307..386428,387059..387410) /gene="CBG26563" /locus_tag="CBG_26563" /standard_name="CBG26563" /product="Protein CBG26563" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IGZ7" /protein_id="CAR99177.1" /translation="MAEEAAENVPVPPPLPWNGNLHLIRYLEHILDEFLAARRPRHIE DLEPLHDPFDFLRWPPIPQFEMERELFLELHHQGLDHHLDNENFDLEDIFEDQEILLN RQMEMDYWEDEEEELELPEFEEEDEMDMVFFIEEEDDEDVDDEEIPDELFEVPMI" assembly_gap 388770..389140 /estimated_length=371 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(391346..391410,392236..392373,392878..393083, 393897..394096,395361..395615) /gene="CBG26564" /locus_tag="CBG_26564" /standard_name="CBG26564" /product="Protein CBG26564" /note="Predicted" /db_xref="GOA:B6IGZ8" /db_xref="UniProtKB/TrEMBL:B6IGZ8" /protein_id="CAR99178.1" /translation="MSRLRHNPYPHGLSYNPYAGSRIPASLPSSSGDESSSGDDEDLE DQDVALDVDLFGYDDATDYMDEMLFTAIFERLRRRHRRERAMDPPMAVPWHVPTQRTT RTTQRTTGTATANGRVDNDDDDPVFGIQAIRDMIQVSEPEDDGEPVPSADNVARWLGS HLDQEMGEMEIEEGQPPVVPEPAEGTPAEPAPGGAPEDDDDMPFEDYYPPVNFSATFY LFVLLLFIFPVYQIVQHPKEPPVYHRKLYIFPQGHRPWTMPQLIAFNINIVFFFIFLP ETLIAHMILQW" CDS complement(join(397504..397620,398207..398647, 399761..399877,399999..400288,400551..400715, 401403..401469,401508..401569,401722..401842)) /gene="CBG07980" /locus_tag="CBG_07980" /standard_name="CBG07980" /product="Protein CBG07980" /note="contains similarity to Pfam domain PF00013 KH domain contains similarity to Interpro domains IPR018111 (K Homology, type 1, subgroup), IPR004087 (K Homology)" /note="Predicted" /db_xref="GOA:A8X5H9" /db_xref="InterPro:IPR004087" /db_xref="InterPro:IPR004088" /db_xref="InterPro:IPR016021" /db_xref="InterPro:IPR036612" /db_xref="InterPro:IPR040160" /db_xref="UniProtKB/TrEMBL:A8X5H9" /protein_id="CAP27890.2" /translation="MNTINNMVRASQFTSQLANTIFTLCAQLKTSGSLLEQSHKNELN KVFTSLRQACCRDTDNSLRAMNWRTNLAHSQYYVNRPEGQHDPAPTVGIPPSSATSQS AQMTSSVTSPVPQSPQPPMQFVPPNPMMFQDPMGGGPNPGGIFFIPAASTWMNPLMPM PPNPFLPHSMLPPDHQMFLRQRSLNNKKPNLMNKTLQLRHEMIIRNSDSGKIMGVKGR RVAAVEQLTNTVISFQKVDAKSKERTLTITASTMEDIERAKDMIIDTIRRNMSPIRND MSMPPPMPIADLHQPSNPQGKSPEDDEDEDDEDIKLEQTSDGKLTFHCDDPELLAAAQ EALSAYLRVRARPSAEEREKKKERRKSMPLQQTAHHQQEPVMLKPSKTFHGSTPNLAD GLAATTTVVMATAVPASHVQQQQPQQVQAPIRYNRDSLMTARETMRAPMAPEMLKEIT RVAPDILIA" CDS complement(join(406257..406428,406479..406639, 406762..406932,407256..407344,407634..407665, 407908..407962,408246..408396)) /gene="CBG07981" /locus_tag="CBG_07981" /standard_name="CBG07981" /product="Protein CBG07981" /note="contains similarity to Pfam domain PF00400 WD domain, G-beta repeat contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR001680 (WD40 repeat), IPR020472 (G-protein beta WD-40 repeat)" /note="Predicted" /db_xref="GOA:A8X5I0" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR020472" /db_xref="InterPro:IPR028608" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:A8X5I0" /protein_id="CAP27891.2" /translation="MLRQIGEFYHQGEKDDTSRVWMTCWHYGGRILASCGDDKVVRVW SLVGEPDSKLRLECRTTLDDSHNGRSQQAGRTRKRKDEDEDFSVSSILQPHTQDVKQV VWHPTEDLLVSCSYDSSIRFYRYDGEDWVTQQKIDNCHVGTVWSAAFDSEGHRLVTVG EDHVIQLFVRENIDSKSADQDTWKSVARLEVENTRWPLYSVTWNSENDAIATGGGDSK IRLFKISSKSSDSPIIEHLGVVGSHEYDVNHVAWNPKFSNILSSASDDGTIRLWELDI " CDS join(410055..410372,410418..410523,410763..411115) /gene="CBG07982" /locus_tag="CBG_07982" /standard_name="CBG07982" /product="Protein CBG07982" /note="contains similarity to Interpro domain IPR001304 (C-type lectin)" /note="Predicted" /db_xref="GOA:A8X5I1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:A8X5I1" /protein_id="CAP27892.2" /translation="MRSKLPGYPQKTMNLLSHFLLSLIFWITVVFGSFEPKKKIIIKK EFLSSYSSSSSSSWSSEEHHHHHKRRPHRPRPFPSRPRPSAPRRCPDGWEMFNRAQGS WCVKVFYGPGTQAAALQGCQAQQATLTGVQDNTERLAIAAAARLVINQNGGGQGDVWL GATRKPTCPVASSCNGLLTFDWTDGTTTGIAGFKFAPTEPNGIIYPNWHNSNPWGQQN CLVELISGNSEVAKFGYAHGDMDDQHCQNTFRMYACGKKP" CDS complement(join(411845..411989,412164..412368, 412608..412713,412754..412978)) /gene="CBG07983" /locus_tag="CBG_07983" /standard_name="CBG07983" /product="Protein CBG07983" /note="contains similarity to Interpro domain IPR001304 (C-type lectin)" /note="Predicted" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:A8X5I2" /protein_id="CAP27893.2" /translation="MNPIPFLFWITVVSGIIIGDGGSYSGSQSSSSEEDHHGGYGGGH GGRPPRPPVVSSRCPDGWTRFDRPQGPWCIKVFYAWQNYLTGVSFCATMGANVSGYQN AEERMFVANTGRTLKAQQGGELLGEVWVGAIRNPACSAPGYCSPNDQFQWTDGHTTGS DGILWGPGEPNVIHPHDKVTQDCLVMHTSAADGQIARWNFGHGQMDDSLCWYGWTLIA CGKRPEPR" CDS join(413641..413655,414005..414081,414377..414515) /gene="CBG07984" /locus_tag="CBG_07984" /standard_name="CBG07984" /product="Protein CBG07984" /note="Predicted" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:A8X5I3" /protein_id="CAP27894.1" /translation="MRQWPADGHTTGKAEFVWAPGEPSTWLKNGGTQDCAIMHTTAFD GQIINLVHRALDDSMCAFLWQMVACGKRPDSR" CDS join(415492..415596,415652..415702,416916..416948, 416998..417069,417619..417663,418467..418586, 419442..419552) /gene="CBG26565" /locus_tag="CBG_26565" /standard_name="CBG26565" /product="Protein CBG26565" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IGZ9" /protein_id="CAR99179.1" /translation="MKDEPVFYTIPLDSPPSSRRSGPSSPAQKAPTSDDHVLIFPNRS GSKKRRARTSDGSSHEAKQVDAQIPAQRSDVYIVRSQPSQELLESSRWTAASAARKTE KPQTPPKSPVIDAPEAAADPPKMIVRAPMAPLVRAPPPEPNPPAPAPAVQEHAHEPPA SCWQWFVYCCCCKCCYKT" CDS join(420545..420628,422672..422743,422790..422879, 422930..423001,423788..423895,424281..424358, 424403..424630) /gene="CBG26566" /locus_tag="CBG_26566" /standard_name="CBG26566" /product="Protein CBG26566" /note="Predicted" /db_xref="GOA:B6IH00" /db_xref="UniProtKB/TrEMBL:B6IH00" /protein_id="CAR99180.1" /translation="MPKNRVHPSYGVQKTAENGGNHQKRMFLKLLKHPWKPAPSNAQK WMASEKPFELGYQGIPESGRLYRPATHPDLNFKNSSLLEKLGYEGIPESGQTYHPAVH SNLNSIQVVSDFKNAGNQKMDLNLLNPNEPPTWRTFPTPPIEYIPRPIEPRHLRQYQR DAKKLDEKKNANGRLQKSSILRRPEPTSTEIIPEKPPAPSRISIICEKASNFLLSKNF LIIFGLLVIFLTIYALIAIWRIRKH" CDS complement(join(425478..425611,425660..426100, 426147..426582)) /gene="Cbr-car-1" /locus_tag="CBG_07987" /standard_name="CBG07987" /product="Protein CBR-CAR-1" /note="C. briggsae CBR-CAR-1 protein; contains similarity to Pfam domains PF12701 (Scd6-like Sm domain) , contains similarity to Interpro domain IPR019053 (FFD/TFG box motif)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X5I4" /db_xref="InterPro:IPR010920" /db_xref="InterPro:IPR019050" /db_xref="InterPro:IPR025609" /db_xref="InterPro:IPR025761" /db_xref="InterPro:IPR025762" /db_xref="InterPro:IPR025768" /db_xref="UniProtKB/TrEMBL:A8X5I4" /protein_id="CAP27895.1" /translation="MSNQTPYIGSKISLISKLDIRYEGILYTVDTNDSTIALAKVRSF GTEKRPTANPVAARDDVYEYIIFKASDIKDLIVCDTPKMANIGSGLPYDPAIISVSSR SAPASDGAPNASAGSSRAGTPSRNSPLAHIVNQQRPGRGGYQQNFQSNRGFNNYRGGF GGYNNQRGHNNYGVPRVNHREKLKFESDFDFEKANEKFQETLTDNLEKLNIDEKEPKE VEEKKDSAFYDKKTSFFDNISCESLEKAEGKTGRPDWKKERETNQETFGHNAVRSLNY RRGFGGRGRGGNRGYGGYNNGYQSRGGYNNGGYRPNNGGYRRGGYVPRDNQHSSAAAT EQ" CDS join(427906..428049,428717..428860) /gene="CBG07988" /locus_tag="CBG_07988" /standard_name="CBG07988" /product="Protein CBG07988" /note="contains similarity to Pfam domain PF10203 Cytochrome c oxidase assembly protein PET191 contains similarity to Interpro domain IPR018793 (Cytochrome c oxidase assembly protein PET191)" /note="Predicted" /db_xref="GOA:A8X5I5" /db_xref="InterPro:IPR018793" /db_xref="UniProtKB/TrEMBL:A8X5I5" /protein_id="CAP27896.1" /translation="MAGITAHSQSQQFEDDEFNELKKTGVSCDRLRQALKKCIKNSQC VQVQARSAKECIDAHDGSVPDKCFAVLQNFTECKRSLVDMRSRFRGRKGDL" CDS complement(join(429235..429348,429940..430460, 431873..432035,433471..434251,435325..436356, 437102..437745,438502..440471,441429..441488, 441933..442974,443259..443448,443698..443956, 444706..444799,445021..445173)) /gene="Cbr-pad-1" /locus_tag="CBG_07989" /standard_name="CBG07989" /product="Protein CBR-PAD-1" /note="C. briggsae CBR-PAD-1 protein; contains similarity to Pfam domain PF04118 Dopey, N-terminal contains similarity to Interpro domain IPR007249 (Dopey, N-terminal)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:Q5WNI9" /db_xref="InterPro:IPR007249" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR040314" /db_xref="UniProtKB/Swiss-Prot:Q5WNI9" /protein_id="CAP27897.1" /translation="MASASGGDVPAGREKDSKYRAFAKAVDQALKTFETPNEWADLIS ALGKLAKVFQSNAKYCAIPNRVTVAKRLSQCLHPALPMGVHLKALETYKIIFEILGPS KLPECLYLFAVGLFPLMDHCGIKVKSELFAIFENYLVPLGANLRPALPGFLGGVLLAL EEGTEFYERSFILLDRVCEKVGPRAFYACLWQAILGSPPVRLPAMIYVNAKFDKLKSL DDQIHLVGDHVNHMVAALCAVADDTGSPLVQRYLLDFLCAAFPLDSTNLTDEDFVQLL RRCLFVVLRRDMSLNRRLYTWLINRSGETRGVSGLGGPDDGLELSFFKEKVLGLVHGA LEQYLALDIIETPFANPQQSIWGDRKEAEQVQFAEVRVCRLLLYLQDRADIGRTILET VFSDFLKKSAEFHQGSNIKLIKKRPDSKPPRKPGDREGLHLDLNSLHSGVSGNSEDVT APEGEPSIQSRRVDELSKTFNMLLNSLEPGFLWNFLGTWYQRIVEEGSEGKKSIHDFS QVVSICLEMSNVESDPAIRTQHLPRLLETILEGLSNKSLISECDQQDLLKLYTVCQKL LEISTAHPQSPIEVDEIAEDSLSLSQEVTAIEHERSQTDACLTQCVSALSTIFEIYTT RRDPSLIPLIDASTALLNAFLEVPIYYLGFDVVDNPEDVPSEVQQWLKNMLKVIDGPG WLKEMRNGHCSDVSARASLLELLCKIYVKSVSVLQQHEEAAHRPQDDFYDEMTHVLLK PLLGRRDIQFIEQGKVFGTCGEAVWLGIASRKFCCEQQRLARLLVELHSRRPQEASSD VESIVVQALTSTDDLVCTKAARTFHRVWVLTRNLEEAGGIYRKPFNRAVMILLGVLAD ESVSKTRTELKAAASAWFQDCSKHQDLPKIVQMLSTMLMNPVTARISIQYIRQDSKLT NEDCSAIPSDVAAVTLMTIDGKQRLYHVTGSGADSDASYLTEVRNRLLRASAGEETSE ALQAHIIPSTEVLPAFDDDTDSLDTLSMGNESPEDVVKDILAILVDEVCQEYEERERL HDLLNLSNLEASGARFNLNEHEEQEESPEDRPAPIAAVQRVKKGHRRQDSLQESIFNM TEKDLCAFDTSEIFRPSTESLRGTATTSSTRETILPTGTVVGTVSSASSTGGSTSGSS LFEEMHTHMLLYGESGKVVDLARAETAFRILTALLAPRGATGNRMLLNCLVSSGTTTS SGTSSEGGSAEQSLVELMQRHVRAILGQHFWSAPASDEEKHKHFTLLELLITISLHFL RSYFLNSPISPVTEADLASLWKCKISALEFLCELFRELSAMLNEHESKQFVQFVQTIL NRSKLQKCLLHLLLTAVDHNPMENGKLGGPLSVSISKFNEGLVGESRRLLPLLAAYHR SLLTFTSHAIRLECDIKRGFSTFSDAQSTHRYSIIQSVINQSFNNRTSSRDGHASTVE LRAFLLILLNALKKQPHRHEMWLQFVVQILPWVERSLATIVCRVVEQLCKNMENAMSV AYENPPTSDVVVDSPGETRDEPDSYPANYLAMTLESLTTLVHFCVIDSAPTTTTTSGG VMTSSGAAQINDGTTPSSTSMVGHAMSVIPGSKVATELFSQLGKVFSMSGDSGGVLSS KMESSRQHGNGWRQAQSDMLTSLPHSLATVCNVWTVVRRAQNPLVPIGTNNQLRRLVL HLLSPIAQHHKHAFLTSLALVWLTRSTAKPTVTLRKQDPDRATFEYSSAQLDITNLLL SLQVIPFEDLISSVNSTLREASFKANKVGITTIDKTNFPTEEPLLELVHSCVSAVLQT QLRLCWSSLLSLFSEAPLSALSARAVFLLFVILSDFVKCVGGAYIVEDKAMYRNVQEV CSRLAEAVNAIVGWQLETTTWLKRTLVVKQDHGTSSINSNSIRSVEQSPIIEMQSSIS NLSSEASQSTRNSTLSLINKPGGSITSGSTSTTTEKAEKKSSSNLRASIKDTNNNRRD PAHSTQALFLLAERLTDLLDSVSKSDEKDKVLPTLQAVWANVVPYLKAKNARNARFFL ASSQLLASMSSYSYMRPVWKKTTLDLLLDSGFFKMDHAALKQWLVVTDHLMTHDRTSF KDLLKSISYSPNASFSIMTSKEQEYEARAQALKRLTFVVFGSQLDQYNGQMNDIQERL SDNLRVSQSPVIRSSFFLCVRVLLLRLRPHSLIGVWPIMVTELVHALSQLEQQLQNNG EQEGSSTSDQWMQLYVAACKLLETLCTLPAGYLSHFQMFHWAFVSSVSADKTEIFKPF AERINDLLAKKYGEFDAMSNHTASLAAVKILTSFEELRPFFYTLANLNKSVPESNNTP LRDAHALSGSLTYKNAVARLESALYVDFSEHLQF" CDS complement(join(448477..448780,449229..449875)) /gene="CBG07990" /locus_tag="CBG_07990" /standard_name="CBG07990" /product="Protein CBG07990" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X5I7" /protein_id="CAP27898.1" /translation="MHISSFNNFSQVDLVTRDSQNRIVKSWRLHFVPFTGSEWFYKGN FHYPVYFKNSCENFVFLVVQLQEVFEVKHETLRLEIGEEWNAEKMKPYVEWMNGFNWE SGKIPSLNVVAKDEPSLKFLLENMTRDVGRMEIQTTYSERCQVSSVNFKMDVLTGSGK DWLDRKMMRSMDAIRMDFYQTDLTNLDMNQFLRSWKEETSNGRIQEIRLPLKERVKFT NDNQLYQLHGGFDITRADGRMATIGHNLYNLSFENAPIQQYEIEECTRISRVWNLEQS DEEDEIEDVVVLEEGAQPMHIALQKDRRKQGRRYIFMIVW" CDS join(451187..451851,452232..452517) /gene="CBG07991" /locus_tag="CBG_07991" /standard_name="CBG07991" /product="Protein CBG07991" /note="Predicted" /db_xref="InterPro:IPR012885" /db_xref="UniProtKB/TrEMBL:A8X5I8" /protein_id="CAP27899.1" /translation="MGWNRKYWRLRFHPLTGYGMPYKDDDYYQVYMKNSSENFVFLVD HLQDVFEVKIGALELGVREGMNVEKMKPYVEWMNGFNWELGKIPALRVVSSRNELSLK FLLENLKQGVERMDIEVLYCRNPIKCSSVNFKVDVLTGNGEEWLATETMKSIDPIRMD LRETHLSNLDMNQFLRSWKEGTSNGRIQEIRLPLKERVKWRTMLDGLDAELGDFRRTR KTFRFTNDNQLYQLHGGFDITRADGRMATIGHHGYNLSHEDNPWQQFEIEECARISRV WNLEESDEEDEIEKGDGQGYIEWIKRYRREERRNIFMIVW" CDS join(460258..460353,460639..460836,461380..461564, 462065..462195,463264..463716,464091..464280, 465479..465531,465760..465971) /gene="CBG07992" /locus_tag="CBG_07992" /standard_name="CBG07992" /product="Protein CBG07992" /note="contains similarity to Pfam domains PF03222 (Tryptophan/tyrosine permease family) , PF01490 (Transmembrane amino acid transporter protein) contains similarity to Interpro domains IPR002091 (Aromatic amino acid permease), IPR013057 (Amino acid transporter, transmembrane), IPR018227 (Tryptophan/tyrosine permease)" /note="Predicted" /db_xref="GOA:A8X5I9" /db_xref="InterPro:IPR013057" /db_xref="UniProtKB/TrEMBL:A8X5I9" /protein_id="CAP27900.2" /translation="MGTKKVYTVNSDGKLPQKHSETSMASSDSSSTYHNSHGISWAMA AVFIVGDMMGAGMISLPLSLGRAGLIAGVVLILLASLFSGYTGIQLGENWEMMQIRWP KYRTHCRRPYPEMAYRALGNWARQAVAVCLVVSQFLIACVLLLISAENFTNLLNTFFG LHLDFCIFIVAIALVLWPFSMLQSPMDFWQLAVISALSSTVAAGLIVFGASWDMPVCA PHRQMPALTAKQFTLSYGTIVFAFGGHGAFPTIQHDMAMPGQFNKSVISSYICEFFGD YKDYKLELPVITLVYLAVSITGLMAYGDSMVDTVIPSIQLTWVAQTINVLITAHILPT IIIVLSPLSQQVEEWIRIPNQFGGRRFLVRTIVLLLVCFTALSVLKLGLFLDLVGATT ITLMTMLLPSIFWLFMQAXHKKREDGVWYYTPKLLLAFNLISLTFGLVGGLTSAWSAI EALIFSEQVAPCYVNWFRHGFTAEVAGGSVNCCGVFKNITHYGGIEQCSILSSGH" assembly_gap 462523..462982 /estimated_length=460 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 466298..466729 /estimated_length=432 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(467898..468229,468279..468389,468436..468463) /gene="CBG07993" /locus_tag="CBG_07993" /standard_name="CBG07993" /product="Protein CBG07993" /note="contains similarity to Pfam domain PF07735 F-box associated contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /note="Predicted" /db_xref="InterPro:IPR012885" /db_xref="UniProtKB/TrEMBL:A8X5J0" /protein_id="CAP27901.1" /translation="MNITQKIVCLQKFPSNFRLKLDKFPEEILLHYSCWFTIDQLLDC TCVRIELWGSLLSNQDMDVFFRKSKKSGSFPNLCWLQIESKKTDNKSPILGMIPPIER HHSPRMRASLGGDSNILNPVRVAKEDGTIGWLKLDLATSSTLKFLVRNPIASSI" assembly_gap 469139..469367 /estimated_length=229 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(470345..470418,470463..471124,471255..471331, 472217..472294) /gene="CBG07994" /locus_tag="CBG_07994" /standard_name="CBG07994" /product="Protein CBG07994" /note="Predicted" /db_xref="InterPro:IPR012885" /db_xref="UniProtKB/TrEMBL:A8X5J1" /protein_id="CAP27902.2" /translation="MPIALLKFPTDLLREVFKLCDPFELYLSKYSKRTQKSIKSGGTK NWKLQFCGGNIIVASVDGLHYNFGITENPDDYFKTQNAAGYGNYMSIEFGNPFYVFFY LIDTYRIRVVESLGIYFGSFDKLSNAARELIGRNIEIEQVHIGSNPEVKKIDKLMPLT NKMHVNQNFECLKKFPPKFRLKLDKFPKNILIASSFLFTIDQLLECTCVRIELWGSLL SNQDMDVFFQKRKKTRSFPNLRWLQIYNLVLTVSITPFNVIKDNGTVGLLRVEMPIAI LNFPTDLLRDVFKLCDPFQL" CDS join(473715..473788,474876..474933) /gene="CBG07996" /locus_tag="CBG_07996" /standard_name="CBG07996" /product="Protein CBG07996" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X5J3" /protein_id="CAP27904.2" /translation="MPIALLKFPIDLLRDIFKLCDPFEFANPADTVVHHYYIRVRRY" CDS join(476001..476116,476166..476901) /gene="CBG07997" /locus_tag="CBG_07997" /standard_name="CBG07997" /product="Protein CBG07997" /note="contains similarity to Pfam domains PF07735 (F-box associated) , PF00646 (F-box domain) contains similarity to Interpro domains IPR001810 (F-box domain, cyclin-like), IPR012885 (F-box associated domain, type 2)" /note="Predicted" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="UniProtKB/TrEMBL:A8X5J4" /protein_id="CAP27905.2" /translation="MRFLPSLLSSSLFQMPIALLKFPIDLLRDVFKLCDPFQLYCLSK CSKRTQRSIKLSGTRNWKIFSGSNRAVIHVDDWRYSFQKAEKPEAHFQQDNFYKSRSI QCPDGDVDLFFILLDTFGIRLVGMLSIDLCNFESVSKKAKILIERDIEIEEFCIGNTR GAKDAVHIMPLVNRLNITEEFECWPRFLCRFHYQLDKYPKKIFINWSYWFDINQLLNS TCVRMILDKSILSNQDIDVFLRKWNKAGEFPNLRWLQIASKKLDNRSPILGMIPPIQT FNSPTIL" CDS join(477641..477714,478564..478686,478743..478818) /gene="CBG07998" /locus_tag="CBG_07998" /standard_name="CBG07998" /product="Protein CBG07998" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X5J5" /protein_id="CAP27906.2" /translation="MPISLLKFPTDLLRDVLKQCNPFELFGEEIEDEVMIYDAVRICK EDGKKAWLKVVLGDVPKLRFLMCKPGNTWVEEIDLSDYEEESEDEV" CDS join(479972..480045,480091..480846,481546..481711) /gene="CBG07999" /locus_tag="CBG_07999" /standard_name="CBG07999" /product="Protein CBG07999" /note="contains similarity to Pfam domains PF07735 (F-box associated) , PF00646 (F-box domain) contains similarity to Interpro domains IPR001810 (F-box domain, cyclin-like), IPR012885 (F-box associated domain, type 2)" /note="Predicted" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="UniProtKB/TrEMBL:A8X5J6" /protein_id="CAP27907.2" /translation="MPINLFKLPSVVFREIFQEWTPLEFYSLAKCSKRLLSLVKSIKT ENWRIISIEPESITLSCGVYGDYTFQISENPDVPRLLEVHPRIRMLRHPEEGVSDLLA DCSELFGITVIDKLDAKNFIFFDHFLKLSKLIVDRKLEVKRLFFEDLNFYIRNVAGVI PFLNVMKITENLFYSHYLENGFQPNFARFPKTIFIKGSSWFNIEQLLDCTSIRIKLED SMLTNEDMDRLLRKWKRNEMPNLQWIKVCSQKIHPRDTPILDMRLPIEVQFNPTGHSV IFDDNSRVWLSGGIEITADDGTIGYLKCSGHELEFIVPKPSKKFACPVLIRKRNS" CDS join(484910..485029,486844..487473,488045..488188, 488245..488394,488440..488655,488735..488936, 489617..490012,490102..490121) /gene="CBG08000" /locus_tag="CBG_08000" /standard_name="CBG08000" /product="Protein CBG08000" /note="contains similarity to Pfam domain PF03803 Scramblase contains similarity to Interpro domain IPR005552 (Scramblase)" /note="Predicted" /db_xref="GOA:A8X5J7" /db_xref="InterPro:IPR001699" /db_xref="InterPro:IPR005552" /db_xref="InterPro:IPR008967" /db_xref="InterPro:IPR036960" /db_xref="UniProtKB/TrEMBL:A8X5J7" /protein_id="CAP27908.1" /translation="MHKWRPVVTIRKISREKLEEGFEKEFRLEETCFIAVTIYHNRDL VDLKIGNNPMASAFREQYLLKKNRVLILKRYQSRRRSDVFPTPPTTPGAAAGLPALTN GITSPLQSRQARSPLVESSENQKPTVNRITDGFPESSNISPQFPMPAGFSAPVNGTTS HQKPVPTTNYILGSSALGNQPPGFAAPSNISPQFPMPAGFSGPTTNPMMGSPALSNQP LPTNGFPAPSTQFSMPSYQTLLSQNLMLFRLLKKEMSHHNRGPYRQNHQPMPRHHPAR HQQLPEEQDEPIDVPNAIANMPGYRQLEPTSALESIAASSCLMVVQCLEPIEMWTGIE TPNRYIVHDMYMRRILYAHEESDYWDRSCDRNRRSFDLHMFDNRRQRLMSSSRYGGGS FTCSPDVLETWHRGNSIGILSRSTCDHRFYLRIAGCPTEFAVVAPDGAQSSPACRSRH TLPFPIYIQGGAKVGEIVRLDPGYLEWVSYADTYMIHSFYQLLHPLLHPQPLRAHCSK LNTSLTTEPSEQWSAFFSSDCSSVAFAILEVPGREREKRRRHGRFLDGRLLLQKARLV TWRVEKEAFGVNLGHLESLEKARRGRRKLEIQKVPLDKPLPRSREPNLGPSPKSPVSI L" CDS 485813..486184 /gene="CBG08001" /locus_tag="CBG_08001" /standard_name="CBG08001" /product="Protein CBG08001" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X5J8" /protein_id="CAP27909.1" /translation="MGRCPILLEDPMLSGKVIFGPWKQMLLQNFFYVILFVDERHLPQ FIKKDGWPASSPDLNPLDFSIWGVLQNKVCARPHSSVEALKKKLVEEWDKLSVEYLRA TVDAYPRRLRAVIAAKGGRIE" CDS join(491360..491527,491577..491682,491835..491908, 491910..492025,492724..492880) /gene="Cbr-clec-92" /locus_tag="CBG_08002" /standard_name="CBG08002" /product="Protein CBR-CLEC-92" /note="C. briggsae CBR-CLEC-92 protein; contains similarity to Interpro domain IPR001304 (C-type lectin)" /note="Predicted" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:A8X5J9" /protein_id="CAP27910.1" /translation="MRLLILLTLLGITVARDDYSGGHRPPPRPKPPAGGRTKCPAGWM LFKRSQGNWCVGLFVGQFTQPNAELQCHQHQAVLTGLQSNNERQRLASAGQKMIQKHG YGDAAIWLGARRKGPGMCQPKETFFWTDKHTKGTAGFGWAAGQPDGVLSYTLGAQSCV HQFVFPSGTTHPRWPGIMHGQLDDQYCQEGRINPNRKMYACGKLAT" CDS join(493340..493585,493633..493738,493887..494100, 494170..494320) /gene="CBG08003" /locus_tag="CBG_08003" /standard_name="CBG08003" /product="Protein CBG08003" /note="contains similarity to Interpro domain IPR001304 (C-type lectin)" /note="Predicted" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:A8X5K0" /protein_id="CAP27911.1" /translation="MKFLILIIFCFVCPILAAIGRYDGGRDSSSWSSESSEGHGHGHG GRPRPPRPPVRPRPPREKTNCPTDWMLFKRTQGNWCVRVFVGRFNHPQSEAQCVAQGA KLTGLQTNEERLKVADAGLKLIHQNGFQQASLWLGAKRKASCPRAGICAPIDTFEWTD GQTTGTDGFNWFSHPGDVQPDGKWRNDWGHQSCALQFLFASGTTSNAWRGFVHGQMDD QWCQYLDNNSRLYACGKLAT" CDS join(495493..495780,495828..495933,496141..496342, 496695..496851) /gene="CBG08004" /locus_tag="CBG_08004" /standard_name="CBG08004" /product="Protein CBG08004" /note="contains similarity to Interpro domain IPR001304 (C-type lectin)" /note="Predicted" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:A8X5K1" /protein_id="CAP27912.1" /translation="MKLSILIFFSFLCPILAAIGVYNGGEDSSSSSSWSSESHEGRGG GRGGRGGHGHGNGGGRPRPQRPPARPRPPREKTNCPADWMLFKRSQGNWCVKVFVGRL NQPQAEAQCVVQGAVLSGLQTDEERVKVAEMATKLVHQNGFDQASVWIGAKRKAACPR VNVCPAKDTFEWTDGQTTGTDGFGWSLGQPDGVWSNVWGHQSCCHQFVFASGSTSPTW PGIFHGQLDDQHCLEQWNGSNNKMYACGKLAT" CDS join(497377..497460,497926..498147,498771..499100, 499385..499792,500165..500266,500747..500986) /gene="CBG08005" /locus_tag="CBG_08005" /standard_name="CBG08005" /product="Protein CBG08005" /note="contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)" /note="Predicted" /db_xref="GOA:A8X5K2" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR029021" /db_xref="UniProtKB/TrEMBL:A8X5K2" /protein_id="CAP27913.2" /translation="MEKKRSKTNLLQKFAEKFKKKKRAKSTSASRERSSEMSRRPSRQ HRSPSKGKQTTPSGTPSASAESKSRIDLMEVTAKGVKEKTKEKQRTSDKNKKKKNEKE TTIAPSKSPSTPGLRRADSLMELSQNSKVVEKAVRTWLETIGKEDFMKKTLDSEYKSL DAIKVDMDKCQAFKKNIDLCQSENIEVLDANRVKGNGEADFFYHASVLNLAPITTKTT ILAQLADLDSPQSLESFWLMVAAQKIQRVYFLTGSDSSDSAELDKSAFATYFPEDFTE FKTIRVNNRKTIQKSEEQPNSQLYYEVVPKDCAEAPFCMIEICDFWPDAKIPAILQSV RIAGTAASVFETDIDADASCAIMSNYGAGRPGSFLVGALAIEKLRNGDDIAILVRSQR PGAIETFSQYMSTYIIALYYGQKHVKDGELKSKLSNLISQLETFATSSMKEEEDDDDS AGTTTGSNTCD" assembly_gap 502545..502635 /estimated_length=91 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 505100..505789 /estimated_length=690 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(508138..508295,522924..523050,526817..526902, 527143..527244,528041..528287,528685..528778, 529314..529486,529637..529730,530451..530687, 530790..530878) /gene="CBG08006" /locus_tag="CBG_08006" /standard_name="CBG08006" /product="Protein CBG08006" /note="contains similarity to Pfam domains PF00071 (Ras family) , PF08477 (Miro-like protein) contains similarity to Interpro domains IPR013684 (Mitochondrial Rho-like), IPR001806 (Small GTPase superfamily), IPR003579 (Small GTPase superfamily, Rab type), IPR020849 (Small GTPase superfamily, Ras type), IPR002078 (RNA polymerase sigma factor 54, interaction)" /note="Predicted" /db_xref="GOA:A8X5K3" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR020849" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8X5K3" /protein_id="CAP27914.1" /translation="MSFHRRRQLPASPDDIEQGNVMYTPMTPQIMRRCHPHLQEVRSF DPMLVSQLRTESSQNRELLSGEGTDGYLSVDMRNIPLRSQSFKHRPKPAVEVRRMAVD NEGPHERRRSTPTVSRRPSLQKSRIMEPRTDVWPEAKNSGLEERFLKLPDSEDYTRVR QFKIDEKGAVVSRGDSFRRKRTPTYKSDKSPSPFPVSVSTDSARGSRSESEASEPPIS DDLGKMTINDLTNASTSHKTYKIYVVGDTGTGKSSLISQLITSEYKNAFADEIQDYEN TVSINLGGVECDLVFFESDLSDACWLTNEVHAFLVVYSIDSKSSWKQAVMALEMIRDR PDCRNIPTLVAGNKIDLERKRTVTKNEVRSTQAAYGFADFEISVALDHDVDDLLIGLV AEIQEAFAPEIILHKPSPRHHPVDDFHSAIRRYSQRKKKAPLNDLEGGKCSVLSPTGL FAKFKNWRRGSTPRIETN" assembly_gap 510120..510129 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 511395..512158 /estimated_length=764 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 515828..515837 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 524862..525698 /estimated_length=837 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(531243..531297,531914..532107, 532330..532736,534268..534861,536613..536784, 536983..537075,537725..537865)) /gene="CBG08008" /locus_tag="CBG_08008" /standard_name="CBG08008" /product="Protein CBG08008" /note="contains similarity to Pfam domains PF00970 (Oxidoreductase FAD-binding domain) , PF00175 (Oxidoreductase NAD-binding domain) , PF00173 (Cytochrome b5-like Heme/Steroid binding domain) contains similarity to Interpro domains IPR018506 (Cytochrome b5, heme-binding site), IPR008333 (Oxidoreductase, FAD-binding domain), IPR001433 (Oxidoreductase FAD/NAD(P)-binding), IPR001199 (Cytochrome b5), IPR001834 (NADH:cytochrome b5 reductase (CBR))" /note="Predicted" /db_xref="GOA:A8X5K4" /db_xref="InterPro:IPR001199" /db_xref="InterPro:IPR001433" /db_xref="InterPro:IPR001834" /db_xref="InterPro:IPR008333" /db_xref="InterPro:IPR017927" /db_xref="InterPro:IPR017938" /db_xref="InterPro:IPR018506" /db_xref="InterPro:IPR036400" /db_xref="InterPro:IPR039261" /db_xref="UniProtKB/TrEMBL:A8X5K4" /protein_id="CAP27915.2" /translation="MNNLSVNGGGNQLFAKPTIGRSEYGRVKVALAPGKGLMDWLRLT TNKHLAKRVTGGVDHVELMKHDKEDDCWVHLFGRVYDVTKYLEFHPGGIPELLRGAGR DATPLFNQYHAWVNYESFLKACLVGPFIGDLTKLPPPLPPTTSEDTNKLGLPPSATSL FSTDPSENGFGSRLEFLENGISIEHDDWTGLTEQNVVVSLLTTSVKTSINTRGEESSE ERARLRILIHHFWKPAMEFEFEANSELLGQTFDLKIEKNRVELQFPGFQNSKIREILS REKCKIQRRPGVSYHAFRITNVFRLNHDTMVFSLEAPEHTIYRIPMGHHVSVKVRKGN AVLYRPYTPIASSNPRHLDLMIKIYPDGICTPSLENLKIGDELEISDPIGEKDFTGWV ENSQQLILLAAGSGLTPMINILERRIQKTSGGDSEVYLLMFNKTEEDIQTTSPEEDVK NLWKLGDYWKENEGNQKIVSLLKISKFPHFQLRNILSAPKTEESEHQLHGRVSGDLLQ SIIATSSGARRAFICGPDGFIMAAKNALDTLNISSDHVHIFQG" assembly_gap 533218..533630 /estimated_length=413 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 535429..536251 /estimated_length=823 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(538188..538339,538420..538567,538632..538799, 538899..539093,540324..540437) /gene="CBG08009" /locus_tag="CBG_08009" /standard_name="CBG08009" /product="Protein CBG08009" /note="contains similarity to Pfam domains PF05773 (RWD domain) , PF01205 (Uncharacterized protein family UPF0029) contains similarity to Interpro domains IPR023582 (Impact family), IPR001498 (Impact, N-terminal), IPR006575 (RWD domain)" /note="Predicted" /db_xref="InterPro:IPR001498" /db_xref="InterPro:IPR006575" /db_xref="InterPro:IPR016135" /db_xref="InterPro:IPR020568" /db_xref="InterPro:IPR023582" /db_xref="InterPro:IPR036956" /db_xref="UniProtKB/TrEMBL:A8X5K5" /protein_id="CAP27916.1" /translation="MSDQEQRLTEIESLAAIFPDLLEDSSEKQLIFRFQKNISIDILL PDDYPSISPPTFVLSGPYLSRDQKEMIHNNLNEIYVENMGFPVIFNWISAIQDFVQDL PQNKPKVAEDVADDVARVSVEEEVDDMNIQHGEVFTDRKSAFQAHMAVVRSKEEVDRV MRILKSNSKICRATHNILAYRFTTENNGKSIHHHDCEDDGEHGASSKMLELMDRMKAN NVMVVVTRWYGGIHLGPDRFRHINNLTRQILSDNNYGAKK" assembly_gap 539650..540153 /estimated_length=504 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(540669..540761,540806..540862,541192..541265, 541311..541454,541538..541582,541958..542012) /gene="CBG08010" /locus_tag="CBG_08010" /standard_name="CBG08010" /product="Protein CBG08010" /note="Predicted" /db_xref="GOA:A8X5K6" /db_xref="UniProtKB/TrEMBL:A8X5K6" /protein_id="CAP27917.2" /translation="MRYLIELGSPNSIYYTVFCCSHIIIAFAIFMILDMTLQLFSLFF ELFVIFDSPPAIIFFACRVVLILCVTIARFIISIQEFSSSEEPTLQELSNLFQIIPVI LYTIGAFLSIKLFSFFTGRYRGYYDVDEDLRLEIKRAFTEFEATIDEAPVKED" assembly_gap 545523..545689 /estimated_length=167 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 547962..548010 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(548413..548472,548809..548952,549136..549291, 549601..549798,551588..551767,552810..552962, 553009..553088,553133..553424,554305..554418) /gene="CBG08011" /locus_tag="CBG_08011" /standard_name="CBG08011" /product="Protein CBG08011" /note="contains similarity to Pfam domain PF01064 Activin types I and II receptor domain contains similarity to Interpro domain IPR000472 (TGF-beta receptor/activin receptor, type I/II)" /note="Predicted" /db_xref="GOA:A8X5K7" /db_xref="UniProtKB/TrEMBL:A8X5K7" /protein_id="CAP27918.1" /translation="MPKTKWRLNLKLVLLIFIAQIQISEAVKCFDCVGMDCMGSFCEG DYCMISQYAPRWGSARWGEPEIVKGCAKGSMLAKDVRDHCEFAEDSDEPFTCFCNGKD LCNSRKTIRKVEREDVELVQCVCNGAHCRNDKTCIGELCTFVKNHKTKQVEQGCTNAS VPLIERRAIGSCMAPPITGAMHHVAKEAESLLAVESCICGTDYCNSEKPSISVPEKEK CNALVEVTTMGTTTRSENISCTGEFCFTASIKSKLGVMSSYRIYGCASFTGEDALPEE LDPTGCAIFTSESLETKTCFKTSDRAAVGRALASKQIPESKASKPSKGKSSKSKPKQV EVEYDDEEEEEEEEKAEKPKGKSPKNREKAAEEAKKEEKIKEEEEEEEEREEEEKEKE EKEETSTKKSFIFQKPTQPPIPDDSNTTMITVFVLIIICILGSGIVWKFELHKKLRRS NYDSVAGG" CDS complement(join(554806..554895,555286..555487, 555536..555618)) /gene="CBG08012" /locus_tag="CBG_08012" /standard_name="CBG08012" /product="Protein CBG08012" /note="Predicted" /db_xref="InterPro:IPR005579" /db_xref="InterPro:IPR026570" /db_xref="UniProtKB/TrEMBL:A8X5K8" /protein_id="CAP27919.1" /translation="MVATGADLLKVNDTCQSNRWWKTKQDKKHSTIKKVKTLKTSWEK KMEVKAKKEMVKSFQDNIRERAVQERQERKERKEEQEKRRLENERKSEIVQKITKIHK LKKTKKRQLRSIQMRDTTTVSK" CDS join(556223..556304,556348..556465,556550..556901, 557587..557735,558155..558485,558782..559146, 559193..559280) /gene="CBG08013" /locus_tag="CBG_08013" /standard_name="CBG08013" /product="Protein CBG08013" /note="contains similarity to Pfam domain PF00153 Mitochondrial carrier protein contains similarity to Interpro domain IPR018108 (Mitochondrial substrate/solute carrier)" /note="Predicted" /db_xref="GOA:A8X5K9" /db_xref="InterPro:IPR018108" /db_xref="InterPro:IPR023395" /db_xref="InterPro:IPR039158" /db_xref="UniProtKB/TrEMBL:A8X5K9" /protein_id="CAP27920.2" /translation="MPTQFIRNRSAFPQGSHNDMDDFQYQNDFSQLPSSASGYSEPQN YSPPPGKSTTTDPLAGALLGLSDVITKSLISHPCSVIRRQCQVHQNAASLHLTPVTLI PVICNSVAKEGVQTFWKGALGSSVLWGLTNVTEIVLGDLLGLPRTFVMNGSTEKYWRH IVLKGVTSVVMTPFYISSFIETVRSESGIGGEDNKILDVLVKGVDRMRYFVSTGRDAS RKFSIIHLAVPTAGFQVGHYMLQTALYNQFFRMATRYVNRKPASEKTTYHDFLPQMFA QTSSMVLTDLILYPFETILHRMYIQGTRTLIDNMDTGMSAVSITVKYSGFFDCVKKVL ETEGFWALYAGVGAVLLEYSLHQGLQQLVRACFDRGSELLRKATQGHPVVQSSQITPP ISAKSSFNGPISSSFPPAGAAAMSPMGTPRKQSSLATPSKDPTEFPTFGETVSQMGSS PYSSRPNVFGSPPNRLPRSTHDSTQSLPPLQLNIRPSSGDPFSG" CDS join(561454..561492,561787..561930) /gene="CBG08014" /locus_tag="CBG_08014" /standard_name="CBG08014" /product="Protein CBG08014" /note="Partially confirmed by transcript evidence" /db_xref="UniProtKB/TrEMBL:A8X5L0" /protein_id="CAP27921.2" /translation="MAANQLKKDVFLTKANPAAAAPAAANNKKNQKATLKVTKGNDNM YDDYGGADDYDDYDDY" CDS join(562343..562430,563319..563548,564131..564460, 565379..565730,567401..567691,567921..568119, 568616..568798,569532..570633) /gene="Cbr-spr-5" /locus_tag="CBG_08015" /standard_name="CBG08015" /product="Protein CBR-SPR-5" /note="C. briggsae CBR-SPR-5 protein; contains similarity to Pfam domains PF00890 (FAD binding domain) , PF01593 (Flavin containing amine oxidoreductase) , PF01946 (Thi4 family) , PF07992 (Pyridine nucleotide-disulphide oxidoreductase) , PF04433 (SWIRM domain) contains similarity to Interpro domains IPR017366 (Histone lysine-specific demethylase), IPR002937 (Amine oxidase), IPR003953 (Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal), IPR007526 (SWIRM), IPR023753 (Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain)" /note="Predicted" /db_xref="GOA:A8X5L1" /db_xref="InterPro:IPR002937" /db_xref="InterPro:IPR007526" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR017366" /db_xref="InterPro:IPR036188" /db_xref="InterPro:IPR036388" /db_xref="UniProtKB/TrEMBL:A8X5L1" /protein_id="CAP27922.2" /translation="MSSESSSSESYPDEEILNYEEFGPMVDDNKLRKAAEAARLPFDR PTEHELSFFPELWESQQSVEVFLLLRNTTLATWQAHPSKECTALEVRNNVFAPFNSDL DFIQNIVQYLTRHGIINYGRYTRTTKISRFLVRSERKVIVIGAGAAGISAATQLTSFG FDVIVLEARARIGGRIQSFKTKRGNIIETGADTLRHVECSPMAALLTQVGPQGQNQAM LDEHAVFDFTTIFSDGKPLNEDKINMFLRHYDASKGALQFQSHQKEHRDENGRWISRQ QAYENIINMCERGTLIKYYNHTKQLEEVARAKELHFKQMKVARNTAIMAENRLKRMEG KDETEIDPLLRRSLKRDIVTALDKFEEISNAYEAAESSWQLLSSTPQAKQFMHPGSDF STYNFMLGFEEYLIGAQLEKVQFSADSAVNKSLGVSTRISQGLHALLLHQVRNRNMEI LLNNRVMDIDYSRENDVKLTVKNEKDEIVEMDAAFVVCTLPIGVLKKTIINDERAPTF TPRLHPKKIQAIRRMGSGLVNKCILEFEKAFWTTATSSRASQFVTVSPNVKTRGCLSI WSSTPKSTVLTTYIIGENADHELPDEVIVQNAMTVLQKTFGHQCPRSPVSAHVTRWQN DEFAFGSGSYMSLLTEKSDFDELMRPLETKDGKNRVYFAGEHTSLAYNSTVQGAWISG ARAAAELTNEHIGIGFVDMAAIERAEMGEEDLEDDQDENAIIEVDRDGPMRQEDYEQL ERMEIEAQMQLHEALAAIEAVQSAGEAVRRGTGEPIEGFRRGPRTPDSQRVFGAVQRV PNVPSEAMNTSESVPEAMDTSDATESIPEASENITSLGCESEGVQSTSEALDAIGNAP EALEIPEEASEAQEEDVPEASNAPKDIPDSPDVKIDAPEAPELAPEDVQGPSEEPQAK KAKIDEEKDS" CDS complement(join(572696..573067,573114..573257, 573580..573852,574750..574932,577109..577321, 578176..578286,580437..580541)) /gene="CBG08016" /locus_tag="CBG_08016" /standard_name="CBG08016" /product="Protein CBG08016" /note="contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR000980 (SH2 motif), IPR008266 (Tyrosine-protein kinase, active site), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8X5L2" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR020635" /db_xref="InterPro:IPR036860" /db_xref="UniProtKB/TrEMBL:A8X5L2" /protein_id="CAP27923.2" /translation="MDRMNDGGAEDGSTDSMDDVPEEERDQKNGTTSGRGADENSDKG LSDVTSDGATSSGSTATTSSGKEENPEEDYIRNHLKTYTWYHGLMFGNICDKLLKWDH SFLVRRVITKTGKFLCLSVRIASKVYHFRLRTNQHGWTCPKKLLKSNLKISKVQIIYF AMNIACGMRYIASKNVIHRDLAARNCLITKDLKAKISDFGLSRLGPQVIEKSIKKAPI RWMSPESLLTGTFNEKTDVWSYGVLLTEMMTRCAHKPLWPMGIKDAQEHIKTSDAPHR IRNGEPWELLAIVDACCDRNPETRFNFQTVKRQMRTIYTNCLAAGNQQQETNQTPIGP TSGVIPLEMKKSNDRQKTMNTTLGRKKSKDGGMIKSSKSKKSKKSKRKFFSFRRKNKN GIQLPTGMSTVPVGSPKATPTSQAPSLPTPPLNTPPLPPPQTSVTSVPSPSQNSAPPI SGPPTSTQSKSPTTTQ" assembly_gap 575062..575194 /estimated_length=133 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(582107..582235,582731..583247, 585475..585843,586029..586087,586707..587149, 588454..588627,589153..589685,590526..590897, 590974..591154,591322..591421)) /gene="CBG08018" /locus_tag="CBG_08018" /standard_name="CBG08018" /product="Protein CBG08018" /note="Predicted" /db_xref="GOA:A8X5L3" /db_xref="InterPro:IPR038751" /db_xref="UniProtKB/TrEMBL:A8X5L3" /protein_id="CAP27924.1" /translation="MDNPDTNGELSWFELFVDPTVVSKAILDPEKKKQLPKLCMQFTD KGLLAEREKERGKLAVEELMLFERKSASMKLCAMATFAALDFDIEFVIDNIHRNELLT LRVLADNFYRIYNEKNLDATFGNWLFYRFVLSIDRRNRLDPPAPRATIATTLSNGQIM PLDPASVKHEKTQRTILELKDHIMKAKAFITELSEVPRDIVAPGIQCFLKPFVELAPK AMTAAFLGDRNVLIENPSADFEAEKVILPAADVANKCLSELVVVHYTNGELLEAKKIL SRVTKPKTAHPMVAIDEDVFRAYCAILNVKGTDYSTSGAIKPYIFDLNALNDEENRKS EVWRQRGVQETSGQLQSVYKAENAACSVAENHPECIRDAIKTTAEVERFSKVLKKKLE GIRDKRRLQRIRAQLQFLCATIPDLRDILAANEVDVKGLRQFVTPSQHQNLERPPSTE QISNSLRGNDPFWALMTEFDVHILKMALVELGPFWFPLKMPVSEFLLDTLEKRANTPI YTITRLFLSKLYQLSRMHNFRGYLETLSSYNPDLGQDMGVDLAFESVYVKSLISNAHM PWKIAHWDVTNADSALIFDQKLIRVNENSAKMYNQCISLMLNLGDHQIVFDKGGQIPI DIFKCIPIARMFGAFIPATDESVAKKCADGFLRSLTPVIVGAQPPRGGMRREHDAEKK MLAFRSQLVLQYHMMSLVKQKNLLDFILAYFVFLHNRNMLAKKQSHLKIHAKLVHLYS NETITNTDIPNLDDVHQFLRMIIEKAYSISKTDEDTLRTYADFLYIEKDYQGAAQKYM EYFAVQDPLFRINFIPPDRPDDLKKMEKAPEKLYDEQIFHRLRICTAHSGFLTMSLLT CQWLRTGKSKSFTKSMRLLANNETRDVGANCAEFIIDIQAVELLSENYQANRMTKSLN TLYSGASSLSANQNVGPVLSREEMKRRTCRMLTTLSSTYFGLHI" CDS complement(join(591845..592574,592693..592813, 593224..593407)) /gene="CBG08019" /locus_tag="CBG_08019" /standard_name="CBG08019" /product="Protein CBG08019" /note="contains similarity to Pfam domains PF12697 (Alpha/beta hydrolase family) , PF03096 (Ndr family) contains similarity to Interpro domain IPR004142 (Ndr)" /note="Predicted" /db_xref="GOA:A8X5L4" /db_xref="InterPro:IPR004142" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8X5L4" /protein_id="CAP27925.1" /translation="MASIEMHSFTRDMQPLMEEAANNFAEEKVNTAFGQVKVSIYGDR KDPKKVPMITFHDLGLDSESNFQNFFQFVSIAEFADKFCIYNINAPGQEMDAQPLPEN YQYPTMDGVAKTIENVADHFKINQFIGFGVGVGANVLLRYAAQNQNRVIALILVNCCS GKSGWVEWGYEKWNASYLRKVGMTKFTVDYLMWHHFGRNYDRCSPDIVRQYRVFFQHL PNPNSLAAFIESYIQRSPLPISRDGTTGVQLKVPVLQLVGAGSAHVEDTVEVNTKLDP AHADWIKISDSCGLVLDDRPDAVTESMMLFLQGLGYFPTLNVMKMTKKMQETQNGGGF SAITSQSNEC" CDS join(595141..595208,595256..595620,595669..596072) /gene="CBG08020" /locus_tag="CBG_08020" /standard_name="CBG08020" /product="Protein CBG08020" /note="contains similarity to Pfam domains PF12695 (Alpha/beta hydrolase family) , PF00756 (Putative esterase) , PF12697 (Alpha/beta hydrolase family) contains similarity to Interpro domains IPR014186 (S-formylglutathione hydrolase), IPR000801 (Putative esterase)" /note="Predicted" /db_xref="GOA:A8X5L5" /db_xref="InterPro:IPR000801" /db_xref="InterPro:IPR014186" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8X5L5" /protein_id="CAP27926.1" /translation="MAATLVSKNQSFQGKQYVYKHASPTTQCGMTFGVYIPDHEPDEK LPTLFYLSGLTCTHANFMEKSGFQQYASKHKIIVVHPDTSPRGFDIEGDSDSWDFGKG AGFYVNATVEKWAKNYRMYDYIVKELLEEVAPSVAPIDLGRVGIFGHSMGGHGALTIG LRNPGKFKSISAFAPICNPITVPWGQKALTGYLGPDQTTWQPYDASEILKTYQGPRRE ILVDQGASDNFLEQLKPETLKPTEHAGVVLRIQPEFDHSYYFIASFMGDHFEHHARIL KA" CDS complement(join(596560..596675,597084..597270, 597323..597435,597633..597789)) /gene="CBG08021" /locus_tag="CBG_08021" /standard_name="CBG08021" /product="Protein CBG08021" /note="contains similarity to Pfam domain PF00017 SH2 domain contains similarity to Interpro domain IPR000980 (SH2 motif)" /note="Predicted" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR036860" /db_xref="UniProtKB/TrEMBL:A8X5L6" /protein_id="CAP27927.2" /translation="MMMTMANSADFGSEDHYDTPWEFLARPNSVRFSTADVRLSTTAT GDAKVSPHGSPSMCSSSSFVNQLVQIGNSAVDARRKQRDESKRRRPSDSEIHMEPNMN RVEAEKRLEHRNLGDFLLRSRGEGSAALSLRATKGVVHIKIEWNGEKWVIGEGPLFRS INSAISFYRRHPLPIRGADHLVLNHQLRPN" assembly_gap 602698..602770 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(606196..606288,606717..606815,608755..608832, 610707..610810,610874..611006,611135..611316, 617286..617373,618151..618258,618532..618630) /gene="Cbr-ndx-8" /locus_tag="CBG_08022" /standard_name="CBG08022" /product="Protein CBR-NDX-8" /note="C. briggsae CBR-NDX-8 protein; contains similarity to Pfam domains PF10601 (LITAF-like zinc ribbon domain) , PF00293 (NUDIX domain) contains similarity to Interpro domains IPR006629 (LPS-induced tumor necrosis factor alpha factor), IPR000086 (NUDIX hydrolase domain)" /note="Predicted" /db_xref="GOA:A8X5L7" /db_xref="InterPro:IPR000086" /db_xref="InterPro:IPR006629" /db_xref="InterPro:IPR015797" /db_xref="UniProtKB/TrEMBL:A8X5L7" /protein_id="CAP27928.2" /translation="MKEPKYLLSRGDEIKKQLDLTDDPSKPQKEQDAGVLILLHDDGE SEIKVLLCVRSLQMRRHPGEVCFPGGMMDDEDGNDVRRTAIREAYEEVGIKETEDYVV LGNLPAFRARFGILIHPTVALLRRRPTFSLSQNEVDSIFWIPLSEFLDSTFHSTFAVE KYYMVHMFQFEEYPLTYGITALMCIIVAIGILEKVPNFSLMSNLTLEIMKEQQLSSLK IIRHVYQFSGNKSASHTPSMLVNAKKYLSDRPQLLDCPRCKNHGETELRFVNGFFTYL SFFVILIFGVTILPLFFLWVPFCVETFKDAEHYCPSCRAWIGTYRRLGKST" CDS complement(join(619696..619896,622082..622171, 622309..622368)) /gene="CBG08024" /locus_tag="CBG_08024" /standard_name="CBG08024" /product="Protein CBG08024" /note="contains similarity to Pfam domain PF10601 LITAF-like zinc ribbon domain contains similarity to Interpro domain IPR006629 (LPS-induced tumor necrosis factor alpha factor)" /note="Predicted" /db_xref="GOA:A8X5L8" /db_xref="InterPro:IPR006629" /db_xref="InterPro:IPR037519" /db_xref="UniProtKB/TrEMBL:A8X5L8" /protein_id="CAP27929.1" /translation="METKPEAPPSYTPEEDVEQNATPQNDSRYITSRASPYNVMPIEM DCPHCQNHIVSHIEFVSGILPWIICAIFAFLGLFLFIIPWCFCCVPFFLDQLRDVTHT CPACKKFLGRFSRV" assembly_gap 620115..620875 /estimated_length=761 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(622661..623035,624526..624978,626396..627360, 628148..628331) /gene="CBG08025" /locus_tag="CBG_08025" /standard_name="CBG08025" /product="Protein CBG08025" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X5L9" /protein_id="CAP27930.2" /translation="MSSLDAIVKNAEDIAFQEGEEIIEEVIDGGEVWMGEIGAEDSAY YQAHDLMEHQIVEYDDPDAYQSFLPVRGGDPFYSMNLPDLMSRIHDITQEDGSVVRLV SCFNRKCQRQVAFKGFLYTIKDWVSETEWNTWKCINDQCFGELRTVPDFSNIEIAREH VESCPSDETQIVIRLGVYDARLLAEFTETSLPELYENVKEKVKGDFPEIDKELFPSFL AINDTLKDHRHNRIYRKRFEMQKFKDKQRKLNMTADEVLYAENGCGLIKARRTKPFPL IVSKQETARITIDYCLEHQPHPYDPRYQPRGARPPPTSSMFHQREYIDYYTPEVFMRD QEDRRIRSQKIQGEHVSIVSSEKRPIEVKTYCPPGRIRASFGTRALAPPLAAQLAAGT TQPFVNAYDDVESSSPKRQAPPRNVLYNRQSIRNYKDEQPPAPEPRVQEEDPNLPPPR IYLTQKPYTRMTERQNFKDIYTFNAICKVEDSCLSLLNRLQSCQHARVGLGYKEKIQA ILRNTNSDPGLIDGSTEEEMRESWVLQKPTRGRPRKRQKMEEEGEEDGEDDDVEIEER IREEEQEIVVEEKEIHEDTRVVQQDELKDIPLLPEHSQTTQPSTSAASEDVIPQVQRS ETLESTSSTASHVASDGTTRSGRARKTPSRLLEQ" assembly_gap 623365..624151 /estimated_length=787 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 625417..625721 /estimated_length=305 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(628815..629204,631591..631692)) /gene="CBG26567" /locus_tag="CBG_26567" /standard_name="CBG26567" /product="Protein CBG26567" /note="Predicted" /db_xref="GOA:B6IH01" /db_xref="UniProtKB/TrEMBL:B6IH01" /protein_id="CAR99181.1" /translation="MINQYLKILQDKIRNHIRSVDSGNAILFFCVSAITVFLLCVLSS PTIQETWHQRNNRVPSQNPRGIENKSIPEKIKSGGKRKRRFAKKDIRAMEMEEKQRKK EEKKEESRAERLRQKQTENGQQKKVQKASMKKNSSKNAGIPVENRQKKTIGVMTNVPT KRS" assembly_gap 630351..630650 /estimated_length=300 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(<633580..633824,634513..634744,634793..634958, 635025..635275) /codon_start=1 /gene="CBG08027" /locus_tag="CBG_08027" /standard_name="CBG08027" /product="Protein CBG08027" /note="contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domain IPR000535 (Major sperm protein)" /note="Predicted" /db_xref="GOA:A8X5M0" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR016763" /db_xref="UniProtKB/TrEMBL:A8X5M0" /protein_id="CAP27931.1" /translation="DLSKVVFNPSKSFTFQPVQRKQQASLEITNNSTSAVMVKFKNTN PSVFSTVPKLHNLGIGEKFTFKCNFRGLAKEKCKKNDRYTVVLIAVSKNANMERIKGK EHSTATLKHMIHIVYPGVNDEKENQQPTQNDDEEDKDRKGRMRAKTKVEAPAAQVKKA KLIFLTRPEEESVSDEDEGGPSPKSDAPPPSDDMMTTRPAGFFNGQVASNGAPGGAPA GGAADPKSLGMLTTRPAGQFTGQQVGGASADPKSAGMMTTRNAGAFNGQVMPNQGGEG GEALKTTKQAGSYENPQQKNK" CDS 644640..644903 /gene="CBG08030" /locus_tag="CBG_08030" /standard_name="CBG08030" /product="Protein CBG08030" /note="Predicted" /db_xref="UniProtKB/TrEMBL:G2J6L8" /protein_id="CAP27932.1" /translation="MSRSKCANRAPARNRLKRTSYLYVKGAESEHVAMKENAGTVLLK QKKKKTPAESSVFVNRCHLAEVNEVEEDAEDTLSITDYGYSGN" CDS complement(646426..646689) /gene="CBG08031" /locus_tag="CBG_08031" /standard_name="CBG08031" /product="Protein CBG08031" /note="Predicted" /db_xref="UniProtKB/TrEMBL:G2J6L8" /protein_id="CAP27933.1" /translation="MSRSKCANRAPARNRLKRTSYLYVKGAESEHVAMKENAGTVLLK QKKKKTPAESSVFVNRCHLAEVNEVEEDAEDTLSITDYGYSGN" CDS join(649263..649332,649470..649798) /gene="CBG26568" /locus_tag="CBG_26568" /standard_name="CBG26568" /product="Protein CBG26568" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IH02" /protein_id="CAR99182.1" /translation="MYPILPLPSLLGSLTIEEIHHGADHGRLEGSLLGDAPEQQGGGQ PYAGLLALRDQRCPLVPKAENPSEDKIDGENVQKAPEVDSAEKLEIEDDPEAKKEDDG YDLLDEIKTEEIIEEESFVVLFNKTITFPK" CDS join(650791..650840,650911..651047,652299..652426, 653104..653365,653411..653555,653825..653923, 653977..654037) /gene="CBG08033" /locus_tag="CBG_08033" /standard_name="CBG08033" /product="Protein CBG08033" /note="contains similarity to Pfam domain PF02551 Acyl-CoA thioesterase contains similarity to Interpro domain IPR003703 (Acyl-CoA thioesterase)" /note="Predicted" /db_xref="GOA:A8X5M3" /db_xref="InterPro:IPR003703" /db_xref="InterPro:IPR029069" /db_xref="InterPro:IPR042171" /db_xref="UniProtKB/TrEMBL:A8X5M3" /protein_id="CAP27934.2" /translation="MVREWRRLKKIDDLTYIGECDSEHPAARVFGGHVLAQAMSAAYY TAPEGFYVHAVHCYFIRGGEESIPITYNVKIIRDGRNFAIRYVEAVQHGKVIHLAEFS LQKLASVKDTFSLTPEFPTHVPGPDGLISNISGRHQKVAEGFDARELRGQVTERMAPS LEIRPADLNMFLHGTGGINQKQYLWIRYKIPVDKTDYMLRHATIVYLSDLELVTTGAL CFDDKMFKLQTSMDHSAWIHQYEFDINDWILYEQECVANSNHRSLIHGRLWSRDGKLI MSTSQEALIYKVQPSKI" assembly_gap 651107..651893 /estimated_length=787 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(655318..655507,656673..656900, 657932..658014,658097..658171,658223..658294)) /gene="Cbr-aex-6" /locus_tag="CBG_08034" /standard_name="CBG08034" /product="Protein CBR-AEX-6" /note="C. briggsae CBR-AEX-6 protein; contains similarity to Pfam domains PF00071 (Ras family) , PF00025 (ADP-ribosylation factor family) , PF08477 (Miro-like protein) contains similarity to Interpro domains IPR002041 (Ran GTPase), IPR013684 (Mitochondrial Rho-like), IPR003578 (Small GTPase superfamily, Rho type), IPR005225 (Small GTP-binding protein domain), IPR001806 (Small GTPase superfamily), IPR003579 (Small GTPase superfamily, Rab type), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR020849 (Small GTPase superfamily, Ras type)" /note="Predicted" /db_xref="GOA:A8X5M4" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR041837" /db_xref="UniProtKB/TrEMBL:A8X5M4" /protein_id="CAP27935.1" /translation="MGDYDYLIKFLALGDSGVGKTSFLHRYTDNSFNGQFISTVGIDF KEKKVVYKSAKGGFGGRGQRVLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQ SFLNIRDWLSQLKVHAYCEQPDIIICGNKGDLENRRQVSTARAKQLADQLGLPYFETS ACTGVNVEKSVDCLLDLVMQRIQQSVETSSLPLSECRGVSLDGDPNASTSYCANC" CDS complement(join(660955..661023,661072..661197, 661642..661871,662264..662566,663194..663764, 664090..665192,665971..666652,666813..666956)) /gene="Cbr-vars-2" /locus_tag="CBG_08035" /standard_name="CBG08035" /product="Protein CBR-VARS-2" /note="C. briggsae CBR-VARS-2 protein; contains similarity to Pfam domains PF09334 (tRNA synthetases class I (M)) , PF00133 (tRNA synthetases class I (I, L, M and V)) , PF08264 (Anticodon-binding domain of tRNA) contains similarity to Interpro domains IPR015413 (Aminoacyl-tRNA synthetase, class I (M)), IPR013155 (Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding), IPR002300 (Aminoacyl-tRNA synthetase, class Ia), IPR002303 (Valyl-tRNA synthetase), IPR001412 (Aminoacyl-tRNA synthetase, class I, conserved site)" /note="Predicted" /db_xref="GOA:A8X5M5" /db_xref="InterPro:IPR001412" /db_xref="InterPro:IPR002300" /db_xref="InterPro:IPR002303" /db_xref="InterPro:IPR009008" /db_xref="InterPro:IPR009080" /db_xref="InterPro:IPR013155" /db_xref="InterPro:IPR014729" /db_xref="InterPro:IPR033705" /db_xref="UniProtKB/TrEMBL:A8X5M5" /protein_id="CAP27936.2" /translation="MADAKPKTEKELKKEAEKAAKIAKFEEKQKKLAEQKAKAAASDK PAKEKLQTTLILQTKAKKDPTANAIPVDTTTPGQKKDISSEIPSAYSPSYVESAWYSW WEKEGYFKPEYVDKLNPGSNTESFTICIPPPNVTGTLHVGHALATTVEDTITRFNRMH GKRTLFNPGCDHAGIATQVVVEKRLKRERGLTRHDLGRDRFNQEVWHWKNEKGDVIYD QFRKLGASVDWDRAVFTMDPKMCRAVTEAFIQMHESGTIYRSNRLVNWSCALRSAISD IEVDKKELTGSTLIAVPGYDQKIEFGVLNSFAYKIEGSDEEIVVSTTRIETMLGDSGI AVHPDDQRYKHLVGKKCIHPFIASRELPIFADSFVEMEFGTGAVKITPAHDHNDYEVG MRQKLPFHNCITDDGLISNGCGEFSGMKRFDARNAVIEALKAKGLYRGKEDNPMVVPT CSRSKDVIEPILKPQWYVKCDHMAEKAMSAVANGDLQIIPEFHKATWNRWLESSRDWC ISRQLWWGHRIPAYYVSFTDKREQPLAEEEYWVSAKTEEEARQKAAKKFQVAEDLIQL KWDEDVLDTWFSSGMWPFAVFGWPDNTKDMDLFFPSAVLETGHDILFFWVARMVFMAQ ELTGKLPFKVIKGVRILKKEILLHAMIRDAHGRKMSKSLGNVIDPLDVIRGVTLEGLQ AQLLSGNLDEKEIAVAKAGQARDYPDGIPECGVDALRFALLNYTSQGRDINLDVLRVQ GYRFFCNKIWQAVRFSLNQFNEKPEQKPTFNIDLSKATPTDKWILSKLAKAVKETNET LKVYNFTQATSITYNFWLYDFCDVYIEAIKPVLYGDNPTLRQIAISVLHLCVDTGLRL ISPLMPFISEELWQRLPRLADSDYSAPSIMVAQYPLTERYEKYQNDKLEAAFEFAKEV VGKVRSLRADYDLTARTKITIQILAETADDQSMLNDLSDVIATLTWSKSVTILAKSES DKIEKGSAHIACGSRCQVYINLTGIIDTVKEVGQNESKFIEKLGAKLQKNQISVKKIS DIQSTADYEQKVPSGIRARDQEKKASLEKEIENITAAIAQLKALN" CDS complement(join(667650..667777,667828..668026, 668612..668754,668805..668847)) /gene="Cbr-ubc-14" /locus_tag="CBG_08036" /standard_name="CBG08036" /product="Protein CBR-UBC-14" /note="C. briggsae CBR-UBC-14 protein; contains similarity to Pfam domain PF00179 Ubiquitin-conjugating enzyme contains similarity to Interpro domains IPR023313 (Ubiquitin-conjugating enzyme, active site), IPR000608 (Ubiquitin-conjugating enzyme, E2)" /note="Predicted" /db_xref="GOA:A8X5M6" /db_xref="InterPro:IPR000608" /db_xref="InterPro:IPR016135" /db_xref="InterPro:IPR023313" /db_xref="UniProtKB/TrEMBL:A8X5M6" /protein_id="CAP27937.1" /translation="MAGYALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGP EETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYPDGRVCISILHAPGDDPTG YESSNERWSPVQSIEKILLSVVSMLAEPNDESPANVNAAKMWREDRAQFEKTADALVR KTLCLPASEV" CDS complement(join(669101..669224,669924..670519, 671035..671854,672517..672635)) /gene="Cbr-gpi-1" /locus_tag="CBG_08037" /standard_name="CBG08037" /product="Protein CBR-GPI-1" /note="C. briggsae CBR-GPI-1 protein; contains similarity to Pfam domain PF00342 Phosphoglucose isomerase contains similarity to Interpro domains IPR001672 (Phosphoglucose isomerase (PGI)), IPR018189 (Phosphoglucose isomerase, conserved site)" /note="Predicted" /db_xref="GOA:A8X5M7" /db_xref="InterPro:IPR001672" /db_xref="InterPro:IPR018189" /db_xref="InterPro:IPR023096" /db_xref="InterPro:IPR035476" /db_xref="InterPro:IPR035482" /db_xref="UniProtKB/TrEMBL:A8X5M7" /protein_id="CAP27938.1" /translation="MSLTQDAAFVDLKNYVEANEKDVQLLDWFQKDQSRFEKFTRHFK TPDGDFLFDFSKNRITDESFQLLMKLAKSRGVEESRDAMFSAEKINFTENRAVLHVAL RNRANRPILVDGKDVMPDVNRVLAHMKEFCNEIISGQWTGYTGKKITDVVNIGIGGSD LGPLMVTESLKNYQIGPNVHFVSNVDGTHVAEVTKKLNAETTLFIIASKTFTTQETIT NAETAKEWFLSKAGDPAAVAKHFVALSTNVLKAVEFGIDEKNMFEFWDWVGGRYSLWS AIGLSIAVHIGFENYEKLLDGAFAVDEHFVNTPLEQNIPVILAMIGVLYNNVYGAETH ALLPYDQYMHRFAAYFQQGDMESNGKFVTRHGTRVDYSTGPIVWGEPGTNGQHAFYQL IHQGTRLIPADFIAPVRTLNPIRNGLHHQILLANFLAQSEALMKGKTAAVAEEELKAS GMSAESIAKILPHKVFEGNKPTTSIVLPIVTPFTLGSLIAFYEHKIFVQGIIWDICSF DQWGVELGKQLAKVIQPELASADKVTTHDASTNGLIAFIKNNNA" CDS complement(join(673899..674180,674585..675013, 675163..675257,675324..675425,677091..677775)) /gene="CBG08038" /locus_tag="CBG_08038" /standard_name="CBG08038" /product="Protein CBG08038" /note="contains similarity to Pfam domain PF11977 Zc3h12a-like Ribonuclease NYN domain contains similarity to Interpro domain IPR021869 (Ribonuclease Zc3h12a-like)" /note="Predicted" /db_xref="InterPro:IPR028079" /db_xref="UniProtKB/TrEMBL:A8X5M8" /protein_id="CAP27939.1" /translation="MDYLNQMIDENEDIVYRNRINPPSYGRVFPTTQSQGPAGPSSSS NRRNPEEERPIHSAENRDIPLNAQAEWDLNDALRASISKKQRNQNSRNPRSSRYRHED DGDEEDVPQAKWNKLEADLKELSIFLKSQQAEKALETRPDKKYRNLVESEKSIKIFSK KDSGYRILQEQRSEKEQLEIDFSNFEMLKFAFSRHPEVLNMDWNPMEVQIFYKIDRFI GDNEETAFRQGALSVAMDFENFPPNLTWRGSGNKGLVMLRPVVIDGVAVLNATLPDDS PQPFYGIAPEMPIYQEILNLPVKAVFDVIMNFVIRGHKTCVFLPKYYKNYITPGRISK VDDLVVFRKLIDLGLIKFLENREGRESWNWFLEISRIVDQTGSVFVSSLEYRRKPEDQ KYEKPSDRIIQPIFWNTFDRVMVLEPSIRYKDENDNSFRTITAEQVLQFAEPDDERAQ LGEQLYLDKQIELICHLCQLYPTKSMHKVSIQQLLHLVVRANSNFDMPGMNLETYLGM CERFGNHQNDAEDCVDDNNSNV" assembly_gap 676506..676553 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(678188..678805,679553..680356,681191..681580, 682136..682243) /gene="Cbr-cyn-15" /locus_tag="CBG_08039" /standard_name="CBG08039" /product="Protein CBR-CYN-15" /note="C. briggsae CBR-CYN-15 protein; contains similarity to Pfam domains PF00160 (Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD) , PF00400 (WD domain, G-beta repeat) (2)contains similarity to Interpro domains IPR002130 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain), IPR001680 (WD40 repeat), IPR020892 (Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site)" /note="Predicted" /db_xref="GOA:A8X5M9" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR002130" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR020892" /db_xref="InterPro:IPR029000" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:A8X5M9" /protein_id="CAP27940.2" /translation="MEDDKAPSTSEPVFKEPSPKKPKRPAQDLPEDQQQPKKAQLKHE SEFLRSIPSSSQYEKSFMHRDTISHVIATKTDFIITASVDGHLKFWKKKHSEGVEFVK HFRCHLSEFSHICANIDGTLLATVCEADKSVKVFDIENFDMINMIKLDFPPKTAMWVH QSNDPTAHLAIGAADSGKVIVVDGKASATPICVKDKLHSTPVRAIEYSQSLDMIVSID ESGIIECWSGDRGDFEFPQSKLSWEYKLETDLYDFVKAKTIPVCAAFDPSGIKLATFA EDRKVRVFNVKTGKLIVTIDETTHRYQIEAKENKNYGLQHMEWSRRLAAEKEMDKDKK NSLKYSKLCFDESGNFLLYPTPIGVKVYNLYTKEVSRTIGRDESIRFVAVSLCNALPD IRSKLQGAAITLETAAADNPTLNKKTDPDPLMVCCALRKNRFYLFTNTEPFNVEDDEG NPSVSGRDVFNERPKKEDLLTALDTEGGEKVLNKEAVIHTSFGDITIRLFGDECPKTV ENFCTHSRRGYYNGLTFHRVIKSFMIQTGDPTGKGTGGESIWGEDFEDEFHPRLRHDK PFKVSMANAGGGNTNGSQFFITVCPADWLDGKNTLFGEVTAGMSVVQRVNQVPTFERS GRPRETIQIMSISLK" CDS complement(join(682418..682773,683146..683359, 683632..683742,685068..685184)) /gene="Cbr-grd-15" /locus_tag="CBG_08040" /standard_name="CBG08040" /product="Protein CBR-GRD-15" /note="C. briggsae CBR-GRD-15 protein; contains similarity to Pfam domain PF04155 Ground-like domain contains similarity to Interpro domain IPR007284 (Ground-like domain)" /note="Predicted" /db_xref="GOA:A8X5N0" /db_xref="InterPro:IPR007284" /db_xref="UniProtKB/TrEMBL:A8X5N0" /protein_id="CAP27941.1" /translation="MAATAFAENILVISSIFLISTVYLVVSIPVTHVDSAGEEKYSAA PNNTPISKVYIFGRPIYIREPFVIPQRNVSENIDFSKLFDQSKLRKNRASYTEEQGRQ GNQPEQGRYNTNSYQNGYKQPADEYADEYPWPGKYPLRQCYTETSGYMCCNLHLEKVI HNATQKMKESKACNLQKMATMLADVTEDVFGTDFEAVAAVGDFASKIHFYSDYVCKMQ RDGRTILVYATPSRHNGTGKYSNDRNGNGGNGNGKNGGNYLVTPYTL" CDS complement(join(686367..686667,686719..686865, 687331..687419,687464..687664,688564..688824)) /gene="CBG08041" /locus_tag="CBG_08041" /standard_name="CBG08041" /product="Protein CBG08041" /note="contains similarity to Pfam domain PF03567 Sulfotransferase family contains similarity to Interpro domains IPR005331 (Sulfotransferase), IPR007669 (Protein of unknown function DUF595)" /note="Predicted" /db_xref="GOA:A8X5N1" /db_xref="InterPro:IPR005331" /db_xref="InterPro:IPR007669" /db_xref="UniProtKB/TrEMBL:A8X5N1" /protein_id="CAP27942.2" /translation="MLPNRRLQLRFISFFTIFAIFCLFYSDFRKFEFSKISNFTEIII FSTTKSSTKIPKTPKLYKLLNWEKRESEKRLNKIDDLIRVNLNTAPRYQLSTCVVQKS MSTVMTSMFCYLRDEKKFIGNHRELLKDWKIIRFCMFKNEFRNLGGIQKKFKLPTPNN WTHIMMVRHPFERFVSGFVDKCYRKPVIQKYCNGCARNLTCFMETELARMWGQIERGS FQKTYEDRHFFPQSWRCNLHQYFQNFTFIPYSSSHNFSITSKLFPIFREHSVPESSLT YIQTALSSGRTAHSTVDSKATSFIEKRLRSSPYLMELLVKMFYHDFVLFNFTLPAI" CDS complement(join(691445..691564,691618..691689, 691738..691872,691923..692185,694054..694246, 694252..695081,695838..696033)) /gene="Cbr-png-1" /locus_tag="CBG_08042" /standard_name="CBG08042" /product="Protein CBR-PNG-1" /note="C. briggsae CBR-PNG-1 protein; contains similarity to Pfam domains PF03835 (Rad4 transglutaminase-like domain) , PF01841 (Transglutaminase-like superfamily) , PF00085 (Thioredoxin) , PF04721 (Domain of unknown function (DUF750)) contains similarity to Interpro domains IPR005746 (Thioredoxin), IPR002931 (Transglutaminase-like), IPR018325 (Rad4/PNGase transglutaminase-like fold), IPR013766 (Thioredoxin domain), IPR017937 (Thioredoxin, conserved site), IPR006588 (Peptide N glycanase, PAW domain)" /note="Predicted" /db_xref="GOA:Q5WNE3" /db_xref="InterPro:IPR002931" /db_xref="InterPro:IPR006588" /db_xref="InterPro:IPR008979" /db_xref="InterPro:IPR013766" /db_xref="InterPro:IPR017937" /db_xref="InterPro:IPR036249" /db_xref="InterPro:IPR038680" /db_xref="InterPro:IPR038765" /db_xref="UniProtKB/Swiss-Prot:Q5WNE3" /protein_id="CAP27943.3" /translation="MPVREVSRLPELNEILEKSDSNRLIIVDFFANWCGPCRMISPAF ERLSMEFGNATFLKVNTDLARDIVMRYSISAMPTFLFFKNKQQVDSVRGANESAIIST IRKHYSSTPANPNAASDEEKKFLERFVGYTELRKMHTDEVFKALARSVMPDGISDRLE NGEDEKKVLQELLDWFKNDFFTWFDRPTCLKCTLKCTTEGLNGTPTKEEKEGGAGRVE VFICNGCNSEMRFPRYNDPSKLLQTRTGRCGEWANCFGLILSAAGLENRFVLDTTDHV WNEVYLKKEQRWIHVDPCENTMDRPLLYTRGWKKQLKYCIAYGHDHVTDVTWRYVFDS KKLVTQERVRQGVLENFLGKLNARQMAGATEERKRELAVRRVCELMGMMVQEAKNQRI GWEKLGEDMGGRTTGSKEWRRARGELGDNPEAQVLGKPIEFRIQNDANHVEFSYDVNR DSYSQTPEKGFVAQTFECNNIQRKVENDWKMVYLCREDGKKEGNISWHFNLAPLVATD SKKTIEKVEIRMAGIRKFENGNILIIACLGDTCMRIPASGNLTIEDPKPEVLKITVTL SGGERNQAFQHAQLFRTEKDDVAEATESMVVRVYMK" CDS join(692624..692937,692988..693231) /gene="CBG08043" /locus_tag="CBG_08043" /standard_name="CBG08043" /product="Protein CBG08043" /note="Predicted" /db_xref="GOA:A8X5N3" /db_xref="UniProtKB/TrEMBL:A8X5N3" /protein_id="CAP27944.1" /translation="MVPYEDCXKRTDHEKECDLYYSCXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXFVGMYQTMTIVETIVCMLVPSVLIIACNCLVVSKLNS HIKKNPGSPAVSFNTADIVLTTQTSAPSNTLKSYTRISSRFSIDVEKTPKKKKKGIRY TDIQLTRSLLVVTWAFIVLTIPSXF" assembly_gap 692695..692816 /estimated_length=122 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(696226..696291,697403..698304, 698355..698754,698809..698859)) /gene="CBG08044" /locus_tag="CBG_08044" /standard_name="CBG08044" /product="Protein CBG08044" /note="contains similarity to Interpro domains IPR003604 (Zinc finger, U1-type), IPR001202 (WW/Rsp5/WWP)" /note="Predicted" /db_xref="GOA:A8X5N4" /db_xref="InterPro:IPR001202" /db_xref="InterPro:IPR003604" /db_xref="InterPro:IPR040023" /db_xref="UniProtKB/TrEMBL:A8X5N4" /protein_id="CAP27945.1" /translation="MAEQWVSTGKRFCEICKVWFGNNKASQDHHDRGERHKAMLQQRI RETMQKGKKQELADAKLNGTLARMEAAAAASMSRNGEGIVAGPSLPSTGLRMNIFDPN KHKDVGSMAREMASRREAGAMKRGAAAPAGAAPDLKISKGDVVSAYRDLTNPNAAGPA LPEHLAVGYLPETQTQCAEISWVRARNPDGPGHYYWNLFDNSTRWDTPNHFYTEQQYE EKCREFEEQRKKNYYGMDEVQAVRSGKNDVSAFIKSQLAKNGMAEQVEANRKEQNYTD RPRKGQKLTKEEKKALWKEKCAERERKRREEEAKEEEDVEEDDEDDYSDEEDVDDEEE EFEIVGTPEREAMMDQEKDMMLQAPPPPPEEEEAPEPEKVPEIGLIEPPKPSIPTPGN PFGAWVRVTKEEKQEVFESPLTARFREEEAQREEEEEKKRAEEPKFEFGEKTATVMTK KVKGPIEFKKKAGGRNIRKRED" CDS join(699080..699243,699338..699572,699630..699739, 700568..700908,702847..703085,703878..704025, 704093..704229,704333..704612,705306..705490, 705793..706127,706687..706802,706848..706997, 707406..707587) /gene="CBG08045" /locus_tag="CBG_08045" /standard_name="CBG08045" /product="Protein CBG08045" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X5N5" /protein_id="CAP27946.2" /translation="MLEEPPILTEEEAKEILDGVSFFSLEFDDIQGLATFMLAHARQL PESEYVIEVFRRYCYGVVRCVEVDRKCSKRFIPNFISSIQHLKDAEKVIQAVYEVLLS LPMMLQARWDLLTMLASSRMIEDLDEVLFKEVMSCSPDQDLAARCSSTMLQMAANPKT SEKAAEIVFRGLTSPIFATRNNVTRSWLCRIINMKSSQKCIEKVLELCREEVIRSHSK MWPVAFREISGLTCVDLQWKPVLEEEPYDTLTFALMGYFSVLLALKHSSSQVHVKLKH DDVVVAKGIEFLGAICSKQAFTVCSKYKIYPPNLERAVIMEMTSPRNPDIYDIIDEDM VKSFSSETQMHFTKEKLKWLITQKQNETMTLEAHRAEILAKMDQKFYPAEDDGSLRVE INLRTELAAQNTLKRFLKVQHPTDEYPSVAAVMEHLSLQDIDERWSCQKINKINDTVE RCSGIGSLSVVDYVGTXIKEESKKEIMIREKIFKMACDLMILDDENARPLSLYHCFIA TCYLEPVKVTEVWNICRSLKSGIKKRKMAEMLSKVVTSSEIRVEPDVLHDIIVCCLGI HPFRFDIESTQLFVAAVSKLLAFRNESERIMLFEAIADQPEILDLVRIQEILCHSADQ FSSAAFQMVLFFFTRFHVGAIEFYPEEHLRTISQIVNFCHWSIRKFAGETMMLSIAID AICGFLPWSYLREKALLKDGGADEIEDPVEKLIVRNLRHNRFCVLLSEHDKDDVMMTI EDFELLPQAQFIVEILKNKDKGKEPLNALAQKLAKLVVAAKSFEEIHAVWLAYGLLSD KAVELIEEAEKYKGKEKDWKLRYPSRTLMDSLVDAGAGFHTTVSDLRMANSWLDKGLG KIQILTDKKFCLEDCPP" CDS join(708839..708912,711311..711922,711970..712528) /gene="CBG26569" /locus_tag="CBG_26569" /standard_name="CBG26569" /product="Protein CBG26569" /note="contains similarity to Pfam domain PF00646 F-box domain contains similarity to Interpro domain IPR001810 (F-box domain, cyclin-like)" /note="Predicted" /db_xref="InterPro:IPR001810" /db_xref="UniProtKB/TrEMBL:B6IH03" /protein_id="CAR99183.1" /translation="MVSTLFNIPSRVIRDNLNEMDPLKLFSLSLESLESSRDIKYYGP KNLLLDICSDGEVGLFEITAKDGTFPIHILQKKSANTLEINTYSILEATVDIHFDSKF VSVFCDNLRIGMRVVLLHLKEIFGCRVGICKLENFWRDYKDVGDDLGSEELNLEGIEE PKIEKICANKVYSILPFKKPSRQGVNLESIKKLEDLLNYPSIQKSRFPLLQLPGLDLE NVFKEMEVMDLISLSMTSKKLQRLISQTSASMDPIAHLEVYAYEKVSHVEIHTSNDVI KIHSLQKDPKSLKGIFDVEDYCINGTKVPTHIDSKFMTTFWRDHIQGMGIIVQYLMDL LDCKVQKLDIEYMEEEKKSLLVDVIADKQSEIEELIGSNDRRLRIKKSSARACEVGIN RANLQLKLVFRTTVTSAGNVMQ" CDS complement(join(716818..718024,718237..718290, 718347..718406,718452..718496,718543..718620, 718939..719082,720045..720275,720346..720425, 721473..722133,722341..722381)) /gene="CBG08047" /locus_tag="CBG_08047" /standard_name="CBG08047" /product="Protein CBG08047" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X5N6" /protein_id="CAP27947.2" /translation="MDPERTYTPPLIRSRGNTWTTENFPIVRVPSAQFTDIMTEVYDY HEVNEVALKNMKNGLENQNFQKFTRRSVSPDVLIRQEDVPKAPILHVIPPTPEKNTPR YGIPLTTSEFQKPLPMYEEYVRMQKDKENRNLITTSSESRSSEFKDSECHVNNNLRHI DSSSSESSESFQKTSSEIQNRPEDVRRHQNLPEDVGKRYVYSHDVYVDSTTGRPYTPG SEELRDRKNCDKLKINVYFTPPHPPVEATYKLDEIEIEKHEDIYKLRPSRSATILSAN SSSNPSFHPEVSTENPQEMSQNYRRIPTSTSILRKEHEILTVPLNRSQSARQSRISEH STRRSASKTITERSIPVNSGDTVSINMDEIFPKMTNSTVTRIPETRGSIDKSDYPRRV PSVVPSHPRRQETPELQFTRKLSKTPSVQEYKVKRQSERSPSFISSHAPSQKSERSPS EVRIPVTVAHGQQNRPIEKRQSPEELDYGRFPENRNVKDLPYTRGVSKTPSDKTERYS NPTVDPKNVHIPYNSTEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXAYPAR" assembly_gap 716838..717837 /estimated_length=1000 /gap_type="between scaffolds" CDS join(725707..725846,726344..726445,726494..726560, 726870..727062,727580..727746) /gene="Cbr-pisy-1" /locus_tag="CBG_08048" /standard_name="CBG08048" /product="Protein CBR-PISY-1" /note="C. briggsae CBR-PISY-1 protein; contains similarity to Pfam domain PF01066 CDP-alcohol phosphatidyltransferase contains similarity to Interpro domains IPR014387 (CDP-diacylglycerol-inositol 3-phosphatidyltransferase, eukaryote), IPR000462 (CDP-alcohol phosphatidyltransferase)" /note="Predicted" /db_xref="GOA:A8X5N7" /db_xref="InterPro:IPR000462" /db_xref="InterPro:IPR014387" /db_xref="UniProtKB/TrEMBL:A8X5N7" /protein_id="CAP27948.1" /translation="MESSPSTTANNNNVWLFYPNLIGYGRIVLAILAMYYMSSSPVCA MLCYALSAGLDAFDGWAARTYNQSSRFGAMLDQLTDRCALLALVMALCKFFPDHLFLL QLSAVIDIASHWLHLHATDLSGASSHKQSSNWLLNLYYTDRMFLGFMCGGNEAFYILL YIRAFWAGPLIFGAFHFMSIFPLIAFPIAFVKSAISVVHLYTAAEMVVAHDVKLRENA QKAK" CONTIG join(CAAC03000158.1:1..3495,gap(147),CAAC03000159.1:1..3886,gap (266),CAAC03000160.1:1..10530,gap(275),CAAC03000161.1:1..40200,gap (1718),CAAC03000162.1:1..2715,gap(221),CAAC03000163.1:1..16286,gap (148),CAAC03000164.1:1..8647,gap(1270),CAAC03000165.1:1..57003,gap (339),CAAC03000166.1:1..35931,gap(25),CAAC03000167.1:1..2531,gap (300),CAAC03000168.1:1..57844,gap(179),CAAC03000169.1:1..4902,gap (382),CAAC03000170.1:1..15854,gap(762),CAAC03000171.1:1..50160,gap (178),CAAC03000172.1:1..17534,gap(433),CAAC03000173.1:1..7584,gap (311),CAAC03000174.1:1..6676,gap(351),CAAC03000175.1:1..7393,gap (50),CAAC03000176.1:1..15912,gap(387),CAAC03000177.1:1..15944,gap (371),CAAC03000178.1:1..73382,gap(460),CAAC03000179.1:1..3315,gap (432),CAAC03000180.1:1..2409,gap(229),CAAC03000181.1:1..33177,gap (91),CAAC03000182.1:1..2464,gap(690),CAAC03000183.1:1..4330,gap(10) ,CAAC03000184.1:1..1265,gap(764),CAAC03000185.1:1..3669,gap(10), CAAC03000186.1:1..9024,gap(837),CAAC03000187.1:1..7519,gap(413), CAAC03000188.1:1..1798,gap(823),CAAC03000189.1:1..3398,gap(504), CAAC03000190.1:1..5369,gap(167),CAAC03000191.1:1..2272,gap(49), CAAC03000192.1:1..27051,gap(133),CAAC03000193.1:1..27503,gap(73), CAAC03000194.1:1..17344,gap(761),CAAC03000195.1:1..2489,gap(787), CAAC03000196.1:1..1265,gap(305),CAAC03000197.1:1..4629,gap(300), CAAC03000198.1:1..20456,gap(787),CAAC03000199.1:1..24612,gap(48), CAAC03000200.1:1..16141,gap(122),CAAC03000201.1:1..24021,gap(1000), CAAC03004061.1:1..10044) //