LOCUS HE600986 922891 bp DNA linear CON 17-SEP-2015 DEFINITION Caenorhabditis briggsae AF16 supercontig from assembly CB4, cb25.fpc0143b. ACCESSION HE600986 CAAC03000000 CAAC02000470 VERSION HE600986.1 DBLINK BioProject:PRJNA10731 BioSample:SAMEA3138181 KEYWORDS . SOURCE Caenorhabditis briggsae ORGANISM Caenorhabditis briggsae Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 922891) AUTHORS Howe K.L. CONSRTM WormBase Consortium JOURNAL Submitted (03-OCT-2011) to the INSDC. WormBase group, European Bioinformatics Institute, Cambridge, CB10 1SA, UNITED KINGDOM. REFERENCE 2 (bases 1 to 922891) AUTHORS Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R., Waterston R.H. TITLE The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics JOURNAL PLoS Biol. 1(2), E45-E45(2003). PUBMED 14624247 REFERENCE 3 (bases 1 to 922891) AUTHORS Ross J.A., Koboldt D.C., Staisch J.E., Chamberlin H.M., Gupta B.P., Miller R.D., Baird S.E., Haag E.S. TITLE Caenorhabditis briggsae recombinant inbred line genotypes reveal inter-strain incompatibility and the evolution of recombination JOURNAL PloS Genet. 7(7), E1002174-E1002174(2011). COMMENT Details of C.briggsae assembly version CB4: To improve upon the C. briggsae nuclear genome assembly CB3, 167 AF16/HK104 advanced-intercross recombinant inbred lines were successfully genotyped at 1,032 single nucleotide polymorphism (SNP) markers. The resulting data were used to estimate high-density genetic maps. Sequences were assembled by combining the physical and genetic positions of the SNPs to inform the process of ordering and orienting the cb25 supercontigs into chromosome assemblies. 37 of the cb25 fingerprint contigs were split into 100 supercontigs to resolve discrepancies between the physical and genetic orders of SNPs. 638 sequence supercontigs comprise the CB4 assembly. The total nuclear genome content decreased from cb25 to cb4 because of the removal of three supercontigs containing mitochondrial genome sequence (totaling 20.1 kbp). Assembly_name: CB4 Assembly_program: Phusion Seq_technoloy: capillary (whole-genome-shotgun) Seq_coverage: 10x Annotation details: Coding seqences below are the result of integration and manual review of the following data : computer analysis using the programs Genefinder (version 980506; P. Green, unpublished data), FGENESH (Salamov and Solovyev 2000), TWINSCAN (Korf et al. 2001), and the Ensembl annotation pipeline (Clamp et al. 2003); similarity to other proteins from BlastX analyses (http://blast.wustl.edu); sequence conservation with C. elegans using Jim Kent's WABA alignment program (Genome Research 10:1115-1125, 2000); individual C. briggsae GenBank submissions; and personal communications with C. briggsae researchers. tRNAs are predicted using the program tRNAscan-SE (Lowe, T.M. and Eddy, S.R., 1997, Nucl. Acids. Res., 25, 955-964). FEATURES Location/Qualifiers source 1..922891 /organism="Caenorhabditis briggsae" /strain="AF16" /mol_type="genomic DNA" /note="supercontig cb25.fpc0143b" /db_xref="taxon:6238" CDS join(1950..2020,3423..3660) /gene="CBG06038" /locus_tag="CBG_06038" /standard_name="CBG06038" /product="Protein CBG06038" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X118" /protein_id="CAP26328.2" /translation="MSSLLMLGSPFEVPHHSLPYLRFIVLKKSLKSRLLYWYGTLALW KRNVGGRGRKPQIFSYSNHYFFQSLFSRFSLLSVDFFCCFLPNNQKIFQKVFVGQIVD " CDS join(8928..9023,9061..9174,10661..10888,11448..11720) /gene="CBG06039" /locus_tag="CBG_06039" /standard_name="CBG06039" /product="Protein CBG06039" /note="Predicted" /db_xref="GOA:A8X117" /db_xref="UniProtKB/TrEMBL:A8X117" /protein_id="CAP26327.2" /translation="MIWPSPVQMSDLTERDQPEVKKLLDRLVTKFRYEDRINRGSNLS GSTNNSRTGVAAGLAQRFRDDDAAKNVNSPSVALLFSPLLLLFATPPAKPWTSSVAMI SFLHEPEFTYVFILKSLLIGLLNPFWFLIIILSRLYTYLRPFRLKFWPICCLLQFSSF ILSINAWACYFTESYILCEHRIYQWDMEDSPVDGIICQVAVRRNSGDMEDKTNLPIGF QFDDKLDISSLRGYYRFR" assembly_gap 9253..10252 /estimated_length=1000 /gap_type="between scaffolds" CDS complement(join(12265..12421,12472..12595,12642..12903, 13764..13829)) /gene="CBG06040" /locus_tag="CBG_06040" /standard_name="CBG06040" /product="Protein CBG06040" /note="Predicted" /db_xref="GOA:A8X116" /db_xref="UniProtKB/TrEMBL:A8X116" /protein_id="CAP26326.2" /translation="MPDGNELTEKRFRCFCGICHVVTGTQLCLIWYILTSGLSLFFGM RSTCTWLIVPICVVGLGMYAFYSKRHKFLYPFLIITVVQQLVCMLMATIITIFSLCSF DTMRQIIGHTLDMAEAPSKTLALFVVCGTVSACILLSFIHVWQAIIIYTCLEYYEDEY RKLEEGYCVETSRLDATDYDDSRSRCTPDPPYQQREPRFPLV" CDS 14633..14695 /gene="CBG26322" /locus_tag="CBG_26322" /standard_name="CBG26322" /product="Protein CBG26322" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG94" /protein_id="CAR98924.1" /translation="MENGKSWGFSNAEVSFFNRD" assembly_gap 20843..21110 /estimated_length=268 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS 22022..22141 /gene="CBG26320" /locus_tag="CBG_26320" /standard_name="CBG26320" /product="Protein CBG26320" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG93" /protein_id="CAR98923.1" /translation="MKLGREQCRMEKTLIESFSDSGKPTIRKIRSYERTQTNK" CDS complement(join(29472..29813,29915..30082,30135..30207, 30252..30393,30453..30537)) /gene="CBG06043" /locus_tag="CBG_06043" /standard_name="CBG06043" /product="Protein CBG06043" /note="contains similarity to Interpro domain IPR013032 (EGF-like region, conserved site)" /note="Predicted" /db_xref="GOA:A8X115" /db_xref="InterPro:IPR013032" /db_xref="UniProtKB/TrEMBL:A8X115" /protein_id="CAP26325.1" /translation="MIVRSVRIFVTIAFLEMISSSEVKSNNFDPDDCYEPGTNFKENE KNLGYCPCKYGYGGPTCFEIFDCVSGHLRMENCSREIHHEYDLQWRCAATEKEIVKIC TCPEGFRGETCEFILENTLSTYWQTVGQSQKFFEVIYNKSDSCMRIIGTKILRSVLEY RRLIMVVTFIAILGLAWRHTQRQRRRMTHSVNCQSARSRVLNLDNFKNPNFYHLVDSR SLEEADGEIRLPEKKRIEEDSVSRFTEVSEVSEDVDVEISIPKVSRPHLHI" CDS complement(join(31998..32036,32081..32146,32197..32275, 32325..32492,32763..32902,32947..33105,33151..33743, 33790..34033,34081..34195,34247..34462,34515..34648, 34693..34847,35107..35320,35372..35684,35735..35896, 35944..36041,36350..36498,36549..37203,37550..37706, 37761..37850,37895..38038,38085..38286,38340..38467, 39092..39230,39281..39680,39730..39783,39826..39920, 40000..40108,40158..40196)) /gene="Cbr-gtl-1" /locus_tag="CBG_06044" /standard_name="CBG06044" /product="Protein CBR-GTL-1" /note="C. briggsae CBR-GTL-1 protein; contains similarity to Pfam domain PF00520 Ion transport protein contains similarity to Interpro domain IPR005821 (Ion transport)" /note="Predicted" /db_xref="GOA:A8X114" /db_xref="InterPro:IPR041491" /db_xref="UniProtKB/TrEMBL:A8X114" /protein_id="CAP26324.2" /translation="MDRKRGSIVPAIHKAVADSLKANSVTVEENEVERETQRKRRRKK QRSSSADGSAPLNSAPRHVQKFDWKDMLHLADISGRKRGNSTTSHSGHATRAGSLKGK NWIECRLKMRQCSYFVPSQRFSERCGCGKDKSKHSDEVIERSQGKGHPLNHLTLPGIQ EVDTTDADGDGNEVRVYIYILSINRKLNIPSINLRTYTRKKLIQVNLAPGRWSIQTHT EVMPTDSYGNIVFEGTAHHAQYARVSFDTDPRDIVHLMMKVWKLRPPKLIITINGGLT KFDLQPKLARTFRKGIMKIAKSTDAWIITSGLDEGVVRHLDSALHDQGNHHAAKKQHV AIGIASWGMLKQRNRFSGKDSTVTYATNVFNNTRLKELNDNHSYFLFSDNGTVNRYGA EIILRKRLETYLAQGDKKRSAIPLICVVLEGGAFTIKMVHDYVTTIPRIPVIVCDGSG RAADILAFAHQTVSQNGFLSDNIRNQLVNIIRRVFGYDPKTAQKMIKQIVECTTNKSL VCFRNQHLSRDMTIFRFGESSREDLDHAIMSCLLKGQNLSPPEQLQLALAWNRADIAR TEIFANGTEWTTQDLHNAMIEALSNDRIDFVHLLLENGVSMQKFLTYGRLEHLYNTEK GPQNTLRTNLLVDSKHRIKLLEVGRLVEDLMGNLYKSNYTKEEFKNQYFLFNNRKQFG KRVDNSNGGRDDVIGPSGDAGRERMSSMQISLINNARNSIISLFGGGGKRRDSDDEEE FSNLEEEANMDFTFRYPYSDLMIWAVLTKRQKMAKLMWTHGEEGMAKSLVASRLYMSL ARTASLATGEIGMSQDFTEFSDEFSDLAVEVLEYCTKHSRDQTLRLLTCELNNWGDET CLSLAAKNGHRKFLAHPCCQMLLSDLWQGGLLMKNNQNSKVLACLAVPPLIFLLGFKT KEQLMLQPKTAAEHDEEMSDSEMNSAEETETSSDSDSDSDESDEDGAKNRAQSLGADQ PLSIQRLVRDKLNFSEKKKNDMGINRIVVAPPIAGRSRARTMSIKKSKKNVIKPPACL TIEPSDDDDEQEQKKATEMYINRTGKRGSVAIAVNHDDMYMDPSEEMETDPRQKSSRE FSSSRNETVHVLMQRPLSWKKKIMEFYKAPITTYWLWFFAFVLFLILLTYNLLVKTQR IASWSEWYVFAYIFVWTLEIGRKVVSTIMMDTSKPVLKQLRVFFFQYRNGLLAFGLIT YLIAYFIRLSPTTKTLGRILIICNSVIWSLKLVDYLSVLQGLGPYINIVAEMIPSMIP LCVLVFITLYSFGLLRQSITYPYEDWHWILVRNIFLQPYFMLYGEVYAAEIDTCGDEI WHTHEDENIPISMLNVTHETCVPGYWIAPVGLTVFMLATNVLLMNVMVAGCTYIFEKH IESTREIFLFERYGQVMEYESTPWLPPPFTIIYHIIWVFKLIKYSSRMFERKNLFDQS LSELKNNSNSKVKTEKYSELFLSPDEMEKVHTFEEESVEDMKRETEKKNLSSNDERIH RTAERTDAILHRVAHLTQMEFSLKEELRELEHKMKNMDSRHKEQMNLMLEMNKKLSKF VTGKYKRGSFGGSGSDTGGGGSTEHITVEKKNSLPMITVDGPTPISSRRSSGQYLKRD SLQMKKRSIEAKIPSIQVEASDGLSLFIEHEDDEAESAVEYVEYSIPVPQFRVRHVTE SDKSDLSEDDLVSREVEPPTNLNMSRGPRRHALYSTIADAIETEDYYYADSPVPMPMT PIQPDDGSYFGETDPKFPGAESDYE" CDS join(41724..41746,41799..41979,42031..42293,42337..42546, 42596..42788) /gene="CBG06045" /locus_tag="CBG_06045" /standard_name="CBG06045" /product="Protein CBG06045" /note="contains similarity to Interpro domain IPR004087 (K Homology)" /note="Predicted" /db_xref="GOA:A8X113" /db_xref="InterPro:IPR004087" /db_xref="InterPro:IPR036612" /db_xref="UniProtKB/TrEMBL:A8X113" /protein_id="CAP26323.1" /translation="MLSNPTSLYLDELLNEMSQLSESSMDFKNTRILLSREISRVFEE MTRNDTGSKQKRYGSEDRRTEFFSPQIVHPSPSVQSPYTPYSSFQSLYTPSVLKSSNP FVTPMKHGRINSPEQFLGDWTRGNASLNGSESPYVLQTKIYIPEAPARENAQKPRYNY VGRILGPSGSSARQIESQYDVTLLIRGAGSMKDARTEAELKGRKKYEHLNERLHVLLI ARNNDKQKCEQILDKAAEKIESLLVPVHDDYKKDQLVRYAIMNGTYEMRSDKKMESAG RGRRSVQYNQTHN" CDS join(43017..43028,43078..43710) /gene="CBG06046" /locus_tag="CBG_06046" /standard_name="CBG06046" /product="Protein CBG06046" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X112" /protein_id="CAP26322.2" /translation="MQKGKRQEEGTIQCEPTKPTCPPGPPGPPGQPGAPGQPGAPGPR GEDNTATYAPIHCPPPVLDCIQCPQGPAGPAGPTGPPGPAGPSGQPGFPGQRGNDGFP GAPGAPGDNGQPGAPGQDGFPGQPGADGQRGAGTPGAQGAPGNAGPAGPAGQPGFPGQ DGAPEQAGPAGQDGYPGNNGSDGQPGSPGGPGLPGNDAAYCTCPPRSAVFLSRH" CDS join(44182..44334,44382..44540) /gene="CBG06047" /locus_tag="CBG_06047" /standard_name="CBG06047" /product="Protein CBG06047" /note="Predicted" /db_xref="GOA:A8X111" /db_xref="UniProtKB/TrEMBL:A8X111" /protein_id="CAP26321.2" /translation="MVFFYTFYVFQRSLRGETILIPKLPLRIHWKSITLITIFFFSTG YFIFPYTTNLLMYQHFYVYCLCIETSIWYFTKEFRMFPRHPRSNYFLFLRAYNLTAHR I" CDS complement(join(45829..46073,46120..46336)) /gene="CBG26319" /locus_tag="CBG_26319" /standard_name="CBG26319" /product="Protein CBG26319" /note="Predicted" /db_xref="GOA:B6IG92" /db_xref="UniProtKB/TrEMBL:B6IG92" /protein_id="CAR98922.1" /translation="MQDLENEQRKLQSHVNGQQVKTPYWTLVLESSPSTVMIPKLHHF VSMPFIINVFGLAFYGVGLNSMGAGIGLTFGAINIGRGYGWRITAIVGILSFLLGPLL TYAFDLLSPSYNRFPYKAASVIAIQSLLYFLSKNFPLVFEGMKERLLNRWN" CDS complement(join(50014..50172,50220..50393,50504..50725)) /gene="CBG06050" /locus_tag="CBG_06050" /standard_name="CBG06050" /product="Protein CBG06050" /note="Predicted" /db_xref="GOA:A8X110" /db_xref="UniProtKB/TrEMBL:A8X110" /protein_id="CAP26320.1" /translation="MYLIYLGTYSIEWPSNNPSLNGFPWEFFAVYLNVPFLFDESFED IHTTMLLLFGLIQSAFLCNLFTFIQFNFGWGIRYARAMVFFYTFYVFQRSLRGETILI PKLPLRIHWKSITLITIFFFSTGYFIFPYTTNLLMYQRFYVYCLCIETSIWYFTKEFR MFPRHPRPNYFLFVRAYNLTVRRI" CDS complement(join(50999..51772,51817..51927)) /gene="Cbr-col-127" /locus_tag="CBG_06051" /standard_name="CBG06051" /product="Protein CBR-COL-127" /note="C. briggsae CBR-COL-127 protein; contains similarity to Pfam domain PF01484 Nematode cuticle collagen N-terminal domain contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal)" /note="Predicted" /db_xref="GOA:A8X109" /db_xref="InterPro:IPR002486" /db_xref="UniProtKB/TrEMBL:A8X109" /protein_id="CAP26319.2" /translation="MEKILVTISTGAASIAVLAVLFTVPSLYNTINEVHDQVLDGVSV FRVETDSAWTEMMDIQVTVTPPTKPRVNPFNSVFRQKRQTFSGLPAWCQCEPTKPTCP PGPPGPPGQPGAPGQPGAPGPRGEDNTATYAPIHCPPPALDCIQCPQGPAGPAGPTGP AGPAGPSGQPGFPGQRGNDGFPGAPGAPGDNGQPGAPGQDGFPGQPGADGQRGTGTPG AQGAPGNAGPAGPAGQPGFPGQDGAPGQAGPAGQDGYPGNNGSDGQPGSPGGPGLPGN DAAYCACPPRSAVFLSRH" CDS complement(join(52329..52901,52944..53104,53148..53260, 53321..53439,53483..53895,53945..54010,54058..54172, 54225..54278)) /gene="Cbr-nhr-7" /locus_tag="CBG_06052" /standard_name="CBG06052" /product="Protein CBR-NHR-7" /note="C. briggsae CBR-NHR-7 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /note="Predicted" /db_xref="GOA:A8X108" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR013088" /db_xref="InterPro:IPR035500" /db_xref="UniProtKB/TrEMBL:A8X108" /protein_id="CAP26318.1" /translation="MQSYTNRVCAVCGDTPAKIHYGVLACFGCKGFFRRAVKDGRNKY VCRFEKNCEVTKFERNACRYCRFRKCLLVGMNPDYVRPDREKSKKGKTLLSKKKSLSR SMSNRMAIDPSDWTSLLSPSSRKQLTEITKLSEICTTSTNFDGIGNFSLKSLIADRSL ARKTGDSEAMDCSTSPRQSSDQFISIERIVQNVDFIDRFLNMLEDEHCRKFSVEDKSA LISDTLIHLLFFESISRFVVKGTPGLEDLKTSLLQLPLCTSHLTQKLSDVFEIFLRKP PSIIEYSVLKAYIVTTAESTMISNSLNESLTLARENLSELLFKVIKHSRNKTSISSAN SLSAILHFIFESKNLSTSLRQSQQPFYTRDSDLKIPFHKILTDIINPEVSDLLMTTAA CRKQSNQQMGPPLSSVPPVQPLETVSLFHFSPPSLSPHPVAPPPQPQPLYPEYSMQST SSYPTTSSPFQSPYRPNSLASFPKLPLQMTKSIEDYLRPTGMTADDMNRPLEKNWADG LRLTPMFNKEIVSQFFPELSHTNHHHQPF" CDS join(58604..58704,58747..58836,59065..59526,59573..59905, 59954..60097,60144..60233,60281..60497,60546..60668, 60720..60806,60851..61072,61083..61300,61348..61428, 61475..61636,61680..62484,62535..62893,62937..63008, 63054..63132,63183..63234,63972..64095,64141..64198, 64242..64322,64368..64438,64487..64601,64645..64733, 64781..64877) /gene="Cbr-gtl-2" /locus_tag="CBG_06053" /standard_name="CBG06053" /product="Protein CBR-GTL-2" /note="C. briggsae CBR-GTL-2 protein; contains similarity to Pfam domain PF00520 Ion transport protein contains similarity to Interpro domain IPR005821 (Ion transport)" /note="Predicted" /db_xref="GOA:A8X107" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR041491" /db_xref="UniProtKB/TrEMBL:A8X107" /protein_id="CAP26317.2" /translation="MINETTMKTNGINGETIGENDGEEEEEEEGNEDRNRSSSFLRLL NAPRNSVCNANTVHSISSFRSDHLSRKSTHKLLENPNLFAIELTEKLSPPWIENTFEK RECVRFTAQSKDAERCGCGRPLAAHSSASRLFYTLPYQIIDKEQEVWTIANNTQTSTT DAFGTIVFQGGAHAHKAQYVRLSYDSEPLDVMYLMEKVWGLEAPRLVITVHGGMSNFE LQERLGRLFRKGMLKAAQTTGAWIITSGLDSGVVRHVAKALDEAGISARMRSQIVTIG IAPWGVIKRKERLIRKNEHVYYDVHSLSVNANVGILNDRHSYFLLADNGTVGRFGADL HLRQNLENHIATYGCNGRKVPVVCTLLEGGISSINAIHDYVTMKPDIPAIVCDGSGRA ADLISFAARYINTDGTFAAEVGEKLKNLIKMVFPESDQEGMLSKITECVIRDDLLRIF RYGEEEEEDVDFVILSTVLQKQNLPPDEQLALTLSWNRVDLAKSCLFSNGRKWPSDVL EKAMNDALYWDRVDFVECLLENGVSMKNFLTINRLENLYNMDDVNSAHSVRNWMENFD SMDPHTYLTIPMIGQVVEKLMGNAFQLYYTSRSFKGKYDRYKRLNQVFPFLEYPSIFS SYFYRKRKIVQKELFKKKSDDQIDESSEEDFSFSYPFNDLLIWAVLTSRHEMAKCMWI HGEDAMAKCLVAIRLYKATAKIAEDEYLDVEEAKRLFDNAVKCREDAIELVDQCYRAD HDRTLRLLRMELPHWGNNNCLSLAVLANTKTFLAHPCCQILLAELWHGSLKVRSGSNV RVLTALICPPAILFMAYKPKHAKTARLLSEETQEDIPYPRESITSTTSNRYRYPKGPE EQKETLLEKGNYAKKVTIISSRKNSGVASVYGSASSMMFKRDPQLSKFEKFRAFYSAP ITKFWSWCIAFLIFLITQTCILLLETSLKPSKYEWILLVYTVTLSVEHMRKVRAFRSE QRKSSIEYIQLLTSEGSRINEKIKVFYAKWYNIWTSAALLFFLFGYGFRLVPMFRHSW GRVLLSISNVLFYMKTFEYLSVHPLLGPYIQMAAKMVWSMCYIVVLLLVPLMAFGVNR QALTEPKIKDWNWLLVRNIFYKPYFMLYGEVYAGEIDTCGDEGTRCFPGYFIPPLLMV VFLLVANILLLNLLIAIFNNIYNDSIEKSKEIWLFQRYQQLMEYHDSPFLPPPFSIFA HVYHFIDYIWNLRSKRPDTKRFRSEHSIKWSVTEDEMKRMQDFEEDCIDTLTRTRRLK LDTKEPLNMTDLTELTCERVHDLMQENFLLKSRVYDIETKIDHIANSSDEVVLILKNK KMSQNFAASCLSLPETSIEVPKLTKPLIDYHLSPVVIEERLATRSPLLANLHRDHTLR KYDDANFQAGNLQRRTRLHSSSCSISQDMKEMRTSASSRNLKRQDSEELTVSSHGGYD SDISGPD" CDS join(69409..69699,69750..70262,70576..70725,70876..71059, 71109..71593,71641..71879,71933..72789,72836..73042, 73093..73449,73497..73680,73730..73815,73862..74068, 74121..74634,75126..75180) /gene="CBG06054" /locus_tag="CBG_06054" /standard_name="CBG06054" /product="Protein CBG06054" /note="contains similarity to Pfam domain PF03782 AMOP domain contains similarity to Interpro domains IPR005533 (AMOP), IPR003886 (Nidogen, extracellular domain)" /note="Predicted" /db_xref="GOA:A8X106" /db_xref="InterPro:IPR003886" /db_xref="InterPro:IPR005533" /db_xref="UniProtKB/TrEMBL:A8X106" /protein_id="CAP26316.2" /translation="MTSSVRLAFLVTLLLLLPLEAQIQQANSANINQNIGQQDAGTLF TGTGTNLYYGVNLVPFGPDAGDQEVNPGLLTAGQTIDLHMYFPFYGGLYNYSTLSVNG YIGFATVLDQGPTLNVGPDMTDWPRHEDPAMIAPYLCKQQVPQSLNPGMRSGVYYRLV MRQSLFGRQSGSNMNMGQATYQSSFFGQSASQACPGTPDSYVRCDTQADYFLEDMQRW LIEGVAGAAAFRADAALVVTWYNTASAISGRSDIDSGQLATYQAIWLTDRRGVLDESK SKKNHIFWNFQTARLSYVILNYDRLGFDAADFRQNSRSGRCQALFNGGNHTGLVPVDP TQDFKNTPKVLAQRSGVPQMVRGRYMFRVDDVVRPAGCSNKTGGTYPMLIYPNIVNML GEMTVDVNAICLDKAQTYILMIEQRQTATCTVLTSAIARCNLPKIYDWGTKTVYFQPQ SGGANDEKAFVGYIYFVPPTLDPMRLDIGNVYDWFKNPLPYQTMPLVWYPRNFTNPDV SLHMDQVRMNDDSLYSVQLGLYVIAYREHKDDTIKKFRPEHRVICRLATYSNRNTYEY RWKPQEERINLFQVEQWYMTDWERQNELYQYRFGYLKLAPLKPNQEQNPQLLLSGLVS SPISLHFLWTSNNPQFSTTTYSANDEAARTEYVKKKSLEMCHDWYDEDGAQWNFIRDI ETNSSCPCIERQAIADIGRFMPHPRCSQAFRDITCTTSIGSRNCYMSSQNVMTTFAGD GRSYTSENTARFPTHYGQVCCYDDSGHLMQTSYQPVIKVTPDVPYNPGFPMRAYEFGT APYMGQYEVPGLSAFHNDYMPYFLCCKFADFRCQMFYWRRPSSGCQEYQPPAWGEVMG AGTFNTIDNDKFIFNEPGVYNGIYIPKTVATPEVKIQIRMERYPNRRVDFSLLGRYMA QQDLVQPTNATVVTGVVLEATGTDRVHVLARKDTRRFRYRTSIIVGNILRYFDTMRIQ RFKGVMVYVNNVERGQPEIYVVLEEAQIGIRVRESYAIDIDRLSEYQESMGMLNVAVS VAPQYGVRPDGDKTREQELRQRYNLPRVSGVFRPFPDQASNSYMNTLTLQDVNSEQYR QQIIQMYRVQGSGEQGSDQNINNQGNNYGMPTENMFTTSRDEDKKFEVFPEAQMKSGP IYKTSPKYETGAYRFYPVTGQVMNQRLQTCRDMQQSNTINLQPLQSQLTADYGHTQCP DNPAAVIQDCGDSVPCLYDYSMFNAKILGLNVKNEWNTFTSDRFDASRQYNSCGVINI EYPEYLMKTSSLSSAYMQGDVARFECFQSHWIKGVHEYKCGIVVDRNRPNLNEYRFEW NKGEQPWCRPREMENFLIWLSIIAGILGVIVFVILIFLCCWIVKQKKLNEANENRRQN GMDMASRSSMTGSRGGKKYPINESEPLNEKRFDADTYRDDDFYPPAREGQYARAEDLH GLKTSV" CDS complement(76044..76454) /gene="CBG06055" /locus_tag="CBG_06055" /standard_name="CBG06055" /product="Protein CBG06055" /note="contains similarity to Pfam domain PF00125 Core histone H2A/H2B/H3/H4 contains similarity to Interpro domains IPR000164 (Histone H3), IPR007125 (Histone core)" /note="Predicted" /db_xref="GOA:G2J6F9" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="UniProtKB/TrEMBL:G2J6F9" /protein_id="CAP26315.1" /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPAAGGVKKPHRYRP GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQESAEAYLV GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" assembly_gap 76574..76809 /estimated_length=236 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS 76846..77157 /gene="CBG06056" /locus_tag="CBG_06056" /standard_name="CBG06056" /product="Protein CBG06056" /note="contains similarity to Pfam domains PF02969 (TATA box binding protein associated factor (TAF)) , PF00808 (Histone-like transcription factor (CBF/NF-Y) and archaeal histone) , PF00125 (Core histone H2A/H2B/H3/H4) contains similarity to Interpro domains IPR019809 (Histone H4, conserved site), IPR004823 (TATA box binding protein associated factor (TAF)), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone), IPR001951 (Histone H4)" /note="Predicted" /db_xref="GOA:G2J6C3" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR009072" /db_xref="InterPro:IPR019809" /db_xref="InterPro:IPR035425" /db_xref="UniProtKB/TrEMBL:G2J6C3" /protein_id="CAP26314.1" /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGV KRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFG G" assembly_gap 77769..83991 /estimated_length=6223 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(84001..84144,84192..84430,84484..85340,85387..85593, 85644..86000,86048..86231,86281..86314,86346..86619, 86672..87185,87677..87731) /gene="CBG06057" /locus_tag="CBG_06057" /standard_name="CBG06057" /product="Protein CBG06057" /note="contains similarity to Pfam domain PF03782 AMOP domain contains similarity to Interpro domain IPR005533 (AMOP)" /note="Predicted" /db_xref="GOA:A8X103" /db_xref="InterPro:IPR005533" /db_xref="UniProtKB/TrEMBL:A8X103" /protein_id="CAP26313.2" /translation="MPLVWYPRNFTNPDVSLHMDQVRMNDDSLYSVQLGLYVIAYREH KDDTIKKFRPEHRVICRLATYSNRNTYEYRWKPQEERINLFQVEQWYMTDWERQNELY QYRFGYLKLAPLKPNQEQNPQLLLSGLVSSPISLHFLWTSNNPQFSTTTYSANDEAAR TEYVKKKSLEMCHDWYDEDGAQWNFIRDIETNSSCPCIERQAIADIGRFMPHPRCSQA FRDITCTTSIGSRNCYMSSQNVMTTFAGDGRSYTSENTARFPTHYGQVCCYDDSGHLM QTSYQPVIKVTPDVPYNPGFPMRAYEFGTAPYMGQYEVPGLSAFHNDYMPYFLCCKFA DFRCQMFYWRRPSSGCQEYQPPAWGEVMGAGTFNTIDNDKFIFNEPGVYNGIYIPKTV ATPEVKIQIRMERYPNRRVDFSLLGRYMAQQDLVQPTNATVVTGVVLEATGTDRVHVL ARKDTRRFRYRTSIIVGNILRYFDTMRIQRFKGVMVYVNNVERGQPEIYVVLEEAQIG IRVRESYAIDIDRLSEYQESMGMLNVAVSVAPQYGVRPDGDKTREQELRQRYNLPRVS GVFRPFPDQASNSYMNTLTLQDVNSEQYRQQIIQMYRVQGSGEQGSDQNINNQGNNYG MPTENMFTTSRDEDKKFEVFPEAQMKSGPIYKTSPKYETGAYRFYPVTGQICNNPIQV IINFIFRNSFFKFSVNLQPLQSQLTADYGHTQCPDNPAAVIQDCGDSVPCLYDYSMFN AKILGLNVKNEWNTFTSDRFDASRQYNSCGVINIEYPEYLMKTSSLSSAYMQGDVARF ECFQSHWIKGVHEYKCGIVVDRNRPNLNEYRFEWNKGEQPWCRPREMENFLIWLSIIA GILGVIVFVILIFLCCWIVKQKKLNEANENRRQNGMDMASRSSMTGSRGGKKYPINES EPLNEKRFDADTYRDDDFYPPAREGQYARAEDLHGLKTSV" CDS complement(88595..89005) /gene="CBG06058" /locus_tag="CBG_06058" /standard_name="CBG06058" /product="Protein CBG06058" /note="contains similarity to Pfam domain PF00125 Core histone H2A/H2B/H3/H4 contains similarity to Interpro domains IPR000164 (Histone H3), IPR007125 (Histone core)" /note="Predicted" /db_xref="GOA:G2J6F9" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="UniProtKB/TrEMBL:G2J6F9" /protein_id="CAP26312.1" /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPAAGGVKKPHRYRP GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQESAEAYLV GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" CDS 89243..89554 /gene="CBG06059" /locus_tag="CBG_06059" /standard_name="CBG06059" /product="Protein CBG06059" /note="contains similarity to Pfam domains PF02969 (TATA box binding protein associated factor (TAF)) , PF00808 (Histone-like transcription factor (CBF/NF-Y) and archaeal histone) , PF00125 (Core histone H2A/H2B/H3/H4) contains similarity to Interpro domains IPR019809 (Histone H4, conserved site), IPR004823 (TATA box binding protein associated factor (TAF)), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone), IPR001951 (Histone H4)" /note="Predicted" /db_xref="GOA:G2J6C3" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR009072" /db_xref="InterPro:IPR019809" /db_xref="InterPro:IPR035425" /db_xref="UniProtKB/TrEMBL:G2J6C3" /protein_id="CAP26311.1" /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGV KRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFG G" CDS complement(91850..92218) /gene="CBG06060" /locus_tag="CBG_06060" /standard_name="CBG06060" /product="Protein CBG06060" /note="contains similarity to Pfam domains PF00808 (Histone-like transcription factor (CBF/NF-Y) and archaeal histone) , PF00125 (Core histone H2A/H2B/H3/H4) contains similarity to Interpro domains IPR000558 (Histone H2B), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /note="Predicted" /db_xref="GOA:G2J6I6" /db_xref="InterPro:IPR000558" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="UniProtKB/TrEMBL:G2J6I6" /protein_id="CAP26310.1" /translation="MPPKPSAKGAKKAAKTVTKPKDGKKRRAHRKESYSVYIYRVLKQ VHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGE LAKHAVSEGTKAVTKYTSSK" CDS 92477..92860 /gene="CBG06061" /locus_tag="CBG_06061" /standard_name="CBG06061" /product="Protein CBG06061" /note="contains similarity to Pfam domains PF00808 (Histone-like transcription factor (CBF/NF-Y) and archaeal histone) , PF00125 (Core histone H2A/H2B/H3/H4) contains similarity to Interpro domains IPR007125 (Histone core), IPR002119 (Histone H2A), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /note="Predicted" /db_xref="GOA:G2J745" /db_xref="InterPro:IPR002119" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="InterPro:IPR032454" /db_xref="InterPro:IPR032458" /db_xref="UniProtKB/TrEMBL:G2J745" /protein_id="CAP26309.1" /translation="MSGRGKGGKAKTGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQR VGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGV TIAQGGVLPNIQAVLLPKKTGGDKE" CDS complement(join(93079..93372,93418..93651,93697..93869, 93918..94102,94151..94446)) /gene="CBG06062" /locus_tag="CBG_06062" /standard_name="CBG06062" /product="Protein CBG06062" /note="contains similarity to Pfam domain PF03054 tRNA methyl transferase contains similarity to Interpro domain IPR004506 (tRNA-specific 2-thiouridylase)" /note="Predicted" /db_xref="GOA:A8X0Z8" /db_xref="InterPro:IPR004506" /db_xref="InterPro:IPR014729" /db_xref="InterPro:IPR023382" /db_xref="UniProtKB/TrEMBL:A8X0Z8" /protein_id="CAP26308.2" /translation="MKVPRVVIGMSGGVDSAVSAFLLKQKGFDVVGLHMVTHSRQRES EKKNISQINWDSQEEGSSTCPRSKDEADARNVCNRLNIPFHTVNFVKEYWNHVFLKFL ENYKIGRTTVPDIDCNYSIKFDAFHKVAQETFDADFIATGHYATTSFGDFQQNRKHSE AIRLFSGRDPLKDQTFFLCTVTQEQLKRAMFPLGSLQKSEVKRIAEQQGFHRVVKKPE SMGICFIGKKKRFSDFLDEYIEPKPGRIVLKDGKQIGKHHGIHQFTIGKRIHGKYLNE RSHFGFFVSEIRSDTGDVVACNGSHHSDLYATRFLINRPNWIPSSDPLEEISPSKILC RIQRTHPPVPCKVEKSEHYLSVEPKIPLRATSPGQMCVFYTTENECLGGGEIFKIEKT L" CDS complement(join(94918..95076,95108..95432,95479..95655, 95702..95772,95811..95996)) /gene="CBG06063" /locus_tag="CBG_06063" /standard_name="CBG06063" /product="Protein CBG06063" /note="Predicted" /db_xref="GOA:A8X0Z7" /db_xref="InterPro:IPR009622" /db_xref="UniProtKB/TrEMBL:A8X0Z7" /protein_id="CAP26307.2" /translation="MKRLWNKIGSGVKNANHLKMSIEEVAKIEKGETKVGICSLQKQN NFFRSFRQNTLRRRFAKSHLVENMNKMNITSTDPVERWTSTKDLPTRESEFLHRNDPM WEYGFYEPPVERIPKDKLMFREALEYLRCRQELLSETSSEPQRKQAAQLMSDHVVTAR VNSETLDDIYEYFRPFERKDKQKVTSSTKVLKKLFELQVVNRHALAELQDHLQGHSDE RKILDEAQDVGKKLRQISDNAKFLDEYQRVSSYEKLEDQEKEKVREAIAQLRQEEHER LNKRLGQIGEMEKSAQEAMKKAVEEKKHK" CDS join(96723..96788,96835..96907,97391..97780,97833..97991, 98087..98318,98436..98599,98648..98760) /gene="Cbr-dnj-1" /locus_tag="CBG_06064" /standard_name="CBG06064" /product="Protein CBR-DNJ-1" /note="C. briggsae CBR-DNJ-1 protein; contains similarity to Pfam domains PF00226 (DnaJ domain) , PF09320 (Domain of unknown function (DUF1977)) contains similarity to Interpro domains IPR015399 (Domain of unknown function DUF1977, DnaJ-like), IPR003095 (Heat shock protein DnaJ), IPR001623 (Heat shock protein DnaJ, N-terminal), IPR018253 (Heat shock protein DnaJ, conserved site)" /note="Predicted" /db_xref="GOA:A8X0Z6" /db_xref="InterPro:IPR001623" /db_xref="InterPro:IPR015399" /db_xref="InterPro:IPR018253" /db_xref="InterPro:IPR036869" /db_xref="UniProtKB/TrEMBL:A8X0Z6" /protein_id="CAP26306.1" /translation="MTADANRSESLLCMDKAREAIKSGDTDKARRMLLKAKKLDPGQN IEFLTKKIDEMTTSSSQSSSSRASEERSYAHDDHYDEPNLRNRKARSPVKKNGKTEPE PKPRSASRTPKLGVDYTSEQKELVERIRHCKDYYEILKVDKQASDDDIRKEYRKMALK LHPDKCRAPHATEAFKALGNAYAVLSDADKRRQYDQFGAEAANGHTPTTRRRGGGGGV FFEHDYAHGFEADFTPEEIFNMFFGGGFPTEQVRRRARHAQQQQYHRYEQQQTPYGPL LQLLPLIAIMVIGLLAQIMVGEPAFSLHQTSKYTVKRMTAELRVPYFVRSDFESSYRG RIRQVEQQVEDDYIQNLRMNCYKEQNLKETKLYRARWMRDEAMMRDAERTPLPSCIRL NEIYSH" CDS complement(join(99200..99367,99412..99844,99897..100000, 102683..102907,103374..103457,104011..104013)) /gene="CBG06065" /locus_tag="CBG_06065" /standard_name="CBG06065" /product="Protein CBG06065" /note="contains similarity to Pfam domain PF01764 Lipase (class 3) contains similarity to Interpro domain IPR002921 (Lipase, class 3)" /note="Predicted" /db_xref="GOA:A8X0Z5" /db_xref="InterPro:IPR002921" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8X0Z5" /protein_id="CAP26305.2" /translation="METFNLLQLRRQLNVKCDSVKKDICSAYTKFKPKQSEVQKFYPR VDTTWPDLDPMTCSTDLPPPPLFRSLVDPEIQRQSVPTSNTRTTTASSIHLSSDACLP STLRRQLNVVCDAVKKDICSAYTAVLNDNKAIVISFRGTQGFLQLIEEADKSVFQSQS PWVAGGKVSKYFGDAFNTLWNAGMKDDVSSLLHKNPTFEVWVTGHSLGGAMASLAASY IVKNGIATGDKVKLVTYGQPRTGTTPFAVAHDAQMAYSYRVTHNRDIVPHIPNEGMED YKHHKSEVFYKESMNPGASYKVCSSADESNDCSNGLLITASVSDHLTYFTKDVSQWGE AGCN" assembly_gap 108229..108238 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(109662..109702,109756..109882,109930..110158, 110275..110589,110671..110795,110844..111005) /gene="CBG06068" /locus_tag="CBG_06068" /standard_name="CBG06068" /product="Protein CBG06068" /note="contains similarity to Interpro domain IPR007087 (Zinc finger, C2H2)" /note="Predicted" /db_xref="GOA:A8X0Z4" /db_xref="InterPro:IPR003656" /db_xref="InterPro:IPR013087" /db_xref="UniProtKB/TrEMBL:A8X0Z4" /protein_id="CAP26304.2" /translation="MGRKKKKIDKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKL FSGPGLSIHCMQVHKETIDKIPAAVHGRDNIHVEIYGMQGIPAGAYRGAADDEPDEKR SKMDSGQPPMPAPMPFPQHFPYPGMPPMPSGPPPPQMGYGMPPMPPHGMMPPPGMPGA YPPPRPYQPPPGAPGVYMPPPGMPGAYPPPRMPMGGPPGGPPMPGAPPPRSRFDQPDG DRWGAPPRGPRTPQYEDDRDNQDYRAPDEYHQGGYEDRFREGDRGNLPGGSRFEAVKS EPEPVTSATSAKVAAVAAVASKLGSRTRIVHPDDHSLSLEERRVKMLFEKRANSYH" CDS complement(join(111337..111519,111562..111760, 111808..111902,111947..112145,112188..112303, 112350..112447,112497..112611)) /gene="Cbr-dnj-2" /locus_tag="CBG_06069" /standard_name="CBG06069" /product="Protein CBR-DNJ-2" /note="C. briggsae CBR-DNJ-2 protein; contains similarity to Pfam domain PF00226 DnaJ domain contains similarity to Interpro domains IPR003095 (Heat shock protein DnaJ), IPR001623 (Heat shock protein DnaJ, N-terminal), IPR018253 (Heat shock protein DnaJ, conserved site)" /note="Predicted" /db_xref="GOA:A8X0Z3" /db_xref="InterPro:IPR001623" /db_xref="InterPro:IPR018253" /db_xref="InterPro:IPR036869" /db_xref="UniProtKB/TrEMBL:A8X0Z3" /protein_id="CAP26303.1" /translation="MNSALSLPFLVICLVLVQQCDSVGFAPELYCGLENCYDVIEINR EEFDKQKLSKAYRALARKHHPDRVKNKEEKILAEERFRVIATAYETLKDEEAKTTYDY YLDHPDQRFYNYYQYYRLRVAPKVDVRLVIVGTILVISLFQYLSAKHKFSEAIEYATG VGKFRNMAIKDGVDRGLLEMDRNGKLKKNKGDNDAIIKQIITENLDVTGGYKKESVYD TLAWHTIISPLTIFRYIKWAVLWYWRFAIKKEELDDEAKMYLIRKYLGVSQSEFDQRF GTDIDDLFEHECWIKANCEKWKAEKDAAEQEKMAQSGRYKRYKRYMKNAGTISFVDEE " CDS complement(join(112859..113053,113097..113218, 113264..113503,113562..113604)) /gene="CBG06070" /locus_tag="CBG_06070" /standard_name="CBG06070" /product="Protein CBG06070" /note="contains similarity to Pfam domain PF01661 Macro domain contains similarity to Interpro domain IPR002589 (Appr-1-p processing)" /note="Predicted" /db_xref="InterPro:IPR002589" /db_xref="UniProtKB/TrEMBL:A8X0Z2" /protein_id="CAP26302.1" /translation="MPATLAEIPTLFHKFRVAKRVLDRVSIWDGDITNLTVDAIVNAA NSRLAGGGGVDGAIHRAAGRNELQAECRKYNGCAVGDAVITSGCNVNHIKKIIHTVGP QVYGSVTDEKRENLIACYRTSLDIAIENGMKSVAFCCISTGVYGYPNDDAAKTVTKFL TEFLENDDQIERIVLVTFLQVDNELYNEYFAKYAATKTV" CDS join(113866..113952,113997..114128,114265..114426) /gene="Cbr-pfd-4" /locus_tag="CBG_06071" /standard_name="CBG06071" /product="Protein CBR-PFD-4" /note="C. briggsae CBR-PFD-4 protein; contains similarity to Pfam domain PF01920 Prefoldin subunit contains similarity to Interpro domains IPR002777 (Prefoldin beta-like), IPR016661 (Prefoldin, subunit 4)" /note="Predicted" /db_xref="GOA:A8X0Z1" /db_xref="InterPro:IPR002777" /db_xref="InterPro:IPR016661" /db_xref="UniProtKB/Swiss-Prot:A8X0Z1" /protein_id="CAP26301.1" /translation="MATQAKVSAEDQALLNKFARSYQLQTQLKAECKEMKTLVENINE ATDEVLLLDDEDSASIPCRIGSCFVHFNSDSLNEHLEAKKASTETVLAEKTNELETIT AEMERIKKVLYGKFGDQINLDAEE" CDS join(116374..116712,116756..116831,116883..117135, 117182..117483,117530..117667,117709..117910, 117959..118223) /gene="Cbr-gspd-1" /locus_tag="CBG_06072" /standard_name="CBG06072" /product="Protein CBR-GSPD-1" /note="C. briggsae CBR-GSPD-1 protein; contains similarity to Pfam domains PF02781 (Glucose-6-phosphate dehydrogenase, C-terminal domain) , PF00479 (Glucose-6-phosphate dehydrogenase, NAD binding domain) contains similarity to Interpro domains IPR022675 (Glucose-6-phosphate dehydrogenase, C-terminal), IPR019796 (Glucose-6-phosphate dehydrogenase, active site), IPR001282 (Glucose-6-phosphate dehydrogenase), IPR022674 (Glucose-6-phosphate dehydrogenase, NAD-binding)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X0Z0" /db_xref="InterPro:IPR001282" /db_xref="InterPro:IPR019796" /db_xref="InterPro:IPR022674" /db_xref="InterPro:IPR022675" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8X0Z0" /protein_id="CAP26300.1" /translation="MANQCKRHSVSDPLSKDLVECLRESMQRELKFETPYVFVVFGAS GDLAKKKIYPTLWWLFRDNLLPVNIKFVGYARSDLTVCKLRESFEKFCKVRETEKCAF DDFIKKCSYIQGQYDTSDGFQRLQSSIDDFQKESHDQAVNRLYYLALPPAVFNVVSTE LKKNCMDRGDSWTRVIIEKPFGHDLKSSCELSTHLAQLFKEDQIYRIDHYLGKEMVQN LMVMRFGNRILAPSWNRDHIASVMISFKEDFGTGGRAGYFDTAGIIRDVMQNHLMQIL TLVAMEKPASLNAEDIRDEKVKVLKACKVVELKDVVVGQYVANPDFDHPEASQGYKDD KSVPADSTTPTYALAVLHINNERWEGVPFFLRCGKALNEKKAEVRIQFKEVSGDIYPS GELKRSELVMRVQPNEAVYMKLMTKKPGMGFGVEETELDLTYNNRFKDVRLPDAYERL FLEVFMGSQINFVRTDELEYAWRILTPVLEELEKKKIQPVQYKFGSRGPTEGDDLMQK YGFIFTGTYKWVAPKL" CDS join(118719..118824,118875..118963,119010..119098, 119143..119299) /gene="CBG06073" /locus_tag="CBG_06073" /standard_name="CBG06073" /product="Protein CBG06073" /note="contains similarity to Pfam domain PF00075 RNase H contains similarity to Interpro domain IPR002156 (Ribonuclease H domain)" /note="Predicted" /db_xref="GOA:A8X0Y9" /db_xref="InterPro:IPR002156" /db_xref="InterPro:IPR012337" /db_xref="InterPro:IPR036397" /db_xref="UniProtKB/TrEMBL:A8X0Y9" /protein_id="CAP26299.1" /translation="MAGRGQPNPHVYTDGSCRNQGTPNAQAGYGVYWGQGHANNRSGT VSGHQDSNRAELRAAQQAIQTASRQGYSGVNIHSDSHYVRNAINNSDQFQRAPATNRD LMQSINSMKSNVSVSAHHVKGHSGHHGNSQAHSLASAGAKGGKK" CDS complement(join(119554..120163,120214..120308, 120356..120529,120576..120960,121394..121449)) /gene="CBG06074" /locus_tag="CBG_06074" /standard_name="CBG06074" /product="Protein CBG06074" /note="contains similarity to Pfam domain PF04004 Leo1-like protein contains similarity to Interpro domain IPR007149 (Leo1-like protein)" /note="Predicted" /db_xref="GOA:A8X0Y8" /db_xref="InterPro:IPR007149" /db_xref="UniProtKB/TrEMBL:A8X0Y8" /protein_id="CAP26298.2" /translation="MSSSEENSDASAPGTPVKSGTPSSRGSSPASPPAKQETTKKKAI LSDSDDDSDSRPAPKQLSDSSDDDRRPAGDGHASGGGNLFGDVSGSSDDDSDSEKKPR ESDTRARLSDSDAESRGSLNELQGIVMANPDEIEEKEKEEVHDTEMLSGRVSLEFAEE APYYVRMPNFLSVATHPFDPQHYEEDEDDDQAKMDEEGRTRLKLRVENTLRWRIRKDE NGEEIRESNAKIVKWEDGTMSLYLGNEIFDVTLMPLNVNNLPHLYVSQPNMMSAQHVL THRMNFRPHSTDSQTHRKVTLNMADRSRKNAQVKVMDSVGQNPEIVRRENARKEEESL RAHIRRTQMVRNNFKVRRPNYGQVYSDEEDMPSTSRKGKRKEAPIIGKREGLSLIYNV SYSGASSESEDEGDNHKKSSDSDSDEEYRKRKQQQKKQIVTSDEDSD" CDS complement(join(121770..122198,122261..123359, 123415..124323,124371..124519,124595..124678)) /gene="CBG06075" /locus_tag="CBG_06075" /standard_name="CBG06075" /product="Protein CBG06075" /note="contains similarity to Pfam domains PF05391 (Lsm interaction motif) , PF00076 (RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)) (2)contains similarity to Interpro domains IPR008669 (Lsm interaction), IPR003107 (RNA-processing protein, HAT helix), IPR022272 (Lipocalin conserved site), IPR000504 (RNA recognition motif domain)" /note="Predicted" /db_xref="GOA:A8X0Y7" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR003107" /db_xref="InterPro:IPR008669" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR035979" /db_xref="UniProtKB/TrEMBL:A8X0Y7" /protein_id="CAP26297.2" /translation="MSDVEMDSGSDGSEMEDLDESIQKVKDQMKEDDRDVNLANQLLV LLRKNGDFPELEQKRKRFVEWAPLTPLNWINWIEDFRKQEPEPSVEDVEKMFERAIFD ENDVTIWAERVMYSYKCAHDERSDKDFEYCRDVSLKSLRGFSSTQIHFQTCEKALTAI GNRYDAGGHIWMLFLGYELKHFRSRLKFHNLGIQYLFPEYINSSEFQQQADQVAHLFK RALRCPTDQLEEIYSQSEQFCSDYQQDSHVTELKKLYDATMRQKEQLAKFQILIDNHE TKKMGLKQFFEHEKKSGMPARVQMAHERMVAELSDDEDAWCAYGAWTEYELKLPQISV EIYERALRHCPYSYVLHQQTLLALERAQKPDEVIDRLWAKAKNNVINAAEEGRGLYRT YAFLLRRRIFLAGSKDFSPMAEVFDEGAAILKEWFTMAWDPNAEYRQMQAYFYASLMK DMDKCRKIWNDILASGFGRFAGKWLEAVRIERQFGDKENARRFLNKALNSVSDNINEI YLYYVQFEREEGTLSELDQVLEKVNAQASHRANRPQKKLPEKPYPSEKDNKDLKKRTA GGEPIVKKVKSADGGFKAPLPPTALKKPTPPSTQTTTSSTAPSVSFSTPKSQPGTEDA RTIFVSNLDFTTTEDDIRQAIQGVTSIRFARKAHTDETHRGFAYVVMENEEKTRIALQ KDRVSVKGRPMFVSEIVKESKRIFLFQISANDPEKRVGFKFSTGLEKAKIFVRNVHFQ ATDEELLFGPVKSVRRVTHRDGKPKGVAFIDFESESSAQQCVASGDKLVLRERDLEVA ISNPPAKKDKHHPHVGFAGKVASEEDGGRKGHAAKLQLVPRAIAAKAPQITARMDAMD VSEKPASSKASTSSTSASKPMSNDQFRQMFMRN" assembly_gap 124983..125471 /estimated_length=489 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(<126508..126609,126653..126841, 126889..127499,127544..127680,127924..128145, 128389..128580,128956..129121,129168..129263, 129371..129458,133040..133115,133272..133375, 137518..137655,137702..138423,138471..138755, 138907..139297,141263..141530,141575..141588, 141591..141685,141736..142024,142079..142402, 142447..142669,142997..143079,143124..143348, 143397..143675,143721..143828,143873..144067)) /gene="Cbr-klp-12" /locus_tag="CBG_06076" /standard_name="CBG06076" /product="Protein CBR-KLP-12" /note="C. briggsae CBR-KLP-12 protein; contains similarity to Pfam domains PF01255 (Putative undecaprenyl diphosphate synthase) , PF00225 (Kinesin motor domain) , PF00400 (WD domain, G-beta repeat) (3)contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR001752 (Kinesin, motor domain), IPR001441 (Di-trans-poly-cis-decaprenylcistransferase-like), IPR018520 (Di-trans-poly-cis-decaprenylcistransferase- like, conserved site), IPR001680 (WD40 repeat), IPR019821 (Kinesin, motor region, conserved site)" /note="Predicted" /db_xref="GOA:A8X0Y5" /db_xref="InterPro:IPR001441" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR001752" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR018520" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR019821" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR027640" /db_xref="InterPro:IPR036322" /db_xref="InterPro:IPR036424" /db_xref="InterPro:IPR036961" /db_xref="UniProtKB/TrEMBL:A8X0Y5" /protein_id="CAP26295.1" /translation="MASNLTADEEAGWFVSQKEQPWWQWLLRRFIASGPIPRHVAFVM DGNRRFAKNKNLGSVIKGHEKGFVQLAKILDWCSRFGIREITVYAFSIENFKRSEDEV GGLMRLAEEKFQKLLNDSEKLDEKRICFRFYGNRTLLSARLQKLMSDIEGRTEKFEGG RLNVCMPYTSRDEISRSFETIRTHVKEGKLNVEDINESMIDACLDSGCGGTPPDLFIR TSGEHRLSDFMMWQAADTHIYFDSVLWPEFGYYNLCKAILNYQYYRSTVSKMSSLNVS EETTWKMNFRGNDRDLISVKSIRPQGNREKLEGSRVCTSVLPNDPQVTIGGDRSFTYD HVFDMQTEQHVVYEACVEKLVDGLFEGFNATVLAYGQTGSGKTHTMGTAFDSAVTQKE QDLGVIPRAIQHTFRKIAECKTQSIEQGLLEPAFEVSVQFVELYNDDVLDLLSDDRSM SSSIRIHEDSRGEIVLHGVEQRAVFDMHGTMDILKNGALNRTVASTNMNEQSSRSHAI FTLHLKQQRVAVNPLDEAGEQKAGELEMEMLCAKFHFVDLAGSERMKRTGATGDRAKE GISINVGLVALGNVIAALGGANGKVSHVPYRDSKLTRLLQDLGGNSRTLMIACCSPSD SDFVETLNTMKYANRAKEIKNKVVANQDKSSKMIGELRSRIAALEGELLEFKQGRRTV DVDGHEVVNDQYNENVYLTSEVNHLRFRVKALNETLDILRTENIDLKAKQELNAISAL PTSADGEVDAVQSTFRKYLEELERTKSLLYESQSTCDQLRKDNAKWKAIGASRGAGGG ASEFNSQKLIEMAKIELEKQRKMMESVNIGGENASSEYSSMAQDEDGTSNEAEELLDE EDLDEDEDEIAAEKEQQEESEALQIDLNEVMIELDIKEKLIDQLERAERQNQQIRDTY EKKLRELMERIKDTETERDRVLNEGGKRGGNNEQMKAIKQEYELKISDLRKELKKIEA LDREHLKVIAKSQRELQEKTRLKSEVVDLKKAKVELIKKMNEDKKKQKAQQLANARAI ATKEKQTRLQANKIRTLEMKDKQREQFLKKTTQEVNALRKEKASAAAAARQANRGGPS RGGAPVVSSPARRVRGVVGATQAMKELTFSAKASKVKWDVIVRKIEESARRRQIVQKM EAELERYLNERHAVMLEIVENEKQFTQAQDVIYRDGLLEAIDSAKEKLQYVQDQITYQ QKLICDVDEDISSNAENEPELDVGLKKQTIKQLFDGCDTLSEARYLLQHLFDLCIDKA VLAAKVEAEFKECAARIEQLEQQSSLKEQLLTSIIEDKNLVDELDGLVPADLRKSRTS SQSSLLRSVSPSVVEDSHTLQNYKVRRHTATQEELLFASANASDANANPTSEAAADAG DSDEKKDKKKRIAFVSTSPASTSFANGPTSSPSFSRNTRLRSTVGGVSNNNNVRKPVV QPPTIVNGNGKVSTVRKGLSRLPSVNEDPEYGVFAKSFPGRSRSNLTASSSPSSAALL NARGSTSTKSVFARISPSWLSDTCAELIMRNNNRKQSRILPVKDGMRGSILTRTHTLE GHGRGVLSVDVTDTLMVTGSKDRTAKLWDIEACREIRTLGVHPNNVHLVKFVPYSNYV FTFSMYEARAWDYRSPDCICVKVLNSSGQVNDGDSIDVSQVMPRQNTIPFLETVITAA DVDPTGRHLFTSFAAYVRVWNLSEWKPLGRLNAASHSPKSEVSCLRTTLSPEGSILAY TGSRDHYVKEYDVGFGTGVIESKCEFTPPHYDNVTAVLPLNGHLYTASKDLNIMKFSL KDGKREHLELRAHQQYIQSLTGFGPKGKEFLVSACKDGTLRFWDVASSNRMKLVEEYS KAHQDGINSMCSTKAMLFTASGDSTVGFWKSN" CDS join(136434..136592,136644..136810,136861..136978, 137122..137160) /gene="CBG06077" /locus_tag="CBG_06077" /standard_name="CBG06077" /product="Protein CBG06077" /note="Predicted" /db_xref="GOA:A8X0Y6" /db_xref="UniProtKB/TrEMBL:A8X0Y6" /protein_id="CAP26296.1" /translation="MTSNSENRSNKLNEKRTSVQMKTSFSQEVYKTPIKQILTAPSQS HSRITPGGQLFLCVMGLLISVAISIWLAAFSRESGWRRAVFSSAAAICAILFVLLTIM TYKRAKNPPEPEPLPDLSQRRSTIGARVSKRSIAAGMSADSDCPTQVLVTGTRGSIPS " assembly_gap 139822..140755 /estimated_length=934 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(146115..146168,146315..146434, 146484..146752,146799..147051,147096..147248, 147294..147563,147596..147762,147825..148079, 148122..148600,148650..148744,148791..149178, 149225..149397,149438..149852,149906..150045, 150093..150158)) /gene="Cbr-sec-31" /locus_tag="CBG_06078" /standard_name="CBG06078" /product="Protein CBR-SEC-31" /note="C. briggsae CBR-SEC-31 protein; contains similarity to Pfam domain PF00400 WD domain, G-beta repeat contains similarity to Interpro domain IPR001680 (WD40 repeat)" /note="Predicted" /db_xref="GOA:A8X0Y4" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR036322" /db_xref="InterPro:IPR040251" /db_xref="UniProtKB/TrEMBL:A8X0Y4" /protein_id="CAP26294.2" /translation="MSSKLYSRSGVFSWSPRGIQSKGLIVADFAQFFDPNAASVEQKI DFLAASDIYEKAQLTPNVSLPTNYRFNELSWTSMCSDAHPNGIVAGGTEDGSVVFFDA DKFISGQKLEVLSARKDHHGHVLTIDVSKDGRWMASGGGSGQILLWDCANLKTPFSPG APNFPDQVKLLRWNHKNESVFASISSRRVSFWDLRRNGSPVLEFAEVIPGCDWSSMCW NPSDASQLMVASQSQNASVVQKWDSRFTQTPVKEYRHHNMGVTSLDWNKSDDRLLISS GCDGQIVIWNHETSEVLGGVGSLTGDWIRSVKWNEEEPAQFAIQYFQHPIQISSLTSL GVPQPGAEVLAARVSDQFVPAWHRAPLIGSSVSLGGRLATFWKSYDVMTQQFQHNVEV ETIGIQEDVGVEDIAQYLHVKDDKRNLGWYLHERAYAQSTDSSEDAELQQKVWLILLA LQEGAGRTKMLSYLGLVEPPNDDVFSDHNPTTHTNSQTTTQPTTTTDRSARSTSIVSA AETDNDVPEISVIDKFSEVNWAALNTSGWDLLVNTMRQDHLAVIRVLMSSNQHVAAMM YSAQHDTEHLSMILEDYNRVTQNSNTLSALTLALSASASAGRTETPSQHNSTREETIH KVNKICETFPDEKWRELLGLIIAHETNTEDIRLSATTIGQKWLSRGKNLRACIAFLIG GDIDQLLLSNTSFSQVDRLKQALVLHQVLKATSYSQGLEEVIEALIIDFTNRLLTQGA GSTAWNLVKWCQDGSAEMQELQWTCYNVAGGRDCTGDQPPLNPYNISQKQIQNHQSPN HPMRPFQQQPHPSVLAPPVIANGFNPYNPAQSQSPPPPNDYMSNRRSSNIAPMPPSST FYQTPSWNHKPLQPPSMPPNMPPPKPAAPVTPGWNDPPPMALKSAHPTAPKQNVMEIN WKPVETAPAPGGMMRGQQMNGFSGGMGYQNVMSNGIQGITINNQPPSATSSSFPSPTA YQQRPASVASVSAPPPIQLTPEDEKIVGPINALAQSIIDNARVQARMEKAKEFKTRIQ AELSPRLAANRLSVETKQHLTHLAYFIGMRQIREAQAVVSQMARNSSDFTEISSFLPA LKSLLSLALQ" CDS join(162217..162384,162712..162841,162888..163060, 163140..163462,163515..163728,163779..163949) /gene="Cbr-tag-89" /locus_tag="CBG_06079" /standard_name="CBG06079" /product="Protein CBR-TAG-89" /note="C. briggsae CBR-TAG-89 protein; contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domain IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8X0Y3" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8X0Y3" /protein_id="CAP26293.1" /translation="MFTSTIAPILVDALLDNSSSVVATTQYSVSQEVLDYVKRVKTIY HWLIPLMIIILLVAIIGNGLICISAKWLSSPVSPYLKLCISLAAADTWAALLLITGLI VNSYLPVIFGYQKKSMCFEAVLEMFRISGMLTSDLHLFALAINQFFGTMYPLKYKIMI TTRRIRTIIIALWTVPLMFVFGWFVAKEDDGLRHPTCNFTFYNRFPFRITIFLIFMLP LISTLIIYGCILVKLLKAKVEFETYCSDQKMKSSSPNNNFNKNNKTPAARSLSTRSTN VYSKLKLVWTTLLIVSTFSLSWGLCVLYFVMVCAEGCIIIYRENIGLYMSLFLSSTVN SLVMVKLASNPFIYTLRIKAIRSSVDRFVNKIRRRPTDAKSYYMTSLVPSTNIEPTAI " CDS complement(join(164171..164563,164611..164676, 164726..165238,165747..165831,165878..166189, 166248..166400,166449..166685,166733..166806)) /gene="Cbr-gem-4" /locus_tag="CBG_06080" /standard_name="CBG06080" /product="Protein CBR-GEM-4" /note="C. briggsae CBR-GEM-4 protein; contains similarity to Pfam domains PF00168 (C2 domain) (2), PF07002 (Copine) contains similarity to Interpro domains IPR010734 (Copine), IPR000008 (C2 calcium-dependent membrane targeting), IPR002035 (von Willebrand factor, type A)" /note="Predicted" /db_xref="GOA:A8X0Y2" /db_xref="InterPro:IPR000008" /db_xref="InterPro:IPR002035" /db_xref="InterPro:IPR010734" /db_xref="InterPro:IPR035892" /db_xref="InterPro:IPR036465" /db_xref="InterPro:IPR037768" /db_xref="UniProtKB/TrEMBL:A8X0Y2" /protein_id="CAP26292.1" /translation="MNQPSALGLNESRPKTNVRLTISANNLMDLDVFSVSDPICIIYE KTSGRKATTTDSITLPTWRDRQWTERGRTEIVWNDLNPQFKTTFLLPYFFEETQLLRF ELYDVDSKIVGTDLTAHDFLGRFECVLAQIVSYSTFRAHLGGQEQIGCQVKPKDKNSK NGTITIRAEEDEKNEKIQFDVCGEGLDRKDFFGKSDPYLNFKRRFDDGSSHMIHQTEV KPKTLNPRWATVQINTQALCGKNPDRPIIIECYDHEKFKKQNDIIGVSQISLGQLLSE AGKTGATLQIPLINEKKKAKKSKYKNAGILKFWNAKIVIEPTFLDFISGGTQLDFAVA VDFTASNGNPAQSSSLHYMASGYPNQYEIALRAVLSICQHYNSSKTFEAYGFGAKLPG QHGVSAVFPLDLRAHNPSVVGINGVMSAYRHALQSVTLYGPTNFSPIIEQVAKKAQRM INSTARYQILLIITDGIISDMYATINTVISASGLPLSIIIVGVGNEDFERMHELDSDD ALLQQDSRIAQRDIVQFVTMRDFLNRSTGGYLDTDTVMENLAREVLYEVPAQLTGYMK QRGFGPRSADDPWQRDSPPDDYDPMMDHVHYNNTATAPPLYPQV" CDS complement(join(169591..169690,169911..170023, 170067..170173,170724..170866,170913..171064)) /gene="CBG06081" /locus_tag="CBG_06081" /standard_name="CBG06081" /product="Protein CBG06081" /note="Predicted" /db_xref="GOA:A8X0Y1" /db_xref="UniProtKB/TrEMBL:A8X0Y1" /protein_id="CAP26291.2" /translation="MLYTERTRSFQVFLPLADFAVQFVIPGVLLALLHVGFIREPEID MGDLTKHNRFGRTPRDQTRILITTVTISFLVVQVPTAFITTLSLTINHFQNNNALMLL ALVTGHLQPLLSITTMAANTAALLTAYYVIVKDDDEDVGDSRTSISDNECQNELLLRA QQSTSRRGTRQVISRTYLSVSHSFDTGSLRSFSRKGSAIGDDIL" CDS join(171371..171913,171964..172200) /gene="CBG26318" /locus_tag="CBG_26318" /standard_name="CBG26318" /product="Protein CBG26318" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG91" /protein_id="CAR98921.1" /translation="METLRDILEEDNLDPMEIIKGSKEWEVDSEVVTVREASEASEDS KEDSAEVLRYKNEHQYANHFNHFIRVGSEVWAKDSVHNKGLVKTAREDLVASEDVERT REGSEDSQDLVEWEEGCKEDSKSLKGLVDLKDSEETLKMDLVDNSQLNVQLSRMNEFG SNQGFGGNGQGGYGKSQGNSLGGFGGSQGFGGSSQQQGFGGQESQSGFGGGLQGRYEG QSSEGQQNGFNEICKDFNDKTVILCNIYNFDCLFPFGFVHS" CDS 172844..173167 /gene="CBG26317" /locus_tag="CBG_26317" /standard_name="CBG26317" /product="Protein CBG26317" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG90" /protein_id="CAR98920.1" /translation="MSYSAIVFAFVVVITCARPQEQHDQVGQMGGIEGQAGLGQQGGE QGGQFGIGGQSGMGGQPGMGGDQNGGQMPGQFGQNGQGMIGGQQGMGENGQPGMTGNA QQQGI" CDS complement(join(173982..174029,175957..175971)) /gene="CBG26316" /locus_tag="CBG_26316" /standard_name="CBG26316" /product="Protein CBG26316" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG89" /protein_id="CAR98919.1" /translation="MSICRDPRNIKVPPLIEVPP" CDS 176007..176291 /gene="CBG26315" /locus_tag="CBG_26315" /standard_name="CBG26315" /product="Protein CBG26315" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG88" /protein_id="CAR98918.1" /translation="MFKLAALLAIIGLVMSAPQGQERQEGGQGGPGERGGSTPSGGIG GGFGGNQQGGQGGFQGNGSNFGGSESGQMGGQMGGQQGGQGEFGGQQRQQ" CDS complement(join(176384..176474,176522..176674, 176720..176833,176879..176988,177036..177203, 177352..177504)) /gene="CBG06085" /locus_tag="CBG_06085" /standard_name="CBG06085" /product="Protein CBG06085" /note="contains similarity to Interpro domain IPR013032 (EGF-like region, conserved site)" /note="Predicted" /db_xref="GOA:A8X0Y0" /db_xref="UniProtKB/TrEMBL:A8X0Y0" /protein_id="CAP26290.2" /translation="MHLTTIDGDEDLRIHNISILPSDQCATEDQRAAKCCCGDGFFFD FPRKKCEVSANVGFMFGRLNNGWSHMAVYGFAYPMILLMLVAPLCAVMLGMGKREKRE GDRRFPNPLYQMIWLLTFCGWLSVLSPLPFTVWYYFVGEGTRSLNQSIVMCHLFRTSM ETIPHMTDTMMTLFSVLLAAARFLTQYHRNTLKLRTVERFSRAIWVIIFVCVALAILR FFEHDTKVYQFCMGRYGANSSMGRSLHGTRWSTHKYCESVFLEG" assembly_gap 183038..183207 /estimated_length=170 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(185135..185260,185314..185460, 185826..186710,186776..187438,188012..188293, 188344..188476,188568..188828,189898..189993, 190044..>190183)) /codon_start=1 /gene="Cbr-magi-1" /locus_tag="CBG_06086" /standard_name="CBG06086" /product="Protein CBR-MAGI-1" /note="C. briggsae CBR-MAGI-1 protein; contains similarity to Pfam domains PF00595 (PDZ domain (Also known as DHR or GLGF)) (4), PF00397 (WW domain) contains similarity to Interpro domains IPR001478 (PDZ/DHR/GLGF), IPR001202 (WW/Rsp5/WWP)" /note="Predicted" /db_xref="GOA:A8X0X9" /db_xref="InterPro:IPR001202" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR036020" /db_xref="InterPro:IPR036034" /db_xref="UniProtKB/TrEMBL:A8X0X9" /protein_id="CAP26289.1" /translation="FSGHLYGTPRPIESYTDEDMMLMGNEGLLPPNWETAYTENGDKY FIDHNTGTTTWDDPRELPPGWEQVDDQNYGTFYVEMMSSSYPTGSDLISSVIYFAPST STGTVFNTPASRYSTATQTTFGGGSHRHKGFVSFRSQDEDQPDDDCEEGVPLLKAVQH TSSSKNHINRKTQYERPYGFGGSAVTIDQQVKYGTLPSSANHNNMYSHYNSGTLKSSS SPRDSGFDSSPTRYRKFGDPPDIGASSADYDHHSKMFSRSSNPLFTTDPARLGGELIS TKIVKGAKGLGFTLIGNDASSRGDEFIQVKSVLTGGPAAANGVLRSGDILVRVNGRLL LGATQKEACDVFVAIPIGEAVDIQVCRGYELFIDPTNRIITENVYAAAKNRDLHEIDI YKGPEGFGFTIADNLNGQRIKKIIFPSQCPNLMEGDTIVELDGRNVRPIPHTQLVDML RERPIGYRGKLVVKRGSPKTRSRTPSAAFRYGEPQSTMTDSAASAASAPVRSKTPAGR QSSKAEEEQSVRSTLQRQPAVTSEWEGMNGSAQTASRMRPSSTTLGFATPNYIPLSQY NQKPSDLITVSLIRKPVGFGFRLLGGVESKTVLSVGQIVIGGAAEEDGRLHEGDEIVE IDGHNVEGASHSEAVIFLEAAAQNKHVKLVVRRSAKVDPARRGSLNSAGPSGSYDVLL YRNDNDGFGFVLMSSHHKNGSTIGQIQPGSPAARCGRLSVGDRVIAVNGIDILNLAHP DIIALIKDSGLSVRLTIAPPDTAGPVLPMVSATLGRNFTMNGHYESNYGLPPPPPSAY ERHPPPTYLGFESLSINDRMPSNGNLIDVSLERGTKGFGFSIRGGQEFGAMPLFVLRI ADDGPAKADGRLQVGDQLTTINGQSTKGMSHDDAIRIIKQHPIVNLTVLRNRLP" assembly_gap 194306..194554 /estimated_length=249 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(194826..194875,194932..195128, 195178..195415,195530..195596,195773..195852, 196887..196956)) /gene="CBG06087" /locus_tag="CBG_06087" /standard_name="CBG06087" /product="Protein CBG06087" /note="Predicted" /db_xref="GOA:A8X0X8" /db_xref="UniProtKB/TrEMBL:A8X0X8" /protein_id="CAP26288.1" /translation="MPKKEARCTELFAGFRNELCMHDKLHLNIGLPSECAEDKDDFTL EIEKLQATLQEMLDCTSSPSTSLDSADKLQAGLAARRLIRIASEHHHLSTTSSCHSDS GNSSSRDFVSPFTVHGGASIGRLILIDIVRRDDLIGIVNPNDILLTVENIKISGMVRS EVNRILEDMMREHDQIAIEILPAGAISDDICELLADRKSPGELQTIIRENLYQKTVPY MLNSKIQSNECPPMF" assembly_gap 197089..197229 /estimated_length=141 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(207564..207782,207833..207970,208075..208194, 208250..208362,209954..210406,210454..210533, 210585..210781) /gene="Cbr-dpy-20" /locus_tag="CBG_06089" /standard_name="CBG06089" /product="Protein CBR-DPY-20" /note="C. briggsae CBR-DPY-20 protein; contains similarity to Pfam domain PF02892 BED zinc finger contains similarity to Interpro domain IPR003656 (Zinc finger, BED-type predicted)" /note="Predicted" /db_xref="GOA:P51558" /db_xref="InterPro:IPR003656" /db_xref="InterPro:IPR036236" /db_xref="UniProtKB/Swiss-Prot:P51558" /protein_id="CAP26287.1" /translation="MDGHSNTSVILHTYQQQQSQLIPSIIPQTLPDGYGLTTTISQPD FSGTNAFINTNPWNTTTFPTYRDNQYTNEVSVLNYPTVYDDFSKESTAGTLSDPSLHG SNSSSSTSDVGSSVDCSISPEPILMPCVKRGRPTENPCWAYFHRIDDQLVKCRLCTKV VRSACATNMTKHLERHHTDDYQKVTGQLKLFRMNDAGIRSKMHYQVADTPLTPIPVLP NSYVLPKMDPMEAFDASQYYTMQPDSTAINAQPFPQFDQPQTSADSQTWPLTHFWPNG AQNNMMPQLGEPSTSAIGASVIQEIRKLNLDSDQKRLELEMDQNRRLLLAQKADEKGR VVKTTTKPYQKRNRKTEHPVWAFFKRTGDGNAECIICQGVVKSPCSSNFMRHLMRHHS TEYNDVYLKWIEKRNVTHPGIHCTSVPPPISFPNKDNVRTEPIFTVK" CDS complement(join(211930..212115,212162..212413, 212462..212621,212670..212850,212898..212943)) /gene="CBG06090" /locus_tag="CBG_06090" /standard_name="CBG06090" /product="Protein CBG06090" /note="contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domain IPR004843 (Metallophosphoesterase domain)" /note="Predicted" /db_xref="GOA:A8X0X6" /db_xref="InterPro:IPR004843" /db_xref="InterPro:IPR029052" /db_xref="InterPro:IPR033308" /db_xref="UniProtKB/TrEMBL:A8X0X6" /protein_id="CAP26286.2" /translation="MRSSPSRRGYIYGIPALLLGFVVLWNESWSYWWLSTQWVEHEEK GRCDRILIVADPQLIGYKNEKFGSIARWDSDRYLSTGYSYAKWRFRPNAVIFLGDLFD EGFDSSDDDWHETYERFIGIYTIDNGDNTIYIAGDNDIGGESEIISESRRNQFYNYFR NNVTDLKNRYSFSETYLFENRNLKEITKAQVPIAKVMLTHVPYFIEGYKHTDVGMGMD LILSAHDHTTGIYEYQRNPPQAVLFSRIYDGSPTYISKIGQTEPIVELQTPTCSYR" CDS join(215994..216122,216504..216698,216746..216916, 216987..217046) /gene="Cbr-let-60" /locus_tag="CBG_06092" /standard_name="CBG06092" /product="Protein CBR-LET-60" /note="C. briggsae CBR-LET-60 protein; contains similarity to Pfam domains PF00071 (Ras family) , PF00009 (Elongation factor Tu GTP binding domain) , PF08477 (Miro-like protein) contains similarity to Interpro domains IPR002041 (Ran GTPase), IPR000795 (Protein synthesis factor, GTP-binding), IPR013684 (Mitochondrial Rho-like), IPR003578 (Small GTPase superfamily, Rho type), IPR005225 (Small GTP-binding protein domain), IPR001806 (Small GTPase superfamily), IPR003579 (Small GTPase superfamily, Rab type), IPR020849 (Small GTPase superfamily, Ras type)" /note="Predicted" /db_xref="GOA:A8X0X5" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR020849" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8X0X5" /protein_id="CAP26285.1" /translation="MTEYKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQV VIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQIRR VKDSDDVPMVLVGNKCDLASRSVDFRTVSETAKGYGMPNVDTSAKTRMGVDEAFYTLV REIRKHRERHDNNKPQKKKKCQIM" CDS complement(217340..217357) /gene="CBG26314" /locus_tag="CBG_26314" /standard_name="CBG26314" /product="Protein CBG26314" /note="Predicted" /protein_id="CAR98917.1" /translation="MYFQI" CDS join(217883..218179,218250..219479,219527..219718, 219771..219890,219938..220042) /gene="CBG26313" /locus_tag="CBG_26313" /standard_name="CBG26313" /product="Protein CBG26313" /note="contains similarity to Interpro domain IPR001313 (Pumilio RNA-binding repeat)" /note="Predicted" /db_xref="GOA:B6IG86" /db_xref="InterPro:IPR001313" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR040000" /db_xref="UniProtKB/TrEMBL:B6IG86" /protein_id="CAR98916.1" /translation="MTRKRKNVESDENPPAKNGFEGYGYSESKTQKTEEVGTFPNKNH FDRSEERSSDGWRKDYNGFSGGRGRRDGGFRRNDRGGGSRGRGGKRGFDARDFEKQYG RVGGNDDFNGEQDGSEAKQGASSNDRQRPDGDGREFPKEIVGYLRSIEQIKKKEGKIE DFILEKCAEEVAGQETVLLAWTEAAVVVEAVFGSCPQGAALFLSSVSRLKHKTLADLM FGGASARTIENLIYAMCPIADSEHVELLQKLSEILIDNWADAVIAQPSSFLIRAIVWV CCGLSAKPKTGEEKKRIYKGNEMKTRLKKVYDNFALLAFDENLNQSALNSPNFITLFQ DFIEADGMWNDKRGDEYVKKKLEKDDIEGISNAWYSPNGSRIWEKLMETCSEDSRSLL WLEFCSKNVSELTDNKFSNFPLQKIINSSTSLEMVTEIVESMSTKLSYLIDHQHSGVF LAFIRCAGRHPSSEKSILQQLRKHFRSASEAKKGQFLLNVLTLNKYDGSHFDAQMFTP KGTMLVSELVNYSKTKTLCAGFEQLTERQIQEMCCNKNTSRLIQAVLNSKTMSEEVKE KIIGAFDQNSWETLITDTYGSRVFEKIWSFVDVKRKQEIMKVLVEIHNTSKFWKFAML RCDLYLFRKSRKEWVEKMKKANS" CDS complement(join(220267..220401,220991..221110, 221401..222197,222331..222452,223098..223248, 223410..223463,223513..223604,225130..225257, 225402..225511,225712..225829)) /gene="CBG06093" /locus_tag="CBG_06093" /standard_name="CBG06093" /product="Protein CBG06093" /note="contains similarity to Interpro domain IPR001313 (Pumilio RNA-binding repeat)" /note="Predicted" /db_xref="GOA:A8X0X4" /db_xref="InterPro:IPR001313" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR040000" /db_xref="UniProtKB/TrEMBL:A8X0X4" /protein_id="CAP26284.1" /translation="MAQEAININRLKDKFKSFLCSNKDLSSRNSGNTSTGSTKEASTA SRTKNNKFQKPQENRSRSIGVKWMSNQWMESKRLRYPTTTTLDELHQRAEQCKLMLLE CQKRQGEADNWTHESRKSNRRRTPSHEPQTMVHDSLKPSFITGRQQQDKLIDDGRIAN QRPRPPNGNGQSTTDEGDIINSQNPQTQTNYQLQTSLQEVSKTPRSFINYPISFTQRS STVTGTTNGGTMDGSKNRKMMMHSTLVRHGAAIEQLLLGQETSAELSEILIDNWADAV IAQPSSFLIRAIVWVCCGLSAKPKTGEEKKRIYKGNEMKTRLKKVYDNFALLAFDENL NQSALNSPNFITLFQDFIEADGMWNDKRGDEYVKKKLEKDDIEGISNAWYSPNGSRIW EKLMETCSEDSRSLLWLEFCSKNVSELTDNKFSNFPLQKIINSSTSLEMVTEIVESMS TKLSYLIDHQHSGVFLAFIRCAGRHPSSEKSILQQLRKHFRSASEAKKGQFLLNVLTL NKYDGSHFDAQMFTPKQNSWETLITDTYGSRVFEKIWSFVDVKRKQEIMKVLVEIHYQ GLTVYSQCHLLNTSFVLETGEKGRSFHRIINPSNEISQFITV" assembly_gap 220598..220695 /estimated_length=98 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 223786..224455 /estimated_length=670 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(226922..226988,227099..227712) /gene="CBG06094" /locus_tag="CBG_06094" /standard_name="CBG06094" /product="Protein CBG06094" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0X3" /protein_id="CAP26283.1" /translation="MRAGGGAGKDQGKSKGRSGQYQENDERSRRSGNRGLAYEARWWG GAGQEGENERSRRLNTKTHLQEKIRARSGQEQGRAGAGQEQGRSRAGAGQEQGRSRAG AGQEQGRSRAGAGQEQGRSRAGAGQEQGRSRAGAGQEQGRSRAGAGQEQGRPEAGQEQ GRSRAGARQEQGRSRVGAGQEQGRSRAGAGEEQGRSRGGAGQEQGRSRAGAGEEQGRR EKMREAGD" CDS join(230909..230949,230998..231114,231464..231553, 231708..231793,232113..232631,232683..232831, 232875..233197,233263..233467) /gene="CBG06095" /locus_tag="CBG_06095" /standard_name="CBG06095" /product="Protein CBG06095" /note="contains similarity to Pfam domains PF12796 (Ankyrin repeats (3 copies)) (5), PF00023 (Ankyrin repeat) contains similarity to Interpro domains IPR002110 (Ankyrin repeat), IPR020683 (Ankyrin repeat-containing domain)" /note="Predicted" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR020683" /db_xref="InterPro:IPR036770" /db_xref="UniProtKB/TrEMBL:A8X0X2" /protein_id="CAP26282.1" /translation="MSSERSGPNGSLEDNGDYLPLEIIGDESSLDESHVCEDVIMSIT NKHVQCLARFSNNELLAKDTIGQNALHMAARVGDLNILKYLLDRLPELRDIQSANGET PAHISAAHGDMRALEMLLGGPVKSTMNSAMTRDVNGTSILMASVARGDTDMSIWLLRK FGKALALLDNNCKMLPVHVAAAQGNNEFLRAAIKFDNQMVNDRDEFGCTPCVYAVQGG CLGTVRFLVEKARSEMGSVSNRGQSLLHIACLCGHEHIVRWILNRSGSDAILWTTNDK ANAIHCSAYAGSVPVLSQLLNAFSKKKRHYVMTLRDTRGNTPLHLAAMNNHLDAALYM LENGADPALINSNGHSPQSIAALRHHREMERLVAAYQGKKRKSKSKKKAQSMHDLSQF ASLQSGPMSPGGVTSYSSNTNGFETSDRRAFSPRELSSGYSSNGDVAESIKSEAEIVR HRLRFIEDNVDSLRDTGAQTDMDLLQSHVKVLDDKTWAGLGLSAVEHIDRVLDELEFQ E" CDS complement(join(233902..233994,234394..234649, 234698..235384,235964..236100)) /gene="Cbr-inx-8" /locus_tag="CBG_06096" /standard_name="CBG06096" /product="Protein CBR-INX-8" /note="C. briggsae CBR-INX-8 protein; contains similarity to Pfam domain PF00876 Innexin contains similarity to Interpro domain IPR000990 (Innexin)" /note="Predicted" /db_xref="GOA:A8X0X1" /db_xref="InterPro:IPR000990" /db_xref="UniProtKB/TrEMBL:A8X0X1" /protein_id="CAP26281.1" /translation="MFSVPFLTSLTSHLGTTAIDDASDSLSCLISAFLFIIAAILTSA KTYVGSAMECWVPQTYSGEWGEFAENYCFLKDTYWFPSKEVMSDIPEYHKEEHRLSYY QWSSMYMAMAGLAFMIPKFLWKMSQSYTDLPLIYFCDTANAIRSETADNRKEKVKEMA VFMRSKITAVHAPGSISNVRMYFVYAIIKILYLCIAAAQFIVLGYFLGQKKNLLWGWT LFMNLINGVTWETTGLFPRLTFCDFTVREMAGNNRDETVQCVIGINEFNEKIFLFLWF WLVFLFFSTVVAHGFNASQMVKPYFINSLLHTLRKPHDQNQKKLFMKFGYDYLTMDGK LILSFIKSQSDLVAQEVAVAMYNNYLEHLKATRPSITQEDLHKGIEKMKKIQIDEK" CDS complement(join(238433..238600,238788..238931, 239009..239092,239135..239405,239454..239764, 239810..239910,239953..240039,240083..240222, 240270..240523)) /gene="Cbr-atg-4.2" /locus_tag="CBG_06097" /standard_name="CBG06097" /product="Protein CBR-ATG-4.2" /note="C. briggsae CBR-ATG-4.2 protein; contains similarity to Pfam domain PF03416 Peptidase family C54 contains similarity to Interpro domain IPR005078 (Peptidase C54)" /note="Predicted" /db_xref="GOA:A8X0X0" /db_xref="InterPro:IPR005078" /db_xref="InterPro:IPR038765" /db_xref="UniProtKB/TrEMBL:A8X0X0" /protein_id="CAP26280.2" /translation="MSSPPGEDFEKVLSTSSRPHNYCSSESSMSEDDGENEHVLKHGA PAEALTPDSERMVVLGKDLVQSAPGSIVPTENASWINRIKKAGASMMGSMRPSSSSQE TLPREETEKQHKKKWKARLWSTWNNIKYSSTWMSDRTDEYGGENDVVFLGKRYSTNKN LNGVSIGFEDFCSDYYSRLWITYRTDFSPLLKTDTTTDCGWGCMIRTTQMMVAQAIMI NRFGRNWRFVRRKKSHVTVNGEETEFDTEKMKEWMILKLFEDKPSAPLGIHKMIEIAA REKGKRAVGCWYSPSEAVFIMKKAITESASPLTGDTVMYLSIDGRVHIRDLEVETKHW TKTLMLVIVVRLGAAELNRIYVPHLMRLFSMDSCLGITGGRPDHSCWFVGYYGDQVIY LDPHVAHEYIPIDMDFNTSQEDPKKPKKCPERSYHCRLLSKMHFLDMDPSCALCFRFE SREQFDQDMRQLNLSQFIDIDQGEEHGMKRVRDPLFSVVYGERRRVPSYEREVSESDQ AQADKHGFEML" CDS complement(join(240674..240889,240935..241180, 241225..241643,241696..242112,242182..242239, 242281..242371,242436..242533)) /gene="CBG06098" /locus_tag="CBG_06098" /standard_name="CBG06098" /product="Protein CBG06098" /note="contains similarity to Pfam domain PF00328 Histidine phosphatase superfamily (branch 2) contains similarity to Interpro domain IPR000560 (Histidine phosphatase superfamily, clade-2)" /note="Predicted" /db_xref="GOA:A8X0W9" /db_xref="InterPro:IPR000560" /db_xref="InterPro:IPR029033" /db_xref="UniProtKB/TrEMBL:A8X0W9" /protein_id="CAP26279.2" /translation="MNWASKARSALTPRIWFTNKSGEDDGTRRNRSVIVRPMDADTNT SEEGCWPELKEFCRAHAVECTTFALFLLFGIFCIFNAFGFLGTNELKLRYDHYEQLVR KHCQFVEDRDLNGSEGKTEHPNATLVSLLAVVRHGDRYGLVMDGGCQIATEQESMEFD KYLATIEKQKNLFAIPVNLADKKLTPSKDKCAVGMLTPRGAIQEFMMGRFLFSQYKNT TLFNTTDTPVNITVTFSHLQRTFDSGVALASGLLDQNQTTIRTPIEFQQGSVYYGCTD SGCECDENIIMLLEMSKAERQGLYRLEVEEKTQQVVQKLFAELNYSTPNMDPLDIIDN LVSRFACPRKPLPCDDRYCALYLFFGDIFEYFSKQSAKLFDLNIGVERQYRVLSAYPI LRYVGLMAETNVKQVKLFSSHDTIVGAILRILTDSGKYTDWQVFAARIVFEIYETAEK VKLLRVVYDGQDITSLVKFCKSLEFGLCPVSDLKQFLAVGIFEMAGYKTFEQTCKDHR KEFYFV" CDS complement(join(242854..242967,243014..243196, 243242..243956,244006..244167,244215..244279, 244448..244647,244701..244758,244808..244843, 244892..244903)) /gene="CBG06099" /locus_tag="CBG_06099" /standard_name="CBG06099" /product="Protein CBG06099" /note="contains similarity to Pfam domain PF00328 Histidine phosphatase superfamily (branch 2) contains similarity to Interpro domain IPR000560 (Histidine phosphatase superfamily, clade-2)" /note="Predicted" /db_xref="GOA:A8X0W8" /db_xref="InterPro:IPR000560" /db_xref="InterPro:IPR029033" /db_xref="InterPro:IPR033379" /db_xref="UniProtKB/TrEMBL:A8X0W8" /protein_id="CAP26278.2" /translation="MLNPHIHGMPRRVRLVDWVLLIVIIIAVYTVLKYDSDLDSNRID LQPEKPTWNKEDIREMCQFLEHEVTGQEGDQWVKVIEGENTGLENKGGRESIIAKPED GNEYEKDLRLRGITLVFRHGERSPVSKVDDEVGCLPYRDSDRKAFAAYKELAESEELL AFLKLDPQLKQFPRVPLDAKCVSGMLTAEGAIQHVKLGKFFRHRYEKTKLFADGNSII KNLQIHNLLFLENQRIVADVVSSKYNRTVQSALAFSSEFLYKQRSLMAPIQIKASNFS YHCVDNYCSCPIHKSIRKIYEEEHLNQFNEMKSEDVVEEEKKLLSFEQFSTSFDPFQM IDVGLGRFVCRRKTLPCRSEECVTLDSFNKMINLTTTRGGRMFDDRIGVSRRLQSIEA YPIITYLANSISKIRKFPHSNYIQIFSGHDVTVGPILRVLGIPFVDPPHYTSRIVFEI YEHTNEGLYIRVLYNGINRTLDVRFCQNDDLKYGMCKASAFEKFAKSGLFELAGVSEF KEMCYV" CDS complement(join(245534..245668,245716..245880, 245961..246827,246860..247654,247704..247775, 247819..247929)) /gene="CBG06100" /locus_tag="CBG_06100" /standard_name="CBG06100" /product="Protein CBG06100" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0W7" /protein_id="CAP26277.2" /translation="MGSTQQLENLKREGIGKQQFDMENILTRSLYRVLNNTTHVPTTM SSKNQNVDKTHFSDRKSTVAIARPNNHQIGNASVVDMDMQMRLLAQEICGRVERKYER KLDEARERDRRDTERRLVSIRSEYDAKYQLQLGKLEKEKVRLLDQIAERERTLEHRME MRSAERENDLAAKQRTVENRAIELTLNKENFKKTREEWQRKMDGELEELRLERERLEV AASKTTDRRRSEMAIEAEVNMWKKRTSELEHDANDTRKRIGDLMEENFHLKDQTRSVS QVKRELEVTMMSLNETRDELSASKVENRRTGDYDQIKEENEQLKLEVSYLIERLRLKT TQRIQTAVEETIAEYSAKESKWRRIAGLSQKRIEVLTEKLKDSEIERDFLRQERKTMQ KMVGRGGSLSHNQSQSHHKSNSKVMFQSISRSNSTSSLSDGELEILNIRQRIQNLDVI AKELDASVEHFSSGTSRKTLDKNESNVELYDDFCRALHSAVLDEEGSPVHMTSSPQKP LRNTHRSQASPVHSEKDSEEEQRKPEENSWLKRGMRVVSPPAIKKSSQPDRTVSLAAV RKIEESENNKNEISLTTKPDEPEMSDFERRLKGREASKDQTERRSRIMELATPSKPSQ EVSTSIEGPPKPTSTDNPMFTGVDPVMAEYMKKVLAARAQTPTTNTVENPTVQTSPVA AEVPRGREVEVTLADELDLELDQPTKADDEWW" CDS complement(join(248194..248254,248304..248437, 248482..248592,248655..248771,248818..248920, 248968..249074)) /gene="CBG06101" /locus_tag="CBG_06101" /standard_name="CBG06101" /product="Protein CBG06101" /note="contains similarity to Pfam domain PF09782 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit contains similarity to Interpro domain IPR019174 (NADH dehydrogenase 1, beta subcomplex, subunit 6)" /note="Predicted" /db_xref="GOA:A8X0W6" /db_xref="InterPro:IPR019174" /db_xref="UniProtKB/TrEMBL:A8X0W6" /protein_id="CAP26276.1" /translation="MGNQYVKPQRTGNSPYTRSGVPPPALVKTGDKPLHRVNDRMSLE LHMADERVRASGLSPAEREWRKKWVHDQHLHADEPVVVDAVHRQLNPIRTAYRLPWDK FYLHYLKPTFGVYYGTAVRVTVPKLLMAFVVVQTAYYYWKYEVKDWTHLRGLESMPQK EVIVNAPAIESKFPGLMDKGLANPSKDDYYTPTFNKRTAYLDVGETKRPW" CDS join(249592..249634,249680..249799,249843..249939, 249986..250265,250317..250523) /gene="Cbr-acl-3" /locus_tag="CBG_06102" /standard_name="CBG06102" /product="Protein CBR-ACL-3" /note="C. briggsae CBR-ACL-3 protein; contains similarity to Pfam domain PF01553 Acyltransferase contains similarity to Interpro domains IPR000872 (Tafazzin), IPR002123 (Phospholipid/glycerol acyltransferase)" /note="Predicted" /db_xref="GOA:A8X0W5" /db_xref="InterPro:IPR000872" /db_xref="InterPro:IPR002123" /db_xref="UniProtKB/TrEMBL:A8X0W5" /protein_id="CAP26275.1" /translation="MSLVTSVSKIMFIRGSNKLICHNKETFVKLLKNESQPLITVSNH RSNIDDPLMWCILKFREFWRYKDRHRYTLAAHNICFTKQFHTTMFSLGRCVPCVRGEG VYQKGMDFCVDMLNDNKWVHIFPEGKVCVAAEEPLRFKWGIGRLVMDAKTDPIILPVW CKRMEDVWPIHPPYYPKFGNTVEVYIGEPFSLSDLKKKISSKGLSTEQMRKIITDEVQ TRMCQLGEKVNDLPKGSAQAILRKNPPIEY" CDS 253350..253517 /gene="CBG06103" /locus_tag="CBG_06103" /standard_name="CBG06103" /product="Protein CBG06103" /note="Predicted" /db_xref="GOA:A8X0W4" /db_xref="UniProtKB/TrEMBL:A8X0W4" /protein_id="CAP26274.1" /translation="MVNSRKQSIVEAAEAHFDKNTLILIVNVVILTVLISLLYMVATS AMAASGPHNEN" assembly_gap 253680..253689 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(254293..254651,254989..255097, 255329..255504,255552..255747)) /gene="Cbr-prx-2" /locus_tag="CBG_06104" /standard_name="CBG06104" /product="Protein CBR-PRX-2" /note="C. briggsae CBR-PRX-2 protein; contains similarity to Pfam domain PF04757 Pex2 / Pex12 amino terminal region contains similarity to Interpro domain IPR006845 (Pex, N-terminal)" /note="Predicted" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR006845" /db_xref="InterPro:IPR013083" /db_xref="UniProtKB/TrEMBL:A8X0W3" /protein_id="CAP26273.1" /translation="MACQCLRVDQLDAHVLDSEIRTIAQDSVDDIVNQMPVWISRVFE KLRPELKVTLDAVLWTHRFSRGASPGQEQMDIAYSGYSPKLITQHFVMEVFLPYITRR LTDLSGRMEFARSYAKLEAIFELGSLLHFLYFLRSGGHSTLTESILSLRNWNNHQPTI SSVNYDNQNRELMWHAFRDVILLTYPFIERIRQRVVKKQKLVRKFGSTIGGSDIECVV CDKPAVIPMIGQKCGHVACYTCVATSGNSMTCSLCSEDKEEQRMDFLAKKLEEDSTIL IDQ" CDS join(256959..257147,257207..257647) /gene="Cbr-ttr-50" /locus_tag="CBG_06105" /standard_name="CBG06105" /product="Protein CBR-TTR-50" /note="C. briggsae CBR-TTR-50 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)" /note="Predicted" /db_xref="GOA:A8X0W2" /db_xref="InterPro:IPR001534" /db_xref="InterPro:IPR038479" /db_xref="UniProtKB/TrEMBL:A8X0W2" /protein_id="CAP26272.1" /translation="MKSIVVFALFSVAAAQFGGYGRGRGGPGGPGGPGGFEGGPSNGN ELTYEAKGRLICGLTGVDKVRVVLWDRFRGRENIVYDETYTDVVGNFRLRATRNGFDG NLIQPFLTIYHDCDDAATPGLRKMTVQLPPQYTNQGSLALKSFDIGTWNLETSFAGEE LEIQGGALGNRPLGGGGGFQQGLRGQFGGNREIFAHGGRAEFGESSITV" CDS complement(join(258412..258579,258631..259443, 259604..259672)) /gene="CBG06106" /locus_tag="CBG_06106" /standard_name="CBG06106" /product="Protein CBG06106" /note="contains similarity to Pfam domains PF01585 (G-patch domain) , PF00076 (RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)) contains similarity to Interpro domains IPR016967 (Splicing factor, SPF45), IPR003954 (RNA recognition motif domain, eukaryote), IPR000467 (D111/G-patch), IPR000504 (RNA recognition motif domain)" /note="Predicted" /db_xref="GOA:A8X0W1" /db_xref="InterPro:IPR000467" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR003954" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR035979" /db_xref="InterPro:IPR040052" /db_xref="UniProtKB/TrEMBL:A8X0W1" /protein_id="CAP26271.2" /translation="MYNDDEEDVPTGPPPAKQGKHYLRQKLIKSSAPPPVIDLSARNK PMTTAATPKTFQPIRANPVAENISFLPKAATDESVMIFGEEHIKCEYFPMTPNNFEIL AKELNDRKQREKNAREIAKRLQREHEEEDKKRSMGAAIAPPTMLMEPEPEVVKEKDDI PEDKPQSSFMPPPSFLPAFGKSTSRGLGIAANIMKKHGYREGQGLGKSEQGMSTALQV ERVGARTGNIVGESPRVPSFAANSTEAVNNATKILQLWNLTDVGEVSGEEGKKEFASE IKEEMEKCGQVVEVIVHVSENEEDESRRVRVFVEFPTNAQAIKAFVMMNGRFFGGRSV GAGFQNVDDYNSRSF" CDS complement(join(260133..260213,260265..261210, 261256..261464)) /gene="CBG06107" /locus_tag="CBG_06107" /standard_name="CBG06107" /product="Protein CBG06107" /note="contains similarity to Pfam domains PF04836 (Interferon-related protein conserved region) , PF05004 (Interferon-related developmental regulator (IFRD)) contains similarity to Interpro domains IPR007701 (Interferon-related developmental regulator, N-terminal), IPR006921 (Interferon-related developmental regulator, C-terminal)" /note="Predicted" /db_xref="InterPro:IPR006921" /db_xref="InterPro:IPR007701" /db_xref="InterPro:IPR039777" /db_xref="UniProtKB/TrEMBL:A8X0W0" /protein_id="CAP26270.1" /translation="MGKSKGNKNKDKDAYAGPIKSGRRESDSDDSEGSAFTYNEDMQS IMGDVEDMDDVYDQLVDNLERAQNKNATTRLDGLHRVNLALRAKNVPEFIGRNKETMM SVAARMGNKTDSEAHLLATLVGLVAVQAGEEISDLIAEPMSQMRTILMDASRCVSLRT TCANSLAIVTRICCSEDDQVSANAKACRFAWANTKVSGSANDDGHAKLVATSLAAWCI ITLDADFQTINEAVADQPKIVTILSSNQLEARLAAAETLAFLHEFMQDTRPGFRFPNK EHVLDLLDGMMNDCSKKKTKKDKRAQRYAVRDIRAFIADEDDAPEVSVKIGSQTLSLD SCGIKMFYDMTCDLLHGGLAQQLLTNEVLRDVFDLGPVPLESEGTVNKQTRLAVHDAA DKHRNQVRGKQRDKRSAVY" assembly_gap 262304..262611 /estimated_length=308 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(262928..263007,263052..263375,263422..264878, 265197..265307,265355..266016,266076..266207) /gene="Cbr-mars-1" /locus_tag="CBG_06108" /standard_name="CBG06108" /product="Protein CBR-MARS-1" /note="C. briggsae CBR-MARS-1 protein; contains similarity to Pfam domains PF09334 (tRNA synthetases class I (M)) , PF00133 (tRNA synthetases class I (I, L, M and V)) , PF08264 (Anticodon-binding domain of tRNA) , PF01588 (Putative tRNA binding domain) contains similarity to Interpro domains IPR015413 (Aminoacyl-tRNA synthetase, class I (M)), IPR013155 (Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding), IPR002300 (Aminoacyl-tRNA synthetase, class Ia), IPR002547 (tRNA-binding domain), IPR001412 (Aminoacyl-tRNA synthetase, class I, conserved site), IPR014758 (Methionyl-tRNA synthetase)" /note="Predicted" /db_xref="GOA:A8X0V9" /db_xref="InterPro:IPR001412" /db_xref="InterPro:IPR002547" /db_xref="InterPro:IPR009080" /db_xref="InterPro:IPR012340" /db_xref="InterPro:IPR013155" /db_xref="InterPro:IPR014729" /db_xref="InterPro:IPR014758" /db_xref="InterPro:IPR015413" /db_xref="InterPro:IPR023458" /db_xref="InterPro:IPR029038" /db_xref="InterPro:IPR033911" /db_xref="InterPro:IPR041872" /db_xref="UniProtKB/TrEMBL:A8X0V9" /protein_id="CAP26269.1" /translation="MGVDLNEIKKNFNVNTSAYVEKKDPKSILPQPGKRNILITAALP YVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTATETKALQEGCTPRE LCDKYHAIHKGIYEWFGIDFTHFGRTTTDHQTEICQDMFLKLHKNGFTTTQTVDQLFC NQCDKFLADRFVTGTCPNCAYDDARGDQCDGCGKLINAVELKDAKCHMCKSTPEVKQS THIFLSLDKLQESTMDLIMKQMDLPGSKWSANAKGITKSWENQGLEPRCITRDLKWGT PVPLEGFEKKVFYVWFDAPIGYLSITKCVLGDDWTKWWKNPSNVELYNFVGKDNVAFH GVMFPCSQVGANDNYTVVNHLCATEYLNYEDTKFSKSRGTGIFGDAAQRTGIPADIWR FYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVANFFGGVIPNMDLTE ADATILEEIHQECLQWDTQFDGVRLKDAVKSILNVSRIGNQYMQSQTPWVLMKGDDAA KKRAGTIIGVAANIAYHLAVILYPVMPSVSETIRQQCDLSKLPLFSPFPRNYLKPGHK IGKPSPLFQKLDPIQIAEFKAKFGGGQNPQNAAVAAAAGNQKQQKKTPPTKEKKGGDK KKMASTAAFAELEQGAKLISQLLTTNLKKFEQAKALFARNKLQKLEEENRQLTLDAKS LQQQLVELEKAAGIKQIPKPVASCTPTPTSTPASGIINQQKNATPAPQPTAEPKKAKE QKKGKGGGAAAAAPVDDAIDIGRLDMRVGRIIKCEKHPDADALYVEQIDVGEESPRTV VSGLVRHVPLDQMQNRLVVVLCNLKPAKMRGVESRAMVMCASTPDKVEIMEVAADSKP GTPVVCPPLTHRPDEQLNPKKKIWETVAEDLKVSAEGFAEWKGHPLLVGNATKMTAPT LRGCHVK" CDS join(266499..266606,266656..267146,267196..267300, 267344..267484,267529..267709,267763..268569) /gene="CBG06109" /locus_tag="CBG_06109" /standard_name="CBG06109" /product="Protein CBG06109" /note="contains similarity to Pfam domain PF08159 NUC153 domain contains similarity to Interpro domain IPR012580 (NUC153)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X0V8" /db_xref="InterPro:IPR012580" /db_xref="InterPro:IPR039754" /db_xref="UniProtKB/TrEMBL:A8X0V8" /protein_id="CAP26268.1" /translation="MAKKKSVKSNNGLNDERFSRIKSDPMFSGLKSSDKKVVIDKRFA AALTDERFSTRAKVDMRGRKQKKTVGNNMLDLYELEEDEDDQQKNKKSTEKKLKNKRK KVEEDDKELDEFFDENDGEEEEVDDEEDADDEKEGTDNEEVEDEKEKTVGLNGFKKLD LARGEGNVDSSSDDDSSDEEEDELDEQEQGIELDLANLDRDVDQVEWTSRRLAVCNLE WDQMNCEDILMLVKSFTPQEGSVVSVGIYLSDFGKEELEKEEKTGPALKLAKPVEEYK EDEMDDETRTAVREYLVNKLKHYYAVITFDSVPSAVAVYEECDGFQFEETGLKMDMRF IPDDMEFEEDRVKEFLNAEDVNMAKYKAKKKSKSAIISTGAKIGWDEDDPSRKKKFLE AFNGDEEAGKDLIVDSDDSDDDESNRNKLMALLHTDERKSKLDVDWEGEEKDDDDDGS DSSDGEYVKVDDDDDEIGVKNKNKDSDDEEEDVETKQEEEKLTGYKAYKKKQKAKLME NKLKRKGTAAGEAVANIKTVAAAETIASDDRFSALFTDSAFAIEPSSKKFKGSLLVSK QAEQKLKGSTISNESKPSSQPEDLVQKLKKQADKWNKKKSAPRI" CDS join(269588..269789,270138..270580) /gene="Cbr-lys-6.1" /locus_tag="CBG_06111" /standard_name="CBG06111" /product="Protein CBR-LYS-6.1" /note="C. briggsae CBR-LYS-6.1 protein; contains similarity to Pfam domain PF01183 Glycosyl hydrolases family 25 contains similarity to Interpro domain IPR002053 (Glycoside hydrolase, family 25)" /note="Predicted" /db_xref="GOA:A8X0V7" /db_xref="InterPro:IPR002053" /db_xref="InterPro:IPR017853" /db_xref="UniProtKB/TrEMBL:A8X0V7" /protein_id="CAP26267.1" /translation="MKLLLSVLVLAGVANAVRNGIDFIQPVSVATFQCVKNAGYSFVI PRVFTSLGKVDSTGVNNVKNARAAGLTDVDGYVFPCPSTSCPSAGNQVKAALDALKAA GTHVSTLWLDIERLAWPANHASNRAFIEAMVAEAKAYGQQVGIYSNYYNWQDIVGLDY HGQLSLMLWWAAYDGVKDFSKFAAFGGWTRPTIHQWQGTTAGPCGVSVDMNYVP" CDS join(271003..271204,271281..271723) /gene="Cbr-lys-10" /locus_tag="CBG_06112" /standard_name="CBG06112" /product="Protein CBR-LYS-10" /note="C. briggsae CBR-LYS-10 protein; contains similarity to Pfam domain PF01183 Glycosyl hydrolases family 25 contains similarity to Interpro domains IPR002053 (Glycoside hydrolase, family 25), IPR003006 (Immunoglobulin/major histocompatibility complex, conserved site)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X0V6" /db_xref="InterPro:IPR002053" /db_xref="InterPro:IPR017853" /db_xref="UniProtKB/TrEMBL:A8X0V6" /protein_id="CAP26266.1" /translation="MKLLVSLLVLAGVAAAARNGIDFIQPVSVATFQCIKKDGYSFVI PRVFTSVGTLDHTGIQNVKNARAAGITDADGYIFPCLATHCPSAANQVKQTLDALKGA GTHVSTLWLDIERLAWPANHGSNRAFIEAMVKEAEALKQQVGIYSNYYNWQDIVGLDY HGLSHLMLWWAEYDGEKDFGKFRAFGGWTRPTIHQWHGTETGPCGVSVDLNYVP" CDS complement(join(272500..272948,272995..273196)) /gene="Cbr-lys-6.2" /locus_tag="CBG_06114" /standard_name="CBG06114" /product="Protein CBR-LYS-6.2" /note="C. briggsae CBR-LYS-6.2 protein; contains similarity to Pfam domain PF01183 Glycosyl hydrolases family 25 contains similarity to Interpro domain IPR002053 (Glycoside hydrolase, family 25)" /note="Predicted" /db_xref="GOA:A8X0V5" /db_xref="InterPro:IPR002053" /db_xref="InterPro:IPR017853" /db_xref="UniProtKB/TrEMBL:A8X0V5" /protein_id="CAP26265.1" /translation="MKLLLLVSAFLAVSSAARNGIDLNVPVTVSTFQCVKNAGYSFVI PRIYHSLGTVDTTGVQNVKNARAAGLTDVDGYIFPCPKTSCPSAANQVKAALDAVKAA GTHVSTLWLDIERLNWPANHATNRAFIEAMVAEAKAYGQTVGIYTNYYNWQDIVGLDY HAQSNLMLWWAAYDGVKDFSKYAPFGGWSKPTIHQWEEITSKGPCGISGVDMNYVP" CDS join(274800..274862,274974..275225,275267..275401) /gene="CBG26312" /locus_tag="CBG_26312" /standard_name="CBG26312" /product="Protein CBG26312" /note="Predicted" /db_xref="InterPro:IPR032817" /db_xref="UniProtKB/TrEMBL:B6IG85" /protein_id="CAR98915.1" /translation="MHYLGNNVTNSDSRPNQTFTERDYALTAIVPFSEYSLRIAIEFF TSTSQYPDVANSLIAINIIKFLGEPLYMKYTCISASTWKLAASSLILGNVAVTSLLQR CTQVMADFCKDWSAAGDLRLPRSRILEIISALQATPLPILLFCFVGF" CDS complement(join(280348..280613,280661..280766, 280819..281068,281432..281727,281814..281963, 282006..282213,282263..282336)) /gene="CBG06116" /locus_tag="CBG_06116" /standard_name="CBG06116" /product="Protein CBG06116" /note="contains similarity to Pfam domain PF01026 TatD related DNase contains similarity to Interpro domains IPR018228 (Deoxyribonuclease, TatD-related, conserved site), IPR001130 (TatD superfamily)" /note="Predicted" /db_xref="GOA:A8X0V4" /db_xref="InterPro:IPR001130" /db_xref="InterPro:IPR018228" /db_xref="InterPro:IPR032466" /db_xref="UniProtKB/TrEMBL:A8X0V4" /protein_id="CAP26264.1" /translation="MSDKGNGRELYQPPAKRTEKGSNPSTLVKEECRESFRKITPNCC EEDDDGDDTISSPVKNSTNTDKSPSASSKNWRTTTPSLSSTEPSSDIIHNVQEKCNIG SRRNKTDKKPVTTRGPGFPKKETPSSGRNDDSENHNKALLEKFHCTDMPYIDSHCHTD FIYTMLMRSKQFKPTDGIREWIYRYPDAFPRAFAGMIANFIKPELFVNCADNEEYDFR WILEQLRSNYYLGTTWGCHPHHAEKWGKMDAFWNTMEEILSRGSDLKVLAVGECGIDL HRCESSLEIQKEVFDKHVALAYKYRLPLVIHCRNGNKGHAEEECLEILKKHMVQKHPF LKIHRHCYTENWEIARQWLKQCPDVHFGYTPAILTFKEPQIDAVRRIPLDRILLETDA PYFKPKCFDSFTPPKVSLPGMAIATALRIAEIKNCTLEEVLRATYDNTRRCYQIPVY" CDS join(282826..282932,282978..283072,283172..283617, 283685..283827,283874..284099) /gene="Cbr-ragc-1" /locus_tag="CBG_06117" /standard_name="CBG06117" /product="Protein CBR-RAGC-1" /note="C. briggsae CBR-RAGC-1 protein; contains similarity to Pfam domains PF09439 (Signal recognition particle receptor beta subunit) , PF04670 (Gtr1/RagA G protein conserved region) contains similarity to Interpro domains IPR019009 (Signal recognition particle receptor, beta subunit), IPR006762 (Gtr1/RagA G protein)" /note="Predicted" /db_xref="GOA:A8X0V3" /db_xref="InterPro:IPR006762" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR039400" /db_xref="UniProtKB/TrEMBL:A8X0V3" /protein_id="CAP26263.1" /translation="MDSDLEEDFDDYHYGIDEDDDYPDSRPTVILMGHKRSGKTSIRK VVFQKMSPNETMFVESTARITRDTICSSFINFETIEFPGQMCPFDDSLDPIGIFQKCE ALLFIIDAQAELQEPIATLVEYFCRAYKINQNIKFEVFVHKADGLTEEARVETKFNIY HQVKETIKDQIDVDLQVTYHLTSIYDHSIFEAFSKVVQNLVKQLPTLERLLDVFNNSS KVTKSFLFDILSKIYIATDSEPVEMSIYELCCDMIDVTLDLSSIYGVSENGSNYDERS SSVIRLKSEQIMFLRQVNKHLALVFIMKEDGNEKAGFIDHNFGVFKAGIEQVFKVKNR GVNF" CDS complement(join(285570..285693,285739..285944, 285993..286130)) /gene="Cbr-rps-11" /locus_tag="CBG_06118" /standard_name="CBG06118" /product="Protein CBR-RPS-11" /note="C. briggsae CBR-RPS-11 protein; contains similarity to Pfam domain PF00366 Ribosomal protein S17 contains similarity to Interpro domains IPR019978 (Ribosomal protein S17, archaeal), IPR019979 (Ribosomal protein S17, conserved site), IPR000266 (Ribosomal protein S17)" /note="Confirmed by transcript evidence" /db_xref="GOA:A8X0V2" /db_xref="InterPro:IPR000266" /db_xref="InterPro:IPR012340" /db_xref="InterPro:IPR019979" /db_xref="InterPro:IPR028333" /db_xref="InterPro:IPR032440" /db_xref="UniProtKB/TrEMBL:A8X0V2" /protein_id="CAP26262.1" /translation="MSEQTERAFLKQPTVNLNNKARILAGSKKTPRYIREVGLGFKAP REAVEGTYIDKKCPWAGNVPIRGMILTGVVLKNKMTRTIVVRRDYLHYIKKYRRYEKR HKNVPAHCSPAFRDIHPGDLVTIGECRPLSKTVRFNVLKVNKSGTSKKGFSKF" CDS join(286776..286982,287919..288323) /gene="CBG26311" /locus_tag="CBG_26311" /standard_name="CBG26311" /product="Protein CBG26311" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG84" /protein_id="CAR98914.1" /translation="MLMTDSYDMVGPSTSYAPQMDHMNPSSVGNPSSHSGMNQQQHQS TNSGQQMQQPPPPSRKFESANNSFTQQPQQQQQQLPPPPPQPKKPASKNKPTPRPVQQ QMQHPPQQQQLPMIAQAQMTPSKIMMEPPSTTMVPSNNQMNQMYNGNGSENYAGYQSM EPGTSQQQYNDFQQPQSHEAMLQHHQNQGHPQVIQAKVVPSMN" assembly_gap 288593..289174 /estimated_length=582 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(291031..291149,291226..291349, 291397..293483,293535..295380,295429..295553, 295608..295860,295998..296096,296142..296574, 296603..296714,297197..297245)) /gene="Cbr-mig-38" /locus_tag="CBG_06120" /standard_name="CBG06120" /product="Protein CBR-MIG-38" /note="C. briggsae CBR-MIG-38 protein ;" /note="Partially confirmed by transcript evidence" /db_xref="InterPro:IPR015671" /db_xref="UniProtKB/TrEMBL:A8X0V1" /protein_id="CAP26261.2" /translation="MTLWHSFTASLDQYPTRGARRRCRLKNVFDIAQQRCGRSLRGCC LHFIPPSESCEDEWFSYTQTDEFNRPGRSPGAGGAYYEPGNIDVSHFHSSITINVLKA IRKIIIFNSEVSRFSKFPIQNIPLADEPLLSPGQGLEFDLAGPIDDYGYDQLGLTPNG GPNGHHQQPGTSNDMYQSMNIVPSADNFAQHMQPSTSDEYNSFEMPTVISGNMDSNSY QDLGIVDPNSYYANQQPSTSQGNGMLMTDSYDMVGPSTSYAPQMDHMDPSSVGNPSSH SGMNQQQHQSMNSGQQMQQPPPPPKPKPKKKAPPKKKPQPPAETTVGSLLTKANKLSQ QENNNENQAVKVEARVTTEDMMIISQLMAEINTLRNKEQNGYDHKEGIATLEAQIAHL FSKGLTQSSSNDSAENTILKQIQSLSGNGAPSTQQQPQQQQQQLPPPPPQSKKPASKK KPTPRPVQQQMQHPPQQQQSPMIAQAQMTPSKIMMEPPSTTMVPSNNQMNQMYNGNGS ENYAVYQSMEPGTSQQQYNDFQQPQSHEAMLQHHQNQGHPQVIQAKVVPSMNQRTHNY RQAVIFPSHNKNGPGPSPQPLSHESHHMDQIHDQQYHPHDHQRPQSQQMYVPETPYQT QEGGATLGDVIRQRHGRYQGPQDAPHLRQQLISNVNASTNKQMLQRSQAPTPSPGNFH NNNMHQPPYGESYQPHGSYPASHDMQPHSHSHHGYDSQLEASNDFYDDPISQQQNENS TMLVHPDSQQRQQYEQREMYIVMGNQEQLVEPDPDSVPVVESPPPEASLILSKEELLE KLTERQDVREEAMKNMLDEQMKCLNDPDVTPFRGKTDIFERLLPYHHFSVGEEPVSDC KFYFLRRIENTSNFSVDSMYEKTITNTFSQADALGRKVRNALLRNEAKRGTEWEENLY LFLDTESERRKLEEDRRLAELDPYTFVQNSDIVQAVKSNRLDIELSIRSAPQMPEHLK GQELEDGALTAVYKEYEFDSYDENRPRSSPFVGELELEDDTGVEPETEDETGIEPELE EQEGEASPEQSPNDQIAQFFPIPSPNRFRDESQSPLDWRDDHESPMLSPETVQFPTTS SRGIEKVDVFPYGQLPETARKDLQPHTSESLGSSDQSSSSEGTPEVSQSHDVRTPPPP VPSTSSKPETSSSECIPITSTSSITPVASRSRRPDSDEGSPEIDDDFSMSPVEKRIPV EDIPPIPLPVPVHMIKQEKEDTIPKLKLRVSVAVLQKGIEMAASEDDDDIQEIKRKPI KVKLSLRDIKREEPSPDREVSRNVNPARPAPTTKSTIPVESAPQDTSTPTQKPLFKTP LPTPLKTTESRKRKRSDKIEGTPKEKKSDQAPSNFVTPKNGLIPEQDVGTERFLKTMT VGRRIIMKIGKIPNNINHFVTPRRDGKGNMHKDIRATEHTRLKMRLYKKNGQLAVEVT ERNPEELKKKDDEPSTSGGPSGSGSIVPTPTIPTTAVKARPAPASRKGSIDIAGKDKK SSTIKSKNTFSNRFNPFATASKPKPLTISVPTPAPSVSGVMKFNTPAGSSSSVVPSSA KPSAASVAPTTNVQTTVRQQQPVSSIQNLIKTTPIVPNITVTNSNTCGDLPKPKPPVE TTMNSLLPWMFDRVETVEKPKIVKTPQPTSSSVPSSASTKDLLHVRTEPVEGVAVTAQ ESPRASSSLSMSFFEDDKSNGYHFLNSPKRTSEPLPAISFSDDDDDDVHNTFQHATDH MKSKLKKPVNGAAPILPWSTDP" CDS join(298490..298627,298693..298796,298858..298945, 299002..299031) /gene="CBG06121" /locus_tag="CBG_06121" /standard_name="CBG06121" /product="Protein CBG06121" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0V0" /protein_id="CAP26260.1" /translation="MSGSLVDERSIVAKVDMELKKGGTFDKLRKKATEHIKESELLQR IEKETLQKVDEIMESSSNISKEEIQRKLREYISSNHQMRNDINRQTRIELDKSWVQDT LKEEIEEKVTKQLEDMV" CDS join(299322..299575,299618..299681,299953..300007, 302381..302473,302900..302921,303119..303233, 303280..303345,304356..304589) /gene="CBG06122" /locus_tag="CBG_06122" /standard_name="CBG06122" /product="Protein CBG06122" /note="contains similarity to Interpro domains IPR000152 (EGF-type aspartate/asparagine hydroxylation site), IPR001881 (EGF-like calcium-binding), IPR013032 (EGF-like region, conserved site)" /note="Predicted" /db_xref="GOA:A8X0U9" /db_xref="InterPro:IPR000152" /db_xref="InterPro:IPR001881" /db_xref="UniProtKB/TrEMBL:A8X0U9" /protein_id="CAP26259.2" /translation="MVEDRVDEVSVKIGILATYFRVLKKLVAWGMEENGFEHLYPTPE YDFDMNIGEECKKGFEICLDSIISNISEIQPWIMQDNIELDELSLTKMIDNQRLGMEI SASQGALLLRGPFYYRGPFYYGDFMLPDQLSHQGFRAHSILRLSNPTSWFKTFYMGRK DFHFCPDPCCSRIPSVVRTSPKYAPLCKMNQCEKKSTCLMKHFENDDLSKLRLNQFNI NCGCDKPGTIYRPDIGRCVHHNPCTKQSLCRDFGQECVNTATGYKCVCQLGYLKNESN SCAPLKLSPAPYHGFALSESMEDL" CDS complement(join(304872..305048,305082..306838, 306883..307053,307103..307316,307404..307679)) /gene="CBG06123" /locus_tag="CBG_06123" /standard_name="CBG06123" /product="Protein CBG06123" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0U8" /protein_id="CAP26258.2" /translation="MTTTTEMNPSPVPEKIERADSPESASVENSAPKAAVGFDTADQK LRVITADDIADAAEKGDLVDVDGRMLTILEFCDSVESARASCEEHANGMNGMGLSSIR YEHDEDDDTTQETSTSGLEDKDDGMIEMEDAGLGIDNPADGIGALDASAFGGVAFGVV AELQQQIDEMKNTMRDAIAITMNDLQFDMDRLHQKQENLVHLYQKMLGTGRDGRLMAP FSEKYPSKPFDGSHVSARPTGKNPEEIINTHFSDLEKMWANRQAENENYVRNELLSNP LLMGPRAKPKISTTTSAIPSSSSSTSKRVVDTAENGEQEYTFGTNGTQGKRIVNGIVK SVEKLSYPFITREEEEECLEAANGQAPIYAQLLAKLLFVDTIMMYFKDQDTAKRNWLH DAVDYRFPTLDKPTHVSKWKNCSFFINKNMREAVIASGSSMPRAPCGPRGPIGPKDKF KNDQKGSEDVSTNEEEEEDVAVVRTPKPKQTARVNRESSLEGIDWEYLDSDYEKECYE ECRGDQYKYAELMALRLFSTSLTIKFKEQDQVRKEWLRACVEARFPIEDRERNDQRWK ICGQTCNRNRTKVVGADGREERYPYFDQSIEEECFRQSDGQPSLYAELMNAKLFPTTQ HLFFKDQDLGKRNWLHTILDKRFPSTDKVTQTSKWKACTNAINKKLFDGTVTPITKEA LFPNASLKVELDDSKVAVPETPEDTPRSSVARFERRRLPSEAPSVPGSLKRKATEDVE TPVIPAAKRESVRNKQKKEKELYSAYPYVSEEEEVAILESANGNPQVYGRELGRILFA DTIKNYFKFLFFKDQDPDKRQWIHEILDFRFPSKNQLESKQKWKNVTAAINRNMTTAV VSRRSLPR" CDS complement(join(310037..310186,310378..310504, 310985..311106,311308..311478,312455..312526, 312569..312749,312795..312872,312924..313054)) /gene="Cbr-rib-1" /locus_tag="CBG_06125" /standard_name="CBG06125" /product="Protein CBR-RIB-1" /note="C. briggsae CBR-RIB-1 protein; contains similarity to Pfam domain PF03016 Exostosin family contains similarity to Interpro domain IPR004263 (Exostosin-like)" /note="Predicted" /db_xref="GOA:A8X0U7" /db_xref="InterPro:IPR004263" /db_xref="InterPro:IPR040911" /db_xref="UniProtKB/TrEMBL:A8X0U7" /protein_id="CAP26257.2" /translation="MPDCFDFSRCSSSKKLYIHPMEKRFEDSPQSQIYTKILKHYQES DHYTNDPNEACIFLLGIDTTDRDIRSQNYVKNVPDYIDSLDPAVWNNGRNHLIFNFYH GTFPDYDDHNLNFDTGEAMIARASSSDKNFLKGFDISLPLFHENHPFQIESQLDEGHA KNKGSRKYLVSFKGKRYVYGIGSGTRNLVHHLHNGEDIVMVTTCKHNSDWQAYQDDRC QGDNNEYDRWEYDDLLANSTFCLVPRGRRLGSFRFLETLRSGCIPVVISDSWVLPFSE TTDWNSAVIVVAERDALSIPELLMSTSRRRVKELRESAREVYDRHLRSIQVISDHVLK VRADLSEKF" CDS complement(join(314740..314854,314901..315014, 315062..315796,315844..316751,318041..319182, 323435..323603)) /gene="Cbr-srgp-1" /locus_tag="CBG_06126" /standard_name="CBG06126" /product="Protein CBR-SRGP-1" /note="C. briggsae CBR-SRGP-1 protein; contains similarity to Pfam domains PF00620 (RhoGAP domain) , PF00611 (Fes/CIP4, and EFC/F-BAR homology domain) contains similarity to Interpro domains IPR001060 (Fps/Fes/Fer/CIP4 homology), IPR000198 (Rho GTPase-activating protein domain)" /note="Predicted" /db_xref="GOA:A8X0U6" /db_xref="InterPro:IPR000198" /db_xref="InterPro:IPR001060" /db_xref="InterPro:IPR008936" /db_xref="InterPro:IPR027267" /db_xref="InterPro:IPR031160" /db_xref="UniProtKB/TrEMBL:A8X0U6" /protein_id="CAP26256.1" /translation="MTTTSSEGSSGGPHEESSMTLTSSTTVDRRCSQDVRKHSQHKQE KAIAHDLECAAKEFRSKMSDQLKCLGDRTDVQMSSLSELQDYFRKRGEIEIEYASKLE KLSKSIAQKHKSERSRREGWPQHTSSTVWHTLVEQTKEEYKKRQSLGELYGKQITASI EARCEDLAKISKRCREIGSYSHNELNRVLTELQTAMKTYQLCYAEMCGIERKKRSAEE DVKKYEDSNPGKYEGSRRHRALVKHYKRRDEKYEVVRLKCTKARNEYLLCVKAANAAL HRFFAQDLSYLIDCMDLGMDFWLRALLEKVIDERKKITQHEMDSLACLSTLRSSVDVK ADKQKFFEANHQLFMLPKQFEFRPQLGDDIMEVSAEQSLSADLLQRQLQIEKRLEGLQ FEVDEVWKSLEASEKQLLQLYNSQFDCDAGKWRNDLHVTYQYYLKKFEHFLLNGNLME RLEARSTSIGEALAKHGISLKSVSFGSTSERNGSFSIENGAQNHYLLEERRTKVKRIG GIVVKSPDDRPRPKLFGGSLDEYVEATGEEIPLLVQSAIAYLSRYSLRNQGLFRVSGS QSEINRFREAYERGEDLFQYLEDGSDANSAAGVLKLYFRELREPLFPIFMFEQFCDCA KAESPSDFVRRSRELISKLPVSHVLLLRFLFAFLSHLCEFADENMMEPHNLAICFGPT LLPIPEGKDQVFYHNYVNELVRNLIVHADDVFPRDLPGPVYDKYAMQRYMNGNFIEEN DLVSDDDEAHEKISLPQSRHMIGSTYESADRILLSSPILSQANTSTPNGISPSNGAGS STHNDIDYAPVASSRSSNRSKASDSVDMGIRSEMPHRIANELNNIFKNSSLSSDGNNG ISVLRHSHIEPSWSDRREHHNLRSMSTDPDEEREYVSPPPPLTSTQYMSVASCSISPA IKNGAEITERRDSREAMYAPMIKQRATTLPANNGSTTEVNVTGVRPVGKSSLRDQLQL IRKENSTDLKPSTSLNGSLKKTDTETTILDARSTDKSTESSRRTSLEDDRGSEAFSQP DIINSSRPRGKSPTLDDILNSLKVATSISP" assembly_gap 322851..322945 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(328127..328226,328330..328530,328641..328769, 328878..329872,329918..330172,330216..330447, 330496..330956,331007..331888,331937..332164) /gene="Cbr-sec-24.1" /locus_tag="CBG_06129" /standard_name="CBG06129" /product="Protein CBR-SEC-24.1" /note="C. briggsae CBR-SEC-24.1 protein; contains similarity to Pfam domains PF04811 (Sec23/Sec24 trunk domain) , PF04815 (Sec23/Sec24 helical domain) , PF04810 (Sec23/Sec24 zinc finger) , PF00626 (Gelsolin repeat) , PF08033 (Sec23/Sec24 beta-sandwich domain) contains similarity to Interpro domains IPR006900 (Sec23/Sec24, helical domain), IPR012990 (Sec23/Sec24 beta-sandwich), IPR006896 (Sec23/Sec24, trunk domain), IPR006895 (Zinc finger, Sec23/Sec24-type), IPR007123 (Gelsolin domain)" /note="Predicted" /db_xref="GOA:A8X0U5" /db_xref="InterPro:IPR006895" /db_xref="InterPro:IPR006896" /db_xref="InterPro:IPR006900" /db_xref="InterPro:IPR007123" /db_xref="InterPro:IPR012990" /db_xref="InterPro:IPR029006" /db_xref="InterPro:IPR036174" /db_xref="InterPro:IPR036175" /db_xref="InterPro:IPR036180" /db_xref="InterPro:IPR036465" /db_xref="InterPro:IPR041742" /db_xref="UniProtKB/TrEMBL:A8X0U5" /protein_id="CAP26255.2" /translation="MAYQSPQYGQPPGNPQQQFNPNQQFQQNGFPQPGQQKTVQAPGG FPPQPVPQQQPNGGFYQNGAANGTQSYAQPPGPVPQLTQSVQSMSLGPRASPAPQLGQ PAQQMGGYPGAPTAVPPQAQFPGQQTPQFNGPPQNASQISQAPPSNTAPQQAPIPVQN STSSGSSVNQMPTAPSFHGGPPQTGVPGGPGGPGAPQPPHQIQQPASLRPQAPGYPPA PGVPNFQPGVAPSQPTPNNYPGMPQPTPGNYPGAPAAGLQQGPQGNYPGAQPATQQGA PRGFPPGPSPPGAFPPVPGAPSNFPPGGPAMPGAFPPAPQGPSAFPPGASGAYPQGPN VPGQYPQVPGAAGTFPQGPGVPGGFPQAPGAPGMPGMPGGYPGGPPQQRQQRLDPNMM PSAVQVIDEDSARSGIFPTGYPHAELPPLVSTFSFAQDQGNCNPKFMRSTLYTAPQTN DILKASQIPLAVVISPFAPLNEYEVKEPPVVDLGPQGPIRCQRCKAYICPFMEFQDGG RSFRCPFCHARTSVEDAYFAHLDHTGRRTDIEMRPELCLGAYDLVATKQYCKNGLAPK EPAFIFMIDVSYNALSNGMLPILCQNLEKVLRNLPRETGQLESSIRVGLATFDQAVHF FDISSASPKMLVMSDVLEPFVPMVDGLLLPYNDALPGLRAALAEIPKIFAQSKTTETI LQPVVQAGLDALKCADRAGKLIVFSTVLPTFDAPGKLKSKNDRSLLGTDKEKTALVPQ EESYTKLGEQCVKSGVTVDMFLFPNAFIDVATIGQLSAVTGGSVFKFQYFSADKDGVR MLNELERHVSKKIAFDCMARVRTSTGIRPITFSGSFYMENSTDLELATIDESKAFITE IKHDDTLKDQASLIQTAVLYTSMTGQRRLRILNMCLPVTADYNQVYKLADPEALTTFM LKQAVQLNRDRGSSEMKESLSSRCAQFLATYREKCSEGAPLGQLILPESLKLMPLYVN SILKNDAISGGSEMTVDDKVWQMELIRGMRTEDVMPLIYPRVMPVSDLRLNDGEEMEE LPKPVRAGSDFLDNSKAYIIDNGIVLFVWVGALCPQQWIQDVFGVGAANQIDTESGTI PEKDNSHSRALRRAIQCLPRGIRQRKTFVVVEKTGLEPWMKKFLVEDKSGASNMSYVD YLVDIHRKIRDLIS" CDS join(333176..333254,333297..333386,333436..333863, 333912..334462,334506..334710) /gene="CBG06130" /locus_tag="CBG_06130" /standard_name="CBG06130" /product="Protein CBG06130" /note="contains similarity to Pfam domain PF04042 DNA polymerase alpha/epsilon subunit B contains similarity to Interpro domains IPR007185 (DNA polymerase alpha/epsilon, subunit B), IPR024826 (DNA polymerase delta/II small subunit family)" /note="Predicted" /db_xref="GOA:A8X0U4" /db_xref="InterPro:IPR007185" /db_xref="InterPro:IPR024826" /db_xref="InterPro:IPR040663" /db_xref="UniProtKB/TrEMBL:A8X0U4" /protein_id="CAP26254.1" /translation="MAAAWSNTLNYKNVSDRYVLTEEDKKGAFARQYFEIYEARVKEL KPRILDNAERVIGKGKFKHVLLSDAKQDEEIFITGVIVKRVLARPSILKSLLSEDKVA YDNVDDGEDDVKRYAGSSEDRIELESEKQTVRLEGAISMEDCATGCCVGVLGKLGKEG VFHVSRLVWPAANVTKKATTEGTLVFISGLDLSGDIEQDRLTISGLEFMSDWMNTNGE EHQCPSIDRVVMIGPFVETKSNGCDVQSVVRTLTLSRPERQSSAKSLITVDKLISSIS EKLLVNTIDVTPAVGDPCSSMWPLPPIHRVCLPRCGMNEKKVNLVTNPYEFEVDGLRI MTMSGENVTELLRTSHKWSGADVLSNLVKWQHIAPNCPDTLDAFPIAERDPLVMSSTP HVIICGNQPQAEVRRFSVDGTDASCLLVCLPKFSKTRVACFLDLSDLSLKWQNFDHQF " CDS join(334940..335080,335127..335615,335952..336428, 336486..336577,336625..336670) /gene="Cbr-col-128" /locus_tag="CBG_06131" /standard_name="CBG06131" /product="Protein CBR-COL-128" /note="C. briggsae CBR-COL-128 protein; contains similarity to Pfam domain PF01391 Collagen triple helix repeat (20 copies) contains similarity to Interpro domain IPR008160 (Collagen triple helix repeat)" /note="Predicted" /db_xref="GOA:A8X0U3" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/TrEMBL:A8X0U3" /protein_id="CAP26253.1" /translation="MWLYNIAALSISFSCLLIILQILYFPYIISRAESAHSLVMSKVD AFKNLESGIIRELSDYAFLHVARKREIVICEPGYPGLPGANGRDGQPGIDGKNGIRGL DARDIMEEIQANQDCITCPQGERGPTGAPGDRGETGDKGDKGIAGIPGQDGLDGEQGE EGPVGPSGPPGRRGRKGADGKSAMGGFGEPGPKGVPGAKGGPGLQGPRGKRNYIYGPP GPMGQPGPSGLDGVSGNPGERGPKGPPGDRGADIKFCPCPLELELLKVKHSKSVRPSP PSPPFSTMPPTTTTPEPTTTSEQTTRSTTEMVPEVLKEEEDAPEDITVTTTMETITFS SQDEKESIFGSAPGTRSEGVIEEETFSVDDDERQTVGLPKEYENEEPRGPIITEEEDE YADETTTTRRFRYVTKRPIRFE" CDS join(345973..346152,346602..346640) /gene="CBG26310" /locus_tag="CBG_26310" /standard_name="CBG26310" /product="Protein CBG26310" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG83" /protein_id="CAR98913.1" /translation="MDGVHLPKLVNIPITDSSCFHNISRILIQHGPPILDTHLWQVSL FFWFLRDVFSAFPTLQLVSAVVVCSNIL" CDS join(355257..355338,355415..355518,355570..355665, 355979..356113,356160..356255) /gene="CBG06136" /locus_tag="CBG_06136" /standard_name="CBG06136" /product="Protein CBG06136" /note="Predicted" /db_xref="GOA:A8X0U2" /db_xref="UniProtKB/TrEMBL:A8X0U2" /protein_id="CAP26252.2" /translation="MDFFDVRKFQTSHRDFVINDGRLHVVSDYSLIALLPVILVALLI TTIFCVYRFRRWKHNKKQLAELNAFYEIVESSPCLSSGKPYLIQHCSDIEKSECDRIT RAVCVPTQSSIFFQPIPPKAKTVRCNGEVLKAVNASEVIFHFAQLPEIEKTNNNNNNN KKSLHFVHRV" CDS complement(join(356430..356539,356587..356714, 356759..356865,357168..357422,357466..357622, 357670..358085)) /gene="CBG06137" /locus_tag="CBG_06137" /standard_name="CBG06137" /product="Protein CBG06137" /note="contains similarity to Pfam domains PF01170 (Putative RNA methylase family UPF0020) , PF05175 (Methyltransferase small domain) , PF02926 (THUMP domain) , PF08241 (Methyltransferase domain) contains similarity to Interpro domains IPR007848 (Methyltransferase small), IPR004114 (THUMP), IPR000241 (Putative RNA methylase), IPR013216 (Methyltransferase type 11)" /note="Predicted" /db_xref="GOA:A8X0U1" /db_xref="InterPro:IPR000241" /db_xref="InterPro:IPR004114" /db_xref="InterPro:IPR029063" /db_xref="UniProtKB/TrEMBL:A8X0U1" /protein_id="CAP26251.2" /translation="MPKSAHLYAAVITGFEKVASREISEKLPATECISGRGNVRFCLD LNSVPDILKLRSIDNLYVVFYENELVGLTDMEKEEALRTIQEQISYCNWKLAIDVYQL VRETNIYGGSDRVVDQMREFMREGKRCEVTENSPKFRVTCKRCGEKEIHAFSSMDAAS KFGAEINNALGWKCSVKEFDIEVMLRIEKDNMTVMMALNDESLFKRNICAYGPTTMRS TVCYCMLHLANIKPGDVVMDSMCGGGSIPIEGALAWENAFFLGGDNHKLAMERCKKNW SSNSSSTKSICEFFNWDATNLPLRDNCIDALVTDLPFGKKIGLKTDNRLLYPILLNEW KRVLRKGGRLVVMSHDKRSLEKAILADRSSWHIKANHIVNMGGLQCLCLCLINTQS" CDS complement(join(358693..359091,359142..359449, 359499..359980,360029..360995,361496..361862, 361910..362029)) /gene="Cbr-mep-1" /locus_tag="CBG_06138" /standard_name="CBG06138" /product="Protein CBR-MEP-1" /note="C. briggsae CBR-MEP-1 protein; contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR007087 (Zinc finger, C2H2)" /note="Predicted" /db_xref="GOA:Q61SK8" /db_xref="InterPro:IPR013087" /db_xref="UniProtKB/Swiss-Prot:Q61SK8" /protein_id="CAP26250.2" /translation="MVTSDETVLATTTNKTSITTEPMEPKSSDESTDSETDKIKILKA EQREALTEATGSVEVNGNEENGHVECATVDEVAHVEEDKVEEATNSVVDLSSNGSSAT TSVPVEEQEEKANEDETNDVVMETSENGENGKEENGTAMEVAENPAVTENGSKSDGET ETDRVAIKDSQEDDSEPVNGSVKPEEKEEKNDTDAPMEEEDQNGKGVKRPVECIQLDD DDDDIQEVSPPVPAKKQKTEETKQEPKQEAKAEPADDNEQAQIRLLDKLQEYVGDQRG QPCNKTRKVLDTLLGAINAQVQKEPLSVRKLILDKVLVLPNTISFPPSQVCDLLIEHD PEMPLAKVINRMFGEERPKLSDSEKRERQQMKQHNPVSHMTKLLVDIGQDLVQETTYC DIVHAKNLPEIPKNIETYKQVAAQLKPVWETLKRKNEPYKLKMSRCGVCGFQTESKLA MAAHKETLHFTGSKFQCTLCKETDTNEQRMKEHYFEAHLIIAKSEEKESKYPCAICEE DFNFKGVREQHYKQCKKDYIRIRNIMMPKQEDHLYLNRWLWERPPVDPSIIQQQQAAA LQQAEQKKRHQQALLREQHAQAQAAQLLRKQQLQQQQQAQRLREQQAQAQYRQMAQLI QQQQQQQNRNNANNMSNSLIQAMQAQLRRSGTGTSPQNLNLLQKQMAAVLKNQNPAQI QALVASMNKQTQSPKTPTTPKVAKAAATPTLPLAMSASSSSPGVSFQCEICDQTVHEK DKYLSHLQVLHKQMVGKTLQDMTQGAPLACSRCRDRFWTYEGLERHLVMSHGLVTADL LLKAQKKEDGGRCKTCGKQYAFNMLQHLVADHQVKLCSAEIMYSCDVCAFKCSSYQTL EAHLSSTHPKSADKKKEELITLDD" CDS complement(join(365631..365776,365832..365919, 365963..366150,366196..366278,366324..366454)) /gene="Cbr-gfl-1" /locus_tag="CBG_06140" /standard_name="CBG06140" /product="Protein CBR-GFL-1" /note="C. briggsae CBR-GFL-1 protein; contains similarity to Pfam domain PF03366 YEATS family contains similarity to Interpro domain IPR005033 (YEATS)" /note="Predicted" /db_xref="GOA:A8X0T9" /db_xref="InterPro:IPR005033" /db_xref="InterPro:IPR038704" /db_xref="UniProtKB/TrEMBL:A8X0T9" /protein_id="CAP26249.1" /translation="MAEVIERMKKKTLVKPIVYGNTATPLLQKRDSDQHTHQWTVFLK PYLAEDPTKWIRKVQFKLHESYANQTRIIETPPYEVTETGWGEFEIQIRIYFVDNNEK PISVFHYLRLFQPVAELPSGKSVVCTEFYDEIIFQEPTVQMYRALQAGDGKRPDKQAF LNDIEHIKNRTRELGEVAQKEIAAEIEDLRESLKEAHKLIVKYANECNEQE" assembly_gap 366851..366860 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(367604..367801,367852..368022,368067..368223, 368268..368370,368414..368508,368565..368879, 368931..369336,369509..369650) /gene="CBG06141" /locus_tag="CBG_06141" /standard_name="CBG06141" /product="Protein CBG06141" /note="contains similarity to Pfam domain PF01266 FAD dependent oxidoreductase contains similarity to Interpro domain IPR006076 (FAD dependent oxidoreductase)" /note="Predicted" /db_xref="GOA:A8X0T8" /db_xref="InterPro:IPR006076" /db_xref="InterPro:IPR036188" /db_xref="UniProtKB/TrEMBL:A8X0T8" /protein_id="CAP26248.1" /translation="MRSIVLFLQNTRATALVSNRLVHTTAPVSWQKFENERHFEPGED VMKRVWHGLTYDFRRWKRRFQEARKDAFKRRHPVAHMKHGTLDNEVFPYRAEIIIIGG GLTGSSTAFWLKERFRDEDFKVVVVENNDSFTKSSTMLSTGGITQQFSIPEFVDMSLF TTEFLRHAGEHLRILDSEQPDINFFPTGYLRLAKTEEEVETMRSAWKTQIERGAKVQL LSKSELAERYPYMNVDDVLLASLGVENEGTIDTWQLLSAIREKNITLGVQYVKGEVEG FQFERNRASSEVHAFGDDVTADANKLRAQRVSGVIVRPQMNDASARPIRAHLIVNAAG PWAGQVAKMAGIGKGTGLLAVPVPVQPRKRDVFVVFAPDVPADLPFIVDPSTGVFCRQ SDSGHTFLVGRTPSKEEDSQRKHDNLDVDYDDFYQKIWPVLVDRVPGFQTAKVKSAWS GYQDINTFDDAPVIGEHPLYTNLHMMCGFGERGVMHSMAAARAYAERIFDGAYINVNL RKFDMRRIVKMDPITEPCRL" CDS join(375845..375942,376028..376205) /gene="CBG06142" /locus_tag="CBG_06142" /standard_name="CBG06142" /product="Protein CBG06142" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0T7" /protein_id="CAP26247.1" /translation="MSTQLTFLLILCVLTTSAALVQFPRSNRYGFISSYDEPSRDTMI VEHKRYDRNCFFSPVQCMLSYNDVPLVVTRKASKRFDPLLASLNNFK" CDS complement(join(376688..377076,377124..377372, 379342..379578,379642..379783,379852..380007, 380462..380604,380681..380851,380962..381067, 381117..381149,381196..381304,381838..381941, 382013..382137,382193..382325,382372..382422)) /gene="Cbr-twk-25" /locus_tag="CBG_06143" /standard_name="CBG06143" /product="Protein CBR-TWK-25" /note="C. briggsae CBR-TWK-25 protein; contains similarity to Pfam domain PF07885 Ion channel contains similarity to Interpro domains IPR003280 (Two pore domain potassium channel), IPR013099 (Ion transport 2)" /note="Predicted" /db_xref="GOA:A8X0T6" /db_xref="InterPro:IPR003280" /db_xref="InterPro:IPR013099" /db_xref="UniProtKB/TrEMBL:A8X0T6" /protein_id="CAP26246.2" /translation="MPVVELCPSQFELNRMADNPHLYSGPSVSNESIQMPRSPTQPLR GTQVFLKEFKRTKLQPEDSIIEETESCSSMSSKSSEESASDTIMVPPDPEKENVPEKI LLTDPSTVLQNVKFQRKSAEAEDAVSVKRNTKSQRSCRIRTGSESEDLKKPIKSILRQ SPYISKEDVSQSNESTIHRQFRKSRTSSLTKRDSVNNDRTEPGNHDAIDNYYAKNYYT VTGIYQKNPSFPKYYVNGNADEDNEENHEAVRRNYEKHGKLTLSMAQSTRSMPIVPVN NRFHKSFYWFAHNHKKIGFRHVCMLLLVLSYTLLGAALFFSIESRHEHETMQIHKRKL ERVIYEIAQTLELEILDPMKLTNITQMEYFITVNKQLPLLFNLRAYVKLLNAEDLYSG STFYKHEDPKNLKWTYGSAFFFSMNVYTTTGYGSIAPASSLGKALVILYGLIFVPLTA VVIRDLGQWALLYLTKMYTILIDNFRRVRGFVDKLDEDEIISLPIKFSVSVMIFYLLS ATMFIYEYDELSGPPDSGISFFHAFYFSFISMSTIGLGDIMPNNVTFSPLITIMFFFG MPILKVVNRVTYICLENGVFGTMTVLENRLDTIWSSATVIPTGQSPQEQQSQPNSVSR KTSMISDGMVPDEVSFRLNLNILLNFYTQTDGSVPNEYLNNFTIRSIATFMKANGDVY GGAFGRVNMRRGDLRNLTDNQATDNRSNRDNNV" CDS join(388407..388497,388638..388727,392521..392543) /gene="CBG26309" /locus_tag="CBG_26309" /standard_name="CBG26309" /product="Protein CBG26309" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG82" /protein_id="CAR98912.1" /translation="MSVTVEIVDEDSGEIQVAEKRTEIEDVKPNANALEDNVVSSDET TTTIGNKIENAPVKEKDRKNLDI" CDS join(395508..395559,396658..396914,396930..396983, 397019..397224,397271..397560,397614..397789, 397838..398026) /gene="Cbr-sms-1" /locus_tag="CBG_06147" /standard_name="CBG06147" /product="Protein CBR-SMS-1" /note="C. briggsae CBR-SMS-1 protein ;" /note="Predicted" /db_xref="GOA:A8X0T5" /db_xref="InterPro:IPR025749" /db_xref="UniProtKB/TrEMBL:A8X0T5" /protein_id="CAP26245.2" /translation="MVWNSPPYQYTNYGSINDEHGEQEEGSESAAETVEKQHDDEEKE EETSDGGVASSRSNHQKKQNEEKKSREKMDDEDIITIARSSRRICGSAASSSDSETAD DKKDLHTPYDWICLATNRPTLVAFLMLVVAAAGNTITLSWIHERYPLTAPLPDIVFEL TTKIPWGLRLCENLMIGSFASLLVLILFHRHRWIVLRRLCFIGSILYGMRCITMMVTP VPKADEDFQCSPRLGENATFSLIVMRGIWSMFGLGLNLFDNQKVVLCGDYIYSGHTLV LVVSALFIGEYSPRRFYILHWLSWLVCAVGVVFLVLSHGHYTIDVILSYFACTRVFWA YHTQAAHPSIRLSVQNHQAKEFWFPMLRWFEGDIRRPVPRRFDCPISYSQVCNAFRRV RPRGSRTGSARPAFE" CDS complement(join(399011..399156,399286..399367, 399415..399673,399746..399905,399954..400227, 400271..400477,400673..400777)) /gene="CBG06148" /locus_tag="CBG_06148" /standard_name="CBG06148" /product="Protein CBG06148" /note="contains similarity to Pfam domain PF08743 Nse4 contains similarity to Interpro domain IPR014854 (Nse4)" /note="Predicted" /db_xref="GOA:A8X0T4" /db_xref="InterPro:IPR014854" /db_xref="InterPro:IPR027786" /db_xref="UniProtKB/TrEMBL:A8X0T4" /protein_id="CAP26244.2" /translation="MDGDQRRKTTTKETEDLCNQPVSSSEFFHSFCFGFISAENIEKL RNRREKPVSEKCRDNHVVSSKLKKHVTELSHIRKSEAVDIRIQKINSSIETLKEQSKP LKKAMNTGLYSIDSDLIELVALTARETLLEIGSSAAVDPVDVGLKVADALKRINSAVK HYKPDKTDWCNEWLYDENMDEIDEIYNGIYGDSGLSENCRLASNLAVFHRCGREMQMY PSASADTNTDQEQDVYINPALYPFNVDCDFILQLVDVECAEKLKKVREKTERGSRKKE TGELVKVNDKASNVQSEEVSISNELKHVSNIFRKEIKTRKTDKIPYFEFVINPESFSR TVENMFYVSYLMRDRTLFLVEENGAPYLQKPPFATEEEQKQAENRNSTHGVTSLSFEE WKLLCGGFKKTIIQPLKV" CDS join(401561..401872,401921..402085) /gene="Cbr-mbf-1" /locus_tag="CBG_06149" /standard_name="CBG06149" /product="Protein CBR-MBF-1" /note="C. briggsae CBR-MBF-1 protein; contains similarity to Pfam domains PF01381 (Helix-turn-helix) , PF08523 (Multiprotein bridging factor 1) contains similarity to Interpro domains IPR013729 (Multiprotein bridging factor 1, N-terminal), IPR001387 (Helix-turn-helix type 3)" /note="Predicted" /db_xref="GOA:A8X0T3" /db_xref="InterPro:IPR001387" /db_xref="InterPro:IPR010982" /db_xref="InterPro:IPR013729" /db_xref="UniProtKB/TrEMBL:A8X0T3" /protein_id="CAP26243.1" /translation="MSKYGCPTSDCDPNVVTMITKRGPVNKTLKSASQLNAAQRSGAE ISTEKKTMSGGNRQHTANKNTLRLDEETEELHHEKVALSLGKVMQQARATKGWTQKDL STQINEKPQVVGEYESGKAVPNQQILAKMERALGVKLRGKDIGKPFGAKPAAAAKK" CDS join(402488..402568,402644..402937,403278..403994, 404043..404831,404878..405880,405929..406307, 406644..407040) /gene="CBG06150" /locus_tag="CBG_06150" /standard_name="CBG06150" /product="Protein CBG06150" /note="contains similarity to Pfam domains PF12710 (haloacid dehalogenase-like hydrolase) , PF00122 (E1-E2 ATPase) , PF00702 (haloacid dehalogenase-like hydrolase) contains similarity to Interpro domains IPR008250 (ATPase, P-type, ATPase-associated domain), IPR006544 (ATPase, P-type, unknown pump specificity (type V)), IPR001757 (ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter), IPR018303 (ATPase, P-type phosphorylation site), IPR020592 (Ribosomal protein S16, conserved site), IPR005834 (Haloacid dehalogenase-like hydrolase)" /note="Predicted" /db_xref="GOA:A8X0T2" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR006544" /db_xref="InterPro:IPR008250" /db_xref="InterPro:IPR018303" /db_xref="InterPro:IPR023214" /db_xref="InterPro:IPR023298" /db_xref="InterPro:IPR023299" /db_xref="InterPro:IPR036412" /db_xref="UniProtKB/TrEMBL:A8X0T2" /protein_id="CAP26242.2" /translation="MGVDQLVESITPYNLRPIAAHLYVPPFPENRPSFHLSTFTVITS IWTYAWLTNFGYDEYYELGMVGYAVIFVLLALVLLFCHWLMPVRCFFMCSEQSDVRKS SHVCVQPTQNNGWPELVLLNRTKRDQQTKLWFEFQRVHYTWEEETGSFQTKTLDISKP MEFFQKNFGFETEDQVKEAKYLLGDNKTEMVVPQFLEMFIERATAPFFVFQVFCVGLW CLEDMWYYSLFTLFMLMTFEATLVKQQMKNMSEIRNMGNKTYMISVLRGKKWMKIKTE ELVAGDIVSIGRGGEDECVPCDLLLLRGPCIVDESMLTGESVPQMKEPIEDVEKSKVF DIDNDSRLHVIFGGTKIVQHTAPGKAAEGMVKSPDGNCICYVIRTGFNTSQGKLLRTI MFGVKKATANNLETFCFILFLLIFAIAAAAYLWIKGSVDETRSKYKLFLECTLILTSV IPPELPIELSLAVNSSLMALQKLGIFCTEPFRIPFAGKVDICCFDKTGTLTTDNLVVE GVALNNQKEGMIRKVEDLPLQSLQVLASCHSLVRFDEDLVGDPLEKACLSWCDWILTK GDAVMPPKSQKGITGIKIFHRYHFSSALKRMTVVAGYQASGTADTVFISAVKGAPEVL RNMYTELPADYDETYMRLTRQGARVLAMGTRKLGETRVGELREKKRESFENDLTFAGF VVISCPLKTDTKSMIREIIDSSHAVVMITGDNPLTACHVAKVLKFTKKYSQTLVLDEP ENGVDWIWKSVDGTIELPLKPKTTNKLERKAFFTSHEFCLTGSAFHNLVHNEHTFLRE LILHVKVFARMAPKQKERVINELKSLGKVTLMCGDGTNDVGALKHSNVGVALLTNPYD ADKAAELEKERKAKIEEAKSLVRSGATIPPRANSPGSPPPPNQSRRDAPPGARARTAP SPMNNPAQARLESLMKELEDEEKAMVIKLGDASIAAPFTSKYTSIASICHVIKQGRCT LVTTLQMFKILALNALVSAYSLSALYLDGVKFSDTQATIQGLLLAACFLFISKSKVCD QTTFPFISEFQPLKTLSRQRPMANIFNAYTLLTVTLQFIVHFSCLLYIVGLAHEADPK VGPADLEAKFTPNILNTTVYIISMALQVCTFAVNYRGRPFMESLFENKAMLYSIMFSG SAVFTLASGQATDLMNQFELVVLPEQVSSIFRIFINSRFLFQLRNALLMCVSADLVMC YLIDRGLNFFLGDMF" CDS complement(join(407353..407493,407537..407612, 407659..407777,407822..407911,407957..408226, 408270..408477,408524..409194,409315..409408, 409453..409542,409593..409711)) /gene="Cbr-wht-2" /locus_tag="CBG_06151" /standard_name="CBG06151" /product="Protein CBR-WHT-2" /note="C. briggsae CBR-WHT-2 protein; contains similarity to Pfam domains PF00005 (ABC transporter) , PF01061 (ABC-2 type transporter) contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR017871 (ABC transporter, conserved site), IPR003593 (ATPase, AAA+ type, core), IPR013525 (ABC-2 type transporter)" /note="Predicted" /db_xref="GOA:A8X0T1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR013525" /db_xref="InterPro:IPR017871" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8X0T1" /protein_id="CAP26241.2" /translation="MATETCSLLSVGQSEYGAAPSMISALEAVDPVTLTWHNISIQAR KSGKRILENVSGIAKPGQLLALMGASGAGKTTLLNMLLSRNLKGLDTNGSVKVNGHEL GRRITAISGYAQQDELFVGTLTVKEYLDIQAKLRVNGDADKRRRRVANVMSQLGLYKC QNTRIGAIGGQKGISGGEMRRLTFACELLSNPSVLFCDEPTTGLDSFMAESVVQVLST LAKSGRTVICTIHQPSSQLYLMFDRVMFMAGGKTAFLGSPKDAIQVETRLIRSISNDF FQFFEDAGFTCPRNFNPADLIIHTLAVMPNEEDKCRQRIEVICTKFQNSSYGRTLKIG VEKTDEGQRPSERRKTGILTQIGALLQRSAIDTWRNPSLTRAKVIQKSIMGLFVGLLY LQSPLTSIGISNLNGALFYLVCELTYSTIFGILNFLPTDFPLVSREYHDGLYSVFSYY VARCLSYLPLFTADGLIMLLVSYWLVGFSNSLVQVLFACLIAFLIEQSSSACGIMISC ISPSLPIAMSTAGPLLTLLSLTGGLYANVGALPSYISWIQYLSWFRYGFEAFAINQWS SVNEPNSTIWTEAKRDSVLSQLSFHADMFYPDLVIMSAFILVFYSIGYLGLAYRVSKA R" CDS join(410924..411155,411986..412158,412205..412465) /gene="CBG06152" /locus_tag="CBG_06152" /standard_name="CBG06152" /product="Protein CBG06152" /note="Predicted" /db_xref="GOA:A8X0T0" /db_xref="UniProtKB/TrEMBL:A8X0T0" /protein_id="CAP26240.1" /translation="MSSSFSTDFDASNMLKPSSSQMFGPIDIHLPRKDSRHHHHMRNL RARLAPERLCFGTMRPQTAAYLICIAALHEITFGTFLVFASDYGEKESWYHSAQWLVI LTCRLLQYPSCLIALFGIRNNNPALIVPFMLSQVSLGSYADLHTYIQMVSKCAPSAPL PTTSPIVLIVIPILVYAGILMFFIYNMYMVVKCITVIRGDIGRGLEGPQPSERSINDD LFL" CDS complement(join(412571..412657,412700..413000, 413958..414173,414271..414407,414700..414783, 415128..415280,415694..415849)) /gene="Cbr-npr-3" /locus_tag="CBG_06153" /standard_name="CBG06153" /product="Protein CBR-NPR-3" /note="C. briggsae CBR-NPR-3 protein; contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domain IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8X0S9" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8X0S9" /protein_id="CAP26239.1" /translation="MEGRNCVTVQEYQPEYNDMNEIRAIFSVLYLIVWVAAIVGNTLV LYVLTFNQVSLSVRTVFVGCLAGSDLLMCLFSLPITAISIFSRVWVFPSIFCKLIGVF QGGTIFVSSFTLTVIALDRCVLILRPNQEIVNFPRAVFIVFCIWLLGYCLALPVGIYS NITVYEEICGTFCEENWPDFNQDTGRSGIRRAYGLSVLVLQFGIPAFISSICYWMISQ VMSSQLERRRGHNIRPESEEKLVNRKNRANRMMIVMVVGFVLAWMPFNAVNLYRDLFG ISTTKWYSTVFALCHVCAMCSAVLNPIIYSWFNPQFRTSITTLFKGNNDEARLIKKKP SSTSKMVAYPNNFSEVRKDTEIQSNKTKISIAENDYRAGDQLL" CDS complement(join(426542..426863,427004..427281, 427320..428141,428186..428824,428952..429103, 429150..429387,429435..429573,429621..429773, 429824..430761,431485..431761,431810..431988, 432181..432328,433091..433490,433735..434020, 437235..437357,439521..440022,443007..443062)) /gene="Cbr-kin-4" /locus_tag="CBG_06155" /standard_name="CBG06155" /product="Protein CBR-KIN-4" /note="C. briggsae CBR-KIN-4 protein; contains similarity to Pfam domains PF08926 (Domain of unknown function (DUF1908)) (2), PF00595 (PDZ domain (Also known as DHR or GLGF)) , PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR015022 (Microtubule-associated serine/threonine-protein kinase, domain), IPR000719 (Protein kinase, catalytic domain), IPR001478 (PDZ/DHR/GLGF), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8X0S8" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR015022" /db_xref="InterPro:IPR023142" /db_xref="InterPro:IPR036034" /db_xref="InterPro:IPR037711" /db_xref="InterPro:IPR041489" /db_xref="UniProtKB/TrEMBL:A8X0S8" /protein_id="CAP26238.2" /translation="MLNFGVVMEKKKVKNGCKKPKSTLHPHRRFSMQPTPSYTYRTSL SPQRSPRLKRLSEQLSHIRISLDPPSPPFLSPSPLGDIRENEEPRMHYLQVPGGGSDE NSPEFRGGGAFLFGNSFASRFLSSPPPDRRTSFASTMSDTNSSITIPMSSSYQNLLSP MWSTMKYSSDDNETPPNEPSPRRSKSSNRSSSDCINVPPIVFSPVLSRPIRSISPTMS MSPTFRTHHNSDSESDTGAPVAGAALFASSSASGLIWKGSGNLMIPPRRSFHRPQSGG GGNDSSDSNSVGNVERLLKRNRRRTMAIHGEISEKLDLINIQSAISCGVETESGQTAA STGWSSASMTNLCRIRSSLGHSDPQLSSSSTNSFNTSTSSLHPPTKSSTTALSSFSPS SANRSPGNHRPSLHSSTSPVTLQRCRSPMRVPQRSTSSSHNFGAGGAGPSSSGSSVHS GAITLRTYSARNGSSLMAPVQDTRRWSLASLPSTSGYGTPGTGSNSGVSVSYTLSSQY SSSEQIGEMLEQTRISGPVRQNSSRFDSNDSYDDMASQQQAAAQNAFLNRPRSRSLTS PMKFLNEYNIEMVNRTSVYKERFPRAKLQMEERLNTFVAENGPLSGGISQQSGRDEAD SNDDMVTKQSGSGSGLKPKDSVEEAVMRSRRSTVLEAESYADRSLLRLIGDGATRFLH HQIVEIALDCLGKSKDDLITCSYFCEMSQRLEETLNEAQMKTSPESLEYLSKLVKKLL MIVSRPARLLECLEFDPDEFYHLLEEAEGVVREQLGSGTARVPDLPQYIIGKLGLDRD PLMDSTDHVDTSEDTAPTTSSASGPKGPGGTWQESNRAPSEDDFDTIRLVSNGAYGAV YLVRHRETRQRFALKKMNKQTLMLRNQVDQVFAERDILTMADNPFVVSFYGSFETRQY LCMLMEYVEGGDCAALLKSAGTLPVELARLYVAETILAIEYLHSYGIVHRDLKPDNLL ITAMGHIKLTDFGLSKIGLMNRTTLVAEGYDAVAETQQFQDKQLCGTPEYIAPEVILR RGYGKPVDWWALGIILYEFLVGIVPFFGETPEALFSKVISEDVEYPEEDEALPPEAED LCRRLLEKNPAERLGTVNGAAQLMAHAFFILLDFTSLLRQKAEFVPQLDNEEDTSYFD TRTDRYNHEAESCGEEEVGGSSAASSMMFHSFSTASPRHSIVSIDPAHLPHLLSTAAA AKEIERSHSVSMSSRSEVRPERSYSTGQAPPDLFNISDDHTSTVSCATSISLISFISQ AVNLRRRFSAQRHNVSTTSSSGTGSGTCFATAASSTDSSIDASTLPIFQPPSRASIAE RGSRSPLPKFSISCEGEAGAATKDNKDDEDLKNCTIDSNASSDAGADETVRFRRQSSG RSPAAQLQLVIPSISSSQTTQNVEPAKETCYVMYPSGPFTSAGSQLSPGGASVSSASS SNDIGSPHLTQQDNPLTQDGSIASSSTQSKTITIRKGPFGFGFTLKSVRVYLGEHSEY YTIEHIVTAVVDGSPAFEAQLQADDMITHVNGHPVHNLTHPQLMHRLLSNGNELILRL VPLTSTSIREGAARRTIGKMARKKPKRPQRRVVPLEKKARKPSALLRRLSGKRATNDI VPGSSSQKQAFMPRSASSQDGSILTHLPGTSKPLPEMQAPQETSTSSQGMVRRSVNEI EVSVHYPHNTSPHHHVANRPSSLRSTSSYHQHHHPSSSSSVTSAPAAIPSSSSSNAPR MVSSSPSSSASNSGTSSPAALSSSTASSISAVKQKSQSIAVSPLARDTRMRSPSPSHH LHQRPSSSTYTTRLDGGATPTASASLSSSGFVPDLTSSRNSPNLSARRRSYQPTTTTS MIVPPTTHHSRGFSAAAQSAQNLLNRLLPRQENNDRSGSGS" assembly_gap 437689..438410 /estimated_length=722 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(444891..445061,445108..445204,445534..445652, 445698..445840,445884..445971) /gene="Cbr-clec-171" /locus_tag="CBG_06158" /standard_name="CBG06158" /product="Protein CBR-CLEC-171" /note="C. briggsae CBR-CLEC-171 protein ;" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0S6" /protein_id="CAP26236.2" /translation="MAWNSNDSCTMYNFNSMSPVVKGSSKNGSVVAFKVTSPENQCPV GLNPPTFDNQNATGRLYVNNYPPSFPYYVNYTMYFDNGIWKMSYIHKGQELRKLTKSK DIYARIDGVRYTTCRSNPKTADCRSPKGFKFTGRTISNFNNYKWVSNSSAMATKNDNC LVMVFKGTGSVKIDVRGCPYDTAPLKTQLVFCSRRAWSFPDLHFN" CDS join(446384..446431,446475..446603,446653..446823, 446890..446983,447033..447103,447152..447269, 447315..447433,447476..447624,448594..448720, 448835..448931,448975..449045,449425..449685) /gene="CBG06159" /locus_tag="CBG_06159" /standard_name="CBG06159" /product="Protein CBG06159" /note="contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domain IPR006583 (PAN-3 domain)" /note="Predicted" /db_xref="InterPro:IPR006583" /db_xref="UniProtKB/TrEMBL:A8X0S5" /protein_id="CAP26235.2" /translation="MLNFLNILLAATVKYVNSDNTMVIVWGKPTSFYNPTPYVNTTLN WIQCVQECYNFERCVLAYQNSTGCNLYVFNGMPSVKKTNSTQDFQVAFKVQGFADTCP VGTNPPTFNNKNASGYLYVTDNVYYPQKVWYNISLSGSSWKLTYTTSSLCPSNYNTYV TYADGRQNCVIILWSNMTVGGYQNVSDTTCKQFGGTLPTLNFPIDVDVFTYLANLYRN NFASSEFYIRIDGVRTKSCQSNPNSTECLTPEGFTFTDPSFLNSFQQYDWVTNAGAKE ESDDNCLVLVYPNTTKFMQVDVRSAAIDVTKTNATDGSIVAFKVDTEDRKCPSGANPP TFDNQNATGSLNVDYDTNFFPKCVYYTIYEKGNTWQISYTLNNSCTSDFIDIVERSDG TSICVTGFTFTGPPVENFENYNWVTDPSAQETPDDNCIILVANGSNPIQMDVRRYTNG SEVQKLIHLQLLVYWISIANKAHILFLSSMDILK" CDS join(450411..450560,450794..450932,450977..451088, 451150..451305,451357..451711,451759..451871, 451922..452105) /gene="CBG06160" /locus_tag="CBG_06160" /standard_name="CBG06160" /product="Protein CBG06160" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0S4" /protein_id="CAP26234.1" /translation="MAVPRRPNVQSMRKLLDAKTENEKEVESKDSSVPSLAEICLSSI STTLFRNKIRWRKLTDLAFEYRYVSEDRNIPKPIQNILCESMDDVLAEAKRWNAKHLE MFVEPAKSRRRVLPKSELLRTFYPELVWKRHSCEIDDVATCLHLIKTECKNWPLMQFQ FACLYARTELIYDDWKFDNYRLSCFRKQVGDHPVYDFWLTMMATINKDRHFFGSSIRL PNQKVAQCFLFAIRNGYLQLVEYIWGQLTDSHREAIGMIEWRNMCYRTRDGEAISFLC KHLCRMNPVGTCRNAWQPFFDAFQHLVHDEKSDHLERNQYRRKFEFLLKHCCPILRTR LVKFHHFRLICDAFRYNEHEIFSLLLQNMSPDDIASAREHIDRIFDRNKTKTGDRLRR TLMRRQQTIQ" CDS join(452833..453068,453116..453458,453502..453735, 453779..453971,454016..454083,454190..454275, 455076..455330,455379..455721,455893..456015) /gene="Cbr-srh-27" /locus_tag="CBG_06161" /standard_name="CBG06161" /product="Protein CBR-SRH-27" /note="C. briggsae CBR-SRH-27 protein; contains similarity to Pfam domains PF10327 (Serpentine type 7TM GPCR chemoreceptor Sri) , PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) (2)contains similarity to Interpro domains IPR019429 (7TM GPCR, serpentine chemoreceptor class i (Sri)), IPR019422 (7TM GPCR, serpentine receptor class h (Srh))" /note="Predicted" /db_xref="GOA:A8X0S3" /db_xref="InterPro:IPR019422" /db_xref="UniProtKB/TrEMBL:A8X0S3" /protein_id="CAP26233.1" /translation="MASQFLSFSKTNYQFLPDNESYYEFYKEQEELNGYYKTLCHFTP FFTIPIYAEAFYCIVYKCKQFSPKYVQLLTVHTFLHLFAEVYWTVLLLPCVNLPTIGV SAEGFLSVLKVSASWQIFFMCGLLQIGTATMIHLLIYRLKFAVPSHAANSQCVKFSAV AANLFYYCTAILCTCALGFMDEDQLVAKNRILKKYLVPHPNLWDVRFVSTDKENPTFL YYLYITVGEITILIINIIAVPTISFHYLSANRTEKSDRLARAHRQTLQVLVFQLAIHC LFHLLPLICFTISAIFRIKNVFVLSVGAYIWALHGAACTLALILANKPFRITVKEHLK YVFCCLCCEPATKQPSIGLRRESTQMLDTCTHMYPYLGHRFQCCCIKAIVVEGPSVSC FFLRRIFLLLLMASSFLPDNESYYEFYKEQEELNGYYKTLCHFTPFFTIPIYAEAFYC IVYKCKQFNSKYVQILKVHTFLHFLAEIYWTVLLLPVICLRSIGVSAEGFLSVLKVSA SWQIFVMCGLLQISTATMIHLLIYRLKFAVPPDAANSQCVKFSADSANFLYYCTAIFC TCAFGLMDEDQLVAKNRILKQFRPFDFIISQRIEQKSLINWPELTGKHYKFWFSRYQK RK" CDS join(456623..456828,456874..457216,457619..457852, 457897..458071,458115..458212) /gene="CBG06162" /locus_tag="CBG_06162" /standard_name="CBG06162" /product="Protein CBG06162" /note="contains similarity to Pfam domains PF10327 (Serpentine type 7TM GPCR chemoreceptor Sri) , PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh) contains similarity to Interpro domains IPR019429 (7TM GPCR, serpentine chemoreceptor class i (Sri)), IPR019422 (7TM GPCR, serpentine receptor class h (Srh))" /note="Predicted" /db_xref="GOA:A8X0S2" /db_xref="InterPro:IPR019422" /db_xref="UniProtKB/TrEMBL:A8X0S2" /protein_id="CAP26232.2" /translation="MSENFLPDNRSYYTFYKEQTTWNNYYKYACHFIPLFTVPIYAEA LYCILYKCKPLSPKYVAMLQLNMFFHFLGEVFWSTMLVPVIVLPCVGLSVEGLWSVLH IPGKYQIFIVVAILQFNTATITHLLIYRLKFAIPPDAKYRKYVKLSADVAKIFIYFTV IFCTCAFSLLNEDQGSLKNRIMQKFLVPPPNLWDDRYVLTDRDRANFQLFLYITIGEI VVFVANIIIIPIIAFHYLSAHRTEKSDRLAKAHKKTLQVLIFQLAIYCLFHLLPMVCL TCSAISEARNVIFLSLGMLIWALHGSAYTLTLILANKPLHLEYVFCCILCNFSPKTPN IGRRRESSVIQKIDFPT" CDS complement(join(458390..458486,458530..458645, 458695..459129)) /gene="CBG06163" /locus_tag="CBG_06163" /standard_name="CBG06163" /product="Protein CBG06163" /note="contains similarity to Pfam domain PF00188 Cysteine-rich secretory protein family contains similarity to Interpro domains IPR014044 (CAP domain), IPR001283 (Allergen V5/Tpx-1-related)" /note="Predicted" /db_xref="GOA:A8X0S1" /db_xref="InterPro:IPR001283" /db_xref="InterPro:IPR014044" /db_xref="InterPro:IPR035940" /db_xref="UniProtKB/TrEMBL:A8X0S1" /protein_id="CAP26231.2" /translation="MRISVQKERKKYWIIIMISGSISASIHFCKFLTFFKTVRSQLAL GNFVTKRHTKRAAGSNIRRFEWNNTLEKSADSFARTNPSKHSNINDIGENLFWHWSTK PGDFNNYGSLAAGSWIHEFHEKYWDSNILTNDLFGSGVGHATQMVWADTYQIGCSVAT FKDIHKKTGRPITKICVVCHYWPKGNYLNEPIYLEGQPCSKCESKKCDKKTGLCI" CDS complement(459747..460028) /gene="CBG26308" /locus_tag="CBG_26308" /standard_name="CBG26308" /product="Protein CBG26308" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG81" /protein_id="CAR98911.1" /translation="MRILIPLIFLLAMALQMEACIIPPCPADDDFPRPKVNRTTTKYP RGSGIHQHGTKCISHDDCRHIKMELEVPYCKNGVCKNYRYNPQPNGWHH" CDS complement(join(461003..461138,461186..461281, 461325..461652,462458..462685,462738..462837, 462890..462997)) /gene="CBG06165" /locus_tag="CBG_06165" /standard_name="CBG06165" /product="Protein CBG06165" /note="contains similarity to Interpro domain IPR013032 (EGF-like region, conserved site)" /note="Predicted" /db_xref="GOA:A8X0S0" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR013032" /db_xref="UniProtKB/TrEMBL:A8X0S0" /protein_id="CAP26230.2" /translation="MRSNSSSRLWVGPLMLVIIIALIYLLSLMPTTPPHLANNGMMVN DAHTEYAMKGQAQVDWQEIYKNPSSDEIITGFDPCRHGGMTNETDGSCLCTRWYTGDK CETPVCMNDGYFNFTLGRCVCTSNWVGEHCIFRCNSGVVNKTSGLCECLFGRPCTIQK CINGHFFDGKCVCYDGFTGPACTICDGSVPSMQCDEVIRKRGSVNSRLTLSGLSFCII TIGLLCVGAHRRRSAMNPVAEETWYRVFHPNNNRPFRCRHDYMCGGSWVPRDRALIVA PGRVSMSSTTPRVHRLATPPPSYTSVDDLNTTESQNPPTYEEATRIEIESVVAEK" CDS 465420..465440 /gene="CBG26307" /locus_tag="CBG_26307" /standard_name="CBG26307" /product="Protein CBG26307" /note="Predicted" /protein_id="CAR98910.1" /translation="MVGTYF" assembly_gap 465552..465561 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(469795..469884,470029..470105, 471185..471353,471423..471553,471600..471754, 471967..472049,472376..472474,473691..473879)) /gene="Cbr-lips-5" /locus_tag="CBG_06167" /standard_name="CBG06167" /product="Protein CBR-LIPS-5" /note="C. briggsae CBR-LIPS-5 protein; contains similarity to Pfam domain PF01674 Lipase (class 2) contains similarity to Interpro domain IPR002918 (Lipase, class 2)" /note="Predicted" /db_xref="GOA:A8X0R9" /db_xref="InterPro:IPR002918" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8X0R9" /protein_id="CAP26229.2" /translation="MLFSSSILLLLSTVFSQDIPQYGPISAHFDSWLDRNGYEKYEYA RLDLGTAGSFGGMSSEMQYFDTTKDPVIFFHGNSDAALTANNFSTGWTSTVEYFLNQG YTLAHLYGTSWGNTNTTAAVERDHDCVTVFRLRKFVEAVMDYTGAKQINIISHSMGVT LARKVILGGYINADDGSCNIGKPLGTKVRAILGIAGANFGLCACVGHWLGVVWPTCND DNGLWPGETCYPTRMDGMCATSPLPYPCNGLTYSKFLMDLNNSRFKPAQHIFSMWSMG DDLIGDGNMVWGRPTSEIPMSDGNKIYKNYSHMETKLNTAADQFHIITQLNIPA" CDS join(478789..478902,478946..479085,479167..479267, 479319..479411,479458..479601,479656..479792, 480137..480255,480299..480405,480457..480663, 480713..481048,481097..481303,481749..481900, 481945..482072,482115..482242,482311..482386, 483218..483348,483585..483691,484581..484696, 485368..485632,485676..486002) /gene="Cbr-lpr-2" /locus_tag="CBG_06168" /standard_name="CBG06168" /product="Protein CBR-LPR-2" /note="C. briggsae CBR-LPR-2 protein; contains similarity to Interpro domain IPR022272 (Lipocalin conserved site)" /note="Predicted" /db_xref="GOA:A8X0R8" /db_xref="InterPro:IPR002449" /db_xref="InterPro:IPR012674" /db_xref="InterPro:IPR022272" /db_xref="UniProtKB/TrEMBL:A8X0R8" /protein_id="CAP26228.2" /translation="MTSFAHILSIFLLILITLESVFAFCYPKIPLLDLQPAQYNGSWF VIARKPSASRYFLPKDINSSMISLILNKDAFSLSFSEYHTVNATCQSLTGNMTKHKGG YMLEVKQAVGTNYVEKIFFRPIYHGYSGEQNEEMNMVLYGCLDGNDNGGCKIGDELVL IMSNSRHPQTLQLYKSAQVIEDEACIDILHFTALDTYTECGDEMVDEDQKLRHAKIDE DNEFVDVECRVENIRPANNNISNFFNEPRVLTVVAYIDASLSGEQIAHISCRYDSETT AECEWIRQDTCFKTNLTQTLSTNQIQISSSILKINGSIVPIDWSGFVLWENGDEYISM HCGLVDDDGACDSVRVYVWSDEDHMDQPTINEIYRELQKVCIDPTDLIFLNTFHECII PSPTPSLLHCQSPNGWSPITLSMLHGVWYIAADLNADPKMFLQSTVINMRRIQNSSDL ELIYYAQKESDGRCIGPGNGTVRLIDNGELHVHIEYTYSFVPGYKSSIKFKFQILYLD NQRAVLYWCFRRAPNGTCIQHDVTFMIRSRHFSHNDLSMILPYLEKVCIDRKDLRWFD LHSQCGTEISSSTILRRDLITLTHYHVLDILTNVQEPKCLYNEIRGVKADLYSLERAG TWFLMSRMDEMSMDTYAMVGRIFAVTNTTAVLRLFQSAALPGETRECFTRVFTIRERE NVEKSDYWYELHFESTTKNSTFMIFRFLFYNRHVGVIYSCLRNKPDGRCDEKAIYVIS RHESIDHAELTVLEKVAKSVCVEPILLFHVAAHDECIFEHSRLKPPACSSIDSSSSNA EWIEMNLQQVEASYGRLLYQVVASSNSRTPTFALRFDGQHFQKITEQYVQPSGCLSSP ITQIKFSLRNRNLIYLPSDDGLIALIHPAGVRSDLLLREAQMSGVLPCLAPIATPEYQ NCTQLISPVCKSPNDTLTATEPLNGVWMLYSSDPMFVLNWRCTFRDGDDDFSHSFECF SESWVGECERSTRGTIYVNVSNSTFYTVFDEEEAPIRTPEAEIFTSGRISVTDERLLL LKMIISLDGRTRCG" CDS complement(486172..486387) /gene="CBG26306" /locus_tag="CBG_26306" /standard_name="CBG26306" /product="Protein CBG26306" /note="Predicted" /db_xref="GOA:B6IG79" /db_xref="UniProtKB/TrEMBL:B6IG79" /protein_id="CAR98909.1" /translation="MSPAEPPGHHDAPLVFHRMDRPDDGIPPPPPGLMERDGATKTSL LTVLLVVVPLTVGAATVMVRTFNNLLF" CDS join(494894..494937,494950..495025) /gene="CBG26305" /locus_tag="CBG_26305" /standard_name="CBG26305" /product="Protein CBG26305" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG78" /protein_id="CAR98908.1" /translation="MTMEMRNLKLESDSWPTKVIFKQNCSIVLVYKTPKIIRV" CDS complement(join(496017..496228,496281..496428, 496475..496600,496954..497131,497367..497491, 497543..497644,497688..497774)) /gene="Cbr-dyf-18" /locus_tag="CBG_06171" /standard_name="CBG06171" /product="Protein CBR-DYF-18" /note="C. briggsae CBR-DYF-18 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8X0R7" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="UniProtKB/TrEMBL:A8X0R7" /protein_id="CAP26227.2" /translation="MTLSFNRYETIQVAGRGAFGLVVIARDNVTKKRVAIKRILIPNV SKIQLVREVSCLRCLHHRNVLKYLDCFGTADMVSIVTEEVPYTLADVINDKSRPKTEE LNRWFYAQILSGIAYIHSKDIMHRDIKPENILVTLRNIIKIADFGQACFHLKERPDEE YDENVATRWYRAPEILFGYRKYGPMVDIWAIGCILAELVRGKPIFPGRSELEQISVIF GVLGTPNETNWPKWRSMPDANKLLFEPKEPRKNWAEILRCKEVSQEFDNFLRLHLQLC CDFRPTASVLLQHSWIKKKSSLTEPVYRITRKNVEKNRRDALPPIHVFL" CDS complement(join(498311..498541,498586..498683, 498877..498883)) /gene="CBG06172" /locus_tag="CBG_06172" /standard_name="CBG06172" /product="Protein CBG06172" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0R6" /protein_id="CAP26226.2" /translation="MAVLPYAQFVGARAYLLQQKMECKGGKVYDIDNVQDIEQCKEAC RQFDCDAVNLFQVGEFAFKCEILSYVTNLQPANGAACYYAQDALGGGYNNGGFGNGGF GYPGFGKRK" CDS join(509050..509166,511204..511265,511312..511474, 512079..512438,512489..512803,512853..513127, 513173..513270,513329..513492) /gene="CBG06173" /locus_tag="CBG_06173" /standard_name="CBG06173" /product="Protein CBG06173" /note="contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domain IPR011701 (Major facilitator superfamily)" /note="Predicted" /db_xref="GOA:A8X0R5" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR020846" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8X0R5" /protein_id="CAP26225.2" /translation="MSGRISNRSVVVGVRDAAGGSSDDKDNPNEFDALYADSQNSSAP NTSPILLANFGMRCQRLRDFFSLKHCVRWMVFVLTWLQLGSVMNCVDVFSFSMVYMEK NSSIAAEAGLDDIYIYSLEEKSSLISAMAIGSLIGMYPQNNLMQKYGPRYVLTVASFL CATITAFMPWALDTHYHVALVFRIIQGILYSADFGVVGYVVSKWAPISETGISLAALS GFTAARAVIQLPLAGWTTSNIGWRPIYYILSVILVISTVIWFLLYRDDPEEHFLVTRV EVQTITGGRITDHKKDKKTPYREVLSEKSVWAVWFAGFADIFASFVFLVYGAQYYEYL GMDIQANAWLNSMKGYLFIGVRVIAGLASDRIHFLPEKSKLRLFNTISLQVPAFFLVL VVLMPREHPYLHVVCITFYQASFGFNCGGFYKGAALISRQFSYFVIGYIQLFKSLATL LEPVLFSLFVLPGTELSWTSYFLIHAMTLTVANTVYVIFARSEPADFVLNADLELSKP QLPCETSIN" CDS complement(join(514560..514853,514902..515093, 515228..515398,515446..515535)) /gene="Cbr-par-5" /locus_tag="CBG_06174" /standard_name="CBG06174" /product="Protein CBR-PAR-5" /note="C. briggsae CBR-PAR-5 protein; contains similarity to Pfam domain PF00244 14-3-3 protein contains similarity to Interpro domains IPR023409 (14-3-3 protein, conserved site), IPR023410 (14-3-3 domain), IPR000308 (14-3-3 protein)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X0R4" /db_xref="InterPro:IPR000308" /db_xref="InterPro:IPR023409" /db_xref="InterPro:IPR023410" /db_xref="InterPro:IPR036815" /db_xref="UniProtKB/TrEMBL:A8X0R4" /protein_id="CAP26224.1" /translation="MTETVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERN LLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRIKVEQELNDICQDVLKL LDDFLIVKAGAAESKVFYLKMKGDYYRYLAEVASDDRAAVVQKSQNAYQEALDIAKDK MQPTHPIRLGLALNFSVFFYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLI MQLLRDNLTLWTSDVGGDDQEQEGNPEAGN" CDS join(522043..522181,522563..523719,523767..523856) /gene="CBG06175" /locus_tag="CBG_06175" /standard_name="CBG06175" /product="Protein CBG06175" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0R3" /protein_id="CAP26223.1" /translation="MTITDESTSRVADSTVPPATSSPSFFQKICCCCNSDLKEPPVQL IRSGSLTYQQGAAVTSASEPIPPATNVISAAKRSVDDDVEKPQTSQKPNQKEGDADSV NMNDILMEKILSPAEEDRTEAVEEDVVSISTNVIQEVDENELKKAMKPGNDANSPLKG RSGISKEMPSGSEDEEGEVEGDNRKMSVIEFIRREAQAETSTTLPPSTVLQTIPVTDE IEIVYKNEKMSEATQSEMSDSEGTDEDDSETAGKQFNMVGMSSKTTARAEKNGDAEDR RVQEFKELSSDESLRGSTEDEDDEEIITRHQKLEEEEDVPPPLPLTPPPNHYGQLEGS PIPPPRSPRKSMMYANADDSDSDDEESEDAHPVSPPSNGLVRMHPVNFAAHKEEEDDA RSVSSDSSLSTASDVSGKENEEETNIGVTRISVKSDGRAEIHSPKSPVRVTLDTDRNE VTDDDFSEKLI" CDS complement(join(524178..524336,524385..524951, 526004..526266,526312..526434,526485..526727, 527274..527429,527479..527672,527905..527958, 528006..528040,528098..528121)) /gene="Cbr-tag-30" /locus_tag="CBG_06176" /standard_name="CBG06176" /product="Protein CBR-TAG-30" /note="C. briggsae CBR-TAG-30 protein; contains similarity to Pfam domains PF00651 (BTB/POZ domain) , PF08005 (PHR domain) , PF07707 (BTB And C-terminal Kelch) contains similarity to Interpro domains IPR012983 (PHR), IPR000210 (BTB/POZ-like), IPR013069 (BTB/POZ), IPR011705 (BTB/Kelch-associated)" /note="Predicted" /db_xref="GOA:A8X0R1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR011705" /db_xref="InterPro:IPR012983" /db_xref="InterPro:IPR038648" /db_xref="UniProtKB/TrEMBL:A8X0R1" /protein_id="CAP26221.1" /translation="MSSENVVEASEDQEEVPCNRRESQDSCEASNSDSIFQGANQLYP SRRTAANHEHQNQNQQQKSNSTLDLPANVLQDYAASSSQPSSSRHLHSSSTSSLGEVA ALFRNRLPRDDLRRSPNSDKAVNILPVSRNLAEHVSNLIAIGRKPVAVVQKKKPTNTA DENPGARPLLGWQADKKTLRERIEHMYCNETLADVYFVVGVDEFRQRIPAHKFVLSIG SVVFDAMFNGGLTPNHPEEALEIELPDVEPSAFLALLKFLYSDEVKIEAESVMTTLYT AKKYAVPAMEKECVRFLEQCLVPDNAFMMLSQAKLFDEPELTQKCLEVIDKNTLEALN GEGFIDIDLDTLCEVLTRDNLRIREIFLFQAVLRWSKFEAERRGLPASVDNRRIVLSR AIQLIRFPLMKMEEFALNVDPQLLSESEMNKIYKYLAVSPPDRPVLVYSDRPRCQISS TEYVVSRFQRIENRWGFNGTSDRIKFMVDRRIFVVGFGLYGAISGPHEYKTQIKIIHC GTNKTLAEHDTSFVCDGNSRPCRVCFKEPVEILPGITYIAAALIRGPDSYYGTKGLRR VSTNDSDVTFQFTYAAMNNNGTSVEDGQIPEMIYYTAAE" CDS join(525015..525093,525144..525727,525774..525965) /gene="CBG06177" /locus_tag="CBG_06177" /standard_name="CBG06177" /product="Protein CBG06177" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0R2" /protein_id="CAP26222.1" /translation="MNKIVNKSMIGVAKRIMMCRPTHFKVNYSINPWMDEKVQADFEK ATKQWNTLKSTIEKCGAEVVVMESEDARDYPDIVFCANAGILRGKKIYLSHFAFPERY GEHVFYKRFFDELGFETSFNRKIIHEGAGDALWCGEGMNILVSGVGPRSDVQACEDIQ QKIKLNADDKFYVVAARLVDPRFYHVDTCFCPLDENLAMAYMPAFDSVSQNNIRNYTE LLPVPEKDARRFVCNSVVIGKHVIVHHGSDITFKLLEKHGYQVHPIDMSEFMKAGGSA KCCTLRLE" CDS complement(join(528398..528530,528577..528852, 528900..529090,529139..529204,529249..529359, 529743..529817)) /gene="Cbr-ech-2" /locus_tag="CBG_06178" /standard_name="CBG06178" /product="Protein CBR-ECH-2" /note="C. briggsae CBR-ECH-2 protein; contains similarity to Pfam domain PF00378 Enoyl-CoA hydratase/isomerase family contains similarity to Interpro domain IPR001753 (Crotonase, core)" /note="Predicted" /db_xref="GOA:A8X0R0" /db_xref="InterPro:IPR001753" /db_xref="InterPro:IPR014748" /db_xref="InterPro:IPR029045" /db_xref="UniProtKB/TrEMBL:A8X0R0" /protein_id="CAP26220.1" /translation="MLKISIRGFSTSTAARTLLDRELYQENSVVRFILNDKKMNTLSL AMIKELFAELKAIDKIEKVRSVVIAHNGKSFSAGHELKELTTESGTDKHNEIFNTCGD MMNFIRNMKVPVIAEVNGTAAAAGLQFVASCDVVVAGKSSRFLVPGQKLGLFCSTPGI ALVRAVPKKVAMDMLLTAQPIDSEAALRAGLVSRVVDDDQVKFEALKVAEQIGQFSRS VTSLGKAFFYTQAELGTADAYRYGSRVMVGNLKLKDCQEGISAFIGKRHPEFEHSNDL VEETKKN" CDS join(531950..532078,532125..532334,532384..532446, 532494..532682,532733..532906,532952..533143) /gene="Cbr-let-92" /locus_tag="CBG_06179" /standard_name="CBG06179" /product="Protein CBR-LET-92" /note="C. briggsae CBR-LET-92 protein; contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase domain), IPR006186 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase)" /note="Predicted" /db_xref="GOA:A8X0Q9" /db_xref="InterPro:IPR004843" /db_xref="InterPro:IPR006186" /db_xref="InterPro:IPR029052" /db_xref="UniProtKB/TrEMBL:A8X0Q9" /protein_id="CAP26219.1" /translation="MAAAPPSADPLDKALIVDVDQWIEQLYECKPLSENQVKTLCEKA KEILEKEPNVQEVRCPVTVCGDVHGQFHDLMELFKMGGKSPDTNYLFMGDYVDRGYYS VETVSLLVCLKIRYKDRVTLLRGNHESRQITQVYGFYDECLRKYGNSNVWKYFTDLFD CFPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRIQEVPHEGPMCDLLWSDPDDRGGW GISPRGAGYTFGQDISETFNHSNGLTLISRAHQLVMEGYNWSHDRNVVTVFSAPNYCY RCGNQAAMVELDDDLKYSFLQFDPAPRRGEPHVTRRTPDYFL" CDS join(534886..535009,535257..535383,535434..535764) /gene="CBG06180" /locus_tag="CBG_06180" /standard_name="CBG06180" /product="Protein CBG06180" /note="contains similarity to Pfam domain PF03637 Mob1/phocein family contains similarity to Interpro domain IPR005301 (Mob1/phocein)" /note="Predicted" /db_xref="InterPro:IPR005301" /db_xref="InterPro:IPR036703" /db_xref="UniProtKB/TrEMBL:A8X0Q8" /protein_id="CAP26218.2" /translation="MGEPSSSWYNSMAVSTLGSGNLREALKLPPGEDKNEWLAVNIID LVNQVRMVFGVLCEAECTDIKCPSMTAHGRQYTWTSDETVLNTSAPQYIDLSLTSCQL NIDDENVFPSEIGKQFPANFEERCQTIMRRLFRIYAHVYFAHVSHFKEIKALPHLNTS FKQFVLFANQFHLLNKEETEPLREIIENLVSFS" CDS join(537177..537255,537414..537840,537896..538895, 538937..539030,539347..539433,542889..543054, 543107..543418,543505..543963,544010..544104, 544161..544417,544497..544961,545011..545181) /gene="Cbr-trpa-1" /locus_tag="CBG_06183" /standard_name="CBG06183" /product="Protein CBR-TRPA-1" /note="C. briggsae CBR-TRPA-1 protein; contains similarity to Pfam domains PF12796 (Ankyrin repeats (3 copies)) (6), PF00520 (Ion transport protein) , PF00023 (Ankyrin repeat) (6)contains similarity to Interpro domains IPR005821 (Ion transport), IPR002110 (Ankyrin repeat), IPR020683 (Ankyrin repeat-containing domain)" /note="Predicted" /db_xref="GOA:A8X0Q6" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR020683" /db_xref="InterPro:IPR036770" /db_xref="UniProtKB/TrEMBL:A8X0Q6" /protein_id="CAP26216.2" /translation="MSRHGDNEFRLELDSLLPKNDESITKRENSRRPSIFRQQDPDGI ENVRSQILKFAREGNVEQLRIILDKHPEMVNLPDDKDGMTALHYGARYGNFEIVKHLL SRGAIPVTKNLDGDTPLHIASKYHHGFSDICSITNERGMVVMDRLDSERMYNSATKKI INSLVAAKSDIDSPNEYFLTPLHYAAMKSNIAAVQALVKLKANVDAEDMNQMTPLLLA CVHGSQEVIKELIKAKSDVTKRDLRLNTVFHIVALRGEPDFLKMMMEHDPIEAIKALN KENNEGKTPLRMAVEGNHPEALKKILEMESKNSQKWMVREKELIHFAAEKGYLDIIKA LVEAGGNKNEQNSKQALPLHVAAKMNQLECVEYLMDENTRDAADENEMTPLMLAVSQD SLDCVKYLIEKGVDLTITDRDERTPVYIGAKYNALLSVGYILQYLKDQTETTRSEISE TDCLKMSLASKKSLQNIMEDEKRTMVNMADRDQNSPMHIVASNGYLEMMRVILLYEHG AAITQVNEDEETPLHRASHSGQTIAVKQLVEWDKRLLLMKDEMGNSALHLAAKHGHDA TTAVLLLAGADKEAKNSFQLTPLQVAVDSGQLGTCQTLVGKGAEIENQSDAKTVLHTA AYYGHDTIARFLIQQGATVDRRDDKGKTALDVACENGRKEVARVLLETDEFESLMRPN DIIPLDKHRNPENIERDTPFRTLLKKFPDLAAMVMDRCVERNTEDENEPILCVAYNFE YIDDTYMSRVASPDGDGEQLIGYKSPFDENFKLIKDAQAYSANYDQIYRNHPLKMMAN AEKLSLLSHPLSMALLKYKWNRLGRVMYYSALFIYLLFIISLTEFVRHTKAPYNVPMG NDTYYESSFFEDNETCPKLISKNQTSFGNGLLKYWQFVKSESNSSNFTNETLLTVYDF TECSSTSGVRLNWQWLLAALCIFFGWINLLFMIRKLPRFGIFVVMFVDIVKTFFRFFP VFVLFIIAFSSSFYVILQNRPEFSTIFVSPIKTTVMMIGEFEFTGIFHGDSDSHTEKM FGPAHNAVAGVLFFCFCIIMTILLMNLLVGLAVDDIKGVQEKAELKRLAMQVDLVLQI EASIHFFITRMKKYPTNRFAHYPLGSQSRFGIWWTNFRKRFGLNTSNDDDSDMLMEYE SEITTELRSTLKMQFNQLDNLQQNIDVMYEKQIRLEAMIRNLARGLNVGIEVEETDY" CDS join(545422..545452,546100..546221,546269..546406, 546452..546684,546726..546814,546874..547049, 547070..547262,547310..547628,547670..548052, 548100..548326,548367..548689,548735..549110, 549165..549291,549346..549478,549525..549582) /gene="CBG06184" /locus_tag="CBG_06184" /standard_name="CBG06184" /product="Protein CBG06184" /note="contains similarity to Pfam domain PF00024 PAN domain contains similarity to Interpro domains IPR003609 (Apple-like), IPR003014 (PAN-1 domain), IPR001507 (Zona pellucida sperm-binding protein)" /note="Predicted" /db_xref="GOA:A8X0Q5" /db_xref="InterPro:IPR001507" /db_xref="InterPro:IPR003609" /db_xref="UniProtKB/TrEMBL:A8X0Q5" /protein_id="CAP26215.2" /translation="MLLLSFIRNSQQKEANVGILSPYGECFEGFTPTFIRRVGTRHID GPAFVAKIDMVTCSSHCRANFDPSSEESFPCEGFNFRAGRNPVCEFFPATGNNDNVTS SLKTEEAPTFYFEKLCLQIAKRCEESAYMFDVKNGYRIDETPIRIINATVETQCMEEC VKIQCMSFGFHHDAKRCSFYNSTRRDAVIIRDVKMDYYENNCVHPTARCPNGRIEFFA TRKADVPSFGISLGVKSIRSCMQACVNAGQFYCRSVQVQKIFYSIFDSTSNECFVSDE TSDVAVPSTTLDIFEPFCVLRRDENTCNRPYSFEKMITSKLANSSVIKEIPNQSTEKC LQKCIGLENCKSVNYDVLTRSCILSSTSKTDSATISDENFDFYDRSCPHVAPSAILSS TFIPHHPRFHPEATSYKMLERGSQLSGSFVNKTDVENVQDCWTLCLNAKVHCEIISFS SVSNQCLLSTLKVSDIGADKKKITKASESFDTYSKSVVFPTTTHTSIMKPTTSTRIST STTPTTTKGTTKTSTVSKTTKSFTSSESLEDLNDIFDLNENFMDTTTVNIPTTRSRAH AITNTETKSKNKSSESTSLLPIDPELVGLEDSTPVKLPTSSGIAHVDVSKLSVAAICL PQGINITFDLSEMFQKYTGVVYASERFDQCRVFVKNSTSFSIFIPRPQHNSWCNAVEL VRLKIETNSNFLIQNNEMSTIIIMSNDRILPHDVTTKDDLFYQVSCKYNPNDDARVSK GIVVGGPSPVLITKKSQIHEKISLEITKDGQMVDSVFVGEALVATVQSNVSAALLRIV DCTAHRVGGNGPPASVNLIADGCALLPAIMSPMRLTPSGWQSSLSAFRIDGSEQIDVV FIISICDEKKNCPPMACTSPNNREIRSTSEENSIRVDRRLLVKGDKNYAGSQKFFAPI CIESSFYLPAVIIFFCSLSSIMVSIFLAFRRRRLRDAQVEELLSTSIPQDIGPKYIKT MSM" CDS complement(551654..551743) /gene="CBG26304" /locus_tag="CBG_26304" /standard_name="CBG26304" /product="Protein CBG26304" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG77" /protein_id="CAR98907.1" /translation="MLDDFERQNLKILGSKNIFKKTLVNIGIW" CDS join(552637..552697,552739..553359,553408..553613, 553663..553823,553905..554402,555602..555971, 556302..556485,556533..556642) /gene="Cbr-let-653" /locus_tag="CBG_06185" /standard_name="CBG06185" /product="Protein CBR-LET-653" /note="C. briggsae CBR-LET-653 protein; contains similarity to Pfam domain PF00024 PAN domain contains similarity to Interpro domains IPR003609 (Apple-like), IPR003014 (PAN-1 domain), IPR001507 (Zona pellucida sperm-binding protein)" /note="Predicted" /db_xref="InterPro:IPR001507" /db_xref="InterPro:IPR003609" /db_xref="UniProtKB/TrEMBL:A8X0Q4" /protein_id="CAP26214.2" /translation="MRHPLVPLLLLIAFITAVSQAFVPKCNSFYVRWPRVRLNFKAVA EARLSLKGCQSACSLGEDPVSPGKQLECAAVNHQASPDGFSHHCDVSNRINCKMLTDT SRLMIDSHSTGNTVFHVSCPYQNTFSKRKFFAATRKCSGDYAFTYLSDRYMDQKSVVK TTTKANLEDCLSDCLDEKSFECRSISFNRTDGGCHMSKDSQISRPEAIRLNNNPNYRI DYYENNCYNLSESFTFKHECKENGISVSVKSRLPYTGALYGLYDFFTCRVEPKESTEF DHFFPYQTVSKNCSDSIKYKGNEMVLEVVLSTDGIEPLYFITPDDLTYQARCPINGVK AKDAPNTKSSAHLDNRNKAMEASAHALFELLSKTGDDDAATTSSIQNTFSLPLTTTTE LSRQVTKTTTTTKKPSTTTTTTPKPTTTKKSTTPSTTIKPSPVVATTTPTTTTQKTTK TTTTIPPTIPPTTTTTTTKKPSTTTSSTRRSTIMSATPKVAIIVTKESSFARARLFTT KHPSTQKISTLAGKPKVPVIFDIFHNGQAVEAVVVGTKITLSFRPHYPIPPEYVSVRG CQVEPIDPKYEWEHEPLFIIRDGCPADGVGLVCPPTHSEFGAKVSVEAFRYQTTGLVQ YSCLVRICPFASCPKSNCDDVEGCDSSYMHRYRRELSLEDIKKALEANPELASQFGIS PSAFARNPSKTRNFTSVVEEQQRIALGGDHVVRRRLIVVNSEDQLRYYVRTGNI" CDS complement(join(556941..556985,557030..557338, 557398..557814,557863..558084,558127..558434, 558480..558630)) /gene="CBG06186" /locus_tag="CBG_06186" /standard_name="CBG06186" /product="Protein CBG06186" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0Q3" /protein_id="CAP26213.1" /translation="MRPNGYLYPPAKKRSNEDIVCCVVEKTGDETRTSMRQSEIYAYS PSIRIRDGYMVMPKWHWNAYKQGDWFLAVPSYAVGSHEEERDERELTNLRKINPNDYA KYKIPPTNVEFGFVKIKCPFVVCPEFIQNRETRNSNGTYKKLLLLDIGQGFVCNNNRA FKNLSPDQIYMGVFEFRAKDNGACNFSHRSIIRDATNHVYERDAMWELMKIMPGEHGK VHSFQMNEWLEKLKKDAEEFDAKLEQQGVFGGQRRMAAHSLLENPREDDPVNDVTMRT FGLSLSKSNRSQRHYYVEQFHAESLHDQRPSLAAPTGASENTHEFSSVVELENHRSQT IILLTCIGENGEKYEKWYDRETKQSATEPDFLYYKFNSRHEVAVQQSLQPAVAPSVRS RTLSESSFRTYPGRPVATSTPRPSPPHSPPAAEASYPNNRRFFEDSQYRTINAEEEET DENHDTLNETSNTTLMLHDNNANPIYRPPYMHR" CDS join(566259..566317,566575..566701,567338..567431, 567480..567551,568059..568323,568372..568776, 568822..569089,569137..569208) /gene="Cbr-nhr-43" /locus_tag="CBG_06187" /standard_name="CBG06187" /product="Protein CBR-NHR-43" /note="C. briggsae CBR-NHR-43 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core), IPR016355 (Steroidogenic factor 1)" /note="Predicted" /db_xref="GOA:A8X0Q2" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR013088" /db_xref="InterPro:IPR016355" /db_xref="InterPro:IPR035500" /db_xref="UniProtKB/TrEMBL:A8X0Q2" /protein_id="CAP26212.1" /translation="MISGPFIHFDPTATLQAVMMRHPTSPLSIPGTSTSPNVVSASDI HCRVCERQYDGSQHFGIDICRACAAFFRRSVSVKKTFVCRRGTNSCPLNTVSRKTTCQ KCRWMRCLNVGLQVELVSGHRSPDHVKQPSRDEEKFKMEEESIRDGDESDSGSEGKPF DRMDPTPPHEQTFQHIPLHRPIPTMANPNLLLTRNSLISKVLRNYEEFTKNRLELELS LPHIQQEQKMFGSTGIPIVKATRETVFEIYQKQLELLHIFLRSTFSEYEECDVPEQKR ICALFYPVLWEIESCYWTYRNMPATSDCEHFLMCTQTTYIDVRDVEYWLGNTDGNSAE DINTIKTRLERLLQTARTSILDRMHKLIIKEFEFVTVLALNIWAPRNHQQSCLDKAAD HVRTTLFDDLHYLYHDELRIENYAGRMGEIMCLFTEVQTADLSSTIQNIFFSELTAYI NAQ" CDS join(575830..575877,575927..576005,577843..577967) /gene="CBG06189" /locus_tag="CBG_06189" /standard_name="CBG06189" /product="Protein CBG06189" /note="Predicted" /db_xref="GOA:A8X0Q1" /db_xref="UniProtKB/TrEMBL:A8X0Q1" /protein_id="CAP26211.2" /translation="MEVFVEWAPNVVLLVGSMSIVCVIIHIIQSTIRPPKCCNNSSGT LIIGLPQVHPHNSFQYVRLESQNIEADSWHKTAYPVFDV" CDS complement(join(579224..580002,580289..580409, 580569..580685)) /gene="Cbr-fat-6" /locus_tag="CBG_06190" /standard_name="CBG06190" /product="Protein CBR-FAT-6" /note="C. briggsae CBR-FAT-6 protein; contains similarity to Pfam domain PF00487 Fatty acid desaturase contains similarity to Interpro domains IPR015876 (Fatty acid desaturase, type 1, core), IPR005804 (Fatty acid desaturase, type 1)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X0Q0" /db_xref="InterPro:IPR015876" /db_xref="UniProtKB/TrEMBL:A8X0Q0" /protein_id="CAP26210.1" /translation="MTVKTRSTIAKKIEKDAPEAQYLAVNPDEITRLQEESKNIPYKM EIVWRNVALFAALHFGAAIGLYQFFFEAKWQTVVFTFLLYVFGGFGITAGAHRLWSHK SYKATTPMRVFLMLLNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGW LLVRKHPQVKEQGAKLDMSDLENDPVLAFQRRHYFPLVILSCFVLPTIIPVYFWGETA FIAFYTAATFRYCFTLHATWCINSAAHYFGWKPYDHSVSPVENVFTTIAAVGEGGHNF HHTFPQDYRTSEYSLKYNWTRVLIDVAATLGLVYDRKTVADEVISRQVFKHGSEEHRE KSMM" assembly_gap 582220..582874 /estimated_length=655 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(584097..584294,584348..585021, 585048..585339,585363..585395,585441..586042, 586087..586413,586459..586947,586995..587107, 587448..587497)) /gene="CBG06191" /locus_tag="CBG_06191" /standard_name="CBG06191" /product="Protein CBG06191" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0P9" /protein_id="CAP26209.2" /translation="MSTQHPNGYSVRDIILRYESEEEEFVRELEQMMEQSQENENDMV QEPDEGPPILSVLCSLVDEIGSLRTENRRLKTRLVPAPRNSKNVVQRMSAMFEQRGSS IFPKLRRSNRSSDSMEIRNGARERLSTPPRKENSNSMTTSTDVSYGRSGAPPIVRPEL SDSEIDDQVFDEDDHRSRDTTRRCDSVNVPRHQNDHSTSACTSPSSASSSRDPSETMI TSRSSFLDLLGLRRRSTHIPQPTSYSKTTSLKQVIKKRRRKISGNGNDSESSGMYVNM EDHCSRVANKPPRPASYYRRDDSEDSDCLRQIRQRKTASTLNVNNYKHGKKDMYRVSK ETHWQHEKDNLMAEIEEMKMRNLRLVEQLREKSQQQSKLQCQLHKVEMQVNTLSRKCA LSEALDRLTLDERMEKSATVWIKKIEERLRIFENQMQNAKLEAATAHQMALNSSCHEK DAHQNCLEKLENLQREHMRVIHSSLMEIGVDEMNMKRRLENLPTYEALYAFTHSVVRR LNEARWAMIEKANEASRAQIDLIVSQSSHLAQNNANSSRKTSETTIFVPWTQQYRSKC KSEIIATIKKIPSGSAKLEFLLATETAWVSSGKLKTNCEKEFDSWQRQKHRRRILKVI LLLERFDRSIVDVSIELAANSGVPERRATNRIETMIREMNGNNRPTIRRGPSGISNSN LMRDRVTREVPSNRRPISLVETEERRIRRNEETRRSIKFMKTNSIDHGYNAYEPPQRF MNTTTVTASQDVSNNVHSPHNTPVFTRKIIIPVRGNAYDIVPEGTTANIVPASIPQMG RVRKLERAFSAESRNTVDSLHDREERRERREHGEGVERRQSKIQRSQPVSRLKQPSAQ LSRFRTVENGGVNREPPASSILRNRALDPPTSIPRMTTSPPDSRIPTPSGRHGGEKRG WLERLIGIGKL" CDS complement(join(587842..588126,588176..588397, 589811..589996,590043..590264)) /gene="CBG06192" /locus_tag="CBG_06192" /standard_name="CBG06192" /product="Protein CBG06192" /note="contains similarity to Pfam domain PF02520 Domain of unknown function DUF148 contains similarity to Interpro domain IPR003677 (Domain of unknown function DUF148)" /note="Predicted" /db_xref="InterPro:IPR003677" /db_xref="UniProtKB/TrEMBL:A8X0P8" /protein_id="CAP26208.1" /translation="MNYLILFIILPVVFAIQVHNHIGFIRFSKPVPDFLSSLSLKAQY DYKVILENETIPINTKTAEFQKWATTYKVTTQYSNYEAQQSSVKSEMEKNVTQLISEL SLVNSQMFKILQNDTLSIEEQREEVNELAEQYSKKMYLRLSILVVFLLASGTVDSKHK NHQKGEEPAFVRNLTNAQRSSFFGISKNPGISFQQKEDKLVKWAEANNLTEQYAEFYK NLQLHKEQRSKNISAVIERLAEAKVEVDKVNADLSLTKTQRDEKIDELKKTYPQEIPT IFHINSLFDHKGNGTRNGEGKQSKRKHQ" CDS join(591641..591723,591771..591890,591934..591975, 592023..592076,592124..592171,592219..592272, 592321..592714,592761..593048,593092..593382) /gene="CBG06193" /locus_tag="CBG_06193" /standard_name="CBG06193" /product="Protein CBG06193" /note="contains similarity to Pfam domain PF02520 Domain of unknown function DUF148 contains similarity to Interpro domain IPR003677 (Domain of unknown function DUF148)" /note="Predicted" /db_xref="InterPro:IPR003677" /db_xref="UniProtKB/TrEMBL:A8X0P7" /protein_id="CAP26207.2" /translation="MRNLIFLAVLASSVCSLSFWEKAQGYLSGNEAANASAGESGSAA TSNFWAGIQNSSFGQSVQGGINLYNQAKNNSGSNNWQKALANSSLGNYYQQGVNFFSG NGSTSFIDTAAIQQSIGNSSFGEAVQSGIDFYNNLKNGPTPWSGSASDVIGSFVPFLA NASTEAKTEFYAILPKVGNMTINEFETAVDEWAAKYGLTQEVEAFNQRKENETAAAEA HANDVVMNLPNVINNLKAIRADKNQTAMEMHSRMMTYINSLDDDTQEIVFVFFKSFLP PQFTKPRCVDNGNFLTNMYQKASEFFGGNNSTMGSGNGNGNGMMGGNGNMFGSIGSLF SSFNKNGNGNGTDKPHPMLGMLSNFMNKNNISENQANAVMNGVQHDEGFASIQILPVA QADIGRPILSGEGDFSLQIVEQAEATTKKNKKQQQQVNKNKNKKKTTVAPIADANVAL EVNAQVL" tRNA complement(join(593535..593581,593619..593657)) /gene="CBG28891" /locus_tag="CBG_28891" /standard_name="CBG28891" /product="RNA transcript CBG28891" /note="C. briggsae predicted tRNA" CDS join(594473..594556,595629..595710,595987..596154, 596202..596491,596542..596696,596746..596847, 597173..597751,597800..598058,598112..598261, 598994..599125) /gene="Cbr-nhx-9" /locus_tag="CBG_06194" /standard_name="CBG06194" /product="Protein CBR-NHX-9" /note="C. briggsae CBR-NHX-9 protein; contains similarity to Pfam domain PF00999 Sodium/hydrogen exchanger family contains similarity to Interpro domains IPR006153 (Cation/H+ exchanger), IPR018422 (Cation/H+ exchanger, CPA1 family), IPR004709 (Na+/H+ exchanger)" /note="Predicted" /db_xref="GOA:A8X0P6" /db_xref="InterPro:IPR004709" /db_xref="InterPro:IPR006153" /db_xref="InterPro:IPR018422" /db_xref="UniProtKB/TrEMBL:A8X0P6" /protein_id="CAP26206.1" /translation="MSSLLFVFFLICYATADKIEESNSDGYQLFTWKWDDVHHVYVIT VWLLIASLAKILFNLMKPISKWLPDSSLLIIVGLALGWVLHQTTLSGATLDSHTFFLY LLPPIIFDAGYFMPNRALFENFDSVLVFSVFGTIWNTFAIGGSLLLMAQYDLFTMSFT TFEILVFSALISAVDPVAVIAVFEEIHVNEFLFINVFGEALFNDGVTVVLYQMFKSFA LIGSENLSVLDYATGGLSFFVVALGGAAVGVIFAIAASLTTKYTYDVRILAPVFIFVL PYMAYLTAEMVSLSSIIAIAICGMLMKQYIKGNITQAAANSVKYFTKMLAQCSETVIF MFLGLSTISSQHHFDLWFICATLFFCLIYRAIGIVVQCYILNRFRAKKFEVVDQFIMS YGGLRGAIAYGLVVSIPASITAKPMFITATIAVIYFTVFLQGITIKPLVNLLKVKRKE ERDPTMVESVYNKYLDYMMSGVEDIAGQKGHYTFIENFERFNAKVIKPVLMRHQKRES FDASSIVRAYEKITLEDAIKLAKVKNTIQNKRLERIKSENKVAPILPDKISNQTTMTP KDLQLKKFMESGENIDSLYTLFSDLLDRKLHEMNTTPAQKKEVEGEDDIQDDYMAEVG SRSNLSAMFRSAEQLPSEAAFHRGRRQSTGDLNATKRADFDV" CDS join(600178..600272,600754..601032,601080..601218, 601277..601778,601958..602124,602173..602666, 602716..602770) /gene="CBG06195" /locus_tag="CBG_06195" /standard_name="CBG06195" /product="Protein CBG06195" /note="contains similarity to Pfam domain PF00474 Sodium:solute symporter family contains similarity to Interpro domains IPR019900 (Sodium/solute symporter, subgroup), IPR001734 (Sodium/solute symporter)" /note="Predicted" /db_xref="GOA:A8X0P5" /db_xref="InterPro:IPR001734" /db_xref="InterPro:IPR038377" /db_xref="UniProtKB/TrEMBL:A8X0P5" /protein_id="CAP26205.1" /translation="MSRDVSLHWLDYAIFGLSIGLSLSTGVYHAINSRIILRRGDRTA KEEYLMGGRQLPPLPVALSLLTTFLSGILMLGVPAEMFQRGAQIWLNFVIGVASSIVT CFVFLPVFHKMKSTCLHEYFIHRYNSILIRRLFSLLFLLFTIVYMSVVLYAPSVALSP VLQINKWYLVLIFGCTTTLYTCLGGLKAVVWTDSLQAVIMYSGVFTLIYKGLSHPRVG GLERVTSIAFDSGRIEELARMDWRIDQYNSLWINLFSGTIVWLASFGVNQLAIQRYAS LPNLKVAQSIILYTLAPFTVLCSIVAFVGFIALAYFYNCNPLETGEIKESDHITIIFA RDILQPTPGLFGLYVSCIMSATLSTLSSGMNSMAAAIYEDFLKNNLDGKITDTGATRL NKLIVLICGLTSTGLAFLAEVLGGSLRICISVMGAMSGPMVAIFVLALFFPKSGSKSC LISFFLSNLFCLIICIANYIQDPYHELFLPTNTTMEGCNGNSNFTIRMMPTYDAHYGN PDTLYISRISTYSYAGVGFVLMLVIGWITSLFEESDHKEEKISHLTFAGRNEPWPDTH HEFDHFLKEI" CDS complement(join(602893..603001,603047..603205, 603295..603498,603543..603643,603696..603971)) /gene="CBG06196" /locus_tag="CBG_06196" /standard_name="CBG06196" /product="Protein CBG06196" /note="contains similarity to Pfam domains PF08659 (KR domain) , PF00106 (short chain dehydrogenase) contains similarity to Interpro domains IPR013968 (Polyketide synthase, KR), IPR003560 (2,3-dihydro-2, 3-dihydroxybenzoate dehydrogenase), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR)" /note="Predicted" /note="contains similarity to Pfam domains PF08659 (KR domain) , PF00106 (short chain dehydrogenase) contains similarity to Interpro domains IPR013968 (Polyketide synthase, KR), IPR003560 (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR)" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8X0P4" /protein_id="CAP26204.1" /translation="MSAQRFTGKVVLITGSSSGIGQATAILFAKGGAKIVITGRSAEN VEKTRKMCMAVGAKSSDLHPTVGDVMDDGFLTILVETVIDTFGKLDILINNAGTLEVD MSGKEGWEMGVEVMEKSWDSNLRSIMVLTQKAIPHLIKTKGDIVNVSTFLSSGPLGVL SMPYYAVPKAALDQMSRSMAHEFILKGVRLNTVNPGLVRTSFFARLVGDENARKMENY VASKPEYIPLGRVATAEDVGEAILFLADRKVSECIVGQSIIIDGGSRLCCNIDMSDFK EKMSQS" CDS complement(join(604241..604469,604515..604588, 605182..605282,605329..605405,605447..605925, 605972..606068,606115..606410)) /gene="CBG06197" /locus_tag="CBG_06197" /standard_name="CBG06197" /product="Protein CBG06197" /note="Predicted" /db_xref="GOA:A8X0P3" /db_xref="UniProtKB/TrEMBL:A8X0P3" /protein_id="CAP26203.1" /translation="MPRQSRTRNRFIIAFIIMMCMASLYILLLKIRKMNHLSELEENS RHFAIINDIVYYNSTYSASEKPTFMFLITSQIANFYLPMTCSSIDGYTETTSQIAIQQ VGESLLVGICTVVEDPLYVTLKLDDFSMQIDAPTPLEPLSIRKSVVKEDHVICMSHLI LYEDGTTVLSLLKHFKNSAAKIMIYAASVRQADFVSFSSTLFFSNFSDSLYKALEEYS DNVEVVPWMLPETKKRGDFDKLKLDPNYSRAGTDGSLTHCFLRYAPVVRKLTLIDLAT LKFNSIPFNPDYTLSKEVTSLVTAGWKLKKLTNYRVTMNSQNDVVLNEKCFVHQDAQD LDKECGDLQSPNIENTPSRSIYIPKVVQFDNLSIYEDALGRCTSYKSTIEDRQKLMKF EFELENRVSSEVCEIELMRDDFKCRVAMDYSKKMFRRRTRLLITHKRAFLRFWDGCHL " CDS complement(join(606689..607020,607063..607183, 607225..607546,607591..607964,608012..608146, 608193..608767,608815..608887,608931..609004, 609292..609355,609376..609461,609511..609853, 609943..610032,610077..610220,610269..610337)) /gene="Cbr-hdl-1" /locus_tag="CBG_06198" /standard_name="CBG06198" /product="Protein CBR-HDL-1" /note="C. briggsae CBR-HDL-1 protein; contains similarity to Pfam domain PF00282 Pyridoxal-dependent decarboxylase conserved domain contains similarity to Interpro domains IPR002129 (Pyridoxal phosphate-dependent decarboxylase), IPR010977 (Aromatic-L-amino-acid decarboxylase)" /note="Predicted" /db_xref="GOA:A8X0P2" /db_xref="InterPro:IPR002129" /db_xref="InterPro:IPR010977" /db_xref="InterPro:IPR015421" /db_xref="InterPro:IPR015422" /db_xref="InterPro:IPR015424" /db_xref="UniProtKB/TrEMBL:A8X0P2" /protein_id="CAP26202.2" /translation="MSEEIASEVPATEKVESVTDFDQATTDSSRQCGRLKHAAAFSLF RDLHINESLHRKHARSDYKVYDLNNRVIFYVVNTSAMPITKDGPFCLKVMNKDKKVLA VAKFIRNEPKQSYKQTGLASLFGCCSDIEDKMEVLDENGMVIAKSFLHHDQFRGIEIA IKDLSGQVLIRIRGSRDQKDAFSVVGPDNRFLGEIRQKIISSGNSTDNYKGVACWFSP ETELNIKVFFMAAAFLIVRLNGNSETEIDYFSEVTSRQAPFHTPEADYLNPIIKTPPY HDRVPKIRKVAAKTKKKKGKVSKSSKESSRQSETKRETLMMPEIHHTRHFDPIGGEEQ GFAKKEKAEDFKPTEPAAKEEVDVNGMTRDQFKKAAVKVVEYLMKQDENIRTARCSPA LKPGYLKALLPTKAPTKAEDIDDILEDYHKLIVPGLSHSSHPNFHSFYPAGNPFHCLL ADLLGGHIGDAGFYWTSNPALTELEVIMMDWLGEMMALPKEFLLFPEGSRGGGCMQRS DTESNFLVLIAARTEMIQRMKQRDRRLRSSDILARLVAYTSSDARRSIKKAAEVAMVK MRVLPTDENFILRGDTLHAAMVADIEKGLIPFFVGANFGTSGPCSFDHLHELGPVCRD HGTWLHVDAAYAGTALICPETRGLMRGIDWADSFCTTPSKLILAVCDVCCLWVRDRHK LQLASLENHPDLPFKGLPTSQRVGALKIWFMIRSFGVENLQNQIREHIKLGQLMTKML QKDSKFEVCNKVVMGLICFRVKANDMFNKAFLYRCNETGKISLASCILQNKFVIRMCI NSPRCSEEDLDATYKLICNEYDILQPFQNRIEVMNEAELEEFIRAPAKVHSSAEVSRR FPVLNPLEPYRSLSQITSRIQSSECLGTLFFQSHHFHCFFPDAPVKTPKSPQPTASSP SNGPPTRTPAPDNSEKSDQ" CDS complement(610659..610700) /gene="CBG26303" /locus_tag="CBG_26303" /standard_name="CBG26303" /product="Protein CBG26303" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG76" /protein_id="CAR98906.1" /translation="MMPVNFDLNNTKN" CDS join(611987..612262,612307..612711,612760..613423, 613777..614042) /gene="Cbr-gdh-1" /locus_tag="CBG_06199" /standard_name="CBG06199" /product="Protein CBR-GDH-1" /note="C. briggsae CBR-GDH-1 protein; contains similarity to Pfam domains PF02812 (Glu/Leu/Phe/Val dehydrogenase, dimerisation domain) , PF00208 (Glutamate/Leucine/Phenylalanine/Valine dehydrogenase) contains similarity to Interpro domains IPR006096 (Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal), IPR006095 (Glutamate/phenylalanine/leucine/valine dehydrogenase), IPR014362 (Glutamate dehydrogenase), IPR006097 (Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X0P1" /db_xref="InterPro:IPR006095" /db_xref="InterPro:IPR006096" /db_xref="InterPro:IPR006097" /db_xref="InterPro:IPR014362" /db_xref="InterPro:IPR033524" /db_xref="InterPro:IPR033922" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8X0P1" /protein_id="CAP26201.1" /translation="MLSTLARGARSVAVRNYSAATLDAHSQVLDEQKPMEEQVNPSFY KMVDFYFDKGAEVIAPKLVEELKSNSLSQKDKKNLVTGILGAIKPVNKVLYITFPIRR DNGEFEVIEAWRSQHSEHRTPTKGGIRYSLDVCEDEVKALSALMTYKCAVVDVPFGGA KGGVKIDPKQYTDYEIEKITRRIAIEFAKKGFLGPGVDVPAPDMGTGEREMGWIADTY AQTIGHLDRDASACITGKPIVSGGIHGRVSATGRGVWKGLEVFTNDPDYMKMVGLNTG LAGKTAIIQGFGNVGLHTHRYLHRAGSKVIGIQEYDCAVYNPDGIHPKELEDWRDANG TIKNFPGAKNFDPFTELMYEKCDIFVPAACEKSIHKENAHRIQAKIIAEAANGPTTPA ADKILLARGDCLIIPDMYVNSGGVTVSYFEWLKNLNHVSYGRLTFKYDEEANKMLLAS VQESLSKAIGKEAPVEPNAAFAAKIAGASEKDIVHSGLEYTMQRSGEAIIRTAHKYNL GLDIRTAAYANSIEKVYNTYRTAGFTFT" CDS complement(join(616227..616469,616516..617358, 617404..617520)) /gene="Cbr-tgt-1" /locus_tag="CBG_06200" /standard_name="CBG06200" /product="Protein CBR-TGT-1" /note="C. briggsae CBR-TGT-1 protein; contains similarity to Pfam domain PF01702 Queuine tRNA-ribosyltransferase contains similarity to Interpro domains IPR002616 (Queuine/other tRNA-ribosyltransferase), IPR004803 (Queuine tRNA-ribosyltransferase)" /note="Predicted" /db_xref="GOA:A8X0P0" /db_xref="InterPro:IPR002616" /db_xref="InterPro:IPR004803" /db_xref="InterPro:IPR036511" /db_xref="UniProtKB/Swiss-Prot:A8X0P0" /protein_id="CAP26200.2" /translation="MKYDVLARAGFARRGNLHLPHSIVETPVFMPVGTQGTMKGVVTE QLVAMDCRILLCNTYHLGHRPGHERVKAAGGIHKMMNWNRSILTDSGGFQMVSLSKLM TVDENGVNFESPHTGEMMALPPEKSIEIQQALGADIMMQLDHVIHVLTTGDIVKEAMH RSIRWLDRCKVAHTRDDQAMFPILQGGLNLDLRKECAEEMAKRAKVGIAIGGLSGGEE KDHFWRVVAACCAALPPHLPRYVMGVGFPVDLVICSFLGADMFDCVYPTRTARFGTAM VRRGGLMQLNQKRYKEDFLPIDDKCKCNTCKNYTRAYIHSIAGKETVACHLVSIHNIK HQLDLMRDVRQAIQSNSVEKFLRQFLFDYYGPIQSENPSKQDTEKVQEVPQWVRDAVD HMGYTLDF" CDS complement(join(618469..618694,618797..619176, 619223..619464,619516..619726)) /gene="CBG06201" /locus_tag="CBG_06201" /standard_name="CBG06201" /product="Protein CBG06201" /note="contains similarity to Pfam domains PF00107 (Zinc-binding dehydrogenase) , PF08240 (Alcohol dehydrogenase GroES-like domain) contains similarity to Interpro domains IPR013149 (Alcohol dehydrogenase, C-terminal), IPR020843 (Polyketide synthase, enoylreductase), IPR013154 (Alcohol dehydrogenase GroES-like), IPR002085 (Alcohol dehydrogenase superfamily, zinc-type)" /note="Predicted" /db_xref="GOA:A8X0N9" /db_xref="InterPro:IPR011032" /db_xref="InterPro:IPR013149" /db_xref="InterPro:IPR013154" /db_xref="InterPro:IPR020843" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8X0N9" /protein_id="CAP26199.2" /translation="MPATNRRISLGSPKDLREVKFFDEEPIPDVPPKGARVKVCYAGV CLTDREVSNTKQARITNGIKDTSLFPGYEVSGIVESFGSECNPSDYDLNIGDKVIVWP TDEMCSHGYADYVAVPTLHFLVKIPEALSMHVASILPAGATWALSAVLQARPIVEAFS QSKGFCNILIVGAGGLGLWLLKLAKHFLAINNDKKIRLMVADAKEERLSLAERNGADF VVHWDDSEFEEYLIMRTKDVARTGVNVVFDFVTSPRTVTRSLKCLAEGGVLFVGGLSG SIGSIEQLKNLVNLIAGGQIDAPDYRVYPVDQASTVLKQLSMSEVEGRAILEVCDPTS ALDAEQAGGVPIPAATSE" CDS complement(join(621520..621603,621648..621932, 622084..622239,622287..622583,622655..622760, 622804..622927,623541..623604,623650..623791, 623834..623963,624164..624392,624440..624520)) /gene="Cbr-snf-8" /locus_tag="CBG_06202" /standard_name="CBG06202" /product="Protein CBR-SNF-8" /note="C. briggsae CBR-SNF-8 protein; contains similarity to Pfam domain PF00209 Sodium:neurotransmitter symporter family contains similarity to Interpro domain IPR000175 (Sodium:neurotransmitter symporter)" /note="Predicted" /db_xref="GOA:A8X0N8" /db_xref="InterPro:IPR000175" /db_xref="InterPro:IPR037272" /db_xref="UniProtKB/TrEMBL:A8X0N8" /protein_id="CAP26198.1" /translation="MVETENLIATKKESKNEEPSRHQFKTWYEYFFSVNNLCIGLTNF IIFPAKVHEYRGGAFLIAYFCMLIVIGYPAHYLESIIGQYHRSSLMLFMIRCAPILQG FDCYQFFDEKCPDLRSGHIVFKGVCVNETDLPTEGIQSAEEQYLHSVVHKSVKSHMSF SNFDSGMACSIFIIWLSIAFIQLRAGNKTTPLIYVPTVIIFLICPFFFFRALHLDGLI LTHSTWPVLLRQVAHNAWLWVLFYYIAILVVGWKFCACCSSEDYLCFSCGCYSFFYKI TFLKLLYNRSFYSHGFGGSTYIPMVEDVQKVATGLFITAEVLTVLECYGLKIFYGDIH SLMGNPSDSQWSHAYTWSFWKWRWRMAPAFSIFHVLTSFFRQYPSPENDPDYNYYYDF ILFFLVFLVIIIPLIFGYRSYSKIVRYLAKYEKNVSCMLDLAYSNNFFPEENCLPERE PYDQDGYWKSVYLSIETPDRTKILEWELDRTDVKDFQIEEMEIGEESDEEYNSEDEQL EELLNSEFSKSIESFEEATATVEPLTVTFETYNDLWFPNDDKENDHKKQKNLDHYSY" CDS join(627114..627204,627253..627605,627650..628149, 628199..628414,628463..628784) /gene="CBG06204" /locus_tag="CBG_06204" /standard_name="CBG06204" /product="Protein CBG06204" /note="contains similarity to Pfam domains PF07690 (Major Facilitator Superfamily) , PF00083 (Sugar (and other) transporter) contains similarity to Interpro domains IPR011701 (Major facilitator superfamily), IPR005828 (General substrate transporter)" /note="Predicted" /db_xref="GOA:A8X0N7" /db_xref="InterPro:IPR005828" /db_xref="InterPro:IPR020846" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8X0N7" /protein_id="CAP26197.1" /translation="MTSDPSLLSWNGVRLFLICSLLTAMTNFPSGFSHTSVNTAVHKL NEYLNSSFTERYRPLDHEEVSLLKSGINSAWYLFQVIGAMCSPFLCDTYGRKVAFALS IAFMTLAGAMQMIASFTPYSEVLITGRLIAAVFSPLSDAALILYLQEISPASLRGTMS SLYSTGYSTMCLLGMLLGHEGLLGHSLSVLLFVPVIPGILSTAFILWMPDTPKFLLLV KKDKVAALKSLRFFQGFLPDQALLIDSMEQHQKEELAANNKNNIEDKEPATSVMHILT TPHLRKAMLLSVAAAVLTLPFYPILQSSTFFFTDMGVDMRTSQMASSLMMVVLTVSSI CSTLIIDKVPRRVLLLTCGSCTVLFLTVFAVAEQMHQQSIAMGACFGFVMAYGIGVGP VIWSIPPELSPLANRSMMFCFVYSIHSCLVVVTNFSTIPLFMNIGAFSFVVLFAIPSA LALVYLLTCLPETSGREIHVIINELKGFIEDKEPSADIISAVA" CDS complement(join(629946..630041,630093..630190, 630236..630488,630536..636730,636741..637971, 638022..642465,642516..642800,642848..644447, 644461..645548,645597..648215,648262..648484, 648555..648714,649084..649229,649285..649445, 649491..649575,649621..649674,649917..650258, 650378..650488,650722..651393,651409..651417, 651840..651902,652809..652904,657379..657717, 659591..660146,660555..660631,660883..661273, 661324..661586,661632..661952,662311..662475, 662525..662677,663455..663472,664972..665025)) /gene="Cbr-unc-22" /locus_tag="CBG_06205" /standard_name="CBG06205" /product="Protein CBR-UNC-22" /note="C. briggsae CBR-UNC-22 protein; contains similarity to Pfam domains PF00047 (Immunoglobulin domain) (2), PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF07679 (Immunoglobulin I-set domain) (25), PF00041 (Fibronectin type III domain) (29)contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR003961 (Fibronectin, type III), IPR013098 (Immunoglobulin I-set), IPR008271 (Serine/threonine-protein kinase, active site), IPR000719 (Protein kinase, catalytic domain), IPR003599 (Immunoglobulin subtype), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR020635 (Tyrosine-protein kinase, catalytic domain), IPR013151 (Immunoglobulin)" /note="Predicted" /db_xref="GOA:A8X0N6" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR036116" /db_xref="InterPro:IPR036179" /db_xref="UniProtKB/TrEMBL:A8X0N6" /protein_id="CAP26196.2" /translation="MVGAPRFTQKPSIQQTPTVGGGGGGDLLMECHLEADPQPTIAWQ HSGNLLEPSGRVVQTLTPLGGSMYKATLVIKKRCKQVIICCEVMGEEKRTKHKIEGIS NDIKTREQSHQNTNHFHNYRMLLVTVKPEPNAGDGGAYKCTAKNQLGESNANINLNFA GAGGDEAKSRGPSFVGKPRIIPKDGGALIVMECKVKSASTPVAKWMKDGVPLSMGGLY HAIFSDLGDQTYLCQLEIRGPSSSDAGQYRCNIRNDQGETNANLALNFEEPDPTERQE RKRSTASPRPSSRGPGSRPSSPKKSMKSREGTPKRTLKPREGSPSKKLRSRTSTPVNE EASQSESRRSSRTDKMEVDQVSGAAKRKPDGLPPPGGDEKKLRAGSPSARKSPSRKSA SPTPSRKASGAGGATGASGSATTTTTTSNTTTTTSSTSSQQVHESSRDKYTRPPIVLE ASRSQTGRIGGSVVLEVQWQCHSSTIIEWYRDGKLVRNSSEYSQSFNGSIAKLQVNNL SEEKSGLYKCHAKCDYGDGQSSAMVKVEQSGESFLTGKKLTAENQWWFRELISASGTR CPQFYFRFDLNYLSHFSDVEEELMKHRKDMEDEYQKEEEDRRVSQTLQAETKKRVARR SKSKSKSPAPQAKKTATSESMRSEASEGEQKRSSSVRPDPDEMNYTPGSYLQNLLKRS ASNEGSDHNNGASSSSASRRLPPRPPFEPSHSTASNPSSSSNSPRRMFNLRSVSDRQG AARTNDQTPNPLNKNSSGQDLHKISQIHAFILSKMPEGEESQLDEIPSSGLTIPEERR RELLGQVGESDDEVSESISELPSFAGGKPRRKTDSQSSPPKQDEMFSRDTVLRKTTTS TRNESNTVEVCLFNVCFSFLCLFVPFQEKTKLRKTVKKADGELDFKAMVKLKKVKKEE GGTADKPGFPLDRTDSTSSVLSQDSRSRRGSTSLFSKDGHPEQAGNPFAQLKKVKTGA GGLEKSDSTASMKKLELKKGKVEENSDGAFKVQLKKVVKKEVKESSISVKEKNGTESG IKTEFKMEKRERTTLQKYEKTDSNGSKKEDKPKKVSIAPVATSTSSDEPTTPRVRDKT TLEKEFRMHHEKVEEKSKSEELKSKVGGRQVGQKRNGAAPKPEEPKNLLSQIQLKKVT KKAQEETNELEGIKLKKVPGVPKHVADDESQSESESRRGSVFGEFRRGSRAPRDSADN SRRDSIRRSSIDMRRESVQEILEKTSTPLVPSGASGSAPKIVEVPENVTVVENETAIL TCKVSGSPAPTFKWFKGSREVISGGRFKHITDGKEQTVALALLKCRSQDEGPYTLTIE NAHGTDSADVKLLVTSDNGLDFRAMLKHRYSYFFRLWILESQAGFQKDGEGGGGGGGD KKPMTEAERRQSLFPGKKVEKWDVPLPDKTVQQQVDKICEWKCTYSRPNAKIRWYKDR KEIFSGGLKYKIVIEKNVCTLIINNPEVDDTGKYTCEANGVPTHAQLTVLEPPMKYSF LNPLPNTQEIYRTKQAVLTCKVNTPRAPLVWWRGSKQIQEEDPRFIIEKDAVGRCTLT IKEVEEDDQAEWTARITQDVFSKVQVYVEEPRHTFVVPMKSQKVNESELATLETDVND KDAEVVWWHDGKRIDIDGVKFKVESANRKRRLIINGARIEDHGEYKCTTKDDRTMAQL IVDAKNKFLVALKDTEVIEKDDVTLMCQTKDTKTPGIWFRNGKQISSMPGGKFETQSR NGTHTLKIGKIEMNEADVYEIDQAGLRGSCNVTVLEAEKRPIINWKPKKIEAKAGEPC VVKVPFQIKGTRRGDPKAQILKNGKPIDEEMRKLVEVVIKDDVAEIVFKNPQLADTGK WALELGNSAGTALAPFELFVKDKPKPPKGPLETKNVTAEGLDLVWGTPDPDEGAPVKA YIIEMQEGRSGNWVKVGETKGTDFKVKDLKEHGEYKFRVKAQNECGLSDPLTGESVLA KNPYGVPGKPKNMEAIDIDKDHCTLAWEAPEEDGGAPITGYIIERREKSEKDWHQVGQ TKPDCCELTDTKVVEDKEYLYRVKAVNKAGPGDPCDHGKPIKIKAKKAAPEFTGGGIK DLRLKVGETIKYEVPISGEPLPDCTWIVNGKPLKAVGRVKMSSERGKHVMKIENAVRG DSGQYTITLKNSSGTCDSTATVTVVGRPTPPKGPLDITDVCADGASLSWNPPEDDGGD PLTGYIVEAQDMDNKGKYIEVGRVDPNTTNLKVSGLRNKGNYKFRVKAVNNEGESEPL SADQYTQIKDPWDEPGKPGRPEITDFDADRIDIAWEPPHKDGGAPIEEYIVEVRDPDT KEWKEVKRVPDTNASITGLKEGKEYQFRVKAVNKAGPGQPSEPSEKQLAKPKFIPAWL KHDNLKSITVKAGATVRWEVKIGGEPIPEVKWFKGDQHLENGIQLTIDTRKNEHTILC IPSAMRSDVGEYRLTVKNSHGADEEKANLIVLDRPSKPNGPLEVSDVFEDNLNLSWKP PDDDGGEPIEYYEVEKLDTATGRWVPCAKVKDTKAHIDGLKKGQTYQFRVKAVNKEGA SDALSTDKDTKAKNPYDEPGKTGTPDVVDWDADRVSLEWEPPKSDGGAPITQYIIEKK GKHGRDWQECGKVSGDQTNAEILGLKEGEEYQFRVKAINKAGPGEASDPSRKVVAKPR NLKPWIDREAMKTITIKVGNDVEFDVPVRGEPPPKKEWLFLEKPVDDQKIRVSFLISN FLNQTLNSKSNEDYKTRFVLRGATRKHAGLYTLTATNASGSDKHSVEVIVLGKPSSPL GPLEVTNVYEDHCDLEWQVPEDDGGAPIDHYEIEKMDMATGRWVPCGRSETTKTTVPN LQPGHEYKFRVRAVNKEGESDPLTTNTAILAKNPYEVPGKVDKPELVDWDKDHVDLAW KTPDDGGAPIEAFVIEKKDKNGRWEEALVVPGDQNAATVPNLKEGEEYQFRISARNKA GTGDPSDPSDRVIAKPRNLAPRIHREDLSDTTVKVGAALKFIVHIDGEPAPDVTWTFN GKGIGESKAQIENEPYISRFALPKALRKQSGKYTITATNVNGTDSVTIDIKVKSKPTK PKGPIEVTDVFEDRATLDWKPPEDDGGEPIEFYEIEKMNTKDGIWVPCGRSGDTHFTV DTLNKGDHYKFRVKAVNSEGASEPLETDTDILAKNPFDRPDRPGRPEPTDWDSDHVDL KWDPPLSDGGAPIEEYQIEKRTKYGRWEPAITVPGGQTKATVPDLTPNEEYEFRVIAV NKGGPSDPSDASKAVIAKPRNLKPHIDRDALKNLTIKAGQSISFDVPVSGEPAPTVTW HWPDNREIRKGGRVKLDNPDYQSKLVVKQMERGDSGTFTIKAVNVNGEDEATVKINVI DKPTPPNGPLDVLDVHGDHVTLDWRAPDDDGGIPLENYVIEKYDTANGRWVPAAKVPG DQTTAVVDGLIPGHEYKVTPQSILYILHIVMFQFRVAAVNAEGESEPLETFGTTLAKD PFDKPGKTSAPDVTDWDKDHVDLEWKPPANDGGAPIEEYVVEMKDEFSPFWNEVAHVP ASQTNATVGNLKEGSKYEFRIRAKNKAGLGDPSDSASAVAKARNVPPVIDRNSIQEIK VKAGQDFSLNIPVSGEPTPVITWTFEGTPVESDDRMKLANEDGRTKFHVKRALRSDTG TYIIKAENENGTDTAEVKVTVLDHPSSPRGPLDITNIVKDGCDLAWKEPEDDGGAEVS HYVIEKQDAATGRWTACGESKDTNFHVDDLVQGHEYKFRVKAVNRHGDSDPLEAREAI IAKDPFDRADKPGTPEIVDWDKDHADLKWTPPADDGGAPIEGYLVEMRTPSGDWVPAV KVGAGELTATVDGLKPGQTYQFRVKALNKAGESTPSDPSRTMVAKPRHLAPKINRDMF VAQRIKAGQTLNFDVNVEGEPAPKIEWFLNGTPLPSGGKTHIDNNTDNNTKLTTKGTA RADSGKYKIVATNESGKDEHEVDVNILDIPGAPEGPLRHKDITKESVVLKWDEPLDDG GSPITNYVVEKQEDGGRWVPCGETSDTSLKVNKLSEGHEYKFRVKAVNRQGTSAPLTS DHAIVAKNPFDEPDAPTDVTPVDWDKDHVDLEWKPPANDGGAPIDAYIVEKKDKFGDW VECARVDGKTTKATADNLTPGETYQFRVKAVNKAGPGKPSDPTGNVVAKPRRMAPKLN LAGLLDLRIKAGTPIKLDITFEGEPAPVATWKANDKTVEAGARADVTNTPTSSALNVF SAARGDTGVYKIIVENEHGKDTAQCNVTVLDVPGTPEGPLKIDEVHKEGCTLNWKPPT DNGGTDILHYIVEKMDTTRGTWQEVGTFPDCTAKVNKLVPGKEYSFRVKAVNLQGESK PLEAEEPIIAKNQFDVPDPVDKPEVTDWDKDRIDIKWNPTANNGGAPVTGYIVEKKEK GSALWTEAGKAAGTTFSADNLKQGVEYEFRVIAVNAAGPSDPSEPTDPQITKARYLKP KILTANRKIKIKAGFTHNLEVDFVGAPDPTATWTVGDGAALAPELIVDAKTNTTSIFF PSAKRADSGNYKLKVKNELGEDEGIFEVVVQDKPSPPEGPLEVSDVTKDSCVLNWKPP KDDGGAEISNYIVEKRDTRTNTWVPVSAFVTGTSITVPKLTEGHEYEFRVMAENAFGR SDSLNTDEPVLAKDPFGTPGKPGKPEIVDTDNDHIDIKWDPPRDNGGSPIDHYDVERK DAKTGRWIKVNTSPVQGNAFSDTRVQKGHTYEYRVVAVNKAGPGAPSDPSASATAKPM HEAPKFDLDLDGKEFRVKAGEPLVITIPYTASPQPDISWTKEGGKPLAGVETTDSQTK LVIPSTRRTDSGPVKIKAVNLMEKLKPISRSLRHTCTLNWDAPKDDGGAEIAGYKIEY QEIGSQIWDKVPGLISGTSYTVRGLEHGQQYRFRIRAENAVGLSDYCQGVPVVIKDPF DPPGAPSTPEITGYDTNQVSLSWNPPRDDGGSPIIGYVVERFEKRGGGDWAPVKMPMV KGTECIVPGLHENETYQFRVRAVNAAGQGEPSNGSEPVTCRPYVEKPGAPDAPRVGKI TKNSAELTWNRPLRDGGAPIDGYIIEKKKLGDNDWTRCNDKPVRDTAFEVKNLGEKEE YEFRVIAVNSAGEGEPSKPSDLVLIEEQPGRPIFDITNLKDITVRAGETIQIRIPYAG GNPKPIIDLFNGNSPIFENERTVVDVNPGEIVITTTGSKRSDAGPYKISATNKYGKDT CKLNVFVLDAPGKPTGPIRATYIQAEAMSLSCRPPKELRSQITCSKRELREGDWVTVG HPVGTTLRVRNLDANTPYEFRVRAENQYGVGEPLETDDAIVAKNPFDTPGAPGQPEAV ETSEEAITLQWTRPTSDGGAPIQGYVIEKREAGTTEWTKAAFGNILDTKHRVTGLTPK KTYEFRVAAYNAAGQGEYSANSVPITADNAPTRPKINMGMLTRDVLAYAGDRAKILVP FAASPAPKVTFSKGEKKISATDPRIKVEYSDFLATLTIEKSELTDGGLYFVELENSQG SDSASIRLKVVDKPAPPQHIRVEDIAPDCCTLYWMPPSSDGGSPITNYIVEKLDLRHS DGKWEKVSSFVRNLNYTVGGLIKDNRYRFRIRAETQYGVSEPCELSEVVVTKYQFDVP NQPEAPTVRDKDSTWAELEWDPPKDGGSKVIGYQVQYRDTSSGRWINAKSDLAEQCHT RVTGLRQNGEFEFRIIAKNAAGFSKPSPPSERCQLKSRYGPPGPPIQVGAKSIGRNHC TITWMPPLEDGGSKITGYNVEMREYGSTLWTVVSDYNVREPEFTVDKLKEFNDYEFRV VAINAAGKGIPSLPSGPIKIQESGGTRPQIVVKPEDTAQPYNRRAVFVCEAVGRPEPT ARWLRNGRELPESSRYRFESSDGVYKFTIKEVWDIDAGEYTVEVFNSYGSDTATAKLI VQAPPVIEKDVPNTILPSGDLVRLKIYFSGTAPFRHSLVLNKEEIDMDHPTIRTVEFD DHILITIPALSVREAGRYEYTVSNDSGEATTGFWLNVTGLPEAPQGPLHISNIGPSTA TLSWRPPVTDGGSKITSYVVEKRDLSKDEWVTVTSNVKDMNYIVTGLFENHEYEFRVS AQNENGIGAPLVSEHPIVARLPFDPPTSPINLEIIQVGGDYVTLSWQRPSSDGGGRLR GYIIEKQEEGHDEWFRCNQNPSPQNTYNVPNLIDGRKYRYRVFAANDAGLSDPTELDQ TLFKASGAGEGPKIVSPLSDLNEEVGRSVTFECTVSGNPRPEYRWFKGCKELVDTSKY TLINKGDKQVLIINDLTSDDADEYTCRATNSSGTRSTRASLRIKTKPRVFIPPKYHGG YEAQKGETVELKIPYKAFPQGEARWTKDGEKIENNSKYSITTDDKFATLRISDASRED FGEYRVVVENSVGSDSGIVNVTVADVPEPPRFPIIENILDEAVILSWKPPALDGGSLV TNYTIEKREAMGGSWAPCAKSRYTYTTVEGLRAGKQYEFRITAENKHGPSKPCEPTAP VTIPGDERKRRRGYDVDEQGKIVRGKGAISSNYDNYVFDIWKQYYPQPVEIKHDHVLD HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHEADKETVRKEIQTMSVLRHPT LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNRMSEDEAVEYMRQVCKALCHMHE NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK PVGYYTDMWSVGVLSYILLSGLSPFGGENDDDTLRNVKVIVFGLTSSFLTISNFQSCD WNMDDSAFSSISEDGKDFIRKLLLADPNSRMTIHQALEHPWLSPGSVPGRDSQIPSSR YTKIRDSIKSKYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVK PYGTEVAEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVK GDDKGEYTVRAKNSYGAKEEIVFLNVTRQSAPLKFEPLEPMKRAPSPPKVEEFKERRS APKFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKNGHPVDEDRVQVSFRSGVCSL EIFNARVDDAGTYTVTATNDLGMDVSECVLTVQTKGGEPIPRVSSFRPRRAYDTLSTG TDVERSHSYADMRRRSLIRDVSPDVRSAADDLKTKITNELPSFTLQLSDAETDVGESV EFSAQVTGQPEPLIEWLHNGERISDSDSRYRSSFVGGKATLRVSDIKKSDEGQYLCRA SNSAGQEQTRATLTVKGEQPLVNGHVETAENQLRVAKHLAGEVVKTGEAVTFEARIEG TPDEILWMRNGQELTDGEKTSISQNGDTLLLTVNSAEASDAGHYQLEVRSKGTNIVSV ASLVVVGEKADPPVTRLPSSVSAPLGGSTSFSIDFENVEGLTVQWFRGSEKIEKNERV KSVKSGNTFKLDIKNVEQDDDGIYVAKVVREKKAIAKYAAALLLI" CDS join(667787..668092,668138..668212) /gene="Cbr-spe-17" /locus_tag="CBG_06207" /standard_name="CBG06207" /product="Protein CBR-SPE-17" /note="C. briggsae CBR-SPE-17 protein ;" /note="Predicted" /db_xref="GOA:A8X0N4" /db_xref="UniProtKB/TrEMBL:A8X0N4" /protein_id="CAP26194.2" /translation="MTSTSGSDFVTTSTATTGTTGSTPSGTHSSDTGYGLVSLRSDCT DEAIGLELTQEEKEWLRLAHEFTATEKPFKEQKGFHVARKLRTWHPRRHVTWTFLRRL YNGRQDMKDDELRNIAELSIEEKN" CDS complement(join(668410..668674,668723..669222, 669271..669448,669493..669677)) /gene="CBG06208" /locus_tag="CBG_06208" /standard_name="CBG06208" /product="Protein CBG06208" /note="contains similarity to Pfam domain PF01674 Lipase (class 2) contains similarity to Interpro domain IPR002918 (Lipase, class 2)" /note="Predicted" /db_xref="GOA:A8X0N3" /db_xref="InterPro:IPR002918" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8X0N3" /protein_id="CAP26193.1" /translation="MNSITIAVALLSIAFVHCGHNVNPHFMAYMKQNYKPEEVAAFVR DDLTTGSFGGGVVTKETNDRPVVFVHGLNNEAGSLWKVVKDFSAAGYTSEYLFATTWG RGVEQMNLNVAMSCAHVKHVRKFIELVLKYTGFKQINIIGYSMGSPIARKAILGGKCV DDKSVELGPSLQSRVHTYISVAGANQGSYLCGLPFFDICNMNTGLSCNSKFLADINWF KNYESSYKSFNLASTADWVVGYMACGKKASEFPGGHEWKVDGMNHEQTEFDTAAIQLQ MLRESYAGQSKSRPIAKTAQEKKKKEVRRSPTKPKNVQKRVPVPNKPAPKKAAPKKAA PSKKDAPKKAAPPKKTPAKKAAPAKRAAPKKNDKNNQKKSG" CDS complement(join(675329..675584,675633..676132, 676182..676359,676407..676591)) /gene="Cbr-lips-6" /locus_tag="CBG_06209" /standard_name="CBG06209" /product="Protein CBR-LIPS-6" /note="C. briggsae CBR-LIPS-6 protein; contains similarity to Pfam domains PF05990 (Alpha/beta hydrolase of unknown function (DUF900)) , PF05057 (Putative serine esterase (DUF676)) , PF01674 (Lipase (class 2)) contains similarity to Interpro domains IPR002918 (Lipase, class 2), IPR007751 (Domain of unknown function DUF676, lipase-like), IPR010297 (Protein of unknown function DUF900, hydrolase-like)" /note="Predicted" /db_xref="GOA:A8X0N2" /db_xref="InterPro:IPR002918" /db_xref="InterPro:IPR029058" /db_xref="UniProtKB/TrEMBL:A8X0N2" /protein_id="CAP26192.1" /translation="MKWITVAVALAVINTATCGHDIHKHFMAWMKQHYTPEEVKAFVR DDLTTGSIGGGLLTKGTNDRPVVFVHGLNNEAGNLWKVARVFAAHGFPTQYMFATTWG RGLEPTNFNVGMSCAHVRHIRRFIEMVLKYTGAKQIDVIGYSMGSPIARKAILGGKCV DDANVALGPSLQSRIHTYISVAGANQGSYLCGLPFFEICNANTGLSCNSKFLADINWF KNYESSYKSFNLASSGDSVVGYMACGKKASEFPGGHEWKVEGLNHEQTEFDTAEIQLK MLRESTDGKSKSRPAGKNSFAEVKKYLNTKRRDVRPPIPEKPVPKKAAAKKAAPKKAA PKKASPPKKAPTKKAAPAKRAAPKKAAPPKKNQKPASH" CDS complement(join(682772..683431,683478..683729)) /gene="CBG06210" /locus_tag="CBG_06210" /standard_name="CBG06210" /product="Protein CBG06210" /note="Predicted" /db_xref="InterPro:IPR037645" /db_xref="UniProtKB/TrEMBL:A8X0N1" /protein_id="CAP26191.2" /translation="MKRRLLVVLLLFAVSSFADENADDVNPEDVDDVKPPVEEDAIKE VPVEKITVPATLTPLSSTANITTISVQVAPIPAADNATNAEPKPDSEKKEELLTGKEE TPAVKTEVIPEATTIATETLAPLVPKAPEEADDLKEEEKENAAPEFEAKQEVEGGKGE EDPDANVDKPAAVDPPKDEADGAAKEDRETPSVVAEGLHEAVEEARGNPAPGAPTADK KKDSADEEQTLEAGPVARPHRFDTSVSHSTFNNILFQIFIKTPFFSERIPVQFPTHSR GGRGWNRVYVILFYWVIPHYCYLSAST" CDS complement(join(684799..684963,685009..685113, 685159..685416)) /gene="CBG06211" /locus_tag="CBG_06211" /standard_name="CBG06211" /product="Protein CBG06211" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0N0" /protein_id="CAP26190.1" /translation="MNSATPSNETDKNHSETKTTVSMPATETQMTEEELMFYFHLSKY EDVKEKPTALSDEEAFDLWTETNKAHIRYSSSAKQEWKNHIFMYNFFQRRGSQNRASR YLQKIESSKSEKIRAKVSKIRKLNLDYVSLPVERINPDDVKRRRTLERKAKAESSADK LNAERILKSIIFGRI" CDS join(685636..685768,685843..686207,686254..686355) /gene="Cbr-mrpl-51" /locus_tag="CBG_06212" /standard_name="CBG06212" /product="Protein CBR-MRPL-51" /note="C. briggsae CBR-MRPL-51 protein; contains similarity to Pfam domain PF10244 Mitochondrial ribosomal subunit contains similarity to Interpro domain IPR019373 (Ribosomal protein L51, mitochondrial)" /note="Predicted" /db_xref="GOA:Q61SE7" /db_xref="InterPro:IPR019373" /db_xref="UniProtKB/Swiss-Prot:Q61SE7" /protein_id="CAP26189.1" /translation="MNSASISRLTSVIRTTSVRGFHDRSSVPRVVDDREKSSAKYNDA GYTFRYHQQGVDPLPRIPDCKVPVARPNYKVRDQWNDEAARFGQNDYIDLLGDGSVHP AQLQYHTPTWLRGFPGQHKANELIKLIHYRNLYDSKLKQNSPKRWHELRKRIKYLMMQ HNYNKQDEIGRERNLGLWEEEPDYTYKDKSRRSFRDEIH" CDS join(688000..688171,688220..689979,690042..690149) /gene="CBG06213" /locus_tag="CBG_06213" /standard_name="CBG06213" /product="Protein CBG06213" /note="contains similarity to Pfam domain PF00569 Zinc finger, ZZ type contains similarity to Interpro domains IPR015940 (Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote), IPR000433 (Zinc finger, ZZ-type)" /note="Predicted" /db_xref="GOA:A8X0M8" /db_xref="InterPro:IPR000433" /db_xref="InterPro:IPR009060" /db_xref="InterPro:IPR015940" /db_xref="UniProtKB/TrEMBL:A8X0M8" /protein_id="CAP26188.2" /translation="MAAQSSSAPHQMQVRVTFYTSHNPQSVLMILNNEQALEQITEKA QELFSSADYRLFYGDVNGPIYEFTDSEQVMSKIRITTFSRTPQLFVRLESGSSVPSSC NKKTSTSKESKSGASLKRIEQNQELTLKKVEQLQKGLDRVVVLETMLAELKTKESKTV PEVEKEVRPFPPSKHSASCDACLGDIVGHRYKCLECADYDLCEKCERKSVHYEHAMVR IVSPSMTKIPSYVTNNSPNNVFPRYMQSRQISDFERQILEQLSRRSRIAKKQGTPVSP PAAESVPTPVSAPAAAPVAAPEPTSVSAPPSAPVTGPEASKFCFVILTKYIIILTFSG IFNDETCAAIINSAAILKDTFSTLSKSFMDLADGAQANMGTKIVDRSTMEAGVRKVEE KVDSLKRHCEEKCFGIPAPTTETFEEVPRKSAESAPGPKIKKAKKKSVYKKSSEKLVA MTLAAAAEEQYKAREEAKKRADASTAELQRKLAELNMKPATEPVSQTPIQESSNGGSL DALMRAILSPPTVDPTTTPNVEPATPQAPTPVPYEPIYPTVETLIVPPLPVAEPKLEG FIPPQTSVPISIHSSFENISSDMESLSPSWGQYEENADAAEPETMEENLLDFENIVLA QGPSTSDPSLGQPLDAATEKTFDRLLEMGFDYNVVVAAIKANGSDLEKCLIYLIN" CDS complement(join(690706..690924,690952..691610, 691716..691961,692017..692834,692881..693662, 694061..694177)) /gene="CBG06214" /locus_tag="CBG_06214" /standard_name="CBG06214" /product="Protein CBG06214" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0M7" /protein_id="CAP26187.2" /translation="MVPNEVFQKLLYDLFCMWHAVQRHYDPPIPDSEEQRMQKVKNLI CKLLTEIDGRVNRIKQNNSHQRGQDFYEEWTMLTWNVLCITNRLQNSLSQVVVSNEDK MIYSRLNQALVELVNYSRDFLPFPSSNEMDPEYVMLRDKMNQTMMSLHGLYRQMNSTM YQTPDDVENFRIHLQTFGDDILCPCLEHYKTFCNNKGMALWQTVRSVQVGRMRDQLKE HDTSVESLVTFYSNMTYVLAVLGARLQGFRYDLTVNKKFFNFDPVIHMSEAVFAALEL LMSNCVLATEPSTSAILVTNNLFAMNCGALARGVVFKDFEIQVVSEETAEHIQSEMSR QRLLQHPAPIGNVPSAALLAMKPTTGTKRSNAASNADSANNTAHKKSDVNSKESVIIY PVYNAKNRYWAATYPHLLCTTRQKGRQSIHNSYQDLSPSGNNTSSSNDKQGSGKRPIF YFHIKATMFSPSGRFATAHTLSLPFTIATRRNQDCQVQRMMSSYTATIFWLYGYDSQD GLLLQWIDGGMSWDHFKHLFKQHFKVNADVKRSLVDSDFDLLKYKLQCPDCCSGQDGA RINGIQQIVTFKNVLCPHLRYECNSTNVRFSVWRGMLELLQIFHDTRNNVRKLWEMGV LMGFMEFEEVDQELENHNSALIMRLSFVTGGTICFTVKSQAHTTDPRASRPIHLEPLD LKRLQQKCLRDYLRDIAEAEKVKYLVKANREAVRIEDLLEDLKDIGGKPDSPSESREI SSNITHMGDIDTMQHIKFTAMRIAVVTCKVKPPSSDYDENERSKRLSVAAGSRDEDFL REFVNLSNLYGKSKQDLFDSLDFINDQFQPGPIRKTSSVYESVPRHIPLAPAPISQNM APTLISPPPAKVCKKGILLVRSDFEVPNPVMRVSVSPPKVSYQCNISTYTPVYFQPSS QLPSPNQTALPHLYNNSVPMIYDHLHQPHFQY" CDS join(697554..697655,697701..698155,698300..699119) /gene="CBG06215" /locus_tag="CBG_06215" /standard_name="CBG06215" /product="Protein CBG06215" /note="contains similarity to Pfam domain PF03088 Strictosidine synthase contains similarity to Interpro domain IPR018119 (Strictosidine synthase, conserved region)" /note="Predicted" /db_xref="GOA:A8X0M6" /db_xref="InterPro:IPR011042" /db_xref="InterPro:IPR018119" /db_xref="UniProtKB/TrEMBL:A8X0M6" /protein_id="CAP26186.2" /translation="MANSTGITRRRQGNKAEVKPASTPPPKVVEKKKKKRSSAGLGYL PLQIFFGVLISIVVAGLLTNRIINAPIKAVEFELVNKKKHISQLYFFSLGERIPLVGV LAVNSRLTDAELLLEDQVYGPESLAIDEKNQKLYAGFKTGIIAEISLEEGKEKILHAV QLAQGNHDCDGTYSKMHLCGRPLGLRVSNVGELIIADAYLGLFAINWKEEKVVKILGA GELPTNDENAPPIKYLNDLDLLPDGRIIFSESSTKFDDRDFILDLFEHRPNGRLLIYD PRKKNLRVLKDGLYFPNGVQLSIEKGAAKNAPWRVFYSEMGMTRVMQIWVPQDHYSTA PIKTAPLIESLPGYPDNVRLTKSGHLLIPIASQRSEEDRFLEQNPSIREFITKILSNK ALAWVANYVSDAEGLVLKVSAETGQIIESYHDQTGKVESISIAIDDGKGRMLLGSDVN YYIGRAKF" CDS complement(join(699225..699527,699576..699773, 699930..700004,700051..700194,700407..700503, 700553..700581)) /gene="Cbr-bre-5" /locus_tag="CBG_06216" /standard_name="CBG06216" /product="Protein CBR-BRE-5" /note="C. briggsae CBR-BRE-5 protein; contains similarity to Pfam domain PF01762 Galactosyltransferase contains similarity to Interpro domain IPR002659 (Glycosyl transferase, family 31)" /note="Predicted" /db_xref="GOA:A8X0M5" /db_xref="InterPro:IPR002659" /db_xref="UniProtKB/TrEMBL:A8X0M5" /protein_id="CAP26185.2" /translation="MIIWIRRIRRKYSELTRLKKALLLGATVFILWICGLLDKAREED FAEFEWPRLANQESTDSHFMQFPICRLDSDALKLMILIKSSSKNRQMRESVRRTWGSY RVVDEVQVMSVFILFAALDYAGNPSGCVLPDFSFLVDDDYMVHIPNLIKFLKTKSKND LVYEGFVFDSSPFRLKLHKHSISLDEYPYSRYPPYVSAGAVFLTSATVERFKNTMRQL KMFPFDDVFTGILAKSVGVLTTHNENFIFWNRHVTRAEWDDGVIAVHEYARKNLEDKY NQLFG" CDS join(700985..701035,701080..701163,701214..701747, 701780..702362,702410..704116,704161..704559, 704606..704811,704871..705023) /gene="Cbr-spt-5" /locus_tag="CBG_06217" /standard_name="CBG06217" /product="Protein CBR-SPT-5" /note="C. briggsae CBR-SPT-5 protein; contains similarity to Pfam domains PF12815 (Spt5 C-terminal nonapeptide repeat binding Spt4) (4), PF03439 (Early transcription elongation factor of RNA pol II, NGN section) , PF00467 (KOW motif) , PF11942 (Spt5 transcription elongation factor, acidic N-terminal) contains similarity to Interpro domains IPR024945 (Spt5 C-terminal domain), IPR005100 (Transcription elongation factor Spt5, NGN domain), IPR005824 (KOW), IPR022581 (Spt5 transcription elongation factor, N-terminal), IPR017071 (Transcription elongation factor Spt5), IPR006645 (Transcription antitermination protein, NusG, N-terminal)" /note="Predicted" /db_xref="GOA:A8X0M4" /db_xref="InterPro:IPR005100" /db_xref="InterPro:IPR005824" /db_xref="InterPro:IPR006645" /db_xref="InterPro:IPR008991" /db_xref="InterPro:IPR014722" /db_xref="InterPro:IPR017071" /db_xref="InterPro:IPR022581" /db_xref="InterPro:IPR024945" /db_xref="InterPro:IPR036735" /db_xref="InterPro:IPR039385" /db_xref="InterPro:IPR039659" /db_xref="InterPro:IPR041973" /db_xref="InterPro:IPR041975" /db_xref="InterPro:IPR041976" /db_xref="InterPro:IPR041977" /db_xref="InterPro:IPR041978" /db_xref="UniProtKB/TrEMBL:A8X0M4" /protein_id="CAP26184.2" /translation="MSSDESDVASIKEEEDTTLSDDDNSDVEIKSSKKDRKRKIASDS EKSGSENDDDDEENDDDDEDENVSSKKKNKKRKKKAPSGRDFLAWDVEVDDEDEDDDN DYDDEDDPRMNAMNEREEAERAMKEMEMNQRNRDRFKFQNMSEDEVQKYFENKYKADK NSGDYDDEDSAMDDISKNSHLPSTKDPNLWIVKCRMGEEKLVAMHLMRKCLAVENSNE VKQMVPFQIKSVVVKEGLRGMIYIEAFKQSHVMSAIEGFSALNQFNITMVPIKDMVDV LRVVKDIPQLKLGSYVRLKRTMYKDDLAVVDLVDIAQNRVNLKLIPRVDYQRRRGAMR TEADKTYKLKRRPMPKLFDQDAIKEVGGEIVTDGDFIMFEGNHYRRGFLYKYFPINAV QADGVKPTLAELEKFQESSDDLKRELETTSLKDTENPFVPGDIVEVKAGELVNLRGKV MTVDGTKVVMMPDQEDLKEAITLNASELRKYFKEGDHAKVISGRYEGQTGLIVRVKDS TAIVLADLGMEELKVRVRDLQLCADVTTGVDSLGQFQYRDLVQLDHTGTVGVIIRLEK EHLEVLNMHGTVNRIKPQAIISKKDVRFAKVLDSQNNSVEAKDIVRVISGVNYKENES DDDPVGEVLYAFRGTVFIYARKIAKNGGVLVCKPKQLLLQGAKKTSNAPMVARMASPN PMASPRHSAGGMTPGSQDGMSSRGSVGGQTPRQNQNRHFGTANQQKVRRDLTIIGKNV RITKGPMKGLFGIVRDATEDTVRVELHTQCRTISVDRARVMVVGDTGITHTSGGSSFY NTAKTPMRDSSKTPMYGSKTPMYGAQTPMYGAMTPHAGDRTPHYSAMTPAYDGGRTPA YGDGGRTPAYGSKTPAYGDHDEHSSSRTPAYGNESGRTPAYGNESGRTPAYGSDSSRT LAYGKETGRTPAYGNESSKTPAYGSDSSRTPAYGSVDSGRTPAYDQDSSSHSSKTPSY DSSKTPAYGNDYETPMSPTYEPEPADTYNNAPARTPGFDSGRTPGYETYDSGSPTYDP EPAAGAEDDIGDTSSPRYDSPPLSYSAPTPGAMINPATPGAYHVNTPGPFVAPMTPGS GGGYDQYVAPSPYMGGGYDTNNYSSAGEEKIPDHFLSQGHWVMANLYVTIKEHDPRYN DREAIVQNVENGRVEIYVPDLKINLEVEFDQIQPTKPAAGDYARVIFGEDGGHSGQVV SKEGCDALIRSMTDVRDMRSINIGNCCKMHDGGS" CDS complement(join(705302..705623,705674..705772, 705819..705923,705968..706092)) /gene="CBG06218" /locus_tag="CBG_06218" /standard_name="CBG06218" /product="Protein CBG06218" /note="contains similarity to Pfam domain PF08718 Glycolipid transfer protein (GLTP) contains similarity to Interpro domain IPR014830 (Glycolipid transfer protein domain)" /note="Predicted" /db_xref="GOA:A8X0M3" /db_xref="InterPro:IPR014830" /db_xref="InterPro:IPR036497" /db_xref="UniProtKB/TrEMBL:A8X0M3" /protein_id="CAP26183.1" /translation="MAQAEDVEPETYQIMRTIENSLMNNDNVDLEQYLLFWEHVCKVM GSWGTVFGFVVKDVTAKIEKLAAMRVADPESYRSIQTMARKESTDGTIRNLKPNRSGT GHLMVLNRALEFVIDMLDGVFTSDDASLKVSTPARCSYDKHLSQFHSWPIRTAVSAAL YTLPRKTEFLIRLRGSMPESEDGQFHDVFNRDGRDIVRRVNQLVENFDLVNHNPSA" CDS complement(706625..706771) /gene="CBG26302" /locus_tag="CBG_26302" /standard_name="CBG26302" /product="Protein CBG26302" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG75" /protein_id="CAR98905.1" /translation="MMNCVNNGLKVKMKRTNEAREKNERRRYLIVRHKTKRREKGTAA IGER" CDS join(707281..707401,707515..707894,707943..708083) /gene="CBG06219" /locus_tag="CBG_06219" /standard_name="CBG06219" /product="Protein CBG06219" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0M2" /protein_id="CAP26182.2" /translation="MTKPTKSRSVTRSAVEKRRRKRDGGIVSGPVATALVTGMIGMTA KTVAELTSFNPRLSEGGCEWFGTAPLCNFPCPSDYDYIRANNGRCSSWWLSGFCSPDP SFGKPCSTILGDYFSKRFCCKSDPMECTWSGRWMGANTAHNIYCRYDNIGKCGSIDCS INHFNLKAQNSSEIFGDRCDRLELFGLRGKATCGYIAWFNKEGQIVNSWYKTR" assembly_gap 718580..718734 /estimated_length=155 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(720873..720960,722497..722801,722851..722973, 723020..723250,723300..723491,723542..723694) /gene="Cbr-bath-37" /locus_tag="CBG_06220" /standard_name="CBG06220" /product="Protein CBR-BATH-37" /note="C. briggsae CBR-BATH-37 protein ;" /note="Predicted" /db_xref="GOA:A8X0M1" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8X0M1" /protein_id="CAP26181.1" /translation="MTYEEDDGLNSTLIPYPYIAIPPPTQQPSNIELFLSLLHLVCLT SSLCGNVSQLVLQLYTRRLRDSTHVQKFLAFFFIINAFVSLGTPWMIVETLVRHWTFG PNACKAYQATAQVGRTVLPYIIVALYVITSISINPSRKCSMRQSFTSMILVIIFALLV LFIIIPVIGSSTLVPQIHGNHLPGELYSVMFESFFCVIPFSEEVYTDGVALLVEVIVP LILCIICAIQLKTAPKGSNPQMSTDSMNYYLIWISVIHFSTSFWYYFSTETKLWIFGF IPSPMDYRDILCLLPYLSSSLTWYPASDMSAFWSLYEAQSESPQSFHSRNSSRHVRLV VPPSTSALEDGGYSHNCHLPLSSQNTCDV" CDS complement(join(723943..724185,724233..724532, 724574..724732)) /gene="CBG06221" /locus_tag="CBG_06221" /standard_name="CBG06221" /product="Protein CBG06221" /note="contains similarity to Pfam domain PF01105 emp24/gp25L/p24 family/GOLD contains similarity to Interpro domain IPR009038 (GOLD)" /note="Predicted" /db_xref="GOA:A8X0M0" /db_xref="InterPro:IPR009038" /db_xref="InterPro:IPR015720" /db_xref="InterPro:IPR036598" /db_xref="UniProtKB/TrEMBL:A8X0M0" /protein_id="CAP26180.1" /translation="MGRFTIVITLLIIASFVRCGEYDFTVEVAAGKFQCFFQPVDLTK HKTLEVDYQVIDGGDLNINFMILHGANILKQDQLKVDGSHRIELNQPGDYQICFDNSF SYQSRKVVFFEIFLFDAHGNLDETDLSAMARTDADLSSKMNELGVTIDEFHRRANGIK NNLNKVEYHQALLRAHEARDRAVMSANFDRVTFWSVVHTLVMVGVAGVQVFMIRSLFE ENSKIGKVLRKGKFD" CDS join(726195..726323,726370..726500,726550..726764, 726805..728920,728969..729054,729102..729248, 729296..730190,730237..730375) /gene="Cbr-lex-1" /locus_tag="CBG_06222" /standard_name="CBG06222" /product="Protein CBR-LEX-1" /note="C. briggsae CBR-LEX-1 protein; contains similarity to Pfam domains PF00004 (ATPase family associated with various cellular activities (AAA)) , PF01695 (IstB-like ATP binding protein) , PF00439 (Bromodomain) contains similarity to Interpro domains IPR003959 (ATPase, AAA-type, core), IPR002611 (IstB-like ATP-binding protein), IPR003960 (ATPase, AAA-type, conserved site), IPR018359 (Bromodomain, conserved site), IPR001487 (Bromodomain), IPR003593 (ATPase, AAA+ type, core)" /note="Predicted" /db_xref="GOA:A8X0L9" /db_xref="InterPro:IPR001487" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR003959" /db_xref="InterPro:IPR003960" /db_xref="InterPro:IPR018359" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR036427" /db_xref="InterPro:IPR041569" /db_xref="UniProtKB/Swiss-Prot:A8X0L9" /protein_id="CAP26179.2" /translation="MARSDGFSPRKSLRRSAREHSRSYVGQGSNDDFDDMYSPPSRRR GSGGGDGNGYTRSGRKIHHSRYYEEDYQDAISSDDERMYRPRRNSNSLTYRQQCKQAI DESKRIQKVPPAKRKRIYMSDDEEEFVETRQMENTAPDRPTRRSSRRMSSTHEEPDVL DQEDVSPIRRTRRTTIRFGSEPVEENMEVPRVLETNDMANEAIVQAVDNTENGETEED VIEKIGREEEEEGDEEEAESGEKEQVGLLFHRIFNQAYLQEDEESSNAESSEESTAPR QYSLRRRQPVVQFNQSEARENRRARLEHHRAANANRHHRNRNTSNRRRRSGSDSDSDD MVLPRPDKRQSRPHMHNRGERERGRFMPINMTEKELQSAQHILMDRMRKTDAGQGASD IDPMSVDSSVGFDQVGGLSHHIQSLKEVVLFPMLYPEVFAKFKINPPKGVVFYGPPGT GKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIF FDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDSLDPALRRP GRFDRELRFSLPDLNARRHILDIHTSKWEENKPTPETLDGIAEKTSGYCGADLKFLCT ESVLIGLRSRYPHIYMCSERLKLDITTIKITEEHFGHAMRRITPASRRDLTIPSRPLD ERTSILLGDIVKNLISLRIPQGYRCVENAMATASTELEQVVRALEPNLTVPAIRLLLC GSPSLSDGGQTSYVLPAILAKLDHLPVFSLSVSSLLTDGRPEEAFSNAVQSAMRASAT GPCIMLLPSIDEWIKVIPVSVQHMLITCLESMTGFTPILFLSTLDSSFEDAPEYATEV FRHANCISLNPSRRSVRKRYFEFVIDGVRRKPKVFDPTIYEMPQADDDSPEAKPSRKL NDDETRELLKMYTALQRQMRMFFKERLSRLIRDRRFVEFVEPVDPEEAEDYYEIIETP ICMQDIMEKLNKCEYNHADKFIADLVLIQSNALEYNPSNTKDGKLIRQMANTFRDAID DMIDCELDESFVERIEMVSRMLQDAGVTPTSDQLLTEIPKGFSRKKPWTMANTLAKEI EQWKAEREAENEKLKEKLGISTDTAQSAIEENKSEEGTSSSVEEIKKKLNKKKKDQKR NKKASSQDPDGDDTEETEEAVAENNVDADVEMKETPADPVPTIQSSSSQEREIIVSAD SITDLIKLCVEKSEGWSVSELERLSSVLSHTIERFRDEWNRENLPEQLAQIVREWEAT DATNEKIANGKASNKNGIVFNGY" CDS join(730841..731397,731548..731659) /gene="Cbr-repo-1" /locus_tag="CBG_06223" /standard_name="CBG06223" /product="Protein CBR-REPO-1" /note="C. briggsae CBR-REPO-1 protein; contains similarity to Pfam domain PF12874 Zinc-finger of C2H2 type contains similarity to Interpro domains IPR003604 (Zinc finger, U1-type), IPR019134 (Cactin C-terminal domain)" /note="Predicted" /db_xref="GOA:A8X0L8" /db_xref="InterPro:IPR000690" /db_xref="InterPro:IPR003604" /db_xref="InterPro:IPR031781" /db_xref="InterPro:IPR036236" /db_xref="UniProtKB/TrEMBL:A8X0L8" /protein_id="CAP26178.1" /translation="MDFQNRAGGKTGSGGVASAADAGVDRRERLRQLALETIDLQKDP YFMRNHIGTYECKLCLTLHNNEGSYLAHTQGKKHQANLARRAAKEQSEQPFLPAPQKA AIETKKFVKIGRPGYKVTRERDPGSGQQALLFQIDYPEITDGIAPRHRFMSAYEQKIQ PPDKRWQYLLFAAEPYETIGFKIPSREVDKSEKFWTMWNKDTKQFFLQVAFKMERLDE QPYY" CDS join(731950..732936,732985..733082,733430..733526) /gene="CBG06224" /locus_tag="CBG_06224" /standard_name="CBG06224" /product="Protein CBG06224" /note="contains similarity to Pfam domain PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) contains similarity to Interpro domain IPR000504 (RNA recognition motif domain)" /note="Predicted" /db_xref="GOA:A8X0L7" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR034220" /db_xref="InterPro:IPR034221" /db_xref="InterPro:IPR035979" /db_xref="UniProtKB/TrEMBL:A8X0L7" /protein_id="CAP26177.1" /translation="MAKKVMKRKAEAVSEEVVADVTGDSVKTKKPKKETPTKPLVTYE AGGLANLFGKSSDSATIVEDVTKGDKVIEKPKRRKNDPKKEAEEKKKGGEETAITEKT PNVDGEETKEENKKGKRDRTKQRENRVLAKSNARSTAADNAKTVFVGNMPLTMNEKSV SRIFSDFGKVSSVRMRCLIPTNEKLTRRVTHLSGKLSDKQTSLTFYVKFEEEESVEKA LKYNGTKLEDHLIRVDTVGTKKGFGKDMAIFVGNLPFDITEDTLSNFFTEKVGAIEAV RIIRDKDSGKGKGFAFVNFKQDSSASLALSMETIKMDKRDLRITKVMKKGHLTKIQSA KKRAPLSKKQTEITGKLQNFKFSTKKQRTTEQNDRRALKKSAKKAIKKKKAAKQGRLM A" CDS complement(join(733795..733984,734032..734336, 734383..734499,734549..734827,734872..734945, 735053..735164)) /gene="CBG06225" /locus_tag="CBG_06225" /standard_name="CBG06225" /product="Protein CBG06225" /note="contains similarity to Pfam domain PF08551 Eukaryotic integral membrane protein (DUF1751) contains similarity to Interpro domain IPR013861 (Protein of unknown function DUF1751, integral membrane, eukaryotic)" /note="Predicted" /db_xref="GOA:A8X0L6" /db_xref="InterPro:IPR013861" /db_xref="UniProtKB/TrEMBL:A8X0L6" /protein_id="CAP26176.2" /translation="MGVKSVLGDLQIVVERHSDVLRNNALPFRFLVVLRIIGFIVSYL HFARSLLWLHPYQLASIELWRIATSAFCGHNLIDVLWSVWCLHFGTNLVRLNNTNESL LKLYAITQGITTLVIVVFAYLTYIFFDSIKFFYIEPLVGMTPVCAAVMVLMKQFLPDT IVLATPFGRIKYTHLPFLVIYVSFILALTKFIYFVSFLQIAIGVQVSWTYLRFYKPHE TDEIYGDGSEHFTWASLFPSRTQLFFTLIGKVCFRSLARMGVCKRQVRHVDLNSLQSV AVGINLPALENSAKDSERRRQKALKELNERLNKTRTAEVANYGNWDDDENDEPSSVAV VSPPASNVHSSSRPNTENEKESMA" CDS complement(join(735902..736076,736120..736595, 736823..737716,738079..738717,738758..738880)) /gene="CBG06226" /locus_tag="CBG_06226" /standard_name="CBG06226" /product="Protein CBG06226" /note="contains similarity to Pfam domains PF00642 (Zinc finger C-x8-C-x5-C-x3-H type (and similar)) (2), PF00097 (Zinc finger, C3HC4 type (RING finger)) contains similarity to Interpro domains IPR000571 (Zinc finger, CCCH-type), IPR017907 (Zinc finger, RING-type, conserved site), IPR018957 (Zinc finger, C3HC4 RING-type)" /note="Predicted" /db_xref="GOA:A8X0L5" /db_xref="InterPro:IPR000571" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR001878" /db_xref="InterPro:IPR013083" /db_xref="InterPro:IPR017907" /db_xref="InterPro:IPR018957" /db_xref="InterPro:IPR036855" /db_xref="InterPro:IPR036875" /db_xref="UniProtKB/TrEMBL:A8X0L5" /protein_id="CAP26175.1" /translation="MQLKAMDKAFVPQTMADLVSNITARSTDVEDALFNQKGMKEAPF RDLDRSGKAVCTKNKTKQCPFGNTCPLRHIDGEKAVVCKHWLRGLCKKGDQCEFLHEY DLTKMPECFFFSKYSACSNRECPFRHIDPETKLKDCPWYDRGFCRHGPYCKHRHRRRA VCPNYLAGFCPQGPDCQYAHPSFGLPNLENIPISHSKPVYSQGITCHNCHERGHKATS CPSLPGQNRQSQDHHHRVDLSMIPDKKNLSDVTCYKMPRKRGAPAETGNRSRVTRRSN THTAPPSKRKPSPDSEVDSDDDYEASTSTARKGKRGGSTAIRGRGGSKSKRASHQMKE DVDEDFDDDDEEEEEDNGANEASEETPEVTPKKQPKSTAKNKKKKETPPTSPSPTPSL SPSPAPVVVKPEPAPRRGRKSVAPTGRGKKGPAESETKRSAPSRRKKQVVEDDEEETP EEKKYRERAERKARRIEEAKDRPKMTLEEKLIKLAKKKARRLRRKEQEKEEAMRQKYG SRKIKAEASKWNFGPISSINQRRREEMMVYFPKANFSSTNGVPPGYIVDAITIIDCMH TFCKRCLLNYFDSDNKTCPTCGTFIHGSHPTHYVTYDRALNDLVNQFVPKMEDNELEA RKKLLRDCREAIGIDTAAEDRERAERLERERVTGTNRCYPLELPRFSHHRDDCQVTVN LLPGTANLPLITRPFVRCSEMTTMNTLKKFISLQIWDDQSRYGDLDVFCDGQLMGKDF SVRFVWMMKRRGQPKSEPLVIRYHMTRS" CDS join(740006..740111,740156..740270,740321..740397, 740533..740703,740748..740987,741032..741129, 741177..741388,741436..742027) /gene="CBG06227" /locus_tag="CBG_06227" /standard_name="CBG06227" /product="Protein CBG06227" /note="contains similarity to Interpro domain IPR007311 (ST7)" /note="Predicted" /db_xref="GOA:A8X0L4" /db_xref="InterPro:IPR007311" /db_xref="InterPro:IPR011990" /db_xref="UniProtKB/Swiss-Prot:A8X0L4" /protein_id="CBX32994.1" /translation="MACSWTFLWLLWIAMVAVLLFFLRGPLKISESLESVSATSYFNN LTPKFYVALTGTSSLVSGIILIFEWWYFKNNAGVEQGEDEGSDNEESIDNPKTVPECK VWRNPMALFRAAEYNRFRKETNSEPLTYYDMNLSAQDHQSLFMCDEDQGRAEYEIMQV AWRERESEQRIQTARTALAINSECASALVLLAEEDTETVAQAENVLRRALRAIENTLS TYSNNQIASYGQNGDTVRKRDLTIQTYIKRRLAMCARKQGRLREAIKGFRDLSREQSL STLLSVQDNLIEACLEVQAYADVQNLLVRYDGYGTSCSYDQREPRSAAMSYTSALLKV RAVAENFRCPSESSVRRGLSSAEQTAIEALTRAMEFNPHVPPYLLEIRAMIMPPEHFL KRGDSEALAYAFFHIQHWKRIDGALQLLSIVWKDFVPKVNKDTHAFSSQLESADKELL PAWHEQSAFPQTESTLGMLIQTFACLAICILAVLSQQVPSSYGEMLRQIVTSGVQMYE NSMNTFSQWAPNNIIPYLASKPVSVPEI" CDS join(742405..742710,742756..742887,742939..743295, 743345..743578,743625..743974,744021..745313, 745358..745526,745571..746722,746769..747082, 747140..747324,747460..747611,747653..747946) /gene="CBG06228" /locus_tag="CBG_06228" /standard_name="CBG06228" /product="Protein CBG06228" /note="contains similarity to Pfam domain PF12783 Guanine nucleotide exchange factor in Golgi transport N-terminal" /note="Predicted" /db_xref="GOA:Q61SD1" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR026829" /db_xref="InterPro:IPR032629" /db_xref="InterPro:IPR032691" /db_xref="InterPro:IPR032817" /db_xref="UniProtKB/Swiss-Prot:Q61SD1" /protein_id="CAP26173.3" /translation="MSINAVDSKKLVEALLGDLRLLSQEAKKKQNHVKESAETGVVRI RNISTASVGDTVLITNLRAACTELLHPLVLACETRHTRLVQIALQGIQRLVQHRILSG NGATIVTNELWALVEAECEELRVLQTVPPLVSSELIVTGNTLAKCVVMCFRLHFAKDP IVINAASAAVRQLVSTVFERVIQEDGIFSSELTVVNPSGGRPSPRAAPPTLRPCAADA YMLFKDLCLLINGEAPTWLVGIQEMTRTLGLELLESLLKGYPSVFIRHTEFGDLLKDD VCPLIIRLFSPNVKAMHINSQHPSSRISNASMSNYPPTVSHDRQSFPISMRLVRIVTL LVQFYQNILHTECEIFISTLLKFVDGDRKGWQRPLALESLHRIISSTDLVKWMTESFD CRPNSTHVLEQVAVELSVVVQQCLVCTTFSSDQDNELDRSQEDGGPGFLVKGLWVPYV EHLTSKKTILLDSLDRMDAVAISEGYVLSRCCVALCDLTQAVYAVIDRLCVLDENCEA GSSEENLRIAKVAYANTQPSILAAIGSLLAASTDEIVSDQLLCCLSTLISAGCRVGAD QDLHRSVYVLAIMSLPSPSYLNQFAGIPPPSPVSKREVSISEQVFDLESWPSTAQVTA TGPPCPCPVVSTDLWNKQVLLTSKNLQAARTFIASITTHIKELNGLWYLCMATCEHLS WLLAMRPTQIGQFERETRDDHSNGPTVVTNAALGDIGMLSSLMDKVAPAIAALPNEEF LLVVDALIRLSDESLAVAATGRDSSLFPLAVLYRVCSLSLSGINVFWAKVANHFIKVC NHTSVSMRDWAAVALTSLAKHAIKSKTSMDPKSQQEMVIASLLALCSIPHIQVRRRQL DCVMSLMQTDGSSLLSTSWPNVIQIISSIIDNDTGCELSLVRQGYLGLRLVSSDFLQS IPFDCISGLVEAISRYSKQNTDQNISLSALTLLWTISDFIYRKMESVGNDASEAVWMV LYTCLSESCVDTRFAVRKSACQTLLQTVTAHGHALRAPAWHHVIWQIIIPLLDKVRSQ TRCASTEKSNGELIMHHSRDTEQKQWTETCIHTLSAISKIFNSQRKSLLALNDFGAVW EAFLGYLDWAACYENAELSLSAIRSYQEVLLGKISSQTLNVNSHEKSNGSESTLDTVA PELPQAQWVESWKVWLRISRGLARQGCAAVANSVNADTKSTSSTPRMNSSTSSLTSLA PGVYVPGPSHLTAILHIFPPLFDKVAKCITVDDLKYESLPAVLESMMNVPIPSEQAPF VLPSSTTHLTPTQEALLEAVKIVYVECTISGTTLRTAIPDQIRLLLKFASMATQRISP NKVAPGGQKSYRDYALTAIVPFSEYSLRIAIEFFTSTSQYPDVSNSLIAINIIKFLGE PLYMKYTCISASTWKLAASSLMSVLRTSIPYARQNPEVFRSLWSTICDTMERWLFTPN KSSRLAADERKRDELMECQAIEIIRNEMLAYASRLPQEDVQRLISLLHRGSISQIDST DVLDSHTQRNELAKACFDALLMSTDGAQAGAEEDDHRGILGNVAVTSLLQRCTQVMAD FCKDWSAAGDLRLPRSRILEIISALQAIDSLIARLARDPRMTELYSQLVSLFPSVVDV MPCCHADGQLEQQLIKTIKSYQTLFLLQNIPQSTV" CDS join(748383..748808,748856..749024,749072..749205, 749250..749698,749749..750004) /gene="CBG06229" /locus_tag="CBG_06229" /standard_name="CBG06229" /product="Protein CBG06229" /note="contains similarity to Pfam domain PF00733 Asparagine synthase contains similarity to Interpro domain IPR001962 (Asparagine synthase)" /note="Predicted" /db_xref="GOA:A8X0L2" /db_xref="InterPro:IPR001962" /db_xref="InterPro:IPR014729" /db_xref="UniProtKB/TrEMBL:A8X0L2" /protein_id="CAP26172.1" /translation="MNKVTDYNTWWFLNHGVVHVEIDGVVSYVMEDMLDFSGTTTDLD IKDLQSDSVEQIVERILNIEGAWSIVYYNRKLEKLFIGRDVFGRQSMVFNFHLKAFGC RSQRKCAGEWVEIPFGQVTVFDPMMDQSPTVYSYFESYPVGIMEKYFPKHPPKHVFVH NKDPLLNVSRAIGGRVDVSNAKLLFQKVTDATKALLRKYNKSHVIVCLSGGVDSTFIA HAVHASVDSDMTIDLVNVAFGSGKKECEKAPDRSRVRKALESLRVAYPKRKFRLILVN VDKKTLEQHRTESIALAAEPAVTVLDDSLSCVLWFALRGEGLDSDNMNPVTSPATTCL LGSGADELLAGYARHRTRFEKEKIPRNIAEECENELRRLGSRNGGRDARVASQLKKTI MSPLLEDTVVIWLNSLPVDSKWDLSLKRGVGEKQLLREAVKMLGSPYDAPKQAMQFGS RMAKMSNGSKTIKGSDKSPHLAIEDNL" CDS complement(join(750101..750967,751018..751161)) /gene="Cbr-col-129" /locus_tag="CBG_06230" /standard_name="CBG06230" /product="Protein CBR-COL-129" /note="C. briggsae CBR-COL-129 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain) , PF01391 (Collagen triple helix repeat (20 copies)) (2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X0L1" /db_xref="InterPro:IPR002486" /db_xref="UniProtKB/TrEMBL:A8X0L1" /protein_id="CAP26171.1" /translation="MSAARYLVSIAAATSSLAVFASIVSLVYLVNDVNNYYDDVTRNI ENFKDDANTVWHQMMTVVPQGDKQRQVYESVFGRAKRQAPQCNCGANSAASNCPAGPP GPPGAPGEDGDHGLVGEDGTPGADGNLGVPLSANGCIVCPAGPPGPPGQPGKDGQRGN DGQPGQDAVGGGQGAPGPQGPAGDNGQPGRPGNDGRPGAPGAPGTRSVGRPGAPGGPG PQGPPGARGNDGQPGNDGAPGQPGQPGPDGHPGQPGNAGPPGTPGAAGQPGGDAAYCP CPSRSSVVRAQAAVARNRIAAKHRSVSRRKAVAARRSKARRVVAAKHRAVAKRHRAVQ KA" CDS complement(join(752394..752426,752470..752709)) /gene="Cbr-dlc-2" /locus_tag="CBG_06231" /standard_name="CBG06231" /product="Protein CBR-DLC-2" /note="C. briggsae CBR-DLC-2 protein; contains similarity to Interpro domains IPR019763 (Dynein light chain, type 1/2, conserved site), IPR001372 (Dynein light chain, type 1/2)" /note="Predicted" /db_xref="GOA:A8X0L0" /db_xref="InterPro:IPR001372" /db_xref="InterPro:IPR019763" /db_xref="InterPro:IPR037177" /db_xref="UniProtKB/TrEMBL:A8X0L0" /protein_id="CAP26170.1" /translation="MSEEKIEVKETDMEDSQRDMVISIVREAQRLYNIDKDVAAFVKE ELDKKFGATWHVICGKCFGSRVSYEMGHFILLKCNKVNVMIYKCGY" CDS 753995..754105 /gene="CBG26301" /locus_tag="CBG_26301" /standard_name="CBG26301" /product="Protein CBG26301" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG74" /protein_id="CAR98904.1" /translation="MPFFTSLNCFELIEYLGFLSMHFLFNNKKITSKTRE" CDS complement(join(756073..756134,756189..756294, 756342..757158,757204..757330,757377..757600, 757649..757983,758030..758731,758775..759099, 759145..759346,759395..759683,759733..759875, 759929..760001)) /gene="Cbr-ddb-1" /locus_tag="CBG_06232" /standard_name="CBG06232" /product="Protein CBR-DDB-1" /note="C. briggsae CBR-DDB-1 protein; contains similarity to Pfam domains PF10433 (Mono-functional DNA-alkylating methyl methanesulfonate N-term) , PF03178 (CPSF A subunit region) contains similarity to Interpro domains IPR004871 (Cleavage/polyadenylation specificity factor, A subunit, C-terminal), IPR018247 (EF-Hand 1, calcium-binding site)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X0K9" /db_xref="InterPro:IPR004871" /db_xref="InterPro:IPR011047" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR031297" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:A8X0K9" /protein_id="CAP26169.1" /translation="MPISYCVSAKKASVVTESVVGNFTGQDNVDLIVARGNRIDVQLV TPEGLKNICEIPIYGQVSTISLIKFRREKQHSLVVVTDKFNLAVLGYRDGKVITRAAG SIAEYSGRSADTAVAMTIHRSGLIAIIGYEGSVKMVHWEPGADVRHFNVRFDYPNVSD FKFVDTGDDDTVRVAFIYDDDHGKHLQFSDLNMHDKEFHTFSKQSCIAADSQVLIPVP APVGGVIVLGANSALYKASDVNGDVVPYSCSLLKNTIFTCHGIVDASGDRFLLADTDG RLLMLLLNIGEGRSGTTVKEMRIEYLGETSVADSVNYVDNGVVFVGSRLGDSQLIRLM TAPNGGSYSVVLETYTNTGPIRDMVLVESDGQPQLVTCSGADKDGSLRVIRNGIGIEE LASVDLAKVIGMFPIRLRSTTDNFVIVSLPDETHVLKITGEELEDVQLLEIETERTTM YASSLFGPDDSELILQVTEEEIRFMSFQKQVKIWRPTNGESVSKVSVNAIHGQIVVAA RDTVYYLKCMVDEAGALDIQIVAERKFEAEIACLDISNEGDDYKKPGTFMVLALWGSF SMEVVQLSDLKTACQTNLPSKIVPRSIVATCIEDVHYLLVAFGDGALIYYVFDIKTGT HGEAKKSSVGTRPPSLHRVRNKNRQHLFVCSDRPVIIFSANKKLVFSNVNVKVVNTVC SLSSTSYRDCLVISDGNSMVFGTVDDIQKIHIRSIPMGESVMRIAYQKSTGTYGVCSS RSETKPERVYASKNALANSQSRAKIVATRNEVNDGPPASTSSFMILDQNTFQVLHAHE FGPFEAAVSCISGQFSDDARQYYIVGTGLIYPDESDTKLGRIIVFEVDDVERTKLRRV HELVVRGSPLALRILNGKLVAAINSSVRLFEWTADKVLRLECSNFNHIVALDLKVMNE EVAVADLMRSVSLLSYRMMEGNFEEVAKDWNSEWMVTCEFITAESILGGEAHLNMFTV EVDKSRPITDDGRYVLEPTGYWYLGELPKVMVRASLVVQPEDSTIEYSHPIMFGTNQG TIGMLVQIDDKWKKFLVSIEKAISDSVKNCMQIEHSTYRSFIFQKRIEPPSGFIDGDL VESILDMDRSVAIDILKKVSDKGWDASLPRDPVEMLKVIEDLARMH" assembly_gap 760332..761066 /estimated_length=735 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(761367..761546) /gene="CBG26300" /locus_tag="CBG_26300" /standard_name="CBG26300" /product="Protein CBG26300" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG73" /protein_id="CAR98903.1" /translation="MPEKMENKRFSEFEKKCFRGPRETPQIPGKKTPGKSGRSRGRSL KCNPGTVLPHGFFAH" CDS join(761581..761797,761844..762069,762116..762667, 762714..762918) /gene="CBG06233" /locus_tag="CBG_06233" /standard_name="CBG06233" /product="Protein CBG06233" /note="contains similarity to Pfam domain PF02190 ATP-dependent protease La (LON) domain contains similarity to Interpro domain IPR003111 (Peptidase S16, lon N-terminal)" /note="Predicted" /db_xref="GOA:A8X0K8" /db_xref="InterPro:IPR003111" /db_xref="InterPro:IPR004910" /db_xref="InterPro:IPR034750" /db_xref="UniProtKB/TrEMBL:A8X0K8" /protein_id="CAP26168.1" /translation="MNQENDQELNGVNNDNRNERDHLEGFNPSAAHRFDYTLQDNENR ENYKNEAKLVDYGTNWFPICGVSAVCFPEQQLPMKFDEDEQELYDRLVASARANGFVV LFPSDIRECDTLPYVATLSKVVQANPQTFSMELMGVHRCKVLSYNLENGEAFVQLLPE VEIPALLPKHLPKYSRRYSMYERRSLATRITGYPFDSLRDISRNQAEQCCLELKGMIG EEILQQALNRGLTYFSYFISQQIFSNRETEYSLLKEDSANTRIAAALKYCKVSIGKCR RCFAPIFLNENIMRLPEQTMTHVIAHGFVHKITLLSSITNYVRASAPSYEFTWFPDYA WIIIQCVGCHQHLGWEYMSMTREPQRFFGIQREGVQFENDIAEERDDDNSDPTESSDS LSDEESD" CDS join(764031..764241,764288..764407,764456..764547, 764949..765075,765120..765292) /gene="Cbr-aly-3" /locus_tag="CBG_06234" /standard_name="CBG06234" /product="Protein CBR-ALY-3" /note="C. briggsae CBR-ALY-3 protein ;" /note="Predicted" /db_xref="GOA:A8X0K7" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR025715" /db_xref="InterPro:IPR035979" /db_xref="UniProtKB/TrEMBL:A8X0K7" /protein_id="CAP26167.1" /translation="MVKANNVDMSLDDIISKTRKTNSSIQKKPFSGNRRGNGRPSGIP RRSGGSSGGWRDLDAVSNHGITSRGNDSKIIRVNISNLATTVISSDLEELFGDYKLHS VSVNFNEHGESLGTGDISLAKRDADRLVQKYSGVALDGKMMKFAVIDSSNIAGRVDFG NRSRSSQGSSGRGFQSGPRRFNRKPEDFLRDGVHEGDTKRGGSGRGGFRKGGRGDRDS KPKKTEAELDAELEAYMAKRNA" CDS join(765660..765782,765834..766119,766202..766510, 766560..766771,766815..767177) /gene="CBG06235" /locus_tag="CBG_06235" /standard_name="CBG06235" /product="Protein CBG06235" /note="contains similarity to Pfam domain PF01529 DHHC palmitoyltransferase contains similarity to Interpro domain IPR001594 (Zinc finger, DHHC-type, palmitoyltransferase)" /note="Predicted" /db_xref="GOA:A8X0K6" /db_xref="InterPro:IPR001594" /db_xref="UniProtKB/TrEMBL:A8X0K6" /protein_id="CAP26166.1" /translation="MGDNVVEAPNWPAPVAEVGEKTVFQRMFHFGTIFAFSTITMIGA VTTFFSLQWMPVNSYIGLFNTLAFLLWNYLTIGNLFNASFFGPGYVPRGWKPENKEHE KKLQFCVPCNGFKVPRSHHCSKCNRCCMKMDHHCPWINNCVGHRNHQYFLRFLFFSVV GCIHAVIIDGSAMYHAFFAGWYQRYGDGTEPIIFLTPISFVAVIFAFAMACAVALALT FLFITQLRYVIRNKNGIEDYIHGKSLNMRKILDEEDEEEVEWIRSLGEWKYPYDLGWK RNLSEVFIGIFDGRTKGNGTWWPVIKGCSQFTFTIDQLLQKQSKRGRARIVDIGEDFE GKCCSSRKFGWKIWMKQPIIDGKCLKVSEGETIIATRGVSGWVYGFRESDTRNKGWFP IAITNLKRNGDPKTEQTASSEEDVKTDDTLSSEEKKDQ" CDS join(769661..769750,770367..770417) /gene="CBG26299" /locus_tag="CBG_26299" /standard_name="CBG26299" /product="Protein CBG26299" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG72" /protein_id="CAR98902.1" /translation="MSTTTRPSLPSQTSLPAHSETLTPPIFAGRFYTLFLFSSSCVSL TL" CDS join(770573..770704,772415..772527,772633..772745, 774790..775012,775275..775365,775417..775560) /gene="Cbr-lin-24" /locus_tag="CBG_06236" /standard_name="CBG06236" /product="Protein CBR-LIN-24" /note="C. briggsae CBR-LIN-24 protein; contains similarity to Pfam domain PF03318 Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 contains similarity to Interpro domain IPR004991 (Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2)" /note="Predicted" /db_xref="InterPro:IPR004991" /db_xref="UniProtKB/TrEMBL:A8X0K5" /protein_id="CAP26165.1" /translation="MNHVDVDQILEDYAWHQFQDVQSLRKTRIDDFRGIDRDDCEFVI NRKHLVVVSEDPQYSHFQPVGSKPYTLFKSIYTNSTNRPQEYSFKTERTTESLCSVAR EQGYTIGAEAELTLKTPCEIAELKAGFKHEMHFNNLNENCQTEILSWGVDSNVSVPPH YMTEASIIIEEMNYRGSYSVVSRLSGTVVVSIRRRRDNALIMPIRVAIAEVFRAQLDS PHCKKEVKQVVSIDQNRVVRLVSKGSCQFQFAMKQRIDLKEQPMRASDEIMID" CDS complement(join(775977..776081,776335..776653, 776874..777073,777124..777183,777236..777298)) /gene="CBG06237" /locus_tag="CBG_06237" /standard_name="CBG06237" /product="Protein CBG06237" /note="contains similarity to Pfam domain PF00485 Phosphoribulokinase / Uridine kinase family contains similarity to Interpro domains IPR000764 (Uridine kinase), IPR006083 (Phosphoribulokinase/uridine kinase)" /note="Predicted" /db_xref="GOA:A8X0K4" /db_xref="InterPro:IPR000764" /db_xref="InterPro:IPR006083" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8X0K4" /protein_id="CAP26164.1" /translation="MKHTLKLPLIIGVAGGTSCGKSTIVERIIENLDANAKQSGRQIE IVHLSLHSFYRELSNDEKNLAKEGKFNFDHPDQINFELLVDTLQKMIDGKSVEISKYD MISSSMIGTDKVEPAKVIIIEGILLLYDERVRKLLSTKLFVEKNAESRLRNRIDTYMR DYHRNPLSIIRQYTEFVKPAFEEFCRPTKKYADVIIPRGADNHVATDLIAKNLQETFR KIVVSSDEDEEKENDFVKQGSIRRPFSRPH" CDS complement(join(777554..777670,778927..779019, 779064..779582,779617..779835,779884..780010, 780056..780183,780261..780488,780533..780665, 780707..780819)) /gene="CBG26298" /locus_tag="CBG_26298" /standard_name="CBG26298" /product="Protein CBG26298" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG71" /protein_id="CAR98901.1" /translation="MDLRTVEAIIRRNSTDVGAYFGFSDQISRDIIIDYSYVFRPLGI DLVGKWVRVVVRDPNVVCRPVVIIDDILETRLLNRDPEIRIEASYDSRFKNKYEVFHN NFAGFIIDTDKKVQHIDTRATYSLWITRLHQPGLKASWRVSQDLTLRNTRRVSTQNAR DGQQLLRTVDAIVHSVSRDGTGYTAWTRTEKNRITIDSKLCRGYESILGRWVELTLDH YNFVKEDPVLLPDVFETQIKKGITRIRIDFQSTADSEKTRLFYNSYFGNIYDQKQNVP PGENGSWYRGWIIFYLRSGLDTRWRLCNFQNVEGPFVSFTSNNTNEPGTSSGGYDNKN HQEYIRSSSDFHRSESPRKISIERFDDEQQYQRRTSEEWYPSNTIWRPSEPLEDRNHY INDRNSPTLHAFNLDGINQQNDDDTRLNRKEIIYPKDKKETTPLSEEEYYTCSEDGGG NYKTTQAPRMVGRDSISPSGPSSVLYGITENETIDRIGEESTGNNVQESTSSRRLKPK TEKEIELTMLKEDFIRMSVLIRSLTKKGSVAEKMMVANFEDYEELMKLIR" CDS complement(join(781254..781406,781516..782010, 782210..782410,782456..782582,782629..782753, 782789..783022,783067..783190,783235..783347)) /gene="CBG26297" /locus_tag="CBG_26297" /standard_name="CBG26297" /product="Protein CBG26297" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG70" /protein_id="CAR98900.1" /translation="MRRETLDAFVVRYNHEERTYSAFCSQNNPEITISQQFVPPNTDL RGRWIQAEVFKNVVTGNIFIISDVFETRFVCGEPEIRVEAVHNGLLQNGIATFYHQTI GFICDSDYVINNPQSSMIYTLWIRPHKEENVMSYWKLSIEQRTIFPNRPEVSSTNVKA DEKLRTISGIIHSRTDQGVYIAWSKDEPTRRFYIWDSNCPRSGNMIGFWVEMNVDNYF EVQGSVVRIEDPYKTRIIDNVLEINIDFESILSGGAEVFYHPYFQYICDPRNVFQGRP RSGVRYNGWIAYDGIEGTNAYWRLVNDSYDKSLQNDRKSQNEYYSQERIRSPPHIPNQ YEDQYTGHSQKTPGNFPSQWDREHERGQQYERVPSSSSSFVQPIVYSGEQKMNRKESR KKVSAPPRSDSSDSDSDDFEGACCFYETPNQSINGNSQAVHHADEVPENQETSGQQKK NARRIQTKETKTAKELERFKLKSELILMQNALTLLMKDEKCLAVCKRAELEDHEDLMA LIHMRMNKDKIIDIA" CDS complement(join(783645..783770,783814..783912, 783964..784707,784753..785140,785186..785298)) /gene="CBG06239" /locus_tag="CBG_06239" /standard_name="CBG06239" /product="Protein CBG06239" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0K3" /protein_id="CAP26163.2" /translation="MGRNEVVTGFVIYDGRNGIYFAWSSVSNNDIIIDYKYSPQNMNL LGKWVSVAIDDNLEACREASIILDRYETRIFKSKAEVSDINHNEFKFFSQLLLEVQHD GCYRNRMEMFRHHDLGLIADPEHYVRDVEQNVSYRVWIACNPDSELKRDIGARWVVVG LSEKMDLTRQRSSTQSTDYNSEPQSNDRSYGRSSQVGRRSSPENYSNRRSRSPERSSR FGPRYNTDDRQNYDHRNQDNYGYNTGPPVMLGNRSRRSPSPRNRYQDFLSRDRQNYRN DGGSYQNRPSAHQSPNRSMQNEPYASNQNSHPDSRRPASSFMNQSKNSYCPSPSPSNR SSDYAARREIALQSPKIPSSGHSVPHQRKNTDSPRPPSRAETTSEEDTDNEIEDRSSQ KSKISSKQGNLIQNNEPIGEHRQVTDATKISSDRIKSRGFIRQLTPEEEEMKTLRTTV NDIKALVKNLVRHPEVIEAMQVANLEEFEELIEIVERKE" CDS complement(join(785531..785659,785707..785802, 786042..786413,786455..786658,786707..786836, 786882..787078,787164..787292,787322..787442, 787493..787632,787683..787694)) /gene="CBG26296" /locus_tag="CBG_26296" /standard_name="CBG26296" /product="Protein CBG26296" /note="contains similarity to Interpro domain IPR018247 (EF-Hand 1, calcium-binding site)" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IG69" /protein_id="CAR98899.1" /translation="MDSEDDEWHTSYAMSSVPKKMFFVIIDKGISAMLENDRNVKLGS FYEVKYAFNGKATPENRAQHVITQYRPIKPLAQSHVDTDDRGLQHVIFSVFFFLQITT SAEYVGLVNAGNKRVAKLYNDTFGNFIDLFDLCTSSKADKFRSIFVPRRILAYHDLPE KIPDIRRIIGFVCSAPQRDGSTFVWSKYLVKNAYLDIQYCRPNENVVGCWVDASVDVS SNRVVEVVDVIRDVFDSRVCQGVPEVRASFTYHGFDDRKGCRVYYHDDFRHIFDYNHK VKYNPDAGWYRGWISNPDPESSDFWIVSSQQDVVFAEDLIRELSPEPISRNTTGLPYR PAGSVNEEIPIPGSPTSFRPVDRSIDARRETPRASFRAQTSSDSDGESLAPRELTNSS LADDVAPGRRRITATRSNNILLSSDCDSDYNLERRVSSSNHAQKKESFDAPVDGADRS SNTVDASIKDNFESLRQKNSRICALVKSFTKDESVSFSMQVWSNEDYEELLSLVNSND E" assembly_gap 788380..788389 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(788755..788993,789038..789402, 789449..789738,789787..789909,789961..790231, 790276..790376,790422..790820,790867..791602, 791656..791786,791829..792003,792050..792102)) /gene="CBG06240" /locus_tag="CBG_06240" /standard_name="CBG06240" /product="Protein CBG06240" /note="contains similarity to Pfam domain PF03312 Protein of unknown function (DUF272) contains similarity to Interpro domain IPR004987 (Protein of unknown function DUF272)" /note="Predicted" /db_xref="InterPro:IPR004987" /db_xref="UniProtKB/TrEMBL:A8X0K2" /protein_id="CAP26162.2" /translation="MIGLAAQRKPNGSLIVVSPKDGIEFDIDEDLLNKNIVKLGSFCR IEVENNVPVSYSLVKKYGTGKIEAEVESDSVQINGITGILSSKLALFYKTKDFGEVAC KDKVAGQIGTKHQLIISRLPENQRTGLYSRFVWQGVSDGIVEKVGKENAIEAKKTNKN SIPEEVNDEKDEEKAKVAKSGEKMPEKKHIFGFVVGKNQREQSRYVFCNLTYPGADGK VFCNKNNSVDVGDWVRLEFNKKEFSKYFPTNPKANTPTFSILTWRKIPDPRNYKVSQH GEVLEVRIKDYALPANHKSGDSIEDNYLGLVDDGNKMIRKGSETVDLVIRRRKPFRTS DGKWTVWFVKESRKSTSRSESPFSTERSSSNFQDSRTSRKTNKNQKKNEMKQNDRFLK EGSSQSKENGLAHGNNNNCAYPPGFFFGPPNINWQMGHPNPVGLIHAMGGAMSMGSVA AMPGYPGFVYPQAFMPPLAGCPPPFPKSERNQEAPRKPNTERVLKGEPVRKRAVVTSI KQNFGCKEKEKSQRAFLWLLDDHRQSVLLTSGEVVQERNNEKVKLFPGYFFDGVFQQD EEDRWECTRHMTRLGKLLEGSVHNGALEFQFVVNDYFPQSAERLNPETFHSFIGKIID KENKLPKDCSSGVRIGIKLWNLPERGEWCWVVSKVFQSSKHVQLLMEFHQAWHKPGIR DVIRHESIKEFLLLQDLMDTKAENDEEHNKELIDNKDWKYAWVVVHDGDFIRMLVFPR VKGQGMNLMKKNVKEKSVYRKVKNMKANRLYRAKLNDVGDVVEMIDCEQHFYADKYGK IQFKIVSTDDLLLAKNVAVVEPIGVPECFGKLIFCYPDRPITKKKVLMQTTFRILDDK DAFSDNELVQTAGVCFINTGDPVEKLPNQNLEEVMESERTFSERKLENYKHNYFKNKL LVLHPKDEVFPMFKAVCSILRSTQILKELKKQDIDTHRLIKLQASI" CDS complement(join(792583..792668,792718..792832, 792886..793107,793154..793320,793368..793449, 793529..793764,793815..794496,794555..794806, 794950..795108,795154..795393)) /gene="CBG06241" /locus_tag="CBG_06241" /standard_name="CBG06241" /product="Protein CBG06241" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0K1" /protein_id="CAP26161.2" /translation="MSAAKCPSLPTDPLAPCTVTFVTQNDRANEPPPQPRVRKVTTII NTLGVIVEDNETEVGVWVFTACEKKFFPKADQHMFIGIHLGTWIIVGIYPDGTVASYS PWPLLLQGYETKVIENQLLLKICASDMQHEKRDPQLTAEFYRIPGLGRVLAPTVFRSN LEDKNGRLSIWIQYCGRVVRECSWMVFYLEEKSHDGNEYREKELRVISEFIKEKRSQL EILRCPDKYMSRNLGLITEVHSSKHTLNFWSPFVPIETDHTARIPQPPKHREVESPML DPMIGQWIQFDVHSKDLEKYIGTKPGFRLQVQEYLPINSPCGIGVVNVNKTIRVSHRS VFDSQHCLIFQVAISCILVTGTDHPMLYQLPTFGFVIDRNSTLVSGAHMQLILEKISP KLRRSSSACWSVISSKVVNFSDVTVEKVKDMQTEAIPLKDAMEPCHVMSIEKQNHASQ SKPQQTLHVAVPMLSASVNTGITMLKYQQPQSQIQYLHQGRDYYIGNTIRLPSNYSSS TKKFTKSRVFLENTLEGHAIVEKYIPERQAGILWLFDNFNTSVHFIYDEFEFEIGDYV YVKLEKKSDPMQQLGFRWLWKSGVKKEAPFNCRVNKNQIYIETKLTLGSPNRQNRTTY TSKYFPTVLDVEGCIPTPTVRLSRKLKINLIYFQAGVTYSAVIYRKRITDPVTDIGRF QWTIYALQGTSYIVADYYHSNYQFHNRSNLKNVPPQNVGISSASSEHSSTSPPLKRSS ITSDES" CDS join(801002..801073,801125..801186,801235..801397, 801445..801567,801611..801723,801773..801908, 801954..802035,802084..802348,802394..802522, 802571..802778) /gene="CBG06242" /locus_tag="CBG_06242" /standard_name="CBG06242" /product="Protein CBG06242" /note="Partially confirmed by transcript evidence" /db_xref="UniProtKB/TrEMBL:A8X0K0" /protein_id="CAP26160.1" /translation="MSLREEGVVVSLSGSRFVLATKFGTIYANNDEPVKLGDSVTFHL TTTLKPCFGINIKAQSSKFPTKRFTEKSVLVQCEIKRNIDGTVNGKRIFETNLLPVVQ EGHFLGNNTNSFIKKTVWVKFCGNETKSKWEIQEIVKNDNDIIEILGIVYHEKIEINS ARVYVPGYPEDFVLRKTSSFRPSTALDSWVSFGVSSSNCNVDYTHPIKLQECPVEWET QKGSLIRSKCSRQRNTIQTCFGDIVSDPNDELGRLNISGDFENKRIWIHLSSNFNNKP NFVVHQEKRTSNGNQVRLEHRQQTHQFVDYKKPAKKTSDPSGGRPRGAPTPRLTLSYQ DEPTHYNSSSNDMPPPPSRSSSSNRRSSPPSGRQRTTINGSNFYTRDESSFTQEVPRS QSPPPPRSPQEYEEVIAGQQRKINALRTAFLQETDLGLILQLHCPSFLHQLENLIFQN " CDS join(807027..807173,807219..807404,807451..807843) /gene="CBG06243" /locus_tag="CBG_06243" /standard_name="CBG06243" /product="Protein CBG06243" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0J9" /protein_id="CAP26159.1" /translation="MSRRFALIALLFSVSFAQSTTQQSQQISLDPNAGSLKLRIVFQP DQQPQVQQSPCSTGNCQSTPTLSPCASGNCGAIRQPVQASPCSTGNCNGPVAGSANIV PANDVSTYTTTTPMPVTIRTAPIVTSNTASIKVIRIPSYSNSYSSGCFSPPCGAPRFV FAQPPCFGNSCGPRFMFPRRRHHFFGGQRPIIIGNRNNGNTVNGGNIAIPDTIYRNGQ AIRAPIRVPSSYQDGNPVFNTGK" CDS complement(join(808111..808214,808734..808838, 809000..809127,809174..809294,809337..809549, 809598..811016,811065..811715,812056..812116, 812254..812361,812392..812669,812721..812862, 813015..813184,814671..814765,815048..815073)) /gene="Cbr-nlr-1" /locus_tag="CBG_06244" /standard_name="CBG06244" /product="Protein CBR-NLR-1" /note="C. briggsae CBR-NLR-1 protein; contains similarity to Pfam domains PF00008 (EGF-like domain) , PF02210 (Laminin G domain) (2), PF00054 (Laminin G domain) contains similarity to Interpro domains IPR001791 (Laminin G domain), IPR006209 (EGF), IPR000152 (EGF-type aspartate/asparagine hydroxylation site), IPR006210 (Epidermal growth factor-like), IPR001881 (EGF-like calcium-binding), IPR013032 (EGF-like region, conserved site), IPR012680 (Laminin G, subdomain 2), IPR012679 (Laminin G, subdomain 1)" /note="Predicted" /db_xref="GOA:A8X0J8" /db_xref="InterPro:IPR000152" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001791" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR013320" /db_xref="UniProtKB/TrEMBL:A8X0J8" /protein_id="CAP26158.2" /translation="MSFSVVSQRHLLHTYAIWIRMRRRGLCLQLLLFFIYAVSQCSAE CSDVSFSSVASKLDGLKRVTRLSVSGHISAYHVKVSISDDDFQLVRVSNGNPLVLYST LSNTPSWTHVDFLASEVRILPAFEQATEDVRGPLLILTVCDYDTPITAFDDSSYTVES HHAGLVSMYENDLCVVFRTYRSGVFFFSMADQGDVLIAQIIHGTIHVIFDFGSLTPSR ISAGKALDDGRWHEVFLDRLRWLHQFDSVQLSIDGVLLNQTAPTGLYRKLDLHSVVHI GGRPADDFSQGIETTFTGCIARLQLNNADLLQLSPSEVHSQCQMPKPPSFTLHNASRA VLPFTFLPFSFEFRIVPINGRLVTLFDAENGTLVDVVVDEEKKLHLVSNITKFKQAAN PAIDVANGAWHSFSMRIRGVRMEIDIDGYTVLWLEGHEVRRISQRLSNFILSASGCYR SATIDLTSVRVDGNVTRGECTFQEKCLPNPCENGGGCVQSALDDYVCNCRDGYKGKNC HTTDLPHSCEEWVFTKGNKQKAVQGRTVLIDIDGGGEMQPINVTCKTERDELGVDGVS TILEHDLIRPMIVTGDNKPGAVRYSLTYGISIEQMDRLVEGFEACSQFMRYTCRGGVR LMTQGDERSPSSWYSTRSDKHGLQWGEAPPYSRMCSCAINGSCLHNRMCNCDSGEDST DEGVNPYSQLLPVTGLFLGGTTKSSSIEVEIGPLKCRNRATFDPVTFSDRNAKLSGTQ TFNQRTFDVSLHVKFSHSQMSILSWHSTDDLHWFHLYVNDGKIVGEVVNGGESQQIVS DHRYDDGKFHAIYWEVDSTGMFLKVDGQRKSLKTSFVLPTVYMWIVGSRTEKGSTGFA GVIRNVYLCGVELTLGQYARKETERGIALGDDGYCRPDLCQNGGQCVDKYDGYVCDCS MTPFGGSDCSKEYGMMVPAGSSIQIPWQNPAHQSMCHRIAIQTASRNTTILRSKALFA DSTFNMTVDDNGNLQMMAYDGFFFHFKRNSKHHNLSDDVMHDISFCASKHHFNVSVDG MQVITIEGNWTFFESFNVWHFLDENFEGCVSRVQTGSAFPLKSPKTARLNYSGKIRFG TCPIEAVSRQKMYDFSPQQEATSSTMKTSTEDIKIFSVSQAKQDLMSKAMVGGFFALL IFIVCMSALICYMRTQPEGVYKTNETGENCSPSRSEEPLVHNGNNNNSTPMYASNKEY FC" assembly_gap 808877..808926 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(820681..820914,820963..821126, 821173..821332)) /gene="CBG06246" /locus_tag="CBG_06246" /standard_name="CBG06246" /product="Protein CBG06246" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0J7" /protein_id="CAP26157.2" /translation="MGRGSAHSRVDKREIFVYRLLQFIGVGADAHFIPSAYSRCYTSA LALHIATKRVQGFQKKRALRSACPFTDEHQMRLDLIRNLLYLGDLNSRNYGLDDKHQL IIIDFVVLPQESCIHSATLFGQRLDHPSLNMIIKNWKLLENFTKATESIANDCKRMES IIWRDGYDKYLKVVLENIKLLNNML" CDS join(822149..822249,823656..823968,827018..827101, 827147..827363,827622..827722) /gene="CBG06247" /locus_tag="CBG_06247" /standard_name="CBG06247" /product="Protein CBG06247" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0J6" /protein_id="CAP26156.1" /translation="MEKKKEKNIIKDNKNKSKRIENFVRNSKRKKTKKQFESYNIPNG NREFTWKLGTKYDKIKYIVIAFQTARDNNYLNAAKFDNCGLEEIYVELNSERYPYECL KFDFDKFNAVQQYNFAKEFRNSYYESVKDYIFMEEDAVGSYFRKYFANEALSITFSPK PDTGAQGGFIVHVADADYFVKNHTFMGRGSAHSRVDKREIFVYRLLQFIGVGADAHFI PSAYSRCYTSALALHIATKRGTTPRKLYSQCYTFWTATRPSFTEHDYKKLEAA" CDS join(836719..836892,836943..837004,837056..837215, 838708..838758,840386..840504,840554..841136, 841187..841252,841299..841862,841914..841991) /gene="CBG06249" /locus_tag="CBG_06249" /standard_name="CBG06249" /product="Protein CBG06249" /note="contains similarity to Pfam domains PF04777 (Erv1 / Alr family) , PF00085 (Thioredoxin) contains similarity to Interpro domains IPR006863 (Erv1/Alr), IPR013766 (Thioredoxin domain), IPR017937 (Thioredoxin, conserved site)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X0J5" /db_xref="InterPro:IPR013766" /db_xref="InterPro:IPR017905" /db_xref="InterPro:IPR017937" /db_xref="InterPro:IPR036249" /db_xref="InterPro:IPR036774" /db_xref="InterPro:IPR039798" /db_xref="UniProtKB/TrEMBL:A8X0J5" /protein_id="CAP26155.2" /translation="MRSPRGTMSTTATISCLLLFTVLPTTVEAVQSTFNYVPIGQNPT LYTPGFEPIMHLDQMTFNDTVFSDRAFLVEFYADWCGHCRAFAPYFRQFANMVRDWYP VVTVAVINCADSFNQAACRENGVTYFPMMKPSAPPPPPPHYTCDSLSYFARTATTATQ GKLFETPHSAEQIRDTLLRTVSNEYMFNRYPDWPNLGHIAVDSRTTYGQLWDGVPPKA NYMAILFEEYDGVGAQFVMDLISRNHILGARRALSNSPLVQMLNIRNFPTVALFRRDH QQALYMQRYNNQTVKDLDDAITSDMEQGGRRAPILTTTYAPTTTTTQTPLIDCHSYPE RCRDMYYVSETDMLKAMRMALLDEVTRVPGSIRGDNFTNLHEFMTLLSNHFPVLSFQN DVRRMRAKRTTSVILRNSERARLVFTHMREFLEGRKSIGSVTADEYRRQFESVERVYA SPFPVNSTWQHCKGSSPQYRGYTCGLWTTFHALTVHTYIDTIKDDFVNPMKPLSTIQG WVKSFFGCEHCRNHFMHMTTTLFPLNERRVRHPHDMMTYLWRAHNIVNNRLHGDTTED PQFTKMQFPAPFLCPTCHSGGQFSRRQIRNFLLRYYGSIKPHNRLADQRLAF" CDS complement(join(842967..843308,843363..843540, 843591..843670)) /gene="CBG06250" /locus_tag="CBG_06250" /standard_name="CBG06250" /product="Protein CBG06250" /note="contains similarity to Pfam domain PF00857 Isochorismatase family contains similarity to Interpro domain IPR000868 (Isochorismatase-like)" /note="Predicted" /db_xref="GOA:A8X0J4" /db_xref="InterPro:IPR000868" /db_xref="InterPro:IPR036380" /db_xref="UniProtKB/TrEMBL:A8X0J4" /protein_id="CAP26154.1" /translation="MAARKLIARINPSNSALFVCDLQEKFASNIKFFPEIITTSRRLI DAARILSIPTVVTEQYPKGLGHTVPLLKEGLAENTPIFDKTKFSMCIPSTEDVLKNVQ NVILVGIEAHVCVLQTTYDLLERGHNVHVVVDAVSSRSHTDRHFAFKQMEQAGAILTT SECAILGLVGGSDHPKFKEVQKLIMTSAPDTGLVPLSKL" assembly_gap 844494..845232 /estimated_length=739 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(845704..845820,845872..846156,846213..846344) /gene="CBG06251" /locus_tag="CBG_06251" /standard_name="CBG06251" /product="Protein CBG06251" /note="Predicted" /db_xref="GOA:A8X0J3" /db_xref="UniProtKB/TrEMBL:A8X0J3" /protein_id="CAP26153.2" /translation="MKSYFQANFPLADGTIYMILVLVAGSFVYMKRMTEIKSEADLRV KMMSANIDELIQDHDEELLYEKKIAATHVIKMRMQKREFSSKLGGLQRKLKKQNETVN SLNSKLVSLEWAEEDANELVEEVMNARVKLRQKDELIEALKKQLSFYQQDVAVSSQQP LKPIQPRGRINQENIAP" CDS complement(join(846808..846990,847043..847141, 848033..848098,848307..848360,848409..848508, 848643..848713,848963..849205,849251..849472, 849520..849937,849984..850069,850114..850191)) /gene="Cbr-phy-2" /locus_tag="CBG_06252" /standard_name="CBG06252" /product="Protein CBR-PHY-2" /note="C. briggsae CBR-PHY-2 protein; contains similarity to Pfam domains PF08336 (Prolyl 4-Hydroxylase alpha-subunit, N-terminal region) , PF03171 (2OG-Fe(II) oxygenase superfamily) contains similarity to Interpro domains IPR006620 (Prolyl 4-hydroxylase, alpha subunit), IPR013547 (Prolyl 4-hydroxylase alpha-subunit, N-terminal), IPR005123 (Oxoglutarate/iron-dependent oxygenase)" /note="Confirmed by transcript evidence" /db_xref="GOA:Q1M2W4" /db_xref="InterPro:IPR005123" /db_xref="InterPro:IPR006620" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR013547" /db_xref="UniProtKB/TrEMBL:Q1M2W4" /protein_id="CAP26152.3" /translation="MRTVAIVCLLAALANADLFTAIADLQHMLGAEKDVTTVIDQYIA AERARLDDLRRYAHEYVHRNAHAEAVGPEFVTNPINAYLLIKRLTSEWKKVENIMLNN KATTFLKNITDNRVRSEVKFPGEEDLSGAAIALLRLQDTYKLDTLDLSNGIIGGEKVS NKLSGHDTFEVGRAAYNQKDYYHCLMWMQVALNKIENESPPSVEESEILEYLAYSLYQ QGNVRRALSLTKRLAKIAPNHPRAKGNVKWYEDMLQGKDMVGDLPPIVNKRVEFDGIV ERDAYEALCRGEIPPVEEKWKSKLRCYLKRDKPFLKIAPIKVEILRFDPLAVLFKNVI SDSEIEVIKELASPKLKRATVQNSKTGELEHATYRISKSAWLKGDLDPVIDRVNRRIE DFTGLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYMSQP ERGGATVFNHLGTAVFPSKNDALFWYNLRRDGEGDLRTRHAACPVLLGVKWVSNKWIH ERGQEFTRPCGLEEGVQENFIGDLSPYANDP" CDS join(852766..852860,852905..852939,853022..853093, 853139..853273,853317..853412,853679..853774, 854190..854291,855422..855699) /gene="CBG06254" /locus_tag="CBG_06254" /standard_name="CBG06254" /product="Protein CBG06254" /note="Predicted" /db_xref="GOA:A8X0J0" /db_xref="UniProtKB/TrEMBL:A8X0J0" /protein_id="CAP26150.2" /translation="MMIDRRNKRSVQIFFLLITFLVCSGVFFWYYSHPEDDVPDYFPP EVKEHQKTEREAALEKVRQLQQNGLENAAAETFYDDQSKKSISGNPDNSGYENARILF QKLNTTIVQESPLNENGEKMTADSFYDEKLKQKQEEDKDFNQQKTSEEAENADHAVHP DPSVNEQHKQEAVQKTKTTSEKAESADPPVQPDPSPNEQHKQETAQNSNTNDKSITKD EKNAFDVIPKNDTASLDIIGKSEAVQSWLAKKHNSRTRSLSEVESSLRVDQAAQMSAR RNPKFEAVDPEIERLQNQVHQFKFVQ" CDS complement(join(855749..855821,855869..855987, 856202..856822,857120..857188,857233..857541)) /gene="CBG06255" /locus_tag="CBG_06255" /standard_name="CBG06255" /product="Protein CBG06255" /note="contains similarity to Pfam domains PF07647 (SAM domain (Sterile alpha motif)) , PF12796 (Ankyrin repeats (3 copies)) (3), PF00023 (Ankyrin repeat) (2), PF00536 (SAM domain (Sterile alpha motif)) contains similarity to Interpro domains IPR021129 (Sterile alpha motif, type 1), IPR002110 (Ankyrin repeat), IPR001660 (Sterile alpha motif domain), IPR011510 (Sterile alpha motif, type 2), IPR020683 (Ankyrin repeat-containing domain)" /note="Predicted" /db_xref="GOA:A8X0I9" /db_xref="InterPro:IPR001660" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR013761" /db_xref="InterPro:IPR020683" /db_xref="InterPro:IPR036770" /db_xref="UniProtKB/TrEMBL:A8X0I9" /protein_id="CAP26149.2" /translation="MSGRVRFQERPGITYVPSSRYGNAPLLADIISKPMPQLHHENRY DMDACTAASIGDEKELRKLLKINPNTMIMKNQSGWTPLLYAAYLGHNNVVAFLLDSGA TVDDSTNGRWQTPLMMASACGNLNVVRLLLERGANPKICDKEKRQAIHYAASCCQNVV VDTLLAAGCDPNAADSQGTTAVHEAAMAGHEVTFISLLEKGGNVDQKNLKGENAATLA CDNNKILQLISDHQAENAKQNPQIIPGNRVTRTLSELLEEMDLGRYVEQFKSENVDLE VFFELKEQDFKDMNIAYGPKKRMLDVIKRYKTTGVIRSDAFDSPQPASTSPRGYTSHA GDDNEKINGTLRSIRDLNQETKTFVMNALESLGSGDANRLRGQLINILNNVESIGLKV SSHV" CDS complement(join(857792..858032,858075..858208, 858254..858429,858475..858884,858931..859001)) /gene="CBG26295" /locus_tag="CBG_26295" /standard_name="CBG26295" /product="Protein CBG26295" /note="contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (7TM GPCR, serpentine receptor class e (Sre))" /note="Predicted" /db_xref="GOA:B6IG68" /db_xref="InterPro:IPR004151" /db_xref="UniProtKB/TrEMBL:B6IG68" /protein_id="CAR98898.1" /translation="MYTNGTYPIFVVFYITIIILNSLSILYYIFNLFVTFRVKHYKTN IQILHQSIYATCPFTSIFIITDASINILGKREFYFPMTIVVLRTLLSCPRTKNRRDMK VIDSEISALFALFAIMLERLCATYFVADYERNQRPIIGYSIIFLTLIVSAITSYIFMI PNLVLAFVAGHLISIVICYFVSLITYRINRKYFYQNRVHRHSYSLGERYQISENIRLY KFFSHYLFVLAIFPLICTFVTLVDHLDSNPMHREVYEILFDLSYTFLCILAPYLTYKM SDPWQAELESIFMKLGIRKSNIIHATRSSQKTVRGTFGEEMNVETSKHTDVYFTQLKS SWNLNNNQG" CDS complement(join(859974..860144,860189..860267, 860314..860444,860492..860667,861254..861409, 861563..861720,861766..861791)) /gene="CBG06256" /locus_tag="CBG_06256" /standard_name="CBG06256" /product="Protein CBG06256" /note="contains similarity to Pfam domains PF10292 (Serpentine type 7TM GPCR receptor class ab chemoreceptor) , PF03125 (C. elegans Sre G protein-coupled chemoreceptor) contains similarity to Interpro domains IPR019408 (7TM GPCR, serpentine receptor class ab (Srab)), IPR004151 (7TM GPCR, serpentine receptor class e (Sre))" /note="Predicted" /db_xref="GOA:A8X0I8" /db_xref="InterPro:IPR004151" /db_xref="UniProtKB/TrEMBL:A8X0I8" /protein_id="CAP26148.2" /translation="MLLHDCIFSILYYIFNTVLCLKAGDFKRNIHRINQAVYITCPIS SLFVIIEKILDVIELKQAFFSLIATMLERLCATYYIQDYEKKQRPWIGYILIAFLYSS ALFTEYIVDFKSEYFVTFSTVHLIINGISYGILLWTYRLNRSYYFENRVVKHTYSLGE RYQISENIRIHKYFTRYLFVIAFFTSACGVIMIAALLSARPFHRMLIAMFDLSYILLT IFAPYFSLQMSESFQNKYDLILLKMGIRRQTKVLDIFSEKARKLKNTFGEQMNFESSR HSDVYFEQFRKAWSREVKTPQK" CDS complement(join(862518..862572,862624..862969, 863166..863323,863371..863465)) /gene="CBG26294" /locus_tag="CBG_26294" /standard_name="CBG26294" /product="Protein CBG26294" /note="contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (7TM GPCR, serpentine receptor class e (Sre))" /note="Predicted" /db_xref="GOA:B6IG67" /db_xref="InterPro:IPR004151" /db_xref="UniProtKB/TrEMBL:B6IG67" /protein_id="CAR98897.1" /translation="MLSISQRSFYKEEYQFWFLLLFGLIICLNILSILYYFFNLIITI RVKHYKTNLAKIHQEIYVSCPISSTIVIVEKVLDIMGKRRANYIQVFVAFHMFLSTIC YFISFQSYLINRSYYYKNRVTKAVYPLAERYQIAENIRMYQFFDHFLIVLAVFVVFYF FFACILITFFCIACILITHYDSVPIHREILCVVFDLSFTLLCIIAPYLILKKRIMAK" CDS 864024..864239 /gene="CBG06257" /locus_tag="CBG_06257" /standard_name="CBG06257" /product="Protein CBG06257" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0I7" /protein_id="CAP26147.1" /translation="MHQGSAPRHAKLPTGVCLTSAHSLAHQEVRSTETALQNLRQGGT PTANQEQTHSLNSLCSLPSLSLRLSHS" CDS complement(join(865242..865533,865579..865712, 865759..865934,865980..866132,866190..866255, 866300..866457,866503..866606)) /gene="Cbr-sre-19" /locus_tag="CBG_06258" /standard_name="CBG06258" /product="Protein CBR-SRE-19" /note="C. briggsae CBR-SRE-19 protein ;" /note="Predicted" /db_xref="GOA:A8X0I6" /db_xref="InterPro:IPR004151" /db_xref="UniProtKB/TrEMBL:A8X0I6" /protein_id="CAP26146.2" /translation="MLSIEQFNERAFKQDGFYIWFLALFLLIVILNVFSMVYYMFNLI ITVRVKYYRTNLQILHQVIYATCPFSSIILIIEKSFDILGKNQVFLSDSSIFVYKPYF RTAIMCPPLFALTAIMLERVFATWFIKDYEQKQRHSVAYGIIFFMFLVSILTAYIFNS TNLILIYVAVHLFLNVICYIVSIITYKINQKYYYDNRVNKQDYSLVTRFQIAENIKVY KFFSHYLFVLAFFPITCTACALIIHYDSSPFHREILFVIFDLSFTLLCILAPYLILKT SEQWQNDLEQILTKVKNSINEPTKDRFQIGIKKSTKVQMVHERSKTLKNTFGEQMEFE TSQHSDMYFDHLRTSWNRKLTKVVRV" CDS complement(join(867917..868081,868127..868339, 868414..868530,868579..868637,868690..868842, 868886..868951,869433..869590,869788..869891)) /gene="Cbr-sre-15" /locus_tag="CBG_06259" /standard_name="CBG06259" /product="Protein CBR-SRE-15" /note="C. briggsae CBR-SRE-15 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (7TM GPCR, serpentine receptor class e (Sre))" /note="Predicted" /db_xref="GOA:A8X0I5" /db_xref="InterPro:IPR004151" /db_xref="UniProtKB/TrEMBL:A8X0I5" /protein_id="CAP26145.1" /translation="MLDLLRFNRQSAVEDGSMELYSLIFKIGITVNFIGVLYYLMNVS IDYRTRGSMNNIRRIHQFVYFTCPFHHIAFIVEKIMIIWDFEGGYDAHTTTFQTIQFI RLVTTFAGFLCLPAYAIERSFATYFHQDYEKVSRSYIGYTMSFLIYLISVISVLVCVQ FNAKFYPFLVLLVSNIVSYIVNIINYKLNRYYYNCSLRKFYTYSLTERYQISENIQFA KFFHIFALTVALFATFCSFLLLLASLPFASTEKNIFIVSFDTIYTVFILYCPYVHYKY NSTWQHEFKRWMNMHTSEVKCSSVTVGKPSLQLKSTFGERMNVNKSSQMDFYFTQLTH SWNNTRPNEQ" CDS complement(join(871138..871311,871358..871436, 871484..871617,871664..871783,871833..871891, 871937..872089,872142..872365,872809..872906)) /gene="Cbr-sre-14" /locus_tag="CBG_06260" /standard_name="CBG06260" /product="Protein CBR-SRE-14" /note="C. briggsae CBR-SRE-14 protein; contains similarity to Pfam domains PF10292 (Serpentine type 7TM GPCR receptor class ab chemoreceptor) , PF03125 (C. elegans Sre G protein-coupled chemoreceptor) contains similarity to Interpro domains IPR019408 (7TM GPCR, serpentine receptor class ab (Srab)), IPR004151 (7TM GPCR, serpentine receptor class e (Sre))" /note="Predicted" /db_xref="GOA:A8X0I4" /db_xref="InterPro:IPR004151" /db_xref="UniProtKB/TrEMBL:A8X0I4" /protein_id="CAP26144.2" /translation="MILSFNYTAAKQDNSLEQFCLGFVIVIVVNIISIFYYILNVWID IRIGKFDTNVLKIHQFIYITCPIGSVVLIAQKLMILFEMPEGYDYENQTFQFLHHLRT STVFPGLICLTAFVIERFCATYLAKDYEQKNRWWIGILIGIGLYTVGGLLAYSLALFA TSLYHTIFLLVLSLTSCMGNVLNYKINSKYLNLCQRNASGKYSLTERYQISDNIHFTF FFTRFASSIFFFTILCPLLMLAASLDISWFYRNLCITLFELSYSVYTIFTPYIIYKFN IRWQQEFRRLVSRFMSRFRSKRIDVTAEPCADGSNVNLRNTFGIEMNIDIKRQSDTYF EQLKMSWNVPDI" assembly_gap 874421..874545 /estimated_length=125 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(878961..879047,879290..879752, 879798..879999,880055..880226,880273..880491, 880618..880787,880833..881027,881042..881183)) /gene="CBG06262" /locus_tag="CBG_06262" /standard_name="CBG06262" /product="Protein CBG06262" /note="contains similarity to Pfam domain PF00481 Protein phosphatase 2C contains similarity to Interpro domains IPR001932 (Protein phosphatase 2C-like), IPR000222 (Protein phosphatase 2C, manganese/magnesium aspartate binding site), IPR015655 (Protein phosphatase 2C)" /note="Predicted" /db_xref="GOA:A8X0I3" /db_xref="InterPro:IPR000222" /db_xref="InterPro:IPR001932" /db_xref="InterPro:IPR015655" /db_xref="InterPro:IPR036457" /db_xref="UniProtKB/TrEMBL:A8X0I3" /protein_id="CAP26143.2" /translation="MDIAARVMSVVRRTSTSEPSTSSDSNPQKVGKVMDVSDGAFIGG FIPYHSFVKNKVAAIVEKQRYPYTRPEFLYFSEEEITLSSDHTIRPVLCPRLPHRMPL YAGYAEVINAGKTIQNEDQASAKMLVLTQHQGAEMNGFSEEKKIESRSSNSAEIDDDP MLTPGGDESEKSTIFSLRADAALFSLFDGHAGSAVAVVASKCLHEHVKSRLCEVLDTL LHLDRQENLNFGKHRSESSYSMSKMNEEDEARIRSEHLVKGALETAFLDMDEQISQDK QVWRLPGGCAVISILVFLGKLYVANAGDCRAVMVTSDGTKALSKDLTPASERKRLQEL AYRNPELIGNSFSRLEYSKKLTKKDLKSRVLYRDWFMDGWAVKTVKECDLRPPLISES SRKRRLLNTIGVSRGFGDHHLLTVDERLSIKPFLSAVPDITVTHLRDMNVLTDKDVVI VASDGLWDVLSNEDAGLIVRSTLGSTDSADSSRYTQAAQDLVAAARGQQASPNLKRWV LNSGGHASYDDITVFVIPLKYCAAPPADLEEEEDDEMLDLE" CDS join(881895..882053,882099..882272) /gene="Cbr-rpl-34" /locus_tag="CBG_06263" /standard_name="CBG06263" /product="Protein CBR-RPL-34" /note="C. briggsae CBR-RPL-34 protein; contains similarity to Interpro domains IPR018065 (Ribosomal protein L34e, conserved site), IPR008195 (Ribosomal protein L34Ae)" /note="Predicted" /db_xref="GOA:A8X0I2" /db_xref="InterPro:IPR008195" /db_xref="InterPro:IPR018065" /db_xref="InterPro:IPR038562" /db_xref="UniProtKB/TrEMBL:A8X0I2" /protein_id="CAP26142.1" /translation="MSLRVTYRRRLSYNTTSNKKRLVKTPGGRLVVQYIKKRGQIPKC RDTGVKLHGITPARPIALRLLKRNERTVTRAYGGCLSPNAVKERITRAFLVEEQKIVN KVIKHQKD" CDS complement(join(882376..882462,882504..882668, 882719..882848,882897..883058,883114..883166)) /gene="CBG06264" /locus_tag="CBG_06264" /standard_name="CBG06264" /product="Protein CBG06264" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0I1" /protein_id="CAP26141.1" /translation="MQRIFFDSHNKMSRDHIINEDYPNVAPFLAVENFVSFPVYSPTF CFSTSAISNILFMQEIKIIISRLDDLISRNKLNQHPCLISQAGAQATMRLASKSKLRS DWGTTVEMPFCLHNGSCPRVFDDDDLHEQAKWLKILEEVILPLDKMKESELATIAPHQ HSAIVKHAMTKLKKEQKPKSYSKSISETDSSSSHEGSL" CDS complement(join(883491..883665,883712..883836, 883884..883965,884008..884263,884311..884779, 884827..885252,885323..885664,885712..887175, 887221..887459,887509..887662,887707..887802)) /gene="CBG06265" /locus_tag="CBG_06265" /standard_name="CBG06265" /product="Protein CBG06265" /note="contains similarity to Pfam domain PF12816 Golgi CORVET complex core vacuolar protein 8" /note="Predicted" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR024977" /db_xref="InterPro:IPR025941" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:A8X0I0" /protein_id="CAP26140.2" /translation="MSTFGSLEKEDWLDLGDINNAPTFSLDDALNDTENLSDPFLDEP FALDGEFGSSSNLAESSTSLADIQPLSYKLDAAFVIQPHQLISHQILSNEKKTGRVIA VAERNGWIAVVTSKGQLLLFDLNGNLNQFHRGDESMGGASCVTFSLDGKFLAVGLQRG AIKIMTIDNKLYHMINEGGQPGQGIVQVIYTKDNHTVLTLDNGGSFYECTISKPWLQK KKDKLRCHVSGCNGEIIAMKMMPADVIALLSVHRLIFYILKPRGQILGIFPTKFEFRY PPSCSYWLGSPKSEHEVNSPLDSLYSTTLKDFKVGISRGHKLAILRIHTNNFFTKNVR FDSIRKKKSLFNFQRRATVLRQFELPAPIVNLHWMSTHVIVGIDAKGAVWQIDPEKGT SRKQDLDDLELVFSTPILKGSATGGKVSEAVKAVAEYACYQSVTSATSTSERLIVLAH DGLKYLEKVHEWEQLERYNERGDDISAALYLLDVCRDKVRASEEFRRESHNLLAEKAS RLLTSAVGDVAGGSISDLVSHYRKYIRVILKVCVTGNLLDFLYTTCWDRLCMDSISKT VFLDHLDEYVLDGALVGPPAPLVNEYLQHLAAEGHFSQFQSAVVRFPIHTLDLHTVMS ICQQNSIYDGIIYVNNKALNDYITPLESMLAEMNLFAHREMFSDSEQILGSKVLVYLN CCLSGMAYPFGQLDEENRKRVPLETFRCISSLKESNGGETNEQYPYLRLLLHYDPQQF LNVVSTCADAELFQLDNRLQRFVDTIGQICVNMKCELSLIHFLALVVQLSERALIAPP VEYIQDSIITLLKISPWQQPGTESAILTGLFHATPEDKKRIIRAAQNPMRPSILSFLY LSDRKFEELIKCYLDSENKEVYAAIGGILKEGELTTDESEEFRRYVISIMEILYRIDG WLSANLVNEHFRETVPSMARTVEEEKQLVFPVLAGIAQLRKQANYASFCDDSELDEQL FGIVFEGICKEWPSWIPSSEDPENIDRQLMSLFPFWLPLASSTHLCLNIAVENGKCVR TVIRLFEARNHLEQSFNLLFEKLEKNKQNEEKMTEWLDETIKFCSRHSSKNETSDRMM RVFQFIVERATEVGENPEKQAKIDESLRTMCKQIVSTGAKYAVQLLDKLLDSPSFANS NFIDSSDLIIDVLSSCEYDADLLEEMIYIIREENLVLAQKLRLEVSSRAPLMHNPTCI TCNQPINKSVYVFRCGHFQHIECSTNIEKVCTCNGFSNPLVVPREKPDKPRKRDIFKN WETKLNCRVFPKE" CDS complement(join(888213..888305,888354..888458, 888506..888624,888672..889449)) /gene="Cbr-tag-335" /locus_tag="CBG_06266" /standard_name="CBG06266" /product="Protein CBR-TAG-335" /note="C. briggsae CBR-TAG-335 protein; contains similarity to Pfam domains PF00132 (Bacterial transferase hexapeptide (six repeats)) (2), PF00483 (Nucleotidyl transferase) , PF12804 (MobA-like NTP transferase domain) contains similarity to Interpro domains IPR001451 (Bacterial transferase hexapeptide repeat), IPR005835 (Nucleotidyl transferase), IPR018357 (Hexapeptide transferase, conserved site)" /note="Predicted" /db_xref="GOA:Q61S97" /db_xref="InterPro:IPR001451" /db_xref="InterPro:IPR005835" /db_xref="InterPro:IPR018357" /db_xref="InterPro:IPR029044" /db_xref="UniProtKB/Swiss-Prot:Q61S97" /protein_id="CAP26139.2" /translation="MKALILVGGYGTRLRPLTLTQPKPLVEFANKPMMLHQMEALAAV GVDTVVLAVSYRAEQLEAEMTVHADRLGVKLIFSLEEEPLGTAGPLALARKHLEDDDP FFVLNSDVICDFPFKQMVEFHKQHGKEGTIAVTKVEEPSKYGVVVFKEDGKIDDFVEK PQEYVGNKINAGLYIFNSAILDRIPLKPTSIEKEIFPQMATSGNLYAYVLPGFWMDVG QPKDFLKGMSLFLNHVQTTRTGALATGSNIHGTATIRGSVLVDPSATVGENCVIGPDV VIGPRVQIEGGVRIQHSTILSDSTVGNYSWVSGSIIGRECHIGSWVRMENVCVLGDDV VVKDEVYLNEASVLPHKVIAVNVPSKDIIM" CDS join(890190..890261,890314..890409,890455..890907) /gene="CBG06267" /locus_tag="CBG_06267" /standard_name="CBG06267" /product="Protein CBG06267" /note="contains similarity to Pfam domains PF12847 (Methyltransferase domain) , PF10294 (Putative methyltransferase) contains similarity to Interpro domain IPR019410 (Nicotinamide N-methyltransferase, putative)" /note="Predicted" /db_xref="InterPro:IPR019410" /db_xref="InterPro:IPR029063" /db_xref="UniProtKB/TrEMBL:A8X0H8" /protein_id="CAP26138.1" /translation="MPENEEYARIIPFNNDESELTIFQETVTDVGGVIWDSALMTIHY FFKHPAKFEGKKVLELGSGTGVCGIALAALGADVIITDLPERIPLLEKNLAANKHLTG NRIKVEVLDWMTDKTPDGLDLVLAVDCVYYNSTITPLIDLLKNCDAKEIIVVSEERDI GEASVAQKTFFKNITEFFQLVPISQKELDPDYCANDIIIRKLIRNI" CDS join(891107..891541,891595..892922,892966..893077) /gene="CBG06268" /locus_tag="CBG_06268" /standard_name="CBG06268" /product="Protein CBG06268" /note="contains similarity to Pfam domains PF09127 (Leukotriene A4 hydrolase, C-terminal) , PF01433 (Peptidase family M1) contains similarity to Interpro domains IPR014782 (Peptidase M1, membrane alanine aminopeptidase, N-terminal), IPR001930 (Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase), IPR015211 (Peptidase M1, leukotriene A4 hydrolase, aminopeptidase C-terminal)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8X0H7" /db_xref="InterPro:IPR001930" /db_xref="InterPro:IPR014782" /db_xref="InterPro:IPR015211" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR027268" /db_xref="InterPro:IPR034015" /db_xref="InterPro:IPR038502" /db_xref="InterPro:IPR042097" /db_xref="UniProtKB/TrEMBL:A8X0H7" /protein_id="CAP26137.2" /translation="MAPPHPRDPSTASNYEQVSASYKKNGTQEKLQVVVSHYSLKWKV DFEKKHISGDVQMNLKVNQNSSEIVLDTRELVVQSVSLKLNGEKVQAEYALKDNGALG QKLVVSNVSLKTGDTPVLEIKYETSNNAAALQFLTSDQTTDKVAPYLFSQCQAINARS IVPCMDTPSVKSTYDAEVCVPLGLTCLMSAIGQGSKQSECGKRTMFSFKQPVAIPSYL LAIVVGHLEQKVISERCAVWAEPSQAEASYYEFAETEKILKVAEEVAGPYVWGRYDLV VLPATFPFGGMENPCLTFITPTLLAGDRSLVNVIAHEISHSWTGNLVTNFSWEHFWLN EGFTVFLERKIHGKMYGELERQFESESGFEEALVRTVNDVFGPDHEYTKLVQNLGDAD PDDAFSSVPYEKGSAFLFTIEQALGDNARFEEFLRNYIQKYVYKTVSTDEWKEYLYES FSDKKVILDNIDWNLWLHKAGLPPKPKYDSTLMKACKELAAKWTTEGSEAPTDGESFV KMSNSQKLAVIDAIRVNKNSFGDRMPALTATYKLDQAKNAELKFSWLMLGLETKWTPI IDASLAFALAVGRMKYCKPIYRSLFGWSATRDRAISQFKSNIPNMHPITVKAIQSLLK " CDS complement(join(893207..893345,893391..893542, 893584..893649)) /gene="CBG06269" /locus_tag="CBG_06269" /standard_name="CBG06269" /product="Protein CBG06269" /note="Predicted" /db_xref="GOA:A8X0H6" /db_xref="UniProtKB/TrEMBL:A8X0H6" /protein_id="CAP26136.1" /translation="MSTTTDEENPPLQNSKMFGLFKNPDPGFTQTGISMFATFVLTNM FVYGISGRAKLAYALSMASIPCAVVLSVRDSQKDYEKWKEMRLLRLKGVPERFMPYKC KYDWSEYDLRKIREEK" CDS join(894434..894610,894655..894885,894932..895207, 895257..895449,895812..895946,895989..896086, 896134..896809,896860..897020) /gene="Cbr-hpo-12" /locus_tag="CBG_06270" /standard_name="CBG06270" /product="Protein CBR-HPO-12" /note="C. briggsae CBR-HPO-12 protein; contains similarity to Pfam domains PF00153 (Mitochondrial carrier protein) (3), PF07690 (Major Facilitator Superfamily) contains similarity to Interpro domains IPR002067 (Mitochondrial carrier protein), IPR011701 (Major facilitator superfamily), IPR018108 (Mitochondrial substrate/solute carrier)" /note="Predicted" /db_xref="GOA:A8X0H5" /db_xref="InterPro:IPR002067" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR018108" /db_xref="InterPro:IPR020846" /db_xref="InterPro:IPR023395" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8X0H5" /protein_id="CAP26135.1" /translation="MVGYHPEAINEPLTSAEYSEAGLASGIVTRMIIQPLDVLKIRFQ LQEEPIRGRKSGKYKGVMQSVFLITREEGAKAFWKGHIPAQGLSATYGLVQFSSFEWL SRQAAKIVPSDDQSIRSTSDFMCGALSGCLAMTAAMPLDVIRTRLVAQKSGHAVYTGT MHAVKHIWEKEGIPGYFRGWIPSVVQIAPFTGMQFALYNCFMDLWPFTGYESTGALLS GAMAGTVAKTVLYPLDMVRHRLQMNGFERAGFGKTSNYSQGLFKTIVMVVKHESWYGL FKGLWPSQIKAAANSGCRIVSIHAASCTVSKLVFGTAADRTSSSRLFIGGVLLCCTSS ICLAFASAVWQIELVMAMIGGVQGAGWVPATKLIASWFDDSSYATMFSLLGCGSTFAG MILPLSKSFYWRTLEFNTGFLVLVSALTCKKWIITEDAIRKEVKPIKKSELEEGDATK LTSIVKSPVIWHIAIVYFFSMELRTICETWAPLYLTEKNISPTTFQFLYELGGLIGIV TSGVMLDKLGEKFGVDPSRRILGVIYTTLMLLVAIGVFEFEKSSTIISFFTGFFVNGS FNIWCLIGSQAGTRTVAGTCSAFISFIASVGAIFAGSPLAYLIDIFSYQVFTVIFVTQ AILILSISTLRIPLRMTTEKRKSD" CDS join(897420..897521,897602..897791,897867..897992, 898038..898351,898422..898504,898547..898658) /gene="Cbr-erl-1" /locus_tag="CBG_06271" /standard_name="CBG06271" /product="Protein CBR-ERL-1" /note="C. briggsae CBR-ERL-1 protein; contains similarity to Pfam domain PF01145 SPFH domain / Band 7 family contains similarity to Interpro domain IPR001107 (Band 7 protein)" /note="Predicted" /db_xref="GOA:A8X0H4" /db_xref="InterPro:IPR001107" /db_xref="InterPro:IPR033294" /db_xref="InterPro:IPR036013" /db_xref="UniProtKB/TrEMBL:A8X0H4" /protein_id="CAP26134.2" /translation="MLTELAFGLLAAWIIIFSQALHKIDEGHVGVYYRGGALLKSVSG PGYHLHVPLLTTVKSVQVTLQTDEATNVPCGTSGGVMIYFDRIEVVNILSQDSVYAIV KNYTVEYDRPLIFNKVHHEVNQFCSSHTLQEVYIDLFDKIDEEIKNALQIDLLKMAPG LFVQAVRVTKPKIPEAIRLNYEMMEAEKTKLLVAHQTQKVVEKLAETERKKAVIEAEK IAQVALIHQKQMITEKETQKLLNQLEPPKNPKPMRSSTKPKSKLLQTKSFSQSIEYLE LQKIQAIAANNKIFYGDSIPQAFVLGNTPAND" CDS join(899029..899075,899119..899194,899240..899354, 899401..899548,899655..899712) /gene="CBG06272" /locus_tag="CBG_06272" /standard_name="CBG06272" /product="Protein CBG06272" /note="Predicted" /db_xref="InterPro:IPR011009" /db_xref="UniProtKB/TrEMBL:A8X0H3" /protein_id="CAP26133.2" /translation="MSNRESLDESLIMDYDQVSENYNFVTKALSRLKRSSKNENMKTS YVITSTMNAEKSLAGIFEEYGNFPLPDWMTAAIIRDVSNALIQLHSNQIVHGAVTIDK VFKMKDDFSFCILTSRSHARKMDAHKFETVRFLKARHRNASSLHD" CDS join(900321..900655,900701..901125,901176..901846, 901894..902199) /gene="CBG06273" /locus_tag="CBG_06273" /standard_name="CBG06273" /product="Protein CBG06273" /note="Predicted" /db_xref="GOA:A8X0H2" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8X0H2" /protein_id="CAP26132.2" /translation="MSSEQHEMADFRRVGSLEQEVHETPPLNDAMLNSAQDIDVLDRP PTPQRTPRSSNAGIKSNYDYDDQKWDRWFVLIMFAILNFSNIASWHCIRVRWKLCQCL FSRKHFNLVKLSAVYMLISIPIGFWGMWLGGIAGVRGSLLIAAFANVRGALIRTSSGW SFNGNDRGSFVLIGQGFAAVSYPFLMYLPSTISNTYFPRDQRTIATTIGFSVESTWNL DGQSHLASDSSIISRCCYAKPSIARYLRDRKWRSYFRSRSKEVDGNDHMGSKVTYHES IKACFKNPTYVILFFSLGGGIGMFNSLYAKMFDMLCPVGRGNLMAGLCVVVMITSGVI GSVAVGFVIDRKKCYREAVMALMCGAVISGIAFIWLTNLEGKIVGFLLIVFACTLGAC GLAAYPVGLELALEATYPVASEVASGLIVIFGQLFGLFFILILQNFSKIIGEDDTHIS SIQVCGTSATEPHSPTNSPKKYTAAFVIIIGIAMMFATLTVFIQPEYKRSAVEGVYRK QGKQVHYGPDESNPRVDVNSVHKITPEAEERQRINAAAKIRQELYAAKIREENVECVT PKSHSEASTPAN" CDS complement(join(<902407..902646,903306..903519, 903564..903675,903722..903842,903891..903997, 904041..904201,904249..904312,904415..904442, 904445..904616,905415..905784,905830..906233, 917932..>918050)) /codon_start=1 /gene="CBG06274" /locus_tag="CBG_06274" /standard_name="CBG06274" /product="Protein CBG06274" /note="contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domain IPR002656 (Acyltransferase 3)" /note="Predicted" /db_xref="GOA:A8X0H0" /db_xref="InterPro:IPR002656" /db_xref="UniProtKB/TrEMBL:A8X0H0" /protein_id="CAP26130.1" /translation="QPTKSKRLDLQGIRGLAILSVLGFHFYPSYFPNGYLGVDQFFVL SGFLMCMLLTKTANSPVSSVFLNFYSRRFKRILPLYLLIILMSLIALYTVFIETAILQ NQSSAFRALFFVSNRPKTGEEDYFEKLNLAMDIFTHTWSLSVEIQFYFVVPIIFLVGN LFPEIFKLGYYFILGITSLSYYVTSSQTVAFNSMFARIWQFLIGMVVYLIYFKKISNT TSLPFEMSKTTENLDDGKQKLLEEDGFDEESENEEEEQEKEVMAPPKVTTYLGPFSKY FFLFPMAYIVTYPIAFYPFLLRPIFTVFTGALMLISVDDIYLSNKMLTYIGDISYSLY LIHWPIYSYCKLMHPGNIYGRLKILSKMNIILTAGLIVSILLAVVVFETFEKWYLKLS NISITILVLTLLSINLILIHKDVINGQMNPSSSNFTRLDGVLPNMTYDDADRLNAHWQ RTDLGGLNEPGCIKRTPGKVWCDYEEKGKDFKIAIFGNSLTLNHHKMFLQECRHRAYN VTMYSEYGCEPLAALSNEAHCKRHLIDFVDFLKSAKPDYAFLFTRFFATGVPFADANN TNLETDSTYKEMRHQMERFIPNIKKKLYVLDAFPRTNNQYTLKVAKDLKSGRKLEEIH KEIVQLDTYKLARYRTESIVKECGSKCEMIDYEPLLFNKTTNRFEFFDSTGFLYFTGI NHLSAHGMELVRPLYTEICRKL" assembly_gap 902806..902898 /estimated_length=93 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 911673..912245 /estimated_length=573 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(915041..915286,915339..915552, 915599..915710,916009..916129,916181..916267)) /gene="CBG06276" /locus_tag="CBG_06276" /standard_name="CBG06276" /product="Protein CBG06276" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8X0H1" /protein_id="CAP26131.1" /translation="MWNKFDIETMIEPGCVKRTPKHSRWCDYETKGDEYKLAIFGNSY TKNHHKMFVQECKNRAYNITMDSERGCEPLAATPSDHPCVKKLSEFVEFIESAKPDYA FIFTRFFAVADPFKDKDNQDMEHDRTYIEMKSQLNKFLPNIKKKLYILDSFPRANAGY ISHVASDLKNEKSIEEISKSLLRPDGYERGRLRHAALVKECGEKCELIDYLPLLWNNA TSTYQYFDKRGFSYFTSPNHLSAHGIELVRPIYTKICASLK" CONTIG join(complement(CAAC03004889.1:1..9252),gap(1000),complement (CAAC03000773.1:1..10590),gap(268),complement (CAAC03000772.1:1..55463),gap(236),complement (CAAC03000771.1:1..959),gap(6223),complement (CAAC03000770.1:132..5133),AC084589.1:5480..6505,complement (CAAC03000769.1:110..4575),AC084589.1:10975..11505,complement (CAAC03000768.1:213..5681),AC084589.1:16960..18505,complement (CAAC03000767.1:2682..8878),gap(10),complement (CAAC03000766.1:1..16744),gap(489),complement (CAAC03000765.1:1..14350),gap(934),complement (CAAC03000764.1:1..42282),gap(170),complement (CAAC03000763.1:1..11098),gap(249),complement (CAAC03000762.1:1..2534),gap(141),complement (CAAC03000761.1:1..23368),gap(98),complement (CAAC03000760.1:1..3090),gap(670),complement (CAAC03000759.1:1..29224),gap(10),complement (CAAC03000758.1:1..8614),gap(308),complement (CAAC03000757.1:1..25981),gap(582),complement (CAAC03000756.1:1..33676),gap(95),complement (CAAC03000755.1:1..43905),gap(10),complement (CAAC03000754.1:1..70828),gap(722),complement (CAAC03000753.1:1..27141),gap(10),complement (CAAC03000752.1:1..116658),gap(655),complement (CAAC03000751.1:813..80682),complement(AC084669.1:40468..42005), complement(CAAC03000750.1:1..54297),gap(155),complement (CAAC03000749.1:1..41597),gap(735),complement (CAAC03000748.1:1..27313),gap(10),complement (CAAC03000747.1:1..20487),gap(50),complement (CAAC03000746.1:1..35567),gap(739),complement (CAAC03000745.1:1..29188),gap(125),complement (CAAC03000744.1:1..28260),gap(93),complement (CAAC03000743.1:1..8774),gap(573),complement (CAAC03000742.1:1..10646)) //