LOCUS HE600976 530435 bp DNA linear CON 17-SEP-2015 DEFINITION Caenorhabditis briggsae AF16 supercontig from assembly CB4, cb25.fpc4069d. ACCESSION HE600976 CAAC03000000 CAAC02000544 VERSION HE600976.1 DBLINK BioProject:PRJNA10731 BioSample:SAMEA3138181 KEYWORDS . SOURCE Caenorhabditis briggsae ORGANISM Caenorhabditis briggsae Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 530435) AUTHORS Howe K.L. CONSRTM WormBase Consortium JOURNAL Submitted (03-OCT-2011) to the INSDC. WormBase group, European Bioinformatics Institute, Cambridge, CB10 1SA, UNITED KINGDOM. REFERENCE 2 (bases 1 to 530435) AUTHORS Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R., Waterston R.H. TITLE The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics JOURNAL PLoS Biol. 1(2), E45-E45(2003). PUBMED 14624247 REFERENCE 3 (bases 1 to 530435) AUTHORS Ross J.A., Koboldt D.C., Staisch J.E., Chamberlin H.M., Gupta B.P., Miller R.D., Baird S.E., Haag E.S. TITLE Caenorhabditis briggsae recombinant inbred line genotypes reveal inter-strain incompatibility and the evolution of recombination JOURNAL PloS Genet. 7(7), E1002174-E1002174(2011). COMMENT Details of C.briggsae assembly version CB4: To improve upon the C. briggsae nuclear genome assembly CB3, 167 AF16/HK104 advanced-intercross recombinant inbred lines were successfully genotyped at 1,032 single nucleotide polymorphism (SNP) markers. The resulting data were used to estimate high-density genetic maps. Sequences were assembled by combining the physical and genetic positions of the SNPs to inform the process of ordering and orienting the cb25 supercontigs into chromosome assemblies. 37 of the cb25 fingerprint contigs were split into 100 supercontigs to resolve discrepancies between the physical and genetic orders of SNPs. 638 sequence supercontigs comprise the CB4 assembly. The total nuclear genome content decreased from cb25 to cb4 because of the removal of three supercontigs containing mitochondrial genome sequence (totaling 20.1 kbp). Assembly_name: CB4 Assembly_program: Phusion Seq_technoloy: capillary (whole-genome-shotgun) Seq_coverage: 10x Annotation details: Coding seqences below are the result of integration and manual review of the following data : computer analysis using the programs Genefinder (version 980506; P. Green, unpublished data), FGENESH (Salamov and Solovyev 2000), TWINSCAN (Korf et al. 2001), and the Ensembl annotation pipeline (Clamp et al. 2003); similarity to other proteins from BlastX analyses (http://blast.wustl.edu); sequence conservation with C. elegans using Jim Kent's WABA alignment program (Genome Research 10:1115-1125, 2000); individual C. briggsae GenBank submissions; and personal communications with C. briggsae researchers. tRNAs are predicted using the program tRNAscan-SE (Lowe, T.M. and Eddy, S.R., 1997, Nucl. Acids. Res., 25, 955-964). FEATURES Location/Qualifiers source 1..530435 /organism="Caenorhabditis briggsae" /strain="AF16" /mol_type="genomic DNA" /note="supercontig cb25.fpc4069d" /db_xref="taxon:6238" assembly_gap 4469..4576 /estimated_length=108 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(6804..6971,8188..8211,8332..8367)) /gene="CBG26450" /locus_tag="CBG_26450" /standard_name="CBG26450" /product="Protein CBG26450" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IKN7" /protein_id="CAS00467.1" /translation="MKTKRKRSEFGWLFGLKLDQLDAWDGGGVVCEKARRRRKSRIRI RRKKGRKKEEEPKRYATEIVAGGASEKRAMR" CDS complement(join(<14177..14275,15302..15367,15416..15513, 15558..15831,15880..16008,16056..16185,16237..16381, 16449..16600,17339..17424)) /gene="Cbr-nhr-258" /locus_tag="CBG_17747" /standard_name="CBG17747" /product="Protein CBR-NHR-258" /note="C. briggsae CBR-NHR-258 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR001723 (Steroid hormone receptor), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /note="Predicted" /db_xref="GOA:A8XRE0" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR001723" /db_xref="InterPro:IPR013088" /db_xref="InterPro:IPR016355" /db_xref="InterPro:IPR035500" /db_xref="UniProtKB/TrEMBL:A8XRE0" /protein_id="CAP35214.1" /translation="MSSPESHFLICRVCDDSNGQPHYGTICCPSCKGFFRRVYMSEKK FECYRGNMCVIEKGTRNICRACRYKKCLQVGMNVKDIRGKYNSTSTDYERSSSSAEST PKSSKDTELGVSEAMEMAQVYMNLEKYCENNYCESNMCRDEENLLIDRMLNSNVLELI QKTSPQCPRFKRDWKPLEILNLENFCRSWSRSIVHFLDFATRFPVFNQLSTSDKRAWF ISRLAPCSFLTMAYQTRVEMCEGLLFGCSNVYPLKSDRWTSVENEHLRGLFSSITETM FSFVIYPMMNLKITDLHYSLLKACVFFSTGIVVTSVSDKGMELMRNEYAKHKNALLKL LMNGVENFSEQTDILFQIQDVQNTLERISAHFDQEIQYFHFLGLPIVNKNLLVECHIN K" CDS join(38078..38339,38411..38565,38611..39092,39137..39410, 39466..39639,39802..39951,40604..40738) /gene="Cbr-nhr-31" /locus_tag="CBG_17744" /standard_name="CBG17744" /product="Protein CBR-NHR-31" /note="C. briggsae CBR-NHR-31 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR001723 (Steroid hormone receptor), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /note="Predicted" /db_xref="GOA:A8XRE1" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR001723" /db_xref="InterPro:IPR013088" /db_xref="InterPro:IPR035500" /db_xref="UniProtKB/TrEMBL:A8XRE1" /protein_id="CAP35215.2" /translation="MRGELKIGGATSSSGPATSYVIRGDKQPSNSGGSPTGDSICAVC GDGPAKLHYGVLACYGCKGFFRRTLTGKYRYACRFGNNCIVDKYQRNSCRFCRFERCI QAGMDPKAVRPDRDQTGKQKVPRIKKKQIDEDLLNHMMRLQGDDWSRKLPVETRILLM QLMTIEDKVVKGDNNMSAQNTAKDPKSISLREMFESKPALDGRRMEIGYEPFRMAKTE ELGVIAHRRAIAAVDWVDSLTEIADAVDTEDKVALVKSCYSPLTIFNFSARTAQNTKN PDILCLCSHSYVPRRLPPEFNETNHLSNFLIDRTLNELVAPLRKLNLKEEEIVPLKAI IILDPNAKGLSEHAKQAILELRDKVQDMLFQIVKELHPIYSASSRFGNLLLLLPTITT LSGLMSENMHFCQALGGRASGDNLLAEMFGDRVFDDQMISSSISPPLFENPAEICLES ISPPMADRRFIKKTDVATQTNEDLLSSGPYLPHSNSCTSLLNSGYSPPMLSSSPFPLL DDNDDAFQNDISLTELNGCEEFFNQLLDDQPMLDT" CDS complement(join(41385..41894,41951..42104,42158..42333, 42376..42903,42948..43118,43165..43280,43326..43344)) /gene="CBG17743" /locus_tag="CBG_17743" /standard_name="CBG17743" /product="Protein CBG17743" /note="contains similarity to Pfam domains PF00782 (Dual specificity phosphatase, catalytic domain) , PF00102 (Protein-tyrosine phosphatase) contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000340 (Dual specificity phosphatase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8XRE2" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR016130" /db_xref="InterPro:IPR029021" /db_xref="UniProtKB/TrEMBL:A8XRE2" /protein_id="CAP35216.2" /translation="MNTNKQVAKGARKSAQPSSNEHLKASSFQERSKYHQLAGSQEKL KTSGTNEKHQPKSGEKLKPQTSPDLPRKAPVKGKNGLKKRGSTEKRVKTTATKTISRE EEDDKPVGLERKRSVEQQEFMEDTAKLARKPSMNALSETKVLLGKEKDKDKKKEDEMK MKKKEEEKEKEDEFASDPREDKEQRAEMIRKWASAVMLSTPPQLHKDYKSVSNETPEA ECVNCYKYKDSNRYPNIRKMLRIFFVTINFEASENVSTFRETVGMHELDEVKVFTEAV IEVPDASGKEKYFQRSLKIVVKSTGKEFKLNHYQWPSWPDQGMPDSCDLSLRILSSVR KDRQPIIVHCSAGVGRTGTLVLIESLISSLRHSKPQNPKDAFTLLRKDRAKSVQTLSQ YVYAIRCVLEYFISKGLKKNEQEWAKFKETYAKVKAKKLKAKKDEKGKGRKNSLSQEI SEPNLAIIVDPAAPKKPALPPGPFEVQTSDRGPAPDDPSTPPPMATPSSMPSPMPSPI PSPLTPPPPPPPSNAPPMIHPVFAPPDHQAIDITLTCPPPVSKSAMNNP" CDS join(47193..47296,47339..47466,47516..47633,47682..47901, 47950..48159,48210..48451,48499..48715) /gene="CBG17741" /locus_tag="CBG_17741" /standard_name="CBG17741" /product="Protein CBG17741" /note="contains similarity to Pfam domain PF05502 Dynactin p62 family contains similarity to Interpro domain IPR008603 (Dynactin p62)" /note="Predicted" /db_xref="GOA:A8XRE3" /db_xref="InterPro:IPR008603" /db_xref="UniProtKB/TrEMBL:A8XRE3" /protein_id="CAP35217.1" /translation="MSALLQYNKIKYECSCGKWRTLPDLFFCRHCFKIKCDDCSCREI DAIFCPRCLDTSSPPEARLKKHKCTSCNDCPNCANVLSARVENEKYYLHCHHCRWSTR DAKQDDRESNKSWPTKENPVTNHLNEVTAYMKRMEVIENAPKDLKKGKGKAWSAIHLK DKFGVQQMVEKRRKAMVPEMNPLKAHDPTEAPTLEEEIENRSNVLRSLDQIIMQPLTN SNELLLPVKVPLQGRVMVRCDECERTLVKRDFGVATYKFKISSFAREFIPDIRMSRPV KELKIGETAHVFLSVTNLSSSPLELTITPQSGEGTIKCSNEPIQLNLPSSKSIDSAAG GVHAEQSDVIVFRQHNRVGLRLDVVPTESDLTSPILDLLLNYKQDGSFSILAASEKVL KPEESGVDRILPAHLRISLS" CDS complement(join(48950..49407,49456..49863,49907..50042)) /gene="Cbr-elpc-4" /locus_tag="CBG_17740" /standard_name="CBG17740" /product="Protein CBR-ELPC-4" /note="C. briggsae CBR-ELPC-4 protein ;" /note="Predicted" /db_xref="GOA:Q60ZM2" /db_xref="InterPro:IPR008728" /db_xref="UniProtKB/Swiss-Prot:Q60ZM2" /protein_id="CAP35218.1" /translation="MLNIGDSVQIPGCSTKKRLLETTSGCDSFDTLLGGALVNSSIVL IDEYRSRCYGSYLVRSFLAEGLHYGHRCFVADPSEDVSETILKVIPTRKAAEDDQKKE IPSSPGQADNDMKIAWRYGNVKQVTSEIGPSGNQYDFSKHLENSNVDVYNEEIPSFSG LYKILCEVVQKEEAHTKSTGRGGPKKNLLRVVLKNIHLNIWEDYESLGRFLCCLRSLA RSSYAVIYIVANSHRMPNDTWRQLESAADTHIQLMPFNEQEKKMFRHLGTAHGYFHLK SLPRLMSAGTHTPPILDLIFEASSKKGFQIRVMHLPPAFDEPAPGQQKATACQNIDF" CDS complement(join(50244..50447,50494..50592)) /gene="CBG17739" /locus_tag="CBG_17739" /standard_name="CBG17739" /product="Protein CBG17739" /note="Predicted" /db_xref="GOA:A8XRE5" /db_xref="UniProtKB/TrEMBL:A8XRE5" /protein_id="CAP35219.2" /translation="MDLIEEQIRQRSAVKNREVIIDGQKVKWAYRSELVGRHDLDKNH RNTWMAYLIIILIGFGAFVTVKSQVVMGRRQEMDAREALRKELQLSGDDRKKVAVV" CDS complement(join(51004..51504,51552..51613,51661..51819, 51926..52019,52068..52181)) /gene="CBG17738" /locus_tag="CBG_17738" /standard_name="CBG17738" /product="Protein CBG17738" /note="Predicted" /db_xref="InterPro:IPR028150" /db_xref="InterPro:IPR036610" /db_xref="UniProtKB/TrEMBL:A8XRE6" /protein_id="CAP35220.2" /translation="MVKGWSNSDCVRPWQQAQMSKPTLRIPSRAIECHPDDHNCPAGR NPVCQYSLRSQKYVCCEDKKDADIPTCPKYYETLLLPCGNSVDSQCPRGYRCLGSLGD DSIKLCCKPNRTLEYREPEHTFRENRIVPRLLPIAPAYELIATFSDEQISMGQLFDAS IIEKLADPPIMSAGVELQDEKLYTIILAGKPHFLTKSSFLLTDATSKAVTWLVANIAA FDGQLEIHRRTKSAVSYQPPDETDKPVGMHTMILALFEQHDTWSQKDLARIAMDDFNF GEWLEEYAHVLPGQPLAATFYGYSTKKDDRKRI" CDS join(53929..54101,54155..54522,54566..54727,54777..54937) /gene="CBG17737" /locus_tag="CBG_17737" /standard_name="CBG17737" /product="Protein CBG17737" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRE7" /protein_id="CAP35221.1" /translation="MDRTYAEIENAYSQITTLSPMTATPKKPNHQNQMRQSQSRKTRH LREEFDSRLPIEYRYPKRNSVTSSSTTRKGSLVSKSSSSGYSSSGSISSITTVVSGVK PYRPKKEEDLFEKEEKVEVIELENEQVENKEEDPVFELPKKVRACCIECREKEIREEL DLESHQYANIQSIKKPQDPYVFLMTTMLSNLQKDDGGRKMAKVQQKIEKVLRFKPREP FNVDNKLIFDRQICAFSSDVTVRLQAINDMAPEAYRDISARFCEALHHGTPNSKSLKS IVKGVKNLLNF" CDS join(56619..56767,56818..56980,57031..57570) /gene="CBG26451" /locus_tag="CBG_26451" /standard_name="CBG26451" /product="Protein CBG26451" /note="Predicted" /db_xref="GOA:B6IKN8" /db_xref="UniProtKB/TrEMBL:B6IKN8" /protein_id="CAS00468.1" /translation="MHSLTKKNNPEMPVETDEDDFVMVGKTSQKAETKGEPTSDQIEK SLKRCRERLDDMPKDLHKNALKVALFFFVFALVISLTERVTHLQIRNNSLEKEKTEGL ETISQLQDELDKMKEIENQWLIKEEMKQEASGAETDQDEDLKFYREWGESNRVLKMKL RQTYEKLMEDKFANIVMPAFLFIFAVLMGVAIRDYQIRNETEKTRKERAAVAAAIVAS AATEATKEEEGVEEEEEEEEEEEEDDNDEEEEEEGDQNEDEEEGAVNEEEDDEDEDDE DEAVDSE" CDS join(58529..58656,58702..58858,58901..59041,59084..59287) /gene="CBG26452" /locus_tag="CBG_26452" /standard_name="CBG26452" /product="Protein CBG26452" /note="Predicted" /db_xref="GOA:B6IKN9" /db_xref="UniProtKB/TrEMBL:B6IKN9" /protein_id="CAS00469.1" /translation="MSLIVQEDSDDDSFVFVDKIKKEGKKKDDYKMKPLNTLISGLRK NTNKEPDYENNARFLSFVTLVALIIAFTFKIGDLTVQYRELENVNRAAMEKISNLQKE IDKNKQLDEQWNAREEVYGEPSGGLGRSENVICTKQEQEKVMEKGNKKEATMTAEEVK LISEVLHTVAAAIYVALVFMALRHLRERRRRAAQEVTPIPGTVSCGNKK" CDS join(59859..59861,59910..59991,60169..60431,60486..60788, 61802..62266,62451..62725,63463..63658) /gene="CBG17734" /locus_tag="CBG_17734" /standard_name="CBG17734" /product="Protein CBG17734" /note="contains similarity to Pfam domain PF07738 Sad1 / UNC-like C-terminal contains similarity to Interpro domain IPR012919 (Sad1/UNC-like, C-terminal)" /note="Predicted" /db_xref="GOA:A8XRE8" /db_xref="InterPro:IPR008979" /db_xref="InterPro:IPR012919" /db_xref="UniProtKB/TrEMBL:A8XRE8" /protein_id="CAP35222.1" /translation="MGFSMQSQFGAIERKVEMLISRKSNPDKTDYQRGASVDMDHSSS SNLNPIIGYDQTNLVLLYRPQLLADKAWCSNAENPVLTINLAKYIKPISVSYEHAHWE GIVQNGAPRTYDVVASLDFYCEKWKPLVSNCEYSQYGSNEQMCNISSRIDVPLIGKVQ FRSRENYGGTKMTCVHLVRVYGETKTPAKIEEKNLRSEEIYTDLRWYYHNSYFKYIWV FKLQSQVHKLEKKSEHKNHRFENSEDIKPSISDVILGSKIQGQTKPPVPINLKDPMIS NEEFQFNAADFLNGASVDNDHSSSSNLNPIIGYDQTNLVLLDRPQPPTDKAWCSNAEN PVLTIYLAKYIKPISVSYQHSKWHGTIPNGAPKTYDVVACLDYNCEKLERLVSNCEYK SYGAGAQEQVCNINPHQNVSSIGKVQFRFRENYGNTEMTCVHLVRVYGETKTPVKSKE KNLKSEEICSNLKLFIFYNEAKDIRLKMEKEPNPQEVELSETEPLTSNAPTTSYTEVE ETEKPETTPSDKPPRRPGVW" CDS complement(join(67022..67240,67518..67835,67894..68385, 68430..68514,68779..68912)) /gene="CBG17732" /locus_tag="CBG_17732" /standard_name="CBG17732" /product="Protein CBG17732" /note="contains similarity to Pfam domain PF07738 Sad1 / UNC-like C-terminal contains similarity to Interpro domain IPR012919 (Sad1/UNC-like, C-terminal)" /note="Predicted" /db_xref="GOA:A8XRE9" /db_xref="InterPro:IPR008979" /db_xref="InterPro:IPR012919" /db_xref="UniProtKB/TrEMBL:A8XRE9" /protein_id="CAP35223.2" /translation="MKPKFGSETKPFLEDVESSKPPNPFQFKKNEYYGSQKPILKEQS FYRYIKFQVFHQPIVNAVVALFAFLVLVQIYSDRIRIFALEQRLYQVELQLNSAPRED SHKANTVIQETAKTVTPTTNIVPTVKPESSNKKSEFNAASLILGATVETELSSNPVPS GDGFLDKLMFKLGSDQSGYVLLDRDPILAGKAWCSDEKNPVLTVKLEEDIKPIAVSYQ HSKWNGTVPADAPMTYDVVACINESCNVTVALASNCNYSSSKNEKEQKCQISNTYPSV NRVQFRFNKNHGNSSKTCLYLIRVYGEAKEVVRNQKEDNVELKKSRVGLCSRLAWFHK KIPIFYNGLASKNCTTLYSNECCDECPECCSGCQINDGDFLNNFQFILIFFVLFFILF PIYIAGISACCVGLRRLFSRAFY" CDS join(70292..70545,70595..71200,71249..71408) /gene="CBG17731" /locus_tag="CBG_17731" /standard_name="CBG17731" /product="Protein CBG17731" /note="Predicted" /db_xref="InterPro:IPR036915" /db_xref="UniProtKB/TrEMBL:A8XRF0" /protein_id="CAP35224.1" /translation="MPVAWSGLPSLVQEDILKEMSAESTFFLSMASKRTVDSMSRFRN KNVSGIMMVFGKDAVGIRFETSDKNFFNCEKIAFKLDTFPRITGLYATNDNKIISEFV CESKENIVSETHNHLLDLFRKSRNLEFTVAVFDFKSYKWIPFVKRAKIMAENVGISHL EKFIDSHSDLESIHLERKFIGHISPESNLYNINHVSLNALKFPFNEFMNNFKGKSAAL QCSGHLNGHVRLFIRSWLKGGYADNVKMLHVLRTGQEIFYDEMLLESFFDEVTPFEQA GVSRELPSFKEIRKQFETLPNWFQETDRDMVIERESDKKKALVKMGANDFIFLVLDDI DMVNV" CDS complement(join(72663..73217,73277..73345)) /gene="CBG17730" /locus_tag="CBG_17730" /standard_name="CBG17730" /product="Protein CBG17730" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRF1" /protein_id="CAP35225.1" /translation="MISKVVFVALLAIATVHAKPGGRRSPPCGIPPFLDSLPEDAQEK INDIWKDYKEGDKCYEEQGLTREVIDALPKDARKNLHKRPTLPFLKGLPKETLAKFEE IFKDKSIKWSEKPEKIEALAEKELSGDNLKKFKEFKEKKEKEDKEYKEKESKLSDEAK TAHEKIEALNKQKFEILGDLSEKAKEELFDLWRSRPHFRGGRHGGKH" CDS join(74954..75040,75088..75471,75522..75683) /gene="Cbr-ora-1" /locus_tag="CBG_17729" /standard_name="CBG17729" /product="Protein CBR-ORA-1" /note="C. briggsae CBR-ORA-1 protein ;" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRF2" /protein_id="CAP35226.2" /translation="MISKFAAALLLLAITIEAKPCFGRCGFGRPPPPCGLPPFLEDLP AEAQTKITEIWKDYKEGDKCYEEQGLTREVMESLPKDVRKSIHKRPPLPFLRGLPKDI IAKFDAIFKDKSIPFAQKPEKVDALAQEVLTGDNLKKFQEFKEKREKEEQEYKEKEAK LSPAAKEANEKLEALGKQKFAILEELDEEVKDELFDLWKSRPHGPPRPRH" CDS join(76608..76843,76891..76966,77633..77728,77794..77943, 77988..78815) /gene="Cbr-unc-24" /locus_tag="CBG_17728" /standard_name="CBG17728" /product="Protein CBR-UNC-24" /note="C. briggsae CBR-UNC-24 protein; contains similarity to Pfam domains PF02036 (SCP-2 sterol transfer family) , PF01145 (SPFH domain / Band 7 family) contains similarity to Interpro domains IPR001107 (Band 7 protein), IPR001972 (Stomatin), IPR003033 (SCP2 sterol-binding domain)" /note="Predicted" /db_xref="GOA:A8XRF3" /db_xref="InterPro:IPR001107" /db_xref="InterPro:IPR001972" /db_xref="InterPro:IPR003033" /db_xref="InterPro:IPR036013" /db_xref="InterPro:IPR036527" /db_xref="UniProtKB/TrEMBL:A8XRF3" /protein_id="CAP35227.2" /translation="MTFFSSSSYKYSALSQNDPEAPEEELEMESLEGYSGVVDFGDPN QSVMEYGMPEGSFDSAFTYAPYNDLDKMGYVGPKKQGMVLGSKYGNFTYSRDYGQDME ENIKPLSAVELVIYGFSMLFVVMTMPLSLLFALKFISTSEKLVVLRLGRAQKTRGPGI ALVVPCIDTTHKVTTSITAFNVPPLQVITIDRGLVELGATVFLKIRDPIAAVCGVQDR NASVRTLANTMLYRYISKKRICDITNSQDRRIMSANFKDELGTFTCQFGVEITDVEMS DVKIVKEGENMGMAALSSVAKSDAGQQLWQVIGPAFEDFAKECAAEEKAKEAAPLVDL SDVPSTSTNIPTSSSTEPSIDIDHLITVANMAIDEHLVRLIGRVFQINCADVDPICID LKHGAGSAYKGTALNPDVVFESSFAVFGKIITKELSPVTAYMNGSLKVRGSIQEAMQL KYLVERMADWI" CDS join(79392..79442,79487..79583,79719..79843,79889..80071, 80244..80330) /gene="Cbr-arf-3" /locus_tag="CBG_17727" /standard_name="CBG17727" /product="Protein CBR-ARF-3" /note="C. briggsae CBR-ARF-3 protein; contains similarity to Pfam domains PF00071 (Ras family) , PF09439 (Signal recognition particle receptor beta subunit) , PF04670 (Gtr1/RagA G protein conserved region) , PF00025 (ADP-ribosylation factor family) , PF08477 (Miro-like protein) , PF00503 (G-protein alpha subunit) contains similarity to Interpro domains IPR006687 (Small GTPase superfamily, SAR1-type), IPR013684 (Mitochondrial Rho-like), IPR005225 (Small GTP-binding protein domain), IPR001806 (Small GTPase superfamily), IPR003579 (Small GTPase superfamily, Rab type), IPR001019 (Guanine nucleotide binding protein (G-protein), alpha subunit), IPR019009 (Signal recognition particle receptor, beta subunit), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR006762 (Gtr1/RagA G protein), IPR024156 (Small GTPase superfamily, ARF type)" /note="Predicted" /db_xref="GOA:A8XRF4" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR006689" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8XRF4" /protein_id="CAP35228.1" /translation="MGLTISSLFNRLFGKKQVRILMVGLDAAGKTTILYKLKLGEIVT TIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIEE SREELHKMLNEDELRDATLLVFANKQDLPNAMTAAELTDKLGLHNLRSRQWYIQATCA TQGHGLYEGLDWLSNQLSKT" CDS complement(join(80888..81409,81450..81543,81596..81733, 82787..82866)) /gene="Cbr-mec-17" /locus_tag="CBG_17726" /standard_name="CBG17726" /product="Protein CBR-MEC-17" /note="C. briggsae CBR-MEC-17 protein; contains similarity to Pfam domain PF05301 Touch receptor neuron protein Mec-17 contains similarity to Interpro domain IPR007965 (Touch receptor neuron protein Mec-17)" /note="Predicted" /db_xref="GOA:A8XRF5" /db_xref="InterPro:IPR007965" /db_xref="InterPro:IPR038746" /db_xref="UniProtKB/Swiss-Prot:A8XRF5" /protein_id="CAP35229.2" /translation="MQVNADLRPILGPQLVRLDPMRIKQLQDPQVYDAIDSLAKLSAH CLQLRTPLTTCEKLINSDSTLYLSWKYDEEEKVSRLLGFAKVGRKKLFLYDAQMQTYE GEVLCLLDFYVHFSTQRQGVGKQILDYMFSQEHAEPYQLALDNPSVTLLGFMSQKYGM NRPVWQNTNFVVFDELFQSLSAENGVGTVDFQSCKYRIFNSEKSPPDGWRRPMTPRRL GTGMTDTRWLQHAVSGHQSKGNAMAAPVDADMTPQGALSNRAHQAKARKAHILSSKPL W" CDS join(84460..84891,85108..85234,85279..85792,85851..86004) /gene="Cbr-col-115" /locus_tag="CBG_17725" /standard_name="CBG17725" /product="Protein CBR-COL-115" /note="C. briggsae CBR-COL-115 protein; contains similarity to Pfam domain PF01391 Collagen triple helix repeat (20 copies) contains similarity to Interpro domain IPR008160 (Collagen triple helix repeat)" /note="Predicted" /db_xref="GOA:A8XRF6" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/TrEMBL:A8XRF6" /protein_id="CAP35230.2" /translation="MKGNDQELEDLALRMRHLAVFSSSVAVFVAVLSVFALPILISST LQAVVSRISISNLLLLEKTLASVDDSLGRCTADAFKMYKAIDEIEIQLIRSFNKTSQR TKRGGGYASASSYGQYSGQYSGQQYDSVGTPTSNGQYRFFPEVLEAIRARRPTLHSLQ QDYHSGGGGGCGVSSQGYQTRPTFVGPQTGSILRDGQSGFNGGGGCVPRFGPPGPPGT PGQSGRDGSDGEAGSNGGQGRDGVADIDREPCQVCAPAPQGYPGPPGPRGRTGEQGAP GLDGNTFDGEDGVPGLPGPPGPPGPPGLPGSMGEHGQYREEEIAGPPGPPGVKGPQGG VGSRGAEGNPGPKGPPGQQGNPGAPGVGGRPGLQGRPGNPGAPGSPASCDHCAPPVLE PGYQVDVKKTLKRSSP" CDS complement(join(86536..86669,86738..87592,87637..89437, 89485..90048,90098..91788,91836..92670,93440..93881, 94193..94350,94462..94610,95945..96284)) /gene="Cbr-rig-4" /locus_tag="CBG_17724" /standard_name="CBG17724" /product="Protein CBR-RIG-4" /note="C. briggsae CBR-RIG-4 protein; contains similarity to Pfam domains PF00047 (Immunoglobulin domain) , PF07679 (Immunoglobulin I-set domain) (3), PF00041 (Fibronectin type III domain) (10)contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR003961 (Fibronectin, type III), IPR013098 (Immunoglobulin I-set), IPR003599 (Immunoglobulin subtype), IPR013151 (Immunoglobulin)" /note="Predicted" /db_xref="GOA:Q60ZN5" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR036116" /db_xref="InterPro:IPR036179" /db_xref="UniProtKB/Swiss-Prot:Q60ZN5" /protein_id="CAP35231.1" /translation="MNYRIFLLFCTTTVLWSVVSTQLVLGKPPIFQNTGPVEQKVAVE GEIVRLKCDDAELAEQYEWRVGDASGDLIAASRFAQVTVSRTNDNQKYRCVARNTVGA AISPPSVVRSKYLDDFDASDESAQYDVLAGIGRHFVLRTPRLLSSRNLDISYSWIKDD SNQVTPDATHFVTANGDLVVTSVKRDDFGTYKLMASSDDLKEIVSKEYIVKDNGMAPS LQNTLSIIYFSPERTIVESSMPHDEKFDCVTSFEAKDDVRIRWFLNGQPITGSEVGIK TTMNNRRLIISNPSGFTRGEHKLECRADAAMGRTSDQNSAYLTFISRPVLKDLPNEIH KKVGSSLTLKCGVKKKSSMDIKWYRNGLMMNTQRGKLTIDRIRQEDFGLYQCEAVNEA GADMSSVWVKEGDINNDTMVMGMSEDGRSLEEEISMETPPPRKLKFFDSSKSQEQLFP FTSDIESSQRLTKTPKDLTAASGTDKITLECAAAGSPPPHIVWFLNGNGIQTDSVKYD FSNGDLTIHDIRKSDEGEYTCEISGTDVKASANVQVNGDSLIEYGPADQKSLIGTNVE FSCEVAKEYARKATVEWYLNDALLPVNGNSGLRISRNRKGSLIIRQVGPDNTGEYRCR VTVDGREENASAMLQIIEKPAMPERVRAELHNETMPAKVRVRWNEGFDGNEPIIKHAI EIRTMGPTGLWSDWTTAIDNIPKDDGKPCCWADIEDLRPSSTAEFRVVASNKHGPGKP SLPSSSVTMPQQPPSAAPRNVAASARSPHSVMVQWQQPKEEQDSGDFLGYVVRYRLAG YSSLTWNEKNLTTKDARNTLVDELITWREYEIQVAAYNKRGLGVFSESIEVTTAEGRP TQAPKNVRVKVLNSTAVSLEFTAPEQQRIPGVNLGYKVQFWKGEPEKGELYKQVILDP DRRQLSTVVNELEKFGHYNLTVLCFTTPGDGPKSNILRVVTEEDTPEAVDELSIAEVM YNGAVLTWNPPMKENGIVTKYTIRHWASSSPDVKTKHEVDGSTTNITIDGLQPSTRYG VDVMASTKKGDGPVEETKFESGVPPELPGRPSMLSIGDISATTVQLHFTPGFDGHTAI RQWIVEGKMADSSVFAHIFNVSSPKARSIIVTGLRPFTQYQLRLIAENVKGRGAPSEP SRTFETLQTNPETPSQRLFTEPVSATSISVSWTPLLATHWNGQPKGYLIVYREVDEDN WKEVRTPALRSSEHTVTDLRPFTTYEVNVFSENVFGRSLPTDAVKARTYESVPSGSPR NIVVTAEGSKSAIVKWDPVAELSTNGDVIGYKLRVVPERESLMADETREIDVPGQSTL MTKVSNLRPFTSYYVYMSAYTIVGNGPENSTPLSFETLEDVPAPPESFQCSQISEQDV RMKWLPPGSPNGKITNYVISYWKSHEPRSMAIDAQVAGNLLMFSAMSLSPNTQYTFAI KAKNSKGESEEAVAEVMTSSVRLPVRNAPAPVRDTTSQHLATEITIRWDESLPRKLTE DAESPVRAVQVSYQKTNEDEWLTLEKKFEYSKRRAVIKHLSPNSMFRFRIRFIGDFLE SSWSPESEWMRTLPSAPFAQPISLKATPYERNSVQLEWVVPHKSTWNSDAIGYRIHYR EYPSNETWQMEEIAVHDPHEDREEKVLAKLSTFRHYIIRMRLFNSEGEGPFSAPVFVY VGYSIPKRNLTNIITEPLSSSSIRVKWDAWPKEDSETVTSFKVRYVPVASVLSSVSSE EEVMIVDTNECILSDLRKFAEYQISVSPYNRAGEGKMSQVREKTLEDKPGPVGVLRFS DVLMDSVKVSWDEPAQPNGMVIGYIVNYKGYRMQEEFKNEDQQRTSRNYFDSHGLAEG VTYFFSVWAETSAGKGELRSANVTIGPSKDGPLPPSKPQITSGQSYVTLSWNDVANSD EIVGHLLQAKRVSVAEETENGYVSQRPRRNEIRGAKSAAQTSASSNSNRPTHPIGEWI TLRPTDGKSEKEQVSYRELQPSSFYVFRVFTRNVRGIGRASPETEQLFVPESIPDDPF YTTWWFMALVAMAAFVLIVIIIAILCVTGSSAKYRREKRSRSIDSLQLADGNFASFQL KGTSAANMTRSRELPTRPGTTQSWLSDQSREPPAYGSVLGDGRNNGGVMNMYGLATDV IPPLPNSGPPHASLEAMQKLSALVGRDIRSQNTAYVVSSSARGSDNERNEYMPTRSDL YGTRSEYGRVEYRGHIPSSSGGSQPQGSPQQQQEPYDSFDEEDDVDDDTVIRGDRTMT DGADDIARHYGSTDQYRDTWRKVRDTDMVRAPILTNQQPSSAAGRSSTTDSTSEGPWA NIPATPNLTAGFSSFV" CDS join(101789..102170,102216..102535,102579..103001, 103048..103371) /gene="Cbr-sun-1" /locus_tag="CBG_17722" /standard_name="CBG17722" /product="Protein CBR-SUN-1" /note="C. briggsae CBR-SUN-1 protein; contains similarity to Pfam domain PF07738 Sad1 / UNC-like C-terminal contains similarity to Interpro domain IPR012919 (Sad1/UNC-like, C-terminal)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XRF8" /db_xref="InterPro:IPR008979" /db_xref="InterPro:IPR012919" /db_xref="UniProtKB/TrEMBL:A8XRF8" /protein_id="CAP35232.1" /translation="MALRHTISPQLSNRPSPPITRSVSRNGHRPTFETSTPVTRRSLQ PGMEIGTIERVFEQADDSTIDLNSSKFVYKEHFTVKERTSMQKEMWYDWLVYHIRMIR RHLFPNTEKIRETLLVLVLLFILHKYALDCWYDPTTKAEQPINHQSRIEFDSKWTPEI ERIIEESNKNLQMSISIIKDRENQLEDRTTHLETLSDDEKGWKESVVEEIRKIKASQT AIDQLVESLKKDLEENKLSKVIITEEDRQPTGPPEPPGSSSSILLHPMHFLHRSPIGV NVANSLIGASIDYSCSSRPVSAKDGIFYDIMSYFGSFKEGYVLLDREVLTPGEAWCTY DKRPTLTVKLARFVIPTAVSYQHVRWSGIVPNHAPKLYDLVACLDSCCTQSEPLILNC EYTASEEGPDEQEQFCSIPTINSMQPINHVQFRFRENHGNMTKTCAYLVRVYGKPVNP QPPLTEQDAAALDNGTTSHLESTLVDSVPESA" CDS complement(join(103570..103638,103681..103819, 103863..104009,104057..104320,104702..104904, 105123..105230,105397..105471,105957..105995)) /gene="Cbr-frpr-10" /locus_tag="CBG_17721" /standard_name="CBG17721" /product="Protein CBR-FRPR-10" /note="C. briggsae CBR-FRPR-10 protein; contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10324 (Serpentine type 7TM GPCR chemoreceptor Srw) , PF10320 (Serpentine type 7TM GPCR chemoreceptor Srsx) contains similarity to Interpro domains IPR019424 (7TM GPCR, serpentine receptor class sx (Srsx)), IPR019427 (7TM GPCR, serpentine receptor class w (Srw)), IPR018187 (Asp/Glu racemase, active site), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8XRF9" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="InterPro:IPR019427" /db_xref="UniProtKB/TrEMBL:A8XRF9" /protein_id="CAP35233.2" /translation="MKLHIKEIALEKLICVPGSLAAVLSAIVFAKLRHSSLEVLLCGL SLFDVVLLTSSIMIYPSMHQCSTIHEPSERHKSYVCHFFWKVTVFIFPLSLVAQAGSV WTYVAVTVDRFIAVSFPIKRRVWSTRSNSLSVLVIITVVCTLFKLPSFFEVRLDANGE VVPTELRKNEFYIEFYLFYLYVAFIQLIPWAIIIILNAFIIHKVRLAYRAHELMCHNS GKSSKREDAERKVTVMATVMTMIFIICNIPPGVNYLVDRYSKTEVYRQRIPLSNVLVC VNSASNMMIYCLFNIRFRRAAMKLLGCPGIISTRQGSVVTRLTNDGNGTLRSRVATFE NLHSRSPEGPTPC" CDS complement(join(109749..109842,109885..109973, 110018..110206,110252..110608,110656..110755, 110800..110998,111046..111367,111411..111611, 111657..111783,111830..112088,112133..112284, 112333..112544,112594..112750,112795..112951, 113954..114350)) /gene="Cbr-csr-1" /locus_tag="CBG_17720" /standard_name="CBG17720" /product="Protein CBR-CSR-1" /note="C. briggsae CBR-CSR-1 protein; contains similarity to Pfam domains PF02170 (PAZ domain) , PF02171 (Piwi domain) contains similarity to Interpro domains IPR003165 (Stem cell self-renewal protein Piwi), IPR003100 (Argonaute/Dicer protein, PAZ)" /note="Predicted" /db_xref="GOA:A8XRG0" /db_xref="InterPro:IPR003100" /db_xref="InterPro:IPR003165" /db_xref="InterPro:IPR012337" /db_xref="InterPro:IPR036085" /db_xref="InterPro:IPR036397" /db_xref="UniProtKB/TrEMBL:A8XRG0" /protein_id="CAP35234.1" /translation="MQSENRGRGGGGRGRGRGDRESGRGAGRGSYRDGGSERGPPSSS RDERESNNRGRGGYRGGSDRGTSSREGNESRGGYRGRGGPRNGQNSSYRGRGGDGHRG GRSNNDDNHARPVEAVGRCNGLLPDDKENKGNSSNMNQNNPRLAINIFGLELSDRTVF RHVVQMKLLDHKTKKDYILTTMSARGRGNRASKQKDNFILLRKLLDKWAGRKGGKKTD VLFAYDGAQSLFTLEGISELMVIKKEDALEIPEISEFLKDSIKFLNGDLEITCEPDLE KPSFNQTEVNEWSDPRFYAYLDIVTSQSAIRSGKYLSQSKGLYVNTGHMEELRVKWAV AAKGIHKGCRIVGTGHPLPILELDPQSTQYYAAIPLSQMIQYAFPRDFVPNRMINPNM RLQRAVKLLLKDLKCNPFYEDLADWATNTITVSDVDYNAPKDPEYRQKYPNLRFPNFP AAQCGNGPHRRLMPLEYLKVLPFQSVDRRVLEEFELTPRANAPNERWTTLQHHYEEFG FNDQVMQEFGVQICNDPFQNISEIDGERVLAPKITYADPVHVDDEKRDWKAQDKKFET PATIHHLVFVLVAGYSRNFDAEIKATEFVARAFMQRCNDKGMRIDNYELRSFEGERNS ENFLTSVFKNLVTHNRYRDPSFIPFVLFVSDDVPNIHECLKFEERMSDIPTQHILLKN IRKIRDNIEKKSQGGRRAYDLTLDNIVMKANVKCGGLNYTADIPRDIGSWREVSTFVM GMDVAHPDKMATREGSPSTVGLSCNSAESPYSFVGDFLYTDPRREAIQDEILRKFTDQ NVRNFAERRGFPKRIIIFRDGVSFGEETEALREVKIIEETCIAAAKSMGHRDYAPKVL AIVVKKRHHTRFYAKGGHHGNMPTNPLPDTSVGGEIAEYGKRQIFIQAFRPVQGTAKV PSFLIIRDDEEVTDDHITKMVCAVCSLHQLVNSPTSIPTPVYVAHEMAKRGTGLFKAY RFKNGELRDWATLSDQLSYSTLDRLSKVRVV" CDS join(115021..115090,117134..117237,117294..117388, 119572..119764) /gene="Cbr-ceh-19" /locus_tag="CBG_17719" /standard_name="CBG17719" /product="Protein CBR-CEH-19" /note="C. briggsae CBR-CEH-19 protein; contains similarity to Pfam domain PF00046 Homeobox domain contains similarity to Interpro domains IPR020479 (Homeobox, eukaryotic), IPR017970 (Homeobox, conserved site), IPR001356 (Homeobox)" /note="Predicted" /db_xref="GOA:A8XRG1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR017970" /db_xref="InterPro:IPR020479" /db_xref="UniProtKB/TrEMBL:A8XRG1" /protein_id="CAP35235.2" /translation="MYAIANDLRTPTLIELQMLLGVSARKHDYKRNRKSVSERKPRQA YSARQLDRLESEFQNDKYLSVNKRIQLSQTLNLTETQIKTWFQNRRTKWKKQLTSSIR QMCKEVPSTPVVPFPALLSQPNTSLATSLISSLNTSVSRQEESSSVIDNHE" CDS complement(join(120017..120199,120216..120748, 120798..121377,121429..122430,122483..122919, 122966..123083,123129..123373,123418..123757)) /gene="CBG17718" /locus_tag="CBG_17718" /standard_name="CBG17718" /product="Protein CBG17718" /note="contains similarity to Pfam domain PF03399 SAC3/GANP/Nin1/mts3/eIF-3 p25 family contains similarity to Interpro domain IPR005062 (SAC3/GANP/Nin1/mts3/eIF-3 p25)" /note="Predicted" /db_xref="GOA:A8XRG2" /db_xref="InterPro:IPR000717" /db_xref="InterPro:IPR005062" /db_xref="UniProtKB/TrEMBL:A8XRG2" /protein_id="CAP35236.2" /translation="MDPPPFNFNSAGTLGKTQPVAPPGSFSRNKKIVISVYSAPSAFG AAVPKVAFGAGSLFGKPSLHAQAAAKQDAPPEPKPSVSLASSSSLASRLTMVGKNKPP VLKAKRDSSDDKVPNLQEGAFAIPSRLKEGGKSTIGPFTFRKRGATGEAQKRLVEPKP IRPSQRVGFQFGQPNNEVKSLFGKPKPVVEEGHNETDHAVKMEGPSGLFSGSFGSTSK GFGGLSNEKTSSFKPIADRTWKPSSRLSPAPESRPQLKTGSEEAKLIQKLAGLRGQKC PEDYDKYILLDERDKILCQLREVNSPLIQRLERCEEMCTEKERYQRIVQKGVSPFECD EETGDVSHEMMVKQYARSAADQERPLPHELRSEKIMNHAMCYLLHNVLDEFPEFAEQR AAWYNFLWNRTRALRKEVTQLSLSDSLALNLVERCTRLHILFGYVLCDLETEYFDAAM NNETLGKCLQTLRHFYEDFEKRGIPCVNEAEFRSYDVMLHMNDTNILSQVLSYRSEVR QSKSVRLALQLASAFRDKNYCRFFRVLQTDASYLQCCVAHKLFNITRSNAVSIMTNSY GRNTFPLEKLQRILAFDKVEDLTSMLHTYGLRTEGTDYVMLSKDDLTLNETIPLTTYD WIDRKSTGKFSSAVYGPDLFQFIASRCDVSNSFNHHQEYTHDRVLEAVLNESDVPITI NDASSSFAVSSGSLQAQATMEQRQKAEAERLKRVRVAEREKLIEKLTSGVVDQVVYGI VDEEVRKAKIVRKQMVAMENARQRKAEAERIRLEQEEIRMNKEKEIARNLAMKVEKEV AEKQLKKIAEEELKREKHDRERRLARSITEKFWKEVLKSIDGRVKSICEDMVNEKEAI LERLGVFRDRMSKQWLLQFWNRWRDWVQIKKEAKLRKLDMIRRCVPRWESEEIAKNLN EKYGSSSQNTSPVCPMLNRSSNHIKLKIFKVKRQNRMVRDAFTKWRSSARQIKHKRMS AQEKQRREEEFYRRFEKSTKIETRYKFNAPDDWMMSERKSHESVLKDKQPSYSCVTNS SFQCPDTSLYVARRYLEDWEPSTELPEDVKDKLKRKRESFENVCEEHLSKKKRDEVYF SWSFIFLIVIFIEVKKEDLYLKKVTGEADALLDETLRYTAELDRMMADIKSRRVDEL" CDS join(124332..124625,124670..125226,125271..125813, 125865..126675,126725..126856) /gene="Cbr-czw-1" /locus_tag="CBG_17717" /standard_name="CBG17717" /product="Protein CBR-CZW-1" /note="C. briggsae CBR-CZW-1 protein ;" /note="Predicted" /db_xref="GOA:A8XRG3" /db_xref="InterPro:IPR009361" /db_xref="UniProtKB/TrEMBL:A8XRG3" /protein_id="CAP35237.1" /translation="MPSSEGSYRDLEKKLKDGLTSISADIVDKYGNLKVALNINNTAK LIFDRLENLEDTAEMSSRELSNLIEQTEKDSPEMLAEIKTQARSCENLVEFLQSMKKV EEQLIIMRSKTTNRIEWGNAILACKDYLNETNLLLEGIQCEGFDMSIPLKHFAAEYSV LSYNCRYQLSADYDRAMSVPKVSKKQGGDKSNVSVTVLNLSTPEEQKNMNETLTAMNM IGQLPERLDAWKTVILNVFCEAIVSSRDGVDVFFVDNPTPAQTRFLINQKPRGKKDKP MDVEKVLQSMDVFFSKLSDVLKSHELLDACGKSFVAMIGHAIQPQLNEMILKDVVAIA APVTETAEEDQEMFLRLLQFGEDFVENMKTLGFFSPDAKLLFSLDTDTIFVTRRCFAI VSKANKLINETYDKLVTVGVDDTAVKDIDLLSKAHTHAELYAKEYGNDLARLWSHNEE SQFPSFFAFQKCTVSASTISFVNLLRDNVKAAFACEDEGARAKLALTAENIVRLYVIQ SPRKHAELFSSIPNMSAIFYNNCHYISHCIMTMSFEASGENQKTLLEPLLVDSVIRLR NVAADCMEKTLTRCRREMSAYLEDHSIFEHLPASYKTTKSTFATPDQMVEMADLLVPK EEPKMIKCLAACLLHIRLIAQNLREPLTEVVYCKVIGSLISFLLDSLVRHVVTTSDFR ENDANVMADVFKRLLEVVANIVTYREQSKVTDFCAREYFRLNEIVFVLGNRMQDIEHR WFNAKGPMAEHLSRSEVVGLIKALFADSQHRTDLIARL" CDS join(131655..131694,131884..131997,136227..136483, 137382..137507) /gene="Cbr-exc-9" /locus_tag="CBG_17716" /standard_name="CBG17716" /product="Protein CBR-EXC-9" /note="C. briggsae CBR-EXC-9 protein ;" /note="Predicted" /db_xref="GOA:A8XRG4" /db_xref="UniProtKB/TrEMBL:A8XRG4" /protein_id="CAP35238.2" /translation="MPNCPRCQKPVYFERGKAILQPLLRSNVWTTWIRSWRCRIAHFP SRTDDWTGWHELIAYGIILNVFGAALLLIKAQLDKDVIKAAVDQKFRDAGIRVNSTDG TDEEEEITEPSAVLLVMITMGGRMANVVGTMKLYKGLGKYLSDRKRKKFQSTTERIQN GEAETECTELLADCCQVC" CDS complement(join(137670..138030,138080..138192, 138329..138613,138659..138797,138843..138981, 139592..139817,139862..140503,140548..140723, 140901..141111)) /gene="Cbr-bbs-2" /locus_tag="CBG_17712" /standard_name="CBG17712" /product="Protein CBR-BBS-2" /note="C. briggsae CBR-BBS-2 protein; contains similarity to Interpro domain IPR016616 (Bardet-Biedl syndrome 2 protein)" /note="Predicted" /db_xref="GOA:A8XRG6" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR016616" /db_xref="InterPro:IPR029333" /db_xref="InterPro:IPR029429" /db_xref="InterPro:IPR029430" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:A8XRG6" /protein_id="CAP35240.2" /translation="MDGDETPEEQFEIGDSSQVPHFDENVELKSVFNFSLNQRIMEGC VVSAILEPRGVETIVAVSMTNKVIIKDVESPLNITETIRCIAAAPIGDGYDCIVIGTD ASVICYDVHNNLTVFRNDVPDGVNCFAYGKLGDLEEAIYCGGNCCIWGFDKTGANTYW TVTGDQVTTMCLSDYDGDGETELVIGSPDFEIRVFKNDLMRAELMETDEITSLAHVTN GCFAYSLNNGTIGTYVMKERQWRIKSKSNVSKIFNIEEQGLMVVVWKQGKVDLRFAHN GEVLSRDSVPTPVASATCSRNAEDATITVVCLDGKAKTFKVQKATSGAVDKTQQMIRE FGQKKHNLMMELSNYEQEEQMTEAEKAGDFRIPADTEVGVMFIVNCEVQLLSLRVEAT HNIPIRGVLIFAEGLFEGESYIWLVDIPNYKKNLLRIPPNEHQSRSAIDIPLVIDKDS TNDLHTKVFLGHVDSNKLMVMENTRILPRFCRFTPLKAEYSKFFIMPTGFIKFDINTR AAKLSEWVSESFTIDASLLDMFDEPEGEFKFMGLRPKHEKSLMFKITQSDKTFTIYHD DIETMGALVQSYASFFQIQHMECVANFPDVFKEAEEILEELEPMTEVRDRLTAELQER QAAVKEILIRAEDSIAIDDIPDARKFYIRLKANDAAARQAAQLRYRLYYGSGENLEKT FQMEQSRKMCEISETSEQDNRELLKTSWFVLTVVRNLILIFSVFFSVGEPGRQIVVTC RAAISEDNKQIVTKVLQYGASSQ" CDS complement(join(141932..142378,142657..142879, 142956..143171,143219..143951,144159..144249, 144313..144553,144617..144738,144793..145278, 145446..145645,145695..145947,145949..146207, 147237..>147532)) /codon_start=1 /gene="Cbr-gcy-8" /locus_tag="CBG_17711" /standard_name="CBG17711" /product="Protein CBR-GCY-8" /note="C. briggsae CBR-GCY-8 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00211 (Adenylate and Guanylate cyclase catalytic domain) , PF01094 (Receptor family ligand binding region) contains similarity to Interpro domains IPR002290 (Serine/threonine- / dual-specificity protein kinase, catalytic domain), IPR000719 (Protein kinase, catalytic domain), IPR001054 (Adenylyl cyclase class-3/4/guanylyl cyclase), IPR001245 (Serine-threonine/tyrosine-protein kinase catalytic domain), IPR001828 (Extracellular ligand-binding receptor), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /note="Predicted" /db_xref="GOA:A8XRG7" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001054" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR001828" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR028082" /db_xref="InterPro:IPR029787" /db_xref="UniProtKB/TrEMBL:A8XRG7" /protein_id="CAP35241.1" /translation="FLLFLLLNSPALGQETERILANNGTEDGENVPSKGTSPNTNPLF LSNSTAGLYDSKGRIRLTIGHIGAIGALRNDVKILEVSHKSLQAEGILDDDLDVEIIS QTGCGESYEGVAVAADMYHLQKVKAFIGPYCNAEMDAVARMAAFWNIPIVGYMAASNN LADKNAYPTLSRISVSSALTDSKNFRSFKLRTTNSIAEATCAMLRHYGWSKVAIITNT GVVAYDRVLSFEEVFHQRGITVVKKIMFDEFADSKAMVASGLLNDIKNSARIVVCLFS NTRESSREFLTAANSQGMSVNEYGYVFPWLQDGGKDIAPWTGSDGSMLQKVKDQYANA IIIDDANSFDNTIVGPFVEKIKDVGLTEADVDIANIYGYLYLFDALKLYALAARKVLN ETGKAENLLNGRMIWQNMRKMKFVGMVGASGIASGQVTMDDRAERAPLYRGFFVSPNT DAVLPMVHMEPTMLDNCDGIANKSGCYEIIVTDMMKDFWPSIDRKMPKDEPDCGYRNE RCDYTLIIIGAALILLFIIAAVSIFFAQKLLEKRALDKLPFRIYRDDLQFIDEEQLKS MLSLGSTRTKMSNMNYGSRNHAIVGTNTHAIYHKYVQRRPIVFNRADKTLIQLKDSFK FALNLLKFSKQLLKSRYCYDCSKMNAAVHDNINPFLGMVWNEREEMLLVWKFCSRGTL QDIIYNDNITLDTKFHGAFIRDILAGCEYLHASQIGYHGSLTPWSCLIDRNWMIKLTD YGIADPLERWEKQQSISRDALTSDDDKSQATQSTSILYEAPEMLKNREKNRTRRVDQE WIRQTQTRRQLGDIYAFGLVMYEIIFRSLPFPEGTNQMELVEWLRDGTKVVKPTIAQN KVLNMDLTALIQDCWNTTPEMRPSLRRIKLNVETYLNIKGSLVDQMTRMMEQYANNLE KLVAERTGMLEEANQRADRLLSQLLPAYVANELKLGRPVPPKTFTGSTVLFSDIVGFT EMCQHATPLEVVSVLNGIFDGFDQFIARKDAYKVETIGDAYMVVSGVPEENGHRHINE IASIALDVHKFLSEFIVPHKRDTKVQCRLGFHTGPVAAAVVGLNAPRYCLFGDTVNMA SRMESNGEPGKTQISEAAKNLLLKEYPDYICEQRGEIPIKGKGMCMTYWLMGTKSEGA GLSGAYMAPSMKSAGTGFSGMLGNTTAADYSLNLRNPTGLQK" CDS join(148143..148319,148369..148590) /gene="CBG17710" /locus_tag="CBG_17710" /standard_name="CBG17710" /product="Protein CBG17710" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRG8" /protein_id="CAP35242.2" /translation="MKVAVLLCLILLEVLDGLTYNERLQFLQLQNAAYNMYIRTIGER KQKNNVFKSWYAATTEFPPLKSEFFENDTVVGDSQKNSAPVSMDLVYSRPRTVDDDIG MPLNQPIYTKDKTNFYNYGKLYQNYWQNGK" CDS complement(join(149183..149613,149624..149651)) /gene="CBG26453" /locus_tag="CBG_26453" /standard_name="CBG26453" /product="Protein CBG26453" /note="Partially confirmed by transcript evidence" /db_xref="UniProtKB/TrEMBL:B6IKP0" /protein_id="CAS00470.1" /translation="MERCVEVRSLSSADWNNGELGGNNSSTDGGGDFLGALDSESNVT VVVSDGNESLEAGTLTGTGSLIVQICKLIKDLRGLLLDWRDLEDFVLKVGAKSIDDLE LLDWKRVEVDLLEGGDLLLLDESSELGHWSPFGFLLSSTSGSRISNLTSS" CDS 149681..149938 /gene="Cbr-rps-2" /locus_tag="CBG_17709" /standard_name="CBG17709" /product="Protein CBR-RPS-2" /note="C. briggsae CBR-RPS-2 protein; contains similarity to Interpro domain IPR000851 (Ribosomal protein S5)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XRG9" /db_xref="InterPro:IPR000851" /db_xref="InterPro:IPR005324" /db_xref="InterPro:IPR014721" /db_xref="InterPro:IPR020568" /db_xref="UniProtKB/TrEMBL:A8XRG9" /protein_id="CAP35243.2" /translation="MVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTAAKGSTATLGN FAKATYAALQRTYSYLTPDLWKEEALEKSPYQRHHEFLARN" CDS complement(join(150449..150524,151118..151203, 151253..151290,151339..151471)) /gene="CBG17708" /locus_tag="CBG_17708" /standard_name="CBG17708" /product="Protein CBG17708" /note="Predicted" /db_xref="GOA:A8XRH0" /db_xref="InterPro:IPR018784" /db_xref="UniProtKB/TrEMBL:A8XRH0" /protein_id="CAP35244.1" /translation="MAKSLRSKFKRKVRAIARTKKQPKTDAFLQKAIEKRDEYEKVEA EKAKAEGTDGGDKMDVTGEAATINTKTLRKKDGSFPSWLSGTQKKKATKKSKAIKKSK NKSAKNFR" CDS join(151827..151886,151935..152017,152062..152301, 152345..152453,152502..152732,152783..152902, 153261..153340,154505..155006,155053..156034, 156081..156529,156579..156623) /gene="Cbr-xpo-3" /locus_tag="CBG_17706" /standard_name="CBG17706" /product="Protein CBR-XPO-3" /note="C. briggsae CBR-XPO-3 protein; contains similarity to Pfam domain PF08389 Exportin 1-like protein contains similarity to Interpro domains IPR013598 (Exportin-1/Importin-beta-like), IPR001412 (Aminoacyl-tRNA synthetase, class I, conserved site)" /note="Predicted" /db_xref="GOA:A8XRH1" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR013598" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR040017" /db_xref="UniProtKB/TrEMBL:A8XRH1" /protein_id="CAP35245.2" /translation="MFGTNGSAGIAVTDPTKQEEIYRALETLKKDELGWKKSVESFIG PHKPPPEEQFLLLQVIEDFLNKRYHSSNSQDVAIIRNFLLHYTKTSRSSPEDQPVFLT NKMAHIFSLVFAADFPERWSTFFNDLFFNDNITDRKVAFFYLKVLLAVDVEVVNRDIQ RTKLESDRNIKIKDAMREICINEIAKSWLSIANSLSGDDVIQCLILENIASYVDWIEL DLVANDYVMTYIISKFQNSATSEAATSAVCGLLEKGMPAEKKVGLALTIMAVLRNSGL LTVNDNNDEDEVTRVGSLVNTLGLVLLDVQNKLCASSILEKEQSCCVQEMAGLAESAI VVLNNEDPDLSCLCVDYIRAYASFLVKFHPNVREDRQQDFIEKITFQDTNFIEKVIRT GLLRYVMGDDLTVGGDGEDEVEFQEYRKELRSMLNVIGLKRPEAIVNAIEPWTAEVTA GGSSIPVNRIEALLNIIFHLHEIIPSNMLQTPREGISQRAARLPIVILEGLVLDGRCP AVHVLYFELACRYERLLVLQNQPVTITHIAGAFLDQRGISIPSANVRTRIVYLFCRFV KSHKTVLGPLVSEVITRLAPLLAVSPQSEANQLLSPDDQGYIFESTATLIVFGDLSSE MKSQYVGELATTLAMKFENGLVELNAARARKADEETIQSILQFMANIIGYSSRMSKAF NNAQSMKACNCIEIYLKLVKLFVETLSPENAFLLESTRQFAHRLVVSMEEELMPYMSG IFDKLALVSTDLDSMHHLLIFCHQTVAKYKKAMLTSGVDLGNVLAIAARASLQEQENN VPAKDDSQRALLYVQRAFVQLLFTVIVSDCTPALNNTPGLIDHVLEAAARLALSSDQT AQKVALASLTKISPIIPSWSARTLRVALEIPSLPHITPSDAGSTLVVHEVCATLTSLH QSDPDGFSRALRELVPNGFSDELLSALNTLKGKNLDKQVMNLYASLKNQTSQ" CDS complement(join(153422..153554,153599..153966, 154086..154208)) /gene="CBG17707" /locus_tag="CBG_17707" /standard_name="CBG17707" /product="Protein CBG17707" /note="contains similarity to Pfam domain PF00014 Kunitz/Bovine pancreatic trypsin inhibitor domain contains similarity to Interpro domain IPR002223 (Proteinase inhibitor I2, Kunitz metazoa)" /note="Predicted" /db_xref="GOA:A8XRH2" /db_xref="InterPro:IPR002223" /db_xref="InterPro:IPR036880" /db_xref="UniProtKB/TrEMBL:A8XRH2" /protein_id="CAP35246.1" /translation="MLILSFCLLLLSAGSVRGQGADWLCESLICDPPKKCLIVDQVAQ CLVENTPSPPPFGTVNGGQPLFPPAPTQTGSPTPNIPAPLAPTPTIPPSTQPTPTTPS SPFAPFLNLFGGGTPGAPAPTLIPPFTLPTLPTTAPPTTPDPVDVCTLPPVTGSCSRA RIMWYYDNESRKCERFSWSGCGNQNRFASKMQCEQTCSQNSLFKRNF" CDS complement(join(157139..157319,157369..157650, 158010..158230)) /gene="CBG17705" /locus_tag="CBG_17705" /standard_name="CBG17705" /product="Protein CBG17705" /note="contains similarity to Pfam domain PF01423 LSM domain contains similarity to Interpro domains IPR001163 (Like-Sm ribonucleoprotein (LSM) domain), IPR006649 (Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type)" /note="Predicted" /db_xref="GOA:A8XRH3" /db_xref="InterPro:IPR001163" /db_xref="InterPro:IPR010920" /db_xref="InterPro:IPR039267" /db_xref="UniProtKB/TrEMBL:A8XRH3" /protein_id="CAP35247.1" /translation="MNDDFDIEKFTIDLKETHPDLVEGLEDTSDSGNEFQPDAYEQKM IEEHPELAERIYESDEQSVKEEQEKRVSNKQKDRNRRANLEKMMVPGRKAVEDKEGTF HDNILKIKKDSPMKMLADAVRDGTKIHVRTRAAVRIDRVFEGVPITFDEHFNIMMRDV TETILHGRKSRKEVGARKQLQSVLPEFLQWKEGTKWPLPIGANSLLEERFQRACFIKG DSVVLLYKL" CDS complement(join(159295..159783,159832..160132, 160181..160636,160694..160872,160923..160987, 161039..161109,161157..161329,161380..161487, 162235..162555,162598..162693,162747..162815, 162865..162900)) /gene="Cbr-ntl-4" /locus_tag="CBG_17704" /standard_name="CBG17704" /product="Protein CBR-NTL-4" /note="C. briggsae CBR-NTL-4 protein; contains similarity to Pfam domain PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) contains similarity to Interpro domains IPR003954 (RNA recognition motif domain, eukaryote), IPR000504 (RNA recognition motif domain)" /note="Predicted" /db_xref="GOA:A8XRH4" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR003954" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR013083" /db_xref="InterPro:IPR034261" /db_xref="InterPro:IPR035979" /db_xref="InterPro:IPR039515" /db_xref="InterPro:IPR039780" /db_xref="UniProtKB/TrEMBL:A8XRH4" /protein_id="CAP35248.2" /translation="MSTCSDEMSDKECPLCMETLELDDINFYPCKCEYQICRFCWHRI RTDENGLCPACRQPYPEDPVNFKPMTSDDVRKHKDEQRQKKQAEKTKLSDARQHLCNY RVLQKNLVYVVGLSPRVSDPEILKKNEYFGRYGKIQKIVTSEKASLPAPHLPPSHTAY VTYKRVDDALRAIIGVHNSMLDGRLVKASLGTTKYCSSFLTSRKCFKPVGECMYLHEN AEPEISFTKEDMHLGKHTEYEKRLIDALSSKAPPPQSSLASQLDKILAPAVNTHSSPV RRPHSEIPSADVERTGSATHNSTEELDDDRDSTNTSNSIDDPAPSNPADETISNKRSN ATARERQWSERDEASVAPSNTPPTDPEGNENEFEEDINRGDVNDLISRLDVNEDRLDR TSLSEHDYLHSGIPAPAVHQEAPAPLMQWGALLGFSSADTAIDPPSLFPTFNVESFNS QSLFGTQTSNTNTNTNSFRREPSPPPGLGKFSSDDDLGFDPFTESSKGLTALLREEQE QVPPRHQPGNTNDLLRQLFGQLPEQRQPTQQFQQNYHQQQQHHHQQQQQQQNHHHHSM QQHQENSLLHQLHAQQQHQQQQMAADMHRQQDLLYSRMQQQHQQRQYDQSLNFSSPFG NMQHHSSQQQQQQPQSANLLHELFNQQQHHQQQQQQQQQAQQQQMYAGLNSYMYNDMM RPRVPFGMAPPPGLGAPSTNRPQMQQQPQQSHISQQQSMGLFGMGNNMMPDQSSQQGR EAQDAFKALLPNVNVRFMDESRWSQENSLRSSTVVPPPPGFSSVMNR" assembly_gap 162051..162060 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(164126..164238,164283..164352,164624..164790, 164836..164998,165048..165196,165242..165377, 166287..166379) /gene="CBG17703" /locus_tag="CBG_17703" /standard_name="CBG17703" /product="Protein CBG17703" /note="contains similarity to Pfam domain PF07967 C3HC zinc finger-like contains similarity to Interpro domain IPR012935 (Zinc finger, C3HC-like)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XRH5" /db_xref="InterPro:IPR012935" /db_xref="UniProtKB/TrEMBL:A8XRH5" /protein_id="CAP35249.1" /translation="MEVDSANNRHAAVLKRKATDSINEVLSFGQSSSSPQKRTKKTPL HKIRDVEAYKKIIKTYKAPTWFGCAVSPRDLADYGWECVKKDCVKCVECEELLCTSLP NICKVSFNVYNSRLQEIHDQLSSAHRTTCKLRTGAPPIRFTEPTSKEIMSGIQSRLSD SKSIEDDDFVVHIPSDVNLPKLEGISDRLMYVAALGWHVTKPRRGTLMFGCDYCAREL AIRCGNGFDPIHNHERWCPRIDMDEHGEPSWQSDISIVLNTKNRVSHRYSGSSIFKEA YAARRLIDSSLSTIISPNLL" CDS complement(join(167003..167097,167737..167921, 167968..168191,168283..168506,168552..168820, 169118..169191,169627..169986,170431..170484)) /gene="CBG17702" /locus_tag="CBG_17702" /standard_name="CBG17702" /product="Protein CBG17702" /note="contains similarity to Pfam domain PF09727 Cortactin-binding protein-2 contains similarity to Interpro domain IPR019131 (Cortactin-binding protein-2, N-terminal)" /note="Predicted" /db_xref="InterPro:IPR019131" /db_xref="UniProtKB/TrEMBL:A8XRH6" /protein_id="CAP35250.1" /translation="MPNLLEDHFDPTFQSTSKKLVLPTNRKQPEYDNVPEEPRVNDFS SDELMKLLAFMEGEVQAREDVIDHLKKERTKILLAEAKYGKLNMNDPFAALRRDSAIT GEQINEDKIVQMYESQVDQLDKMMDVQKKSQRNAAVLLVALEKKQHKLVKKLEADREA KIRYAKQGDDLVAHLEKERNQLQQQIEFHIEEKRKAEIAKDKMEMTLGNEKKRHESIV LYLIQERKQMLLKMHELRVKAEKMMLAQSSDPNKPGSSNALNERELIEELKKEVTFLR AERESLTKTQKMVKTENLSLRETVRGQEADLQMLRRNLTLTGAKMSIDKPGHQLPQLA PDSLVTANRGAKTAPATRPQPAPQAARIPNSSTFPTEKSRLPRAPPQTPTAPAPRVPI GSIPASSSNPPRTMSSPVKKTPVMGVSSTSVRRPQSASSTMPMTSVITNTSAVRPLSP EIEKLEAALQSISAGPATNVASERKMSGTVKRNGILAKAFGSSK" CDS join(171725..171759,171975..172157,172204..172383, 172432..172642,172826..172990,173037..173212, 173258..173441,173496..173723) /gene="Cbr-arp-11" /locus_tag="CBG_17701" /standard_name="CBG17701" /product="Protein CBR-ARP-11" /note="C. briggsae CBR-ARP-11 protein; contains similarity to Pfam domain PF00022 Actin contains similarity to Interpro domains IPR018181 (Heat shock protein 70, conserved site), IPR004000 (Actin-like)" /note="Predicted" /db_xref="GOA:A8XRH7" /db_xref="InterPro:IPR004000" /db_xref="InterPro:IPR027127" /db_xref="UniProtKB/TrEMBL:A8XRH7" /protein_id="CAP35251.2" /translation="MSDDVTRSARKMGKLASNTQAVLESLKAARRSSSGVSTSSILSV SSTALSQAISSIDNGKSAVIVEVGSKLTKVGCAGELNPRLIIRTEYTDDNGNLVTADE ILALNDRKTASKSIEYYEDLLHKFLKMIFLRVLAPTDRPVIVVESMFMSEDLRKTMTK VIVERIRCKSLMFMPSHVCATFPFNTQNALVVDIGYSECVAVPIIEGVTMLNEFESAR SVCGRQLERRVRELMEKYGQLEELGGERRALEEADWEDINNIRLIETLSVSLICLDRE RSEKWKEWEAAEGEKPSMEVLCEENLVPVGGKSIVVPPVVFETSVEIFFDESLNPDSF DSSLPKILHRLVSKCSIDLRRKLFPNILLAGGVSTIPGLMKRLEQEIQYIDEKNETKF AEVVKFYQFSEIKNSPLFVSWVGASLLGSLRETIERRSLTLDEWKTGKLAADWTDMIV KAR" CDS complement(join(173881..174000,174328..174423, 174612..174668,174745..174856,178518..178591, 178755..178847,178898..179026,179074..179167, 180940..181021,181530..181643,182567..182692, 182973..183038,183819..183915,191372..191422, 192409..192500,193901..194012,194971..195218, 195813..195897)) /gene="CBG17698" /locus_tag="CBG_17698" /standard_name="CBG17698" /product="Protein CBG17698" /note="contains similarity to Pfam domains PF02142 (MGS-like domain) , PF01808 (AICARFT/IMPCHase bienzyme) contains similarity to Interpro domains IPR002695 (AICARFT/IMPCHase bienzyme), IPR011607 (Methylglyoxal synthase-like domain)" /note="Predicted" /db_xref="GOA:A8XRH8" /db_xref="InterPro:IPR002695" /db_xref="InterPro:IPR011607" /db_xref="InterPro:IPR016193" /db_xref="InterPro:IPR024050" /db_xref="InterPro:IPR024051" /db_xref="InterPro:IPR036914" /db_xref="UniProtKB/TrEMBL:A8XRH8" /protein_id="CAP35252.2" /translation="MWHIEFYKTIHLIQYIDELCEMTDGKTLAIISVSDKTGLLPLAE GLVSAGLVLVASGGTAKAIRDHGINVHDVADITKFPEMLGGRVKTLHPAVHGGILARD SESDRKDLETHNISFVSIVVCNLYPFKKTVQQSNCSVEEAVENIDIGGVTLLRAAAKN HERVSVICDPADYDNILSELKSGGTTRERRQLLALKAFEHTTSYDESISGFMRRRFAG NGERALPLRYGTNPHQKDDAELYIVEDEMPIKVLNGSPGYINILDGLNGWQLVKELSD ATKMPAAASFKHVSPAGAAIGLPLNETESACCMVSDLPIDPKKASLAAAYARARGADR MSSFGDFIALSEKCDELTAKIINREVSDGVVAPDYDPAALSLLAKKKNGNYCVLKINP NYLPSETEERTVFGLRLRQKRNNAVINAETFTNVVGKENGLNKQAIDDLIVATIALKY AQSNSVCFAHRGQVIGMGAGQQSRIHCTRLAGDKAVNWWLRQHPTVLSLPWKNAIKRS EKSNAIDVMCSGVLGSEIAVDQWQQYFNEPVEPLAEEERKQWLSQQTGVVMSSDAFLP FRDNVDCAKQFGVSYVAHPGGSVRDEEIKEACDEHGITLIHTGLRLFHH" CDS join(<175904..176162,176273..176329,177035..177165, 177217..177312,177615..177797) /codon_start=1 /gene="Cbr-ilys-4" /locus_tag="CBG_17700" /standard_name="CBG17700" /product="Protein CBR-ILYS-4" /note="C. briggsae CBR-ILYS-4 protein; contains similarity to Pfam domain PF05497 Destabilase contains similarity to Interpro domain IPR008597 (Destabilase)" /note="Predicted" /db_xref="GOA:A8XRH9" /db_xref="InterPro:IPR008597" /db_xref="UniProtKB/TrEMBL:A8XRH9" /protein_id="CAP35253.1" /translation="TGSQILSLIKSFSVYFCISHLFFSSSRLQYWSNKRHRSSGQTKW AWRTAAHRKKKSLLKRRSEGPEGSLHTFAHSSISHLIRYLIPATLILLLISVTSQLLM FDKVEDDHPCLLSMCDQDSGCVPLGCSVDQFERIGCGYFRLNIYQFQQCYQPGKKDEE TENEAWMNCAQDYQCSASCIRTLASKFRVKCYGKSDCETIARIHDGGANGCRDRGTIG YWKRVRDSCGPECNKPIFTRHFY" assembly_gap 186856..187807 /estimated_length=952 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(196431..196545,200588..200784, 200831..200941,201016..201123,201998..202129, 202179..202283,202396..202559,202607..202667)) /gene="Cbr-srt-73" /locus_tag="CBG_17697" /standard_name="CBG17697" /product="Protein CBR-SRT-73" /note="C. briggsae CBR-SRT-73 protein; contains similarity to Pfam domains PF10328 (Serpentine type 7TM GPCR chemoreceptor Srx) , PF10321 (Serpentine type 7TM GPCR chemoreceptor Srt) contains similarity to Interpro domains IPR019425 (7TM GPCR, serpentine receptor class t (Srt)), IPR019430 (7TM GPCR, serpentine receptor class x (Srx))" /note="Predicted" /db_xref="GOA:A8XRI0" /db_xref="InterPro:IPR019425" /db_xref="UniProtKB/TrEMBL:A8XRI0" /protein_id="CAP35254.2" /translation="MNESTSTISNDELQLDFVGLGPVEFPVYDSDEYWGREVPYAVFI LIFCIFFIILQFLVMRVMITDKDLKKLPAFQIMFMISFFDTIQLFVHLTAVFYILNSK PHFNLPDYLIGAVMNASWVSMLILSIFLNLNRLISIVFHFKSNRIFSPFTMKIYFSII LVIWCIVCFLNSVGYSRMVYLLPAYTWHYASAKPLSAFLRTVSANISLVDVLFSLFAH VSIFSYIYFKAALLSRKELILTIQVVCVSVFHVIGYLTWEYFPIPWDLPIGVFIGHVV WMVWNAINPMLYVLINPRIRSLVLASIGKQTEVSGRTLFVASHVSTVRQSGTKL" CDS complement(join(209033..209166,209291..209363)) /gene="Cbr-flp-10" /locus_tag="CBG_17695" /standard_name="CBG17695" /product="Protein CBR-FLP-10" /note="C. briggsae CBR-FLP-10 protein ;" /note="Predicted" /db_xref="GOA:A8XRI1" /db_xref="UniProtKB/TrEMBL:A8XRI1" /protein_id="CAP35255.1" /translation="MQLSAVFVFLVLCLAAVFAVPLKDASRARREVAPSEKRQTKSRS GYIRFGKRRVDPNAELLYLDQLLL" CDS complement(join(226029..226168,227046..227343, 227394..227537,227587..227698,227751..228033, 229975..230047,232441..232863,233447..233675, 233820..233961,234008..234170,234242..234298)) /gene="CBG17691" /locus_tag="CBG_17691" /standard_name="CBG17691" /product="Protein CBG17691" /note="contains similarity to Pfam domain PF10545 Alcohol dehydrogenase transcription factor Myb/SANT-like contains similarity to Interpro domain IPR006578 (MADF domain)" /note="Predicted" /db_xref="InterPro:IPR006578" /db_xref="UniProtKB/TrEMBL:A8XRI2" /protein_id="CAP35256.2" /translation="MAMTLLENYYLLLQEIRGQQPPNFDDTSRGVLLALIKERPTIWN STAKLTKEDVLASFGQVAGFLSNMNPDFSMWAIIEKWCWVVESFYRCTLTTSPTEWRY NNVLDYLKPYCNPHYPYLGCLPKKRRNELTQLYADPEIIKVMEATEEYNFSEGLFRDE MHALAGDEQIDFGAMLSRLTVGQVVNSKRRGRPAKEKQRSPVDAFINLTPQSAQFQKL LKQANGSNFTALSFIEPADDGVDEFNFGFTPAMYSALIELVHEIPQIWAPKYVPKGSS QTREQHFEDIARRMVVKFNGTVDVVTTEKWTGSFMEGVYAKLREKFVNEEKSKTPSTW RYYEALKFTSTEHPMPALTLADVFIKSEDPSTSFSGFPSRATVASPAGSSQSEDSRMA ASSPSAATQFGMSSNGNKSIKLVLENLVARSLKEEQGVNGGGLAGTIPVTDYAELKNM LEQGKLMNSENGPPAKRMRPEGSSSPPGSSRMIVYNDGRKGTQPPTATWVPPREDLLA KQPKEDLIATPPQKRAQATAVVKSGFPLEKQLRKIFQTGVPNMAGMIPVTSASLQRNG LITGLNGMGLQQSALQQALLKKMEPSTTMAASLPPMPSVSSSQLLQAQAMMNGTSSST NGNATANGEVDDKWSLLGKLICTMAREVEARDPLSGCDLFKDLQAVMYKHSVESLRPR DNNSS" CDS join(248129..248254,248557..248697,248744..248829, 248873..249530,250230..250457) /gene="CBG17689" /locus_tag="CBG_17689" /standard_name="CBG17689" /product="Protein CBG17689" /note="contains similarity to Pfam domain PF00085 Thioredoxin contains similarity to Interpro domain IPR013766 (Thioredoxin domain)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XRI3" /db_xref="InterPro:IPR013766" /db_xref="InterPro:IPR036249" /db_xref="InterPro:IPR041862" /db_xref="UniProtKB/TrEMBL:A8XRI3" /protein_id="CAP35257.1" /translation="MNLANVLSLLAACLLSPVAGQEYKEAVELSSANHDHVLGSATVV FVAFCADWCPFSRRLKPIFEESAKVFHQENPQASAIWAIVDSQRQADIGDKYFVNKYP TMKVFVNGELISKEYRSTRSVEALTNFVKYQLSTAINEFSSQDQLSQEMDKSKRNVVA WLKKDGPEFANLKKVASILREDCSFWVPTDHFGTQTTENKLSFFDPDTNEEAKFTGNF NDYDFVKQWVTDKCIPLVREVTFENVEELTEEGMPFLIYFRDPDNKSTDKVFGEAVAR ELYDQRAAINPLLADGHKFAHPLKHLGKTKEDLPVLAIDSFQHMYLFPDMTQMNVPGK LREFVMDLHSGKLHKEFHENLDQRMIELAKAKAARGITDDHDTQAPSARPIDTTPPPS VFKELKPSDKRYSILQKSEL" CDS complement(join(250742..250933,250981..251185, 251233..251362,251409..251502,251548..251667, 251712..251816)) /gene="Cbr-mvb-12" /locus_tag="CBG_17688" /standard_name="CBG17688" /product="Protein CBR-MVB-12" /note="C. briggsae CBR-MVB-12 protein; contains similarity to Pfam domain PF10240 Protein of unknown function (DUF2464) contains similarity to Interpro domain IPR018798 (FAM125)" /note="Predicted" /db_xref="GOA:A8XRI4" /db_xref="InterPro:IPR018798" /db_xref="InterPro:IPR023340" /db_xref="InterPro:IPR023341" /db_xref="InterPro:IPR040335" /db_xref="UniProtKB/TrEMBL:A8XRI4" /protein_id="CAP35258.1" /translation="MTELEFSADNVTPAVPITAMCIVADKSKAPRGFVPIVKCQDDQG EADLWRDGFFTINRQVRYICTSTEIPDSNIRTPVQVITNLIIVRESDPIPHGYVAIDY TADSREKSLRKKYVCIRTEPRDRVVDAIGEIIILGKTKKVPRDYTSAGDIDSLLICYK VIPIPQTYGIQTSNSTSNLETQQQSTGGLYPGLPNLSSSTPANLDVTGASGSTAFTMK NVGAPRVKAIDGIDFKVNPMFVRTDSSDGSSKLPDLSQFTHLDQNRLEDKYNYSFATE HSVLS" CDS join(252768..252843,252889..252953,252998..253498, 253545..253701,253749..253855,253946..253987, 254190..254269,254317..254377,254426..254572) /gene="CBG17687" /locus_tag="CBG_17687" /standard_name="CBG17687" /product="Protein CBG17687" /note="contains similarity to Pfam domains PF01546 (Peptidase family M20/M25/M40) , PF07687 (Peptidase dimerisation domain) contains similarity to Interpro domains IPR010159 (N-acyl-L-amino-acid amidohydrolase), IPR011650 (Peptidase M20, dimerisation), IPR002933 (Peptidase M20), IPR001261 (ArgE/DapE/ACY1/CPG2/YscS, conserved site)" /note="Predicted" /db_xref="GOA:A8XRI5" /db_xref="InterPro:IPR001261" /db_xref="InterPro:IPR002933" /db_xref="InterPro:IPR010159" /db_xref="InterPro:IPR011650" /db_xref="InterPro:IPR036264" /db_xref="UniProtKB/TrEMBL:A8XRI5" /protein_id="CAP35259.2" /translation="MSEDIGVTRFREYLQVNTEQPKPDYVACRDFLFKYADELGIERR SIETAPGTFFVIMTIPGSRPELQSIMLYSHTDVVPTFREFWTHDPYSAFKDEQGNIFA RGAQDMKCVGVQYMEALRNWFAKGVKQWTRTIHIVWGPDEEIGHINGMKGFAVTEEFK KLNIDFALDEGIACDDDVYKVFYAERIPWWVKVTLPGNPGHGSKFIEQTAVEKLHKLI ASVDEFRNEQKALLAGNPELTVGDVTTSNVTIINGGVQVNVVPEKFEAYIDIRVTPLQ DLDVIRARVDQWAKDAGEGVTYEFMQSTNPADKSTVDSKTFSNCKLISPSTREDPFWA AIDDGLKKEGCKYKKEIFIGATDSRFVRAQGIRAIGFSPIINTPSLLHDHNEFLNEKT FLRGVQIYETLINNLANVN" assembly_gap 255613..255622 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(256057..256125,256172..256585,256632..256730) /gene="CBG17686" /locus_tag="CBG_17686" /standard_name="CBG17686" /product="Protein CBG17686" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRI6" /protein_id="CAP35260.1" /translation="MLSIPRTPGRAPRFNSSGMHTPNFKIQKHSTPMPYDHFLHAAVS LKQHIVFGEQSHRPIATPDKAQMFAPAHTSTPATVRSGLLPPWEVQKTNAVRDRLPST IGFDKEEELSLDTSPESEHRPASVPLVNRALFRSEIPARPKTAEPVELRKAGNQPGSP SRKRNMKLTLAKTPYCARPTKSWLNRIKAPRDD" CDS complement(join(256917..257353,257404..258085)) /gene="CBG17685" /locus_tag="CBG_17685" /standard_name="CBG17685" /product="Protein CBG17685" /note="contains similarity to Pfam domains PF00642 (Zinc finger C-x8-C-x5-C-x3-H type (and similar)) , PF01585 (G-patch domain) contains similarity to Interpro domains IPR000571 (Zinc finger, CCCH-type), IPR000467 (D111/G-patch)" /note="Predicted" /db_xref="GOA:A8XRI7" /db_xref="InterPro:IPR000467" /db_xref="InterPro:IPR000571" /db_xref="UniProtKB/TrEMBL:A8XRI7" /protein_id="CAP35261.2" /translation="MHEFGRRPPILKAYRISQFSDTLLGSRCMAPFDSDRSLPLHTAI IMHIESSSRVRVLFSHPTCPAMKPCSHFLASTCRYNENCRFSHGYSVELERIEDYQEP DFMSIVEQGLVLVKGSSELWEIGRISAIDGQNVAVKLLKSGSEVSSKRKDLVPLGEIE EEVKKDESWKELKKETLGNVSVGESGNWNGGGIGMKLMAKMGYKVGEGLGKRSDGIVH AIQARICAKNASLDEVMTRKRRVVDGKDKSKRIKILKTSDESEKDIFAFINRKLETKS ERTMADVRKEKEEMAGYTSKALGSKKLDLESELKQLLGKQRKLNDGIRRNKNDKNTVL KMSISLREVDNQIASVNRKLSRVKNEVNSRNSKKKDEF" CDS complement(join(258863..259078,259125..259400, 259449..259853,259898..260074,260376..260559, 260746..260906)) /gene="CBG17684" /locus_tag="CBG_17684" /standard_name="CBG17684" /product="Protein CBG17684" /note="contains similarity to Pfam domain PF01148 Cytidylyltransferase family contains similarity to Interpro domains IPR000374 (Phosphatidate cytidylyltransferase), IPR016720 (Phosphatidate cytidylyltransferase, eukaryota)" /note="Predicted" /db_xref="GOA:A8XRI8" /db_xref="InterPro:IPR000374" /db_xref="InterPro:IPR016720" /db_xref="UniProtKB/TrEMBL:A8XRI8" /protein_id="CAP35262.2" /translation="MSDQPGEEQTAEVRQRRVPDSPEEKKHLKAPERDDVRPTSDESD MDALMQDDDRLERLTKSIPQDKGSLGEFADSMLESLPPRWRNWVVRGLFTVIMISTFT FIVNRGATWLMFLVFLIQFKCFQEIISIGLAVYRLYDFPWFRALSWYFLLTSNYFFFG ESLIDYWGIVLKKDNFLHFLVAYHRLVSFALYCIGFVSFVLSLRKGYYMRQFSLVRII FKSKVHKSFSQFAWTHLTLLLIVSQSFFIIQNIFQGLIWFLAPVAMIICCDVMSYMFG FFWGKTPLIKLSPKKTWEGFIGGAFSTVIFGILLSLALYNRPFFVCPVQHYQTDSSNC TIPLAFQLQDYPVPRPFSFIYKILRKEPAVQLCPFVFHSIALSLFASILGPFGGFFAS GFKRAFKIKDFGDVIPGHGGLMDRFDCQLLMGTFVMVYIHSFIRVPDASKLIKQIMTL EPNEQLDIFNLLKSELSKTGLL" assembly_gap 263122..263398 /estimated_length=277 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(264352..264457,265915..266480,266598..267083) /gene="Cbr-ric-3" /locus_tag="CBG_17683" /standard_name="CBG17683" /product="Protein CBR-RIC-3" /note="C. briggsae CBR-RIC-3 protein ;" /note="Predicted" /db_xref="GOA:Q60ZR7" /db_xref="InterPro:IPR026160" /db_xref="InterPro:IPR032763" /db_xref="UniProtKB/Swiss-Prot:Q60ZR7" /protein_id="CAP35263.1" /translation="MPKLTDRNRDRDREKKKRRRRDDSYDDYEEEGGISGWKLGLVVG VIVVCFAMLYPTLFHPMLMGFLGRSSQPAPSINQQRPPIHPAMGGGGGQRHPGGYPSR PDVHPAMRMAQAQAEGQSGGSKGMFTWMLPIYTIGVVLFLLYTLFKSKGKKAKRKKRN YFDSEDDSEDSEMETKYGGKFGKKKLKGLQERLRQTEDAMSKILEQLESVQAGANPVD LDAADKLALELEEDKSAKEAVGLTETNEQYIKDLEVALKEFQSLSKAYDKEKMKKLKR KDSSSEEEEEEEEEEEEEEEELSELSEVEEEEEEKPVKKGKKVVDQKKPAKKAILRQK STSEEEEETRIADKKAEEEEEEGIDIDFEIREHAERNKKDKNLRRRRPKKT" CDS complement(join(267447..267862,268278..268380)) /gene="CBG17682" /locus_tag="CBG_17682" /standard_name="CBG17682" /product="Protein CBG17682" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRJ0" /protein_id="CAP35264.1" /translation="MSKSLILLVLLAVSAFAVPNLRAKRAPEPQTEAIDGTTSELSPG DDTPAQFEEEASGEEEHHEHHMEASGEAPEKSSSVAAPMEPKMEEPKMEEPKIEETTT EETLSKEPEADEKPIEAATVISSAEETPSTTEVPMTSSEEPATSSETPVSSATSFVSS LFVLVCVYLIAM" CDS join(273298..273387,273934..274307,274359..274546, 274598..275130,275179..275319) /gene="CBG17681" /locus_tag="CBG_17681" /standard_name="CBG17681" /product="Protein CBG17681" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRJ1" /protein_id="CAP35265.2" /translation="MSLLLNPITVVPLIEAHPKASTLISIISISLKLEKEASEKRCHQ LQQDLNELRSKYESNLSETLRLQTPNGKVRQSSSRSERRQTLYKPSPATLANYVEESE VAERLDEANTMICKLESEKQTLQSKWETATESFVEAEKQIKELESSKSVLITEKEQLS KEFDAVRRENEENVEKISKNRKDLDGLLLKIAEYAKEIENRKQEKLTIEEKHGKEMDE ITNHHKSVKEELQSQIRNLSASNSNFSESQKEANEKEELLQQRLQSLSEEKSALQKEL ANKAQLLADAKNDIKECSKTSSELHSKIVEKSEMISTLKKKVEENDAELKIKAELIVS LEQDIAKKAELIKQQAAKLDENVTDKQDEITELKNLNEFYSKQHDEDSHAIANMMNTR QGKLSYVEKIRLDKMEQEKTIIQQRATIARLREANRPVLRSRNQEAAPQ" assembly_gap 273531..273906 /estimated_length=376 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(275531..275770) /gene="CBG26454" /locus_tag="CBG_26454" /standard_name="CBG26454" /product="Protein CBG26454" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IKP1" /protein_id="CAS00471.1" /translation="MSEDTASEYSLDEDDIANWDKMYMSERKTLFEQVLERHYEENRI ASQKPKKDNSTKTPNKTKKSSAIEKKKKTNKKKKK" CDS complement(join(276012..276164,276213..276414, 276461..276678,276725..277068,277266..277453, 277505..278992,279039..279286)) /gene="Cbr-klp-10" /locus_tag="CBG_17679" /standard_name="CBG17679" /product="Protein CBR-KLP-10" /note="C. briggsae CBR-KLP-10 protein; contains similarity to Pfam domain PF00225 Kinesin motor domain contains similarity to Interpro domains IPR001752 (Kinesin, motor domain), IPR019821 (Kinesin, motor region, conserved site)" /note="Predicted" /db_xref="GOA:A8XRJ2" /db_xref="InterPro:IPR001752" /db_xref="InterPro:IPR019821" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR027640" /db_xref="InterPro:IPR036961" /db_xref="UniProtKB/TrEMBL:A8XRJ2" /protein_id="CAP35266.2" /translation="MSQFIKTYGRIRPSANGSGTSPLVSTDKAVNVDLDNGRKTYELH RIFNSAATQEDVFACVSKKIVEDSADGFNGTVFAYGQTGSGKTHTMLGPTNSWSDPEH KGLIPRSIEYLFELLDAKTREFQKFTFSVNVEFVELYNEEIYDLLNLKNKVQLRDLGK EIQLDGAKSETVDNSLDLMHVVQRGWVSRSTGSTAMNNESSRSHALLIIKIKTQEVTG GLVKERSSTLNLVDLAGSERQSHTKATGDRLKEATNINSSLTVLGRCIRILSKPTAGS YVPYRDSHLTHILKNSLGGNSKTAVIVNMHPDREFLAESTSTLNFAQSCALIKNAATR NEVMTGDQENSYKKAIQELRQEVDETRAKVREEFGKRLDDSEEMQRRLTKENEELKAA KIDLQSQIDLARVKYLFNGDAEQSLEEHKKLISSLSDKSASSLYTVCVLMHLRMFNIR TFFQLKLEKEASEKRCHQLQQDLNELRSKYESNLSETLRLQTPNGKVRQSSSRSERRQ TLYKPSPATLANYVEESEVAERLDEANTMICKLESEKQTLQSKWETATESFVEAEKQI KELESSKSVLITEKEQLSKEFDAVRRENEENVEKISKNRKDLDGLLLKIAEYAKEIEN RKQEKLTIEEKHGKEMDEEKSALQKELANKAQLLADAKNDIKECSKTSSELHSKIVEK SEMISTLKKKVEENDAELKIKADLIVSLEQDIAKKAELIKQQAAKLDENVTALSEQNS LKRRIEEAIEIEENWKKRYAALEDKLQTEFNDHQRDIKNLKAKKDAEIKEYKETLQLQ SNMLKEQGTKAEKQLIQKRQEFDKKVEEMEQQFAQMSTAALKKQEEKIRRDSMLQYES TIQDKQDEITELKNLNEFYSKQHDEDSHAIANMMNTRQGKLSYVEKIRLDKMEQEKTI IQQRATIDRLSKGHREANRPVLRSRNQEAAPQ" assembly_gap 280706..280715 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(281999..282068,282119..282180,282231..282298, 282342..282565,282613..282798,283330..283517, 283565..283687) /gene="Cbr-sgo-1" /locus_tag="CBG_17678" /standard_name="CBG17678" /product="Protein CBR-SGO-1" /note="C. briggsae CBR-SGO-1 protein; contains similarity to Pfam domains PF07558 (Shugoshin N-terminal coiled-coil region) , PF07557 (Shugoshin C terminus) contains similarity to Interpro domains IPR011516 (Shugoshin, N-terminal), IPR011515 (Shugoshin, C-terminal)" /note="Predicted" /db_xref="GOA:Q60ZS1" /db_xref="InterPro:IPR011515" /db_xref="InterPro:IPR011516" /db_xref="UniProtKB/Swiss-Prot:Q60ZS1" /protein_id="CAP35267.1" /translation="MNAKAAQSLFGAIASSKKAPTREEPAVNFKSTNESLIKKNLQLK QQLSQCTKALEKLRNENIALREQNQELIDATLDEKMERIVEQRVKSRLAHAAVLHKKL VQNIQQTGLELGGIFKDMEPEPSGMVTRRAPKMECNLEKLDESPVRNFPRSDYEEENK SPMDIQNGPSSSSSMTQNLENGTPRMAQRASKGRRSELFHSLHENVPEEAAPAVGYKR APLLIAPSETPGGPPKKAPPRKAPTPRFKKPSTPAPAPISDDAEMPSTVRRQRSAKMN IKSMKEPSVNSKLRRPGKHDEPMPFIDTFF" CDS join(283943..284081,284423..284605,284652..285205, 285416..285808,285857..286123) /gene="Cbr-ntp-1" /locus_tag="CBG_17677" /standard_name="CBG17677" /product="Protein CBR-NTP-1" /note="C. briggsae CBR-NTP-1 protein; contains similarity to Pfam domain PF01150 GDA1/CD39 (nucleoside phosphatase) family contains similarity to Interpro domain IPR000407 (Nucleoside phosphatase GDA1/CD39)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XRJ4" /db_xref="InterPro:IPR000407" /db_xref="UniProtKB/TrEMBL:A8XRJ4" /protein_id="CAP35268.2" /translation="MRTFNVYGILLTFTCIIFIFSVLPFTIGSSSEARQRITRSVGDS ENDIKYGVICDAGSSGTRLFVYTLKPMAGGLTDIDTLIHENEPVVKKVTPGLSTFEDK PEQVVEYLTPLLRFAEEHIPAHQLAETELMIFATAGMRLIPEEKKNAIIENLQAGLKK ITPLKITDSNIRVIDGAWEGIYSWIAVNYILGKFEKENEPRVGMIDMGGASVQIAFEI PKEDVYNGGNVYEINLGRDHNSDYKYSIYSTTFLGYGANEGLKRYENSLLESHQVVDS CSPKGLNKLIGENAVNGTGEWDTCLAQMSTLIGEKTLPTCATQPSCFLRNVIGPSVNL SKVPLYGFSEYWYTTSNFNSGGEYHYEKFTDEVRKYCQKNWTDIQEGFKRNEFPNAEF SRLGTNCFKAAWVTTVLHEGFNVDKTNHLFQSVLKIAGEEMQWALGAMLYHTRDLKFG LGLEEELEVIQSTQQISNFFSFCVILVFVLAAVLYRQLQSDSLYKKYHYLRTDSKPDF LNV" CDS join(286345..286374,286422..286543,286595..286706) /gene="CBG17676" /locus_tag="CBG_17676" /standard_name="CBG17676" /product="Protein CBG17676" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRJ5" /protein_id="CAP35269.1" /translation="MAAPPPPYNQAYNPYPPPPLGSVYTVQPGVPIGQGAQPAYAVYY QQPQTVIVDDCHHHHRERHGGGGGGEMCCLAGLMACLCFMCLK" CDS join(287197..287381,287427..287543,287620..287839) /gene="Cbr-rsp-6" /locus_tag="CBG_17675" /standard_name="CBG17675" /product="Protein CBR-RSP-6" /note="C. briggsae CBR-RSP-6 protein; contains similarity to Pfam domain PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) contains similarity to Interpro domain IPR000504 (RNA recognition motif domain)" /note="Predicted" /db_xref="GOA:A8XRJ6" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR035979" /db_xref="UniProtKB/TrEMBL:A8XRJ6" /protein_id="CAP35270.2" /translation="MDAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFV EYDDVRDAEDAVRALDGSRICGVRARVELSTGQRRGGGGRGGGYGGGYGGRGGGRDSS IRGPYFKILADSARPRPHLPSQTSLSSTPLHLLSSRHLLLLFHTTLRPFLLPKQSPEN CICRVSSAKLPPQ" CDS join(288979..289086,289141..289299,289523..290053, 290099..290181,291271..291611,291661..291880, 291930..292038) /gene="Cbr-imp-3" /locus_tag="CBG_17674" /standard_name="CBG17674" /product="Protein CBR-IMP-3" /note="C. briggsae CBR-IMP-3 protein; contains similarity to Pfam domain PF04258 Signal peptide peptidase contains similarity to Interpro domain IPR007369 (Peptidase A22B, signal peptide peptidase)" /note="Predicted" /db_xref="GOA:A8XRJ7" /db_xref="InterPro:IPR007369" /db_xref="UniProtKB/TrEMBL:A8XRJ7" /protein_id="CAP35271.1" /translation="MRDDVAKIAASTSILILSWIVLYHSCRRASTVYFFELDSTTVIF MDKVPAMILPFVFSIVLYFVYLGTKRSADIEKDREVAREAEKELKASSSLNSRKVSRE ISRRASVSLGDEQAEQQQRIRRLLSDIEEADIENTVRSHRKRMEEEEDIAPKLLEEDE ETDTPPPRKLTSRFIVEAAEDGSKIIIPLESMSVTPEVRSRTNSKSTHDMLGTHRGSS SNWISASQRSSRKSSMNGSPDKNQLVWTCGDEGSSTAEKCDIYKKLGDVDLFSYSLSA LSLLPRSDDGPRVYIQLDLLDIIAELFAVHVPIWASVACIHIILLESFSQHMSFYFYY HEESMMYASLLVSLSFGLYHECAGNWISNDILAFASIYVVCSRIQAVSYETAVIFVVG MSLFDLFFFYVIDLLSTVTKENRAPLMILVPRDTKGNKQSLAALDVMVPGIFLNVVLK YSSMYDTNLFAITFSAVFASLVITVFFSIWRSKTTPAMVLPAISAIIFSIGFANHLED LWKFMIKH" assembly_gap 291040..291095 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(293722..293878,293927..294072,294118..294324, 294374..294618,294666..294790,294833..294903, 294951..295052) /gene="Cbr-tag-322" /locus_tag="CBG_17673" /standard_name="CBG17673" /product="Protein CBR-TAG-322" /note="C. briggsae CBR-TAG-322 protein; contains similarity to Pfam domain PF10239 Protein of unknown function (DUF2465) contains similarity to Interpro domain IPR018797 (Uncharacterised protein family FAM98)" /note="Predicted" /db_xref="GOA:A8XRJ8" /db_xref="InterPro:IPR018797" /db_xref="UniProtKB/TrEMBL:A8XRJ8" /protein_id="CAP35272.2" /translation="MSDGVTIEFATRITAQCAEIRDLYEIEEYVRQPNEQNIIEFLYD LSAFLLELECPHEELTCGDITTRFCSQSSRDLLSSFLASEVKTARLVTLRKIESGEIV SEKRDLELTPVIDAAFRTLDIPKHTGSVNEWKLMETLRQKTESRVTQSQRNPLFKATL DDKTLPDIEKQCEFFSRDFYNRLLLLNSRLKVTVESFLWNDRLKIHRENIQSILSTRV EEIGKLKANSDIAHLLSASSSLLYIQKASDVSRRNRTKTKQHPLSSGEAPKDRGGRTD EMVGVKQESFKQQQHNYNRQNSHQQNRSKGTFERPKTHEEQVLEQHTSHHGQSWRGGH RGGRGRGGGRGGRGSY" CDS join(295324..295863,295916..296059) /gene="Cbr-tag-321" /locus_tag="CBG_17672" /standard_name="CBG17672" /product="Protein CBR-TAG-321" /note="C. briggsae CBR-TAG-321 protein; contains similarity to Pfam domain PF10507 Protein of unknown function (DUF2453) contains similarity to Interpro domain IPR019537 (Transmembrane protein 65)" /note="Predicted" /db_xref="GOA:A8XRJ9" /db_xref="InterPro:IPR019537" /db_xref="UniProtKB/TrEMBL:A8XRJ9" /protein_id="CAP35273.1" /translation="MISPPIRLASATIGRASFRMFLSASGTQCQWNCRWSTTAAFKHL DKLIIETPDDAMEIASRLSATEQLMLKTAIDDCLTRKEKEKVEELTKEQVKGIFLVNS IPFIGFGLLDNMIMILAGEYIDQKLGAVLAISTMAAAALGNLISDIAGVGLAHYVEVA VQRVGIKHPVLTAAQVDSGRARFTTNAARAAGLTIGCLLGMFPLLFFNDDDGEDKKKN KETKIVAVE" assembly_gap 296380..296949 /estimated_length=570 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS join(297175..297363,297380..298510,298708..298940, 298992..299580) /gene="Cbr-sec-10" /locus_tag="CBG_17671" /standard_name="CBG17671" /product="Protein CBR-SEC-10" /note="C. briggsae CBR-SEC-10 protein; contains similarity to Pfam domain PF07393 Exocyst complex component Sec10 contains similarity to Interpro domain IPR009976 (Exocyst complex component Sec10)" /note="Predicted" /db_xref="GOA:A8XRK0" /db_xref="InterPro:IPR009976" /db_xref="InterPro:IPR033960" /db_xref="UniProtKB/TrEMBL:A8XRK0" /protein_id="CAP35274.2" /translation="MSGGQYVTYVQDLEQEPFDAIDLVEKLAWRMTGSAQTINDPVSL KTRFEEEIGSLQMLCDQFQGHLKKLSFQSKIDTLEKQMNEEKKEYVQKLQRLHEKNTE AIDKMKQLDHTMQSVSTKVVHLGDQLESVDQPRSRAHDAHQLMQHFDEFLSDQPLNSM IFTDPDKLLESADLVHKLYSISQELNKDKFSTVQARIAQRYKVVEDLLIEEFIRSQRD EKKMAEVAKILSEFKGYSGCVDRYVEFLCQSIHPRGDGGEILADCLQLCRTQQPRIAA IFPSPHTVMQKLVLNLFTGRMKETINARLRECKETEDHEHYLRDLASLYSSTLKMCKE LEKLHISPDSAFLSTLTDSIFQRYINTYCTEELRYLNDQCSNLLQRFYESKKHIKKQV GGGLHELKRDVAARLMTVETYGGETFVAEDVAISILQETKNAFGRAVQLCDTEDLPRH VENIVDCLLKYLYGDHLDYAVETGLSGISLAESKTEPPAYFFSIVAKCTSVILLMMKQ FEDPIFPIIKDTIAEPSVSKKWQQSLRSLENKMSLGLERQLNSIVGYVKFLFSEQKKT DFRPDSQQIDIRVSPQCQIASRFLASQVAAMELGCDGENLEALQSDLANRLFIFMLSH IKQFTYNSTGAVLLLCDVGELRSLISKWRVQQALAQWESLQALTNLLAVLPDQVNETA HSSSLENVDRQLIHDFVRLRTDFRSIKNFQI" CDS join(299846..300469,300517..300786) /gene="CBG26455" /locus_tag="CBG_26455" /standard_name="CBG26455" /product="Protein CBG26455" /note="Predicted" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR019734" /db_xref="InterPro:IPR025986" /db_xref="UniProtKB/TrEMBL:B6IKP2" /protein_id="CAS00472.1" /translation="MSSEDRDLAKRFKEEGNEAFKQKKYHKAITLYTKSLNYYADSVV FSNRAQAELNANLPVLAQIDCTAAIEKDPAAAKAYYRRAQAFKAMELYELARKDMESC CKFDQSMNKHAYELKGKKNIPVIELSAIERDEFLQSADALKKIKIAFDKETTEVASQP EVKSKKENPKDKYLTKLPPPPKDYQDFVAAVSLLSRAQSLLPLAEYFLSIETAKYRDL FDVLLDDVYASHIFNALNFQLKTSLPIPKLAERMLKLADLSRFDLILALMPASQKVSI TEICNHLEPDEALQVMAKYHI" CDS complement(join(301678..301926,301976..302266, 302312..302560,302606..302731,302776..302841)) /gene="Cbr-swd-2.1" /locus_tag="CBG_17670" /standard_name="CBG17670" /product="Protein CBR-SWD-2.1" /note="C. briggsae CBR-SWD-2.1 protein; contains similarity to Pfam domain PF00400 WD domain, G-beta repeat contains similarity to Interpro domain IPR001680 (WD40 repeat)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XRK1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR024977" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:A8XRK1" /protein_id="CAP35275.1" /translation="MNNGTEMCPMELAAYQALRPAKRFTDSRNVLLDLAHSGDGSSLM VSATDVILFYDLKDGSKEKPIECKKYGVDLLEYTTDDTCAHSDTKGGLIRLLNITKNT YIRYLPGHTKRICGIKSNPQQREKFISSSEDGDVRMFDSRTYDNYGLLHSGHPALIAF DPDGIIFATATKSETIRLFDVRSFDLGPFSVFRIMKNDDDEWTNIEFTPCGKFILVST KGAGVKWIDAYTGKLVHNFCDHKNPRNVSLRATVTPDSDYVMVGSADRSIYIYNTESG NVAGKLYTPYPEPSHILDFNPKLFLMTSLRREVLIWTPDSDYLFGRLPER" CDS complement(join(303031..303084,303135..303390, 303438..303770,303818..303884,303929..304136, 304185..304241)) /gene="Cbr-swd-2.2" /locus_tag="CBG_17669" /standard_name="CBG17669" /product="Protein CBR-SWD-2.2" /note="C. briggsae CBR-SWD-2.2 protein; contains similarity to Pfam domain PF00400 WD domain, G-beta repeat contains similarity to Interpro domain IPR001680 (WD40 repeat)" /note="Predicted" /db_xref="GOA:A8XRK2" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR036322" /db_xref="InterPro:IPR037867" /db_xref="UniProtKB/TrEMBL:A8XRK2" /protein_id="CAP35276.1" /translation="MTSVEVEITGNLQKLAPTKPDSMAIVNSLTFSSNGEQVIMSTDD DSMYLYDMRAGTRSRNINSKKYGCSHVKFASDAMCALHGSTKVDNTIRYLSLTDNKYL RYFQGHDKMVTGINVSPSDEMFLSVAEDKTIRLWDLKTYNCIGLMNLSSTPIATFDPE GLLFAAGLDNNLIKLYDLRSFDKGPFSSFGPLDNTDTYEWTSMRFSPCGKYILICTNS NVLFIIDAFSGAIKHVLQDHQNTKQIPLTASFTPDATHVMVGSSDGLIYFYDVESGMV AHRIPAPNNQTCHITEFSPVHFAAATADTKLTLWCANDELKAFASQPQ" CDS join(304473..304520,304565..304641,304690..304790, 304836..306472,306519..306824,307097..307243) /gene="Cbr-hcf-1" /locus_tag="CBG_17668" /standard_name="CBG17668" /product="Protein CBR-HCF-1" /note="C. briggsae CBR-HCF-1 protein; contains similarity to Pfam domains PF01344 (Kelch motif) (2), PF07646 (Kelch motif) (2)contains similarity to Interpro domains IPR003961 (Fibronectin, type III), IPR006652 (Kelch repeat type 1), IPR011498 (Kelch repeat type 2)" /note="Predicted" /db_xref="GOA:A8XRK3" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR006652" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR015915" /db_xref="InterPro:IPR036116" /db_xref="UniProtKB/TrEMBL:A8XRK3" /protein_id="CAP35277.2" /translation="MDEEQPLEMETFDQKNESLPEESLRKIVRWRPVQNVGGSMPRAR HGHRAVSVKDLIIIFGGGNEGMIDELHVFNPQKREWYVPQIRGQSPSPAAAFGATALG TKIYTFGGMIEYGKYTSEVYELQATRWEWRRMPTKTTGSDLAPAARLGHSFVASQKTQ KAYMFGGLTNELNDNKRNLPRYMNDLYTLDLSAAPNAVIWEKPETFGEPPSVRESHTA VIYETDTVNRMIIYGGMNGVRLGDLWYLDLDTMHWTEIKLDDPRCGISPEPRSLHTSV LIDDKMFVYGGWVPLMSSGPGNEQEREWKCTSSVACWDITKNQWIPLQHYCSDPETMP RGRAGHCAAAMGDRMFIWSGRDGYRKAWSNQVCCRDMWELETKKPEQPGKIALARAGF NLLEVSWPPVQGATAYFLQTGFVDTKDGPASEKRVPPSPRKQPSAAAVPQKEDDKNAP AAPSLISTQGTTYTAPAPPNTTANEGELPQDLFDDTEKNERTSASPRPSGDAQAGLST KKPDEGAGQSDEGTEKEEETSSHENEDDDLAWFDIGVIKDPAVNVTHYFHARQAPLED QIRELIDKNGFKCVNDPCFTADDKVPLINGHTYRFRVCAVNGLGKGAWSETQSFKTCT PGYPSAPSSIRITKSPDGAQLTWEPPANTHVSGKILEYSVYLAVKNQSANPADSQLAF MRVYCGPLAECNVHQPSLQSAYVDHTNKPAIIFRIAAKNEKGYGPATQVRWLQDQQKM MPVRSAYPNMNPGYVYQNQAPQQKRIRYDHH" CDS join(307706..307984,308867..308953,309125..309346) /gene="CBG17667" /locus_tag="CBG_17667" /standard_name="CBG17667" /product="Protein CBG17667" /note="Predicted" /db_xref="InterPro:IPR028092" /db_xref="UniProtKB/TrEMBL:A8XRK4" /protein_id="CAP35278.1" /translation="MLRWLFQSDQVAKSFDSPSETQSARDDRKSIGDFADNILLFDLV IGEIELAVVRFELEKEQKEEEERKAERRPDYSWLVTGGARRHRKQLSLQEKNRIENAC ERLKPCEWSKTIDTWKTRTQSPTSRDQIIEEFVLATHGTIQARKHEPTISEVLKNFAT GKAGNLHTVRHGELPRQDSNRSLAELSFIELQEMV" CDS complement(join(310691..310765,310810..310896, 311250..311912,311956..312041,312089..312446, 312660..312886,312941..312995)) /gene="CBG17666" /locus_tag="CBG_17666" /standard_name="CBG17666" /product="Protein CBG17666" /note="contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)" /note="Predicted" /db_xref="GOA:A8XRK5" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR029021" /db_xref="UniProtKB/TrEMBL:A8XRK5" /protein_id="CAP35279.1" /translation="MDVKAVDQKHKRVKSNKHKRKKRAPSKVGKQHKSKGTHHKKGRK PSKSRSKSKKKSGFLCCRKKQKKRRKSKSKTTKKQPKSKPIKQLAPVPNEHLGGVVLV KNGKTPTGGTPAAQTPITPQKQEKASSEPLTPEKDGVKAPKTPQSGEEVKLSKKKIGS DKDGDKEEKVENNKMGENEKDDEAHSDAKEEVEKAGEKRKKKNTENMNLDKLLDEVDK AENKISILKPFAEKVVSPDSTVAANHFSQVSCYIPPHVTKRHFVANMSKNRFADVICL DHSRVKLADSSYIHANWFDVNSQKRTILTQFPLPHTASDFWQMVIEQKVKCVLLIMTD QEYKHFGGNLIFSQNQDFLSFEDRSIRVGEFKEIELGKGWVLKVISVTNGSYKSFVHI HHYKNWLHDSAPSDSKQIWQVQSYLQKYTDPHVYMSLSGCGRAGTWALFETVNAGLHC EQPTFNMIKSLENLRHGRLHSVQNLAQFSFVYTMIADKILGKAPPTESSKDQESSTVA ALRQLTIQ" CDS join(313117..313266,313316..313515,313562..313898, 316390..316525,316576..316645,317009..317129) /gene="CBG17664" /locus_tag="CBG_17664" /standard_name="CBG17664" /product="Protein CBG17664" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRK6" /protein_id="CAP35280.1" /translation="MLPLPWWILGVGPDEADDEQLIEPEKTPENPEIPEPSTPSSLVF RTPSASPEFLAEAQDHLPKVVDMNTFMNVAKKRSSSRMDDWVSPKVRKTNEKKSFVRN ETEIMNKTLDEEPDGIPLNSEDSSRSGSPMPFNNDVFNDTFFLDDNNNQMAQNETVVE SPSRERDFPLFFTSFDDTTVLFNTTITGDIDLSQKNDAVGDWVFKNNQFLQSPDLKTD GAGDAVFKQPKQGNGSGEEGNKEKETKKEKEKKKELEKKKHDDDDELEQDVEKDVQCQ EIRSWPENSKNEVATEKSQKFNPFDTNESSIVEQKTNSIEKGEDVQKPQRVILSYCAI PSN" CDS complement(join(314176..314189,314237..314412, 314457..314809,314854..315433,315480..315597, 315646..315739,315769..316030,316077..316117)) /gene="CBG17665" /locus_tag="CBG_17665" /standard_name="CBG17665" /product="Protein CBG17665" /note="contains similarity to Pfam domain PF00858 Amiloride-sensitive sodium channel contains similarity to Interpro domain IPR001873 (Na+ channel, amiloride-sensitive)" /note="Predicted" /db_xref="GOA:A8XRK7" /db_xref="InterPro:IPR001873" /db_xref="UniProtKB/TrEMBL:A8XRK7" /protein_id="CAP35281.2" /translation="MYSMKPPPENEIFISPITLASINTTNYEPAMKIARFHCNCKYLW LRELHGLSAFMMSNSLMEKIFWSIVITACAAYSIVNTTNILKEYGAEATTTLLTILPL DSIQAKQLKFPTMVFCPRNPDFINYYNVLEDMYNHLGYMENVTNFHILQYAMTGFGFD NANGDTFNETYKEKIRSYYLKWRDNRTQYEMFDFMYNKNGYTCMDLFQTCYGGSLTYN CCDIFQPTYAMLRGRCFRLVDDYYQNDTDEVSKVSIFFNNMTSPILNSGVLVKIATPG LFIIVRFQPQLVLYNGDSNVEVGIYPRYYLNSNDWNRVRYYQKSMILLPKSDGCSTDP IYQGKFTCFVYKWLMQLIDQYNCTVPYYKYTLPYLKDVPICEPDVIVDNFANISLTPS TIGYKCTPACSRIENTVQLTTSIDYDPDPSYMFRIEASFTYLEYEQYKEIRTTSTAGF ISELGGQAGLFVGSSIMSFVQLFNSIFIQLYKLLRNYCNKKGIRVRLGLYKTHPTEPA DKYYERDAALSDEPPYPLATIIEEEEQNIMDADELEL" CDS join(317329..317937,317984..318099,318146..318248, 318291..318380,318428..318618,318662..318800) /gene="CBG17663" /locus_tag="CBG_17663" /standard_name="CBG17663" /product="Protein CBG17663" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRK8" /protein_id="CAP35282.1" /translation="MGDLLYLMSDEDVALTAALAFTLEFFESEKPALNTSLEKKPIPY FSYEDRDTYHEDYRPQCEQIDIDYYPTIFNYEKECGVLEESEVATNSEYSNPRKSPPQ RRGRPALASKEPPLKKSKTREPPKPTRASSRVQILQLARQEAEKNKPHRQPLPRNAKK TNKPKPKKTKKPTVETYYMRKKREKENLVNARIAKQQRKTIAEATKSLVRAFGQVASV QTKTGRQHLSAWQKWLCTSTKFVKDLSTNPRRAHNTSEFHIFLVNSVTVMQNTMCSFR PRPPETHNLMMRFVADFTKIWNIAFTFGTTTNAGDVTKLLEYVIGHFIAYPKRMNATN LSWIQTKLILDQLLSLITRVEIVYDTMFLLSKIQHNLLRKWAHQSHEALDFKSYALSQ LHSFSMILNSRLLHLSNQHRYFL" CDS 319119..319244 /gene="CBG26456" /locus_tag="CBG_26456" /standard_name="CBG26456" /product="Protein CBG26456" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IKP3" /protein_id="CAS00473.1" /translation="MKKRFWSILFLFTTCSASPFPCGPSFVPCTQKRAFSSLIRE" CDS join(320206..320305,320350..320401,320508..320621, 322157..322251,322302..322478,322809..322869, 323016..323115,324582..324624,325685..325795, 325846..326134,326180..326344,327499..327589, 327634..327759,327807..327936,327986..328122, 328167..328489,328539..329865,329927..330423, 330465..330834,330861..331190) /gene="CBG17660" /locus_tag="CBG_17660" /standard_name="CBG17660" /product="Protein CBG17660" /note="contains similarity to Pfam domain PF03098 Animal haem peroxidase contains similarity to Interpro domains IPR019791 (Haem peroxidase, animal, subgroup), IPR002007 (Haem peroxidase, animal)" /note="Predicted" /db_xref="GOA:A8XRK9" /db_xref="InterPro:IPR010255" /db_xref="InterPro:IPR019791" /db_xref="InterPro:IPR037120" /db_xref="UniProtKB/TrEMBL:A8XRK9" /protein_id="CAP35283.2" /translation="MKQEVITSAASRAVHLTEQLFNDTEKLMSDKFDDTYKQSEIAWM HYTYADHQSPKSLKSMVQFLPTENTKMKEICPVNQIEECVIGKYRSYTGHCNNVKNPL NGASYERLKRFLPADYADGISTPRSSKSGQPLPSSRALSALFTPSPSGHATCSLLIAP FLSFIYDDIVHVPSNRIFKRSWLSWWSWTSWLSWGSWDSSVDLVLVGLVVLVVRSLLE FHRLHRLHRVLHLQLTNRRNGRMLSGFGFGDFYGNEKAMPLPCCRGNNSHPECFEIPV PDDDSLQSKNVKCLPYSRSLLVPNPKCSFGQRQQANMATSYLDLSQIYGNTNGFVNRM RLFKDGKLALRAVGGFNNQMGVPPANLDNSICRSSTGKPCLLAGNNRINFLPTSGAMY TIWMRQHNLIAEKLSLVNPHWDDQKLFEEGRRITIAQFQHVTFNEMVPVLVGKEQLRV MGIKLQNSGYDSGYDINIDASASNVFAAAAGQFFLTLLPSKFSIEDRKFASRSESLLK HFNDPALIYEKGKIDGMLKFLLNAPIEKPGLHSSPLLRTAFQKKDEADSVDIIAMVIQ MGRDHGLPSYLQWRQFCKLEDVNSFLALQSIFKPSVNISDFERLYESPEDVDVFVGGL SEQPAKGSLLGPTFACLFAHQMAQTKRGDRLWYENFVSPSAFTAPQIDEIRKTTMARV VCDNTDTVTHVQHHAFSLPDDYGNCPLSCNSTGIIQPFDAKPFKDDEKLATLPITKET IEKAIRLGLKQWQRYEEGEGRRISAQLSDSSPSALVSHALLMAPKKESIDIARTASVL REATNILVTGNGLNKDEKLPDLDVETLQKILPQIDIGSVIGNFTPFLGQFRLRETNLP LILFSARDPLPKEQCLPEPLPCDHTSKYRSYSGWCNNLKNPKFGNAFTQMRRLLDPAY DDGFDTPRTRSVLGSELPSARKISNIVHSDAPKFHVKFTHMLMQFGQILDHDMMHSPI SRGPKNTILNCSSCDSAQTLSIHCFPIKIEPDDPFFPARHSDGRPRCMPFARSLLAQV SLGYRNQLNQLTSFLDASTIYGSTQCEANKLRLFSDGKLNFTDLGFNKEALPQGNQER DCRSILQNRQRRCFVAGDERSNEQPGLTAIHNIFLREHNRIARYLKQINNFWSDEKLF QEARRINIAQLQNIVYKEWLPVVLGCQNVEKWGLMPQSSGYFEGYDDQCDATISQEMS TSAFRFGHSLIRGVFTRMNDNFQNMTNHVNLTETFSNPSPVYDKNSGHMESILMGLIG ASSMAFDRHIVTAVRNHLFAKPGGPLTGLDLPAVNIQRARDHGVQGYNAYRKYCGLRK ASTFSDLRDTMTSDAVTALETAYAHVDDIDLFPGIMSESPTRGSLVGPTLACLIGEQM QRLKKCDRFYYETNDAMVRFTPDQLVEIRKASLSRIICDNSEYAANIQPNVFLMPDDL FVNLRVDSINIIMQLDIFRNSPMSCSELPEMDLNKWVDRDYCLVDERVVNRGKTKRIT PCVTCTCTLEGPECHSITINDCSRLFRDFSLADVQKDPVCLIQCSQQLKKL" CDS complement(join(322556..323264,323309..323580)) /gene="Cbr-col-14" /locus_tag="CBG_17662" /standard_name="CBG17662" /product="Protein CBR-COL-14" /note="C. briggsae CBR-COL-14 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain) , PF01391 (Collagen triple helix repeat (20 copies)) (2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XRL0" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/TrEMBL:A8XRL0" /protein_id="CAP35284.1" /translation="MSDEKEKRSLRPVAFVAVVFSTVAITSCLITFPLILHYIQTLES QVQLDLEFCQARARDMWKEMLDIETGGKKDSAKLANIVLNHRRLEKRDTLQDFWARRL HDQELRDQPVGYDNPSVGVESFNSEGGGCCTCHRGPPGPAGDGGRDGADGVDGTPGEI GPPGPPAPPGPDPHSLFPPQCPCEAPPGDAGPPGQPGPDGPPGAPGNPGEDGKPGDQG PRGPPGIPGAPGQPGRPGPPGEPGTYKTEVGPAGRAGAPGRPGPPGQPGPAGPPGENG KPGGQGPSGLPGPPGQPGQNGAPGEVGQPGDNGAPGSCDHCPPARLAPGY" CDS join(331462..331549,332431..332696,332750..333003, 333064..333208,333255..333396,335746..336132, 336328..336530) /gene="Cbr-klo-2" /locus_tag="CBG_17658" /standard_name="CBG17658" /product="Protein CBR-KLO-2" /note="C. briggsae CBR-KLO-2 protein; contains similarity to Pfam domain PF00232 Glycosyl hydrolase family 1 contains similarity to Interpro domain IPR001360 (Glycoside hydrolase, family 1)" /note="Predicted" /db_xref="GOA:A8XRL1" /db_xref="InterPro:IPR001360" /db_xref="InterPro:IPR017853" /db_xref="UniProtKB/TrEMBL:A8XRL1" /protein_id="CAP35285.1" /translation="MSLPTRFPKNFQLATATAAYQIEGAKELDGRGFSTWDAIRSEYG RIRDASDPNLSCESRLKYKEDIALLAKIGVTSYRFSISWSRVLPNGTLSEISEEGVQY YRDVCLLLRDNGIEPIVTLFHFDMPLAIYDNGTSWLNKENCDHFVNFADLCFQKFGDL VKTWITYNEINMQAWSSVVKLTGEQWLCPDRPEIENHNQSPYIALKNMLLAHAKIYRN YEKNYKKIQNGVVGITNGGHFCFPASHSPEDQAASERALDWFFKSTIDPILSESGDFP VSMRENLSFLPNFTDDEKAILKGSTDFLGINYYLSHVVRGVSDNETPPSQSERDGSYA FVEGKWEKSLVTVQTSIKNRNFRICGDTWIRYAPDGLLALLEYVKEKYNNIPVFITEN GCPDIVGEEKKPVEEILNDTHRIKYITGHLEVVAKAIDEGCNVIGYTLWTLMDNFEWD DGFELRFGICRVDFESPEKTRTMKQSAKFYQNFIREFKKHHNLL" tRNA 332137..332208 /gene="CBG28885" /locus_tag="CBG_28885" /standard_name="CBG28885" /product="RNA transcript CBG28885" /note="C. briggsae predicted tRNA" tRNA complement(336157..336228) /gene="CBG28684" /locus_tag="CBG_28684" /standard_name="CBG28684" /product="RNA transcript CBG28684" /note="C. briggsae predicted tRNA" CDS complement(join(336835..337006,337056..337183, 337230..337382,337432..337614,337660..337889, 338801..339092)) /gene="CBG17657" /locus_tag="CBG_17657" /standard_name="CBG17657" /product="Protein CBG17657" /note="contains similarity to Pfam domains PF00001 (7 transmembrane receptor (rhodopsin family)) , PF10320 (Serpentine type 7TM GPCR chemoreceptor Srsx) contains similarity to Interpro domains IPR019424 (7TM GPCR, serpentine receptor class sx (Srsx)), IPR000276 (GPCR, rhodopsin-like, 7TM)" /note="Predicted" /db_xref="GOA:A8XRL2" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/TrEMBL:A8XRL2" /protein_id="CAP35286.2" /translation="MNSSSFVSSTEPTVLFEEEFDGVPLLRHSYQLTVLYTVAYGAVF FTGVLGNTFVVLAVWAHKNLNITTDYLILSLALADLFILWICLPTTLINSIFTEWLWG QFFCRLSTWANASTSFASVYTLVAVTADRYLAICHTLKYNTSWDREYTKYVIFTVWFV AAIFGIPNWYNYDLIVWQEGNYGYRLCTSQTDQKLYFLFVNLLLAFIVPFGLISGLYT KIFITVSTHRSLAVDARAREDRVKLRVATMMLTVIIVFACCWLPLYCIFTYFFFFADQ RSEVFRITSMLIRPIFQWMSLLSSSLNPIIYIAYSHKYRRAFKSILLMPCKTRYERVR STILRRHSRGGKSTATISMSNFGAEPTNLCGASSLLIEPDGKQVERSVSDC" CDS complement(345471..346151) /gene="CBG17656" /locus_tag="CBG_17656" /standard_name="CBG17656" /product="Protein CBG17656" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRL3" /protein_id="CAP35287.1" /translation="MCCKVFGVLVLALAAYAIPPSGPPPSGEPPVPFDPSGAPPSGPP PSGEPPGPFDPSDAPPKPSGPPPHPHFSRRPRPTRLPRPSRPPPSEEPSDSVLNFIFG KPKPSGPPHLPPSGAPPSGEPPAPFHPSGAPPSGPPPSGEPPGPFEPSGPPPSAAPSF FQWIFGKPKPSRPPHPPPSGAPPKPSGEPPLPPSGAPPSGPPPRPPRPSGSPPSDGPE GSGSPPPF" CDS join(347706..347839,347886..348030,348076..348329, 348378..348855) /gene="CBG17655" /locus_tag="CBG_17655" /standard_name="CBG17655" /product="Protein CBG17655" /note="contains similarity to Pfam domain PF00153 Mitochondrial carrier protein contains similarity to Interpro domain IPR018108 (Mitochondrial substrate/solute carrier)" /note="Predicted" /db_xref="GOA:A8XRL4" /db_xref="InterPro:IPR018108" /db_xref="InterPro:IPR023395" /db_xref="UniProtKB/TrEMBL:A8XRL4" /protein_id="CAP35288.2" /translation="MAQMLPPAPRDSYAVPGKPGNSDPLTVVGWEHMDLKLFYPSALL STWSIRTALYPLAVLRSQLQLQKQNTVYRSTLHAYSDISRREGFRGLYRGFWITVPQI GCSFIYSTIFEKCRSVLHEQGVKSVGGAAAVAGGLASFATQSIFVPTDIIAQYMMIYK NTDKLTAGHDKAVIERVATHVKNGNGLGTSVIKAIYQADGALGFYRGFWASAAVYIPQ MLTFWPSYYWMLGLFSKLNPNTDRSLLIDQAIAATIGGSISTIATNPMELFRVRLQVH RSSYAKTLETMLRDEKTAIFTKGLTPRIIANSIYGGMVVVGYEIVKRLCAKEEYKHRI KW" CDS complement(join(349100..349358,349407..349741, 349805..350239,350288..350402,350513..350535)) /gene="CBG17654" /locus_tag="CBG_17654" /standard_name="CBG17654" /product="Protein CBG17654" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRL5" /protein_id="CAP35289.2" /translation="MSKPKSTLRTTRQTSKGALFTICEYSGVSVAYSNNARTSLKRTR IDYSPEPRPVKQKPARRNSNGAAKQPARKPATRVPSVRTSPSVYQNSQKPKPGLVNSS EPKANRIHDNNVPPPVFFTPPSLFDDSVTDVDMDGFNIAADFDEAVFDALDDELDKEE TEEDLETAMVIRGMYSTEESHPVLVFGKIAIEYDNFDFTRVIEEITSLTCFNKKHEDS LIPLLKLVDRDVTKKLNTVTIKNFYKNEIIPAFENMKLFRNDPKRFLDKNKGQFERYV DGDCIVEVPLPPWPQIFPYQMRNIFKAELAEKLERESEQRFQEEDKLRAEIERLRQQR ERRDMEQQFARNQQMFHAFMVSETNNNFHNPFNAMFNLQPMYPPNYYGHMPHYP" CDS join(351212..351323,351369..352403,352726..352946) /gene="CBG17653" /locus_tag="CBG_17653" /standard_name="CBG17653" /product="Protein CBG17653" /note="contains similarity to Pfam domain PF12656 DExH-box splicing factor binding site contains similarity to Interpro domains IPR005824 (KOW), IPR000467 (D111/G-patch)" /note="Predicted" /db_xref="GOA:A8XRL6" /db_xref="InterPro:IPR000467" /db_xref="InterPro:IPR005824" /db_xref="InterPro:IPR026822" /db_xref="UniProtKB/TrEMBL:A8XRL6" /protein_id="CAP35290.1" /translation="MVEQTTSVTGSLPKISFGVKKREDTKFQAPAPVAVINVDVDSDE EREKEEMERAAKRRKMTHFEDGDIRGDVDNVKEAAVIPMVIEHDWRTQKLLEKEKAGT LTEEEKAKLALVLPNGVNGEDGTEGSGEKIVVEEGQGANEDADYSAISIESFGLAILR GCNWKDGDGIGKNPQKVALKLPNRRPPGLGLGATPKHPAGGDKKKSAADKGEKEEKIE EIKVGSFIKVVDGRNKGIYGKVEGRDDDSNSFFIRTAIGGKSIKVSQIVVMAVSAKEY ERDSKCLNKNEYDKEKDRIEKERKKYEQPSTSSSKDYKSSSSSKSSKYDYDDNRKNEK LWARTDLLVRFIDEDFKRGSLFKQKVRIVDVAGKDEITIEDDRGNTYYNVRQSYLETV IPRDIGEKLMIVAGKRSGKLAVMLDKDKYKEKVTVRLLTTNEVVTSYFEDVCAVKIRH EEDYE" CDS complement(join(353076..353294,353337..353706, 353748..353836,353966..354102,354151..354478, 354532..354626,355398..355443)) /gene="CBG17652" /locus_tag="CBG_17652" /standard_name="CBG17652" /product="Protein CBG17652" /note="contains similarity to Pfam domains PF01041 (DegT/DnrJ/EryC1/StrS aminotransferase family) , PF01212 (Beta-eliminating lyase) contains similarity to Interpro domains IPR000653 (DegT/DnrJ/EryC1/StrS aminotransferase), IPR001597 (Aromatic amino acid beta-eliminating lyase/threonine aldolase)" /note="Predicted" /db_xref="GOA:A8XRL7" /db_xref="InterPro:IPR001597" /db_xref="InterPro:IPR015421" /db_xref="InterPro:IPR015422" /db_xref="InterPro:IPR015424" /db_xref="InterPro:IPR023603" /db_xref="UniProtKB/TrEMBL:A8XRL7" /protein_id="CAP35291.1" /translation="MHSQFTRRVLVLAKNASFRNFATARMTQTTNGINENGHSASTDL LDTPSAYTQKSNKTHTSIDLRSDTVTVPSLEMRQAMAEAIVGDDVYGEDTTTVRLEQR CAELFGKEAGLFVASGTMGNLLAIMAHCQRGEEIIVGRYNHIHRWEQGNYAQLAGISA TTLEVKPDGTMDLDDIEQAIRVQGGYIQIYDESSDTEVTSIPDCHMPASKLICIENTH NYTGGKALPIDWMRSVKMLAERRSLKVHMDGARIYNAAVSCNTTVKHIASFADTVQMC FSKGLGAPVGSILVGPKAFIDKARHSRKALGGGWRQSGVLAAAAHVALDHAEATIKAD HERAKKLSKMINEATPEALRTKVYAKENDITNMVLIHCENGVSVQQLTDFFQKHDILA MTFDARRIRMVLNWNVTDENLDTIVEVYKKFVAQL" CDS complement(join(355690..355794,355898..356556, 356601..356921,357042..357102)) /gene="CBG17651" /locus_tag="CBG_17651" /standard_name="CBG17651" /product="Protein CBG17651" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRL8" /protein_id="CAP35292.1" /translation="MNNALDSLPNDEFEFIESFDEDSEEHEEHDDQWSMQQSIKIEPI SILMPKTLQPERSLSPVGSKAPESIADPERTPEASLVETPLLTETLKEDNTPMSTPLA SLIDPMSTAIPTLHNMSIVSESECSNNSSLINVADVESTEVALRTSLLLVGELKAQLN AQASKMAESLQRSMSSNSDMEQMKNEFQLKMKESAMSVEKTMAEKDSAIEQLKVQLAQ SQQVADLWKQGAEKNSIASYSDSKTTVDRLLEENSRLRSQVDEEVARRMQETEHRKML TEQLKEARGGSVFDPPASLIARQLADRTDYSLRLEQELTTLRQELEESKQALKKATEE SSNKDQIVSALHEDQVESTRMLASNEQVINSLKQKCRQLGVLEDFSS" CDS join(358253..358384,358432..358483,358525..358830, 359371..359461,359513..359762,359833..360171) /gene="CBG17650" /locus_tag="CBG_17650" /standard_name="CBG17650" /product="Protein CBG17650" /note="contains similarity to Pfam domains PF00155 (Aminotransferase class I and II) , PF00266 (Aminotransferase class-V) contains similarity to Interpro domains IPR004839 (Aminotransferase, class I/classII), IPR000192 (Aminotransferase, class V/Cysteine desulfurase)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XRL9" /db_xref="InterPro:IPR004839" /db_xref="InterPro:IPR015421" /db_xref="InterPro:IPR015422" /db_xref="InterPro:IPR015424" /db_xref="UniProtKB/TrEMBL:A8XRL9" /protein_id="CAP35293.2" /translation="MRRCFSTATNYFEIHLKNELAGIKNAGTFKNERVIQGKQGVLVK VTGSDKPVINFCANNYLGSRNPWSWTLVGPFHLWNQDIHKELEQKIAKFHGTEDTILY AACFDANGGIFEVMTGEQDTIISDELNHASIIDGIRLSKAKRLRYKHLDLDDLETKLK ESKESRFRLIVTDGVFSMDGDVAPLADISSLAEQYDTLLFIDECHATGFFGKTGRGTA EAVGGNPHVINSTLGKALGGSMGGYTTGPKPLIDLLRQRSRPYLFSNSLAPSIVGSSI KVFDLLMNDSSFIGSLQTNVAHFRKSMAANGFTILGNDPTHPICPVLLGDAKLAATMA DELLKLGIYVIGFSFPVVPKGKARIRVQISAAHSKEHIDQLIDAFAKVGKKLNVV" CDS complement(join(360324..360500,361017..361151, 361635..361775,362036..362146,363959..364180)) /gene="CBG17649" /locus_tag="CBG_17649" /standard_name="CBG17649" /product="Protein CBG17649" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRM0" /protein_id="CAP35294.2" /translation="MTLRSLLLYLFFFWTTQIECVAKFEVISVSDSSLVIKMIEAANV TNFDITVQIFDLSKQRLFRRTQLDHVKNDQLLSFDGLKPDTWFAVRIEYRLNFADDIT DNALRMTKQEMVVKTKKTSRDDPKKIDQMVAFIDDLFVTKDNIYIGVGSVFKEIKKIS TVIVPELRCSKGVLSPVSQQVIQHASFHFDLSKLPKEDRKCSTICVFPYLRILTENAV TETFRAKEWCGSAEEARHLLTNKSLSINILAAFLILILAKMLF" CDS complement(join(370111..370293,370510..370863)) /gene="Cbr-grl-21" /locus_tag="CBG_17648" /standard_name="CBG17648" /product="Protein CBR-GRL-21" /note="C. briggsae CBR-GRL-21 protein; contains similarity to Pfam domain PF04155 Ground-like domain contains similarity to Interpro domain IPR007284 (Ground-like domain)" /note="Predicted" /db_xref="InterPro:IPR007284" /db_xref="UniProtKB/TrEMBL:A8XRM1" /protein_id="CAP35295.1" /translation="MVRNSVLVILSLTTATSAFLLEGLGLGLAPPRPQQCCCPPPPPP PPCGGGYEAPPPPPAYAPPPPPPPQPYSTGPSYAGSYGAAGPYKRARSKRSMELKASS GDVLCNSVQVRDIIEKGMTSDEKESRETVVALLKAEMEREYVVICSKQHFDYLASSDS DFCSVTNDAGITCSSFVF" CDS complement(join(371697..371789,371835..371937, 371985..372793,372842..372898)) /gene="Cbr-cyb-1" /locus_tag="CBG_17647" /standard_name="CBG17647" /product="Protein CBR-CYB-1" /note="C. briggsae CBR-CYB-1 protein; contains similarity to Pfam domains PF00134 (Cyclin, N-terminal domain) , PF02984 (Cyclin, C-terminal domain) contains similarity to Interpro domains IPR013763 (Cyclin-like), IPR006671 (Cyclin, N-terminal), IPR004367 (Cyclin, C-terminal), IPR014400 (Cyclin A/B/D/E)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XRM2" /db_xref="InterPro:IPR004367" /db_xref="InterPro:IPR006671" /db_xref="InterPro:IPR013763" /db_xref="InterPro:IPR036915" /db_xref="InterPro:IPR039361" /db_xref="UniProtKB/TrEMBL:A8XRM2" /protein_id="CAP35296.1" /translation="MLRAGNNTRRPSNNVENLKMAQKPMGNGPLKPVNAQGPKQHQIV AKPTTHIQQQAAGESTLKTRRINIQDNEIKCAELAPDIYKYLVYHEKQFVLAEGYMDG GEPTSKMRRILVDWLVQVHLRFHLLPETLHLTIFILDRILAKKTIAKSDLQLLGISAM FVASKFEEVFLPDIYDYEFITENTFTKKQILAMEQTILNSLQFDLSCPSSLVFARCLS RVLSEDESNPVDQQAFYYAYNISKLLGELALLDSVMSSVPKSHIAIAAMIIALNAHPV AGIDPKKAQEAVINQLEAKTEDINEAISLLAQVAFKNFKQPKLVAIKNKYQSTKLGSA STHLTDEVLDKIEAMGRQN" CDS join(373753..373896,373942..374081,374127..374347, 374397..374512,374562..374810,374984..375154, 375297..375406,375685..375730) /gene="Cbr-orc-5" /locus_tag="CBG_17646" /standard_name="CBG17646" /product="Protein CBR-ORC-5" /note="C. briggsae CBR-ORC-5 protein; contains similarity to Interpro domain IPR020796 (Origin recognition complex, subunit 5)" /note="Predicted" /db_xref="GOA:A8XRM3" /db_xref="InterPro:IPR020796" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:A8XRM3" /protein_id="CAP35297.2" /translation="MDYNEMKRLKMLLFNNSKAVSHVHVFGEDEGSRSEIVRQVLKNP EHDWICVSGDFLYADGSLKLLLESLAISLGFKTRGDKAEHFFSNIYSKVEWPDESSKK LIIFLDNAQSIVDYPPAPMQCFLDSYKAINDMTVRFVTSAPSCFTQYHINLSHLSVID FHIATPSIDTTKTLITRANPSIDSQFLNFAIQTLVIYCKSPNTLLGIISDAWKMYDNQ SSGEKFEPTLANECIGRASSEKLGIVSGEKSGERKPVETSFETMPLAMRYLLIAAFCA SNNPPQSDSRYFAKNHGRDKRSEKKELRAEEQRLAKELGPKAAELQRIVCIYETLLKL TESTSCGFDLKNVIASLDSMGLVSVTNRNNLDIPKIKCLISLETAHKISGSLNLELRN YLEYAT" CDS complement(join(379146..379260,379329..379510)) /gene="CBG17645" /locus_tag="CBG_17645" /standard_name="CBG17645" /product="Protein CBG17645" /note="contains similarity to Pfam domain PF01147 Crustacean CHH/MIH/GIH neurohormone family contains similarity to Interpro domains IPR018251 (Crustacean neurohormone, conserved site), IPR001166 (Crustacean neurohormone)" /note="Predicted" /db_xref="GOA:A8XRM4" /db_xref="InterPro:IPR018251" /db_xref="InterPro:IPR031098" /db_xref="InterPro:IPR035957" /db_xref="UniProtKB/TrEMBL:A8XRM4" /protein_id="CAP35298.2" /translation="MATTVTECRIILEDATIRPEDNLPSCPALEDEPVGEVMERICDM CHELSSHERPNMRIECRADCFTTDAFRECLKLFTPRRHTRHLRQKFEVRGLNVF" assembly_gap 385350..386140 /estimated_length=791 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(387466..387661,387814..387965, 388688..389398,389517..389708,389754..389888, 390168..390238,391743..391866,391916..392302, 392359..392777,393071..393182)) /gene="Cbr-ncx-3" /locus_tag="CBG_17641" /standard_name="CBG17641" /product="Protein CBR-NCX-3" /note="C. briggsae CBR-NCX-3 protein; contains similarity to Pfam domains PF03160 (Calx-beta domain) (2), PF01699 (Sodium/calcium exchanger protein) (2)contains similarity to Interpro domains IPR003644 (Na-Ca exchanger/integrin-beta4), IPR004837 (Sodium/calcium exchanger membrane region), IPR004836 (Sodium/calcium exchanger protein)" /note="Predicted" /db_xref="GOA:A8XRM5" /db_xref="InterPro:IPR003644" /db_xref="InterPro:IPR004836" /db_xref="InterPro:IPR004837" /db_xref="InterPro:IPR038081" /db_xref="UniProtKB/TrEMBL:A8XRM5" /protein_id="CAP35299.2" /translation="MSYSANLTCKHGILIPALETTPRNAILYLAGLFYCFLGIAIAAD IFMCSIEQITSATRKVKRQKKIGRLVSKEGEEEEEEQFEYIRIWNPTVANLTLMALGS SAPEILLSIIEIVGNGFKAGDLGPGTIVGSAAFNLFCISAICVFAVGQATKRIEMYRV FMVTAFFGTFAYIWVFLVLIVITPNVVDVWEAILTLLFFIVLVVISYAVDAEIWKKKR ATDLHEELELAQQDGGKEDDKPEKLSSEINKWASTFSLTHEDTNADVVDAVPHLDTVR RWTRTISQTYPSLSEEDQAKILAYRVNRRLSHDRLYYRIRAVRQLSSSWRKSEEEEVQ KLEKLESTDGGNKKKTLVEFSARIYRVDSTDETVSLKIVRKGNMDSKFTVNYSTVNGL AKKDLNFLFKSETLQFSPGELHKTINIQLINAANWRPNDVFYVHLKIQDEDEDTKVRL GACNVARVKMPDESGMMLGGPVVEFVKPNYIVKENAGFARSFVTRRGGKLKESLRVHY ETEDVTAKQGEDYTSVKDGIITFEGQEYEKYIDIDIIDDKMDEKDEAFIVELMKVGAG EATIGTRRKTTITIISDDNVLKNITNVHKLMGHYMRQLRPGKATWKEQILNAVSVNAG DLANATVSDCILHALAFPWKFAFAFLPPPTIFYGYPCFVVALVAIGFVTAVVGDVASI FGCMVGLKDAVTAITLVALGTSLPDTFASKIAAESDDTADNAVGNVTGSNSVNVFLGL GLPWVIASLYWASKGESFRVDAGDLGFSVTVFMICSVLFLVVLVLRRKLALFGQGELG GPFGPKTLSTLFFVGLWITYVALSIWNMYRVDHK" CDS 396059..396076 /gene="CBG26457" /locus_tag="CBG_26457" /standard_name="CBG26457" /product="Protein CBG26457" /note="Predicted" /protein_id="CAS00474.1" /translation="MYPWN" CDS join(397667..397755,398473..398718,398772..398971, 399667..399719) /gene="Cbr-glb-21" /locus_tag="CBG_17640" /standard_name="CBG17640" /product="Protein CBR-GLB-21" /note="C. briggsae CBR-GLB-21 protein; contains similarity to Pfam domain PF00042 Globin contains similarity to Interpro domain IPR000971 (Globin, subset)" /note="Predicted" /db_xref="GOA:A8XRM6" /db_xref="InterPro:IPR000971" /db_xref="InterPro:IPR009050" /db_xref="InterPro:IPR012292" /db_xref="UniProtKB/TrEMBL:A8XRM6" /protein_id="CAP35300.2" /translation="MKLNCFGRSSERSMELSSDEMQAVRDSWKRAKEREIGKHILQAL IERKPQFKDYFGIHVDEKKDDVFSCREFQLQSHRIQNFLDTAVSSLGFCPIGNIHQMA YRIGQIHFYRGVNFGADNWLTFKKVTVESVTNDCGSSGSSVIDLKSVPSIFPSNSSTV VIIGWEKFMSSVIREMKRGFLDEARRNCHDEETRF" CDS join(401836..401961,402534..402678,402791..402860, 403030..403171,403226..403335,404057..404127, 404920..405101,405145..405279) /gene="CBG17639" /locus_tag="CBG_17639" /standard_name="CBG17639" /product="Protein CBG17639" /note="Predicted" /db_xref="GOA:A8XRM7" /db_xref="UniProtKB/TrEMBL:A8XRM7" /protein_id="CAP35301.1" /translation="MSKLSDCEPLQKRDSITPRAYVKSYCCCCMFDQRREDPALFDEE NIRYRAFFGTMHIREVLLVLTIIKTILVFSFLFLQVMDTESPLGIFSATFAFLTVCIT NVLLVAGVRLKRYIFLIPYFTVCVLFIFVLILHLFVDFLDTANSKDTVEMQPILHNTV LLFMICFEFYMLSVVWRAFVYICDSNMQRQIEKIEKKNMMLLILILFSTSPFLVNSFL FGFGGGGGCGCGSSCGGCNMGCSCLPPPPPPVCMPPPPPPCPPPVVCAPPPPPCSCPP PVTMYQPCMVPQYVPRCGGCSSGYGGGYGGGYGGGCGRRRRSVNSNQTVY" CDS complement(join(405740..406123,406173..406404, 406769..406863,406910..407027,407078..407202, 407588..407674)) /gene="CBG17638" /locus_tag="CBG_17638" /standard_name="CBG17638" /product="Protein CBG17638" /note="contains similarity to Pfam domain PF02535 ZIP Zinc transporter contains similarity to Interpro domains IPR020003 (ATPase, alpha/beta subunit, nucleotide-binding domain, active site), IPR003689 (Zinc/iron permease)" /note="Predicted" /db_xref="GOA:A8XRM8" /db_xref="InterPro:IPR003689" /db_xref="UniProtKB/TrEMBL:A8XRM8" /protein_id="CAP35302.1" /translation="MAGYYLFLQLGCAFGLLAVTAFFGFIPLWLLEFLRKKGKDQSES GWLSYLSCFSGGVFMATCFLDVIPHVSENYQKMIEDYGVEYPVPLFQVFICCGFFFVY FIEEITGLIFGAGEHGHSHGHGHSHAGPIHVDNKEEKVTNLVVEEAAPWVVSDEKSNF LKSLTFAAAMSFHSLLEGFALGVQDSQTAIITLFLSLLLHKSIESFSVGLQISRSNSN KKKTVIFTILVYAFMTPLGSVLGSVLQNVGGPSFTKQFVIVLLESAAAGTFIYVTFLE ILAAEKNNRFNSLKQLAAILFGFILILMLQILFGHEAHGHAHGDPASSDHGPSINPIP SVSSFLVSSPAI" CDS complement(join(413620..413775,413823..414065, 414112..414204,414252..414396,414447..414602, 414649..414795,414856..414938,414982..415104, 415148..415229,415273..415658,415701..415783, 416016..416093,416139..416329,416371..416460, 416506..416647,416689..416782,416835..416897)) /gene="Cbr-pept-2" /locus_tag="CBG_17637" /standard_name="CBG17637" /product="Protein CBR-PEPT-2" /note="C. briggsae CBR-PEPT-2 protein; contains similarity to Pfam domain PF00854 POT family contains similarity to Interpro domains IPR000109 (Oligopeptide transporter), IPR018456 (PTR2 family proton/oligopeptide symporter, conserved site), IPR004768 (Oligopeptide transporter, peptide:H+ symporter)" /note="Predicted" /db_xref="GOA:A8XRM9" /db_xref="InterPro:IPR000109" /db_xref="InterPro:IPR004768" /db_xref="InterPro:IPR018456" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8XRM9" /protein_id="CAP35303.1" /translation="MGATHLQNDPRPGSPIDHQPTTWGEMFKKWPKQTFLIVGNELCE RFSFYGMRAVLTLYFFNILGFTQSSSTVLFHAFTVICYTSPLLGSILADGYIGKFWTI FFVSIFYSCGQILLAFSSIAPSESSHHPFLDLLGLLIVGLGTGGIKPCVSAFGGDQFP AHYTRMISIFFSMFYFSINAGSLISMWLTPHMRSMSCFGNDSCYPLAFGIPAFLMIVA TLVFMAGSYWYKKVPPKENIIFRVIGTIFTALRNKLSSSSSHHRSHWLEYSLNGHDCA MSPECKALHGNCAQRRYIGDIKQLFRVIVMMIPVPMFWALYDQQGSTWVLQAIGMDGN VWGWEILPDQMGVLNAFLILFFIPLFQSLVYPAIERCGFELTMLRKMACGGVLTALAF FVCGVVQLFVNSSLPYLPASNEAHLTIINTLPTCDFKVQIDSREPFDLLRTTGINPED LVIKPISFSGESMFQPNITFTNDSPNCPKFTAHPTFIATNSYVMTLTPNGWTYNSVKP QKPKSGNGEFGIGINLIVPCDKIPSSVTWESCNGTTGYSGNIALCKVETDTVSDAEHI CTPGQKGKFYSLSKSNHLEVHDYVKGDSSSYGKSYEAVDVRPGKYKLFYTDEAQKNFY AMDLGTVEQTHMGGVYLMTISTKSNGDSDILATTKSLVCHNRVSILWQIPQYVIITAG EVMFSITGLEFAYSEASPQLKSVVQALWLFTTAVGDLIVVIIFMLNIFSDVAVQMFVF SGIMLLVIFVFILLAVFYYEYADYSNESEVLTEKMMVDEEHTRI" CDS join(421822..421863,426261..426409,426465..426795) /gene="CBG17636" /locus_tag="CBG_17636" /standard_name="CBG17636" /product="Protein CBG17636" /note="contains similarity to Pfam domain PF00648 Calpain family cysteine protease contains similarity to Interpro domain IPR001300 (Peptidase C2, calpain, catalytic domain)" /note="Predicted" /db_xref="GOA:A8XRN0" /db_xref="InterPro:IPR001300" /db_xref="InterPro:IPR038765" /db_xref="UniProtKB/TrEMBL:A8XRN0" /protein_id="CAP35304.2" /translation="MLFRSKVSSKTIIQENSNFFKADGQQIRVIVDDRLPINSEGSLY YAQSVESAFWYPLLEKAYAKFRGSYEFIEYGLPMESFFHLTKRKPVSFDNESTTPLPS TSFGMYSKLQKLINDQCLVTCKLHDPQGNNQQYGSAFVVVDVMEKRRISNDGLVEQRN FVKLRHPSGRIKI" CDS join(431425..431516,431569..432182,432335..432708) /gene="Cbr-swt-3" /locus_tag="CBG_17635" /standard_name="CBG17635" /product="Protein CBR-SWT-3" /note="C. briggsae CBR-SWT-3 protein; contains similarity to Pfam domain PF03083 Sugar efflux transporter for intercellular exchange contains similarity to Interpro domain IPR004316 (RAG1-activating protein-1-related)" /note="Predicted" /db_xref="GOA:A8XRN1" /db_xref="InterPro:IPR004316" /db_xref="UniProtKB/TrEMBL:A8XRN1" /protein_id="CAP35305.2" /translation="MFEIFTQGFSFLNLLSILAFFTTVGLFFCGIPICRQIWKRKDTK EISGAPFLMGVVGGCCWMTYGWLKNDGTVKWVTGCQVILYTTYTIFYWCMTKKKLWIT LKVLGVIGICTSLVLGVHFFGMKIFHPLGIVCLTLNIADFAAPLGGIRVVIRRWATST LPLPLCIANFLVSSEWFLYGLLKNDFYLIFPNGVGSLLAFIQLLLFVVLPRKPGQRAP IVRLWLWIRGVKVEETKEIVAELGECDEKKMNRAQRWSQKIKMNVSTVAEELENVIYN LPTKDQFAYTHKIGDDDSSSEKTVETPEGSKKTSVVEAPKVSPVIEGVKDADFERKMR NSLRAAQEARETALRRTISSPDLSD" CDS join(437983..437986,438048..438221,438280..438334, 438789..439007,439054..439184,439229..439351, 439398..439510,439560..439805,440124..440312) /gene="CBG17633" /locus_tag="CBG_17633" /standard_name="CBG17633" /product="Protein CBG17633" /note="contains similarity to Pfam domain PF03372 Endonuclease/Exonuclease/phosphatase family contains similarity to Interpro domains IPR000300 (Inositol polyphosphate-related phosphatase), IPR005135 (Endonuclease/exonuclease/phosphatase)" /note="Predicted" /db_xref="GOA:A8XRN2" /db_xref="InterPro:IPR000300" /db_xref="InterPro:IPR036691" /db_xref="UniProtKB/TrEMBL:A8XRN2" /protein_id="CAP35306.2" /translation="MDANSPSVSSTSSNSSSNTPVRPQASTESTQETSSQKQTTRHPA WNRSSSQPAELRNGSFNEISDGNWTFLIDTQPPPAAVKGFGNVPIVSYDVVETMGDRK LKVCAVTWNINEKGAKVLNHLAQKIVDRGEEMESDLVFISLQEIPSTAPTFHEEARRI LEPLFSGHRMYLSHRAWSQMVIVFIRHKHIGYAIQPQVSFIASGAMAKPVRTKGAIAI CLRLYQRFIVLIGCHLSHATPQLRIQDYAKVVRTLRFPQLAKFHAHANDEIFASDAVI WTGDLNFRVTVENTVDWSKPDKLTDTVFNEVLESEELASHKMKQVAFADFAEPPLRFP PTHKYEPETDSYVPKKIPSFTDRVLFWMRCPEYLEPIKYDCMRGTTPSDHKAVFATFW LKVINKPVPERYRSQKSLENGTSTN" CDS complement(join(440730..440873,440926..441024, 441162..441258,441308..441581,441629..442139, 442187..442516)) /gene="CBG17632" /locus_tag="CBG_17632" /standard_name="CBG17632" /product="Protein CBG17632" /note="contains similarity to Pfam domains PF03446 (NAD binding domain of 6-phosphogluconate dehydrogenase) , PF00393 (6-phosphogluconate dehydrogenase, C-terminal domain) contains similarity to Interpro domains IPR006115 (6-phosphogluconate dehydrogenase, NADP-binding), IPR006113 (6-phosphogluconate dehydrogenase, decarboxylating), IPR006184 (6-phosphogluconate-binding site), IPR006114 (6-phosphogluconate dehydrogenase, C-terminal)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:A8XRN3" /db_xref="InterPro:IPR006113" /db_xref="InterPro:IPR006114" /db_xref="InterPro:IPR006115" /db_xref="InterPro:IPR006183" /db_xref="InterPro:IPR006184" /db_xref="InterPro:IPR008927" /db_xref="InterPro:IPR013328" /db_xref="InterPro:IPR036291" /db_xref="UniProtKB/TrEMBL:A8XRN3" /protein_id="CAP35307.1" /translation="MAEADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTTKLVDDFLA NEAKGTKIIGAHSIEEMCKKLKRPRRVMMLIKAGDAVDSMINQILPFLEKGDIIIDGG NSDYNHSNRRYQELKEKGISFVGCGVSGGEEGARFGPSLMPGGDPEAWPHIKDIFQKI AAKSNGEPCCDWVGNGGSGHFVKMVHNGIEYGDMQLIAEAFNLLSEAVELNYDQMAEV MDDWNKGELESFLIEITANILKYRDEKGEPVVPKIRDSAGQKGTGKWTCIAALEYGLP VTLIGEAVFARCLSALKEERVYASEHLSGPHVAPETVIQDKRVFIKQISKALYASKIV SYAQGFMLLAETSKQFNWDLNFGAIALMWRGGCIIRSRFLGDIKRAFDNNKDLPNLLL DAFFTKAISEANDSWRVVVGAAIRLEIPVPAFSSALAFYDGYKRKVLPANLLQALRDY FGAHTYELLDQPGTWVHTNWTGKGGRVTSNTYNA" CDS complement(join(444663..444782,444826..444885, 444943..444984,445028..445111)) /gene="CBG17631" /locus_tag="CBG_17631" /standard_name="CBG17631" /product="Protein CBG17631" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRN4" /protein_id="CAP35308.1" /translation="MKTSIFFCNLGIFFLLIENVFGAAGGGYHEPSIETIEKCHNQEK EKCTCHKKDPFCNRSFAMSHWNSIFKCISAVQKTMKNVDVEKKKDEKEEEKEEEEEE" CDS complement(join(445221..445304,445722..445796, 446121..446180,446224..446262)) /gene="CBG17630" /locus_tag="CBG_17630" /standard_name="CBG17630" /product="Protein CBG17630" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRN5" /protein_id="CAP35309.2" /translation="MTISATFGQEDEQSGMTAFESIRRLKECIDLIDKPEFKKMCEGK LGKEKDECVEKFTKKMMPKLNACIERSRRPRTIPLPHTEEL" CDS complement(join(446431..446595,446647..446855, 446912..447037,447081..447318,447372..447548, 447598..447704,447749..447823,447870..447995, 448041..448239,448284..448427)) /gene="Cbr-ugt-54" /locus_tag="CBG_17629" /standard_name="CBG17629" /product="Protein CBR-UGT-54" /note="C. briggsae CBR-UGT-54 protein; contains similarity to Pfam domains PF04101 (Glycosyltransferase family 28 C-terminal domain) , PF00201 (UDP-glucoronosyl and UDP-glucosyl transferase) contains similarity to Interpro domains IPR002213 (UDP-glucuronosyl/UDP- glucosyltransferase), IPR007235 (Glycosyl transferase, family 28, C-terminal)" /note="Predicted" /db_xref="GOA:A8XRN6" /db_xref="InterPro:IPR002213" /db_xref="UniProtKB/TrEMBL:A8XRN6" /protein_id="CAP35310.2" /translation="MKKALLFLILPILGNCLNILFYVSVIAQSHIPFHNTAIKILLDR GHTVDLVVAHLNEMVKVHFPAGVRQNYTFGYEDPNFWSKNALHLFNIFEKKPIPIAEF LAFDDLTYQLCENVVRNPNLLEYIKKGKYDIGLSSDYDPCANTIMHAGGVPVKASMIP TPMFQPQIYSAGLPTLASLYGTVLYPKSDESFFSRLFHLVRHTYNIYFVTPKLMNRYN SLLSKTFGPTFPTVEEIERNVDLVLVNSNEIIEKPRPISHKIKYIGGMGKKKAQPLSK EFNGILDSAPKGVVLFSFGTQVPTKKVPIEVRRNCVAAFKKFPEFLFLWKYDNLTDDA EMFENVQNIHRVEWLPQTDLLGDHRVKAFISHMGLNSYLELAAAGVPVLSIPLFIDQH HNALNAAAREIGVTVEKDEVTVENMVDALQKLLFDPKYERNAKMISKMMLEKPEQSEK LFVDWVEYAARNPGLHKILNLPGAELTPFWYYSGDVLVVIFIISMFSIFIFWRILNFL RCRISIRSKSKSE" CDS join(450932..451033,452221..452454,452504..452565, 452999..453119,453166..453267) /gene="Cbr-npax-3" /locus_tag="CBG_17628" /standard_name="CBG17628" /product="Protein CBR-NPAX-3" /note="C. briggsae CBR-NPAX-3 protein; contains similarity to Pfam domain PF00292 'Paired box' domain contains similarity to Interpro domain IPR001523 (Paired box protein, N-terminal)" /note="Predicted" /db_xref="GOA:A8XRN7" /db_xref="InterPro:IPR001523" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR036388" /db_xref="UniProtKB/TrEMBL:A8XRN7" /protein_id="CAP35311.1" /translation="MLDVHCCDHEQCGSSVIDISTPHTLQRDFNNWLNGIEVPNSYES QQSDSSSSNEDSGSKASSPNTMRPNPSQDGRKNRKKGTNLYGRPYCPGRPLSMEERTR IIQLHNSGMKVNAISKSLCISHGCVSKIISRFRATGVLLPACSPEQRKSRKRKSSMEG SSMDQSFIPVYVAMQDANGNEYLNEYYSLPVVVKSEPSSYDYTVSI" CDS complement(join(454373..454510,454561..455444, 455494..455807,455857..456089,456143..456227, 456284..456586,460450..460459,460681..460728, 464897..464898,465014..465253,466196..466305, 466480..466593,466642..466707)) /gene="CBG17627" /locus_tag="CBG_17627" /standard_name="CBG17627" /product="Protein CBG17627" /note="contains similarity to Pfam domain PF02891 MIZ/SP-RING zinc finger contains similarity to Interpro domain IPR004181 (Zinc finger, MIZ-type)" /note="Predicted" /db_xref="GOA:A8XRN8" /db_xref="InterPro:IPR004181" /db_xref="InterPro:IPR013083" /db_xref="InterPro:IPR040797" /db_xref="UniProtKB/TrEMBL:A8XRN8" /protein_id="CAP35312.2" /translation="MADSTFAEHVATTNTRLASLRCNLVDPMTFPEACSELTKWCTDQ RAFTANFEDNLMAALECAMDYGTRENYDYMLTHGLVGACFTHRKHLSKNSASNSHRRW YEQMRRLKKNGGKRKRAPPKPKEPIVVVPVQQTNGALPVLTSPCGGPSSAAPQQNGAG QPSAAENNMFSPTNSDGEDENPEYTKEPTFSAPARYQSMWAPPGVPGSSAGHMQPGGA TPYPGPMNPGQQGQGPHPGMPAAYSAGQMQLPYGQMEGNHAMYDQRAMANQRAAAAAA AAGRPQGMMPPDYPQMPMGQNPNQMMRMPVQYPPGHPQMPGHPQMQYGQMMRAPPVSV YGQMQHAQQYAVTAHPNPATPFILPEVRALYETGCGYLVERDLCSEGMIPFGTTGVDA IITPDAFGFLETNPMADVILSVWPSVKGGNEQETRFQVYVNNVCVLNDEAPVKVVSVK ALLRSGPNRIQFGYSGPQQIHSFACEFVTKRGISEMRSFVMRKRGAEANLLANQQKNI HQQSALKKNAGIVTVGLNCGLTKKRMLTPARHHDCKKCVFDFAQLININKNKTRYYCQ SCQAHFKLDDINIDWFLMNFTTACPAGVNEIIVDKNGACRPGDVEEVKPKRGKKKAEA AAAVAMDGGAHPIKRIKSESHVKQEPGMFPDMHGRNIPFSPMPMPGSVPPDWTRLQSP SFSMQSPNKIQLGPATPATPGMVFQNPASAGSMLNMSSPRGTMLPPHHPMMPPHDPSM HMRSGSAPYTPESVKNDKNDELLMNIEGLYITEQNIIDDPRLYPHYVEGTKEVIFEDI LVYEVENSPKEVQPSENTHTLLAPGSTSSSNASTFTPPFDDIHLGNRPSH" CDS 479267..479455 /gene="CBG17621" /locus_tag="CBG_17621" /standard_name="CBG17621" /product="Protein CBG17621" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRP0" /protein_id="CAP35314.2" /translation="MRFVFKASREEIVNATSLQDVKTSMADEYKKMSNLVIRVGVRRM VYETMGMFMNMTDEIRLR" CDS complement(join(479667..480050,480177..480242, 480507..480610,480694..480787,481101..481179, 481224..481430,481484..481632,481676..481822, 481870..481965,482014..482246,482292..482458, 482676..482810,482856..482938,483989..484090)) /gene="CBG17620" /locus_tag="CBG_17620" /standard_name="CBG17620" /product="Protein CBG17620" /note="contains similarity to Interpro domain IPR000615 (Bestrophin)" /note="Predicted" /db_xref="GOA:A8XRP1" /db_xref="InterPro:IPR000615" /db_xref="InterPro:IPR021134" /db_xref="UniProtKB/TrEMBL:A8XRP1" /protein_id="CAP35315.2" /translation="MTVSYNLDVSSASIFSFLRLQLRWKGSIWKYLLKELFFFILAFG VVSGVYRSNLIIGENTRKIWDNFAALFDQTMEFIPLTFMLGFFVTIIVRRWNDIFANL GWVDNTAITIANYIRGTDDRTRMIRRNVIRYMVLTQVLVFRDISLQVRRRFPTLESIV LAGFMLEHEKEMLCNVACKYSKYFVPIQWSTGLLVEARTEGKIAADLLMNEIGKNIIE FRKGLALLSNYDWVPIPLAYPQVVFLAVRSYFFMALIARQSVLLDGKDPEQPSILYPI VPFVMSVLQFIFVVGWMKVAESMINPLGEDDDDFECNFLLDRNLAIGLIIVDDCYNQI PTVEKDVFWCSDVEPLYSVDTAMIPKNPQIGSAANYEVKTDEEEVMMMPHMDDVDMFD FESTNHLIPRKTFSVISIQRPFGSRASLASRKRSMMFDQLRGRMAKKQNRNNMFQNSA SQATLHYNFESQAPSEINLSTLEMTAPKRKTSTGKLGSTSESNHCFLNVAEEQHKLSA EVLPIVLEEDEERSKMLEKDKTKFSRVIGVNREQNTGNAPWCGDTIPSKRRTRESGSR SGRSKSSSRFSTFIQGGGGGQKALRSARSTSRGRRSNSKRSRRSSRSRSRSVSTARES SRRRVRRASKASRCDRSRSRNRSSSRRPSSRRSARRSVSRLSNRRTTPKVSRSKWVT" CDS complement(join(487294..487446,487565..487899, 487946..488036,488083..488262,488349..488531, 488578..488785,488833..489102,489157..490016, 490065..490491,490540..490775,490824..491034, 491082..491204,491524..491678,491722..492063, 492132..492377)) /gene="CBG26458" /locus_tag="CBG_26458" /standard_name="CBG26458" /product="Protein CBG26458" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IKP5" /protein_id="CAS00475.1" /translation="MVNTAKVITVGRFASFFCILLRTNPFIASEGYEIVDANEEETSE VTKEAQMRSPGKSWSEECWKQMTVEKVQLIRNRRLQYSNNIEQEQMEYRVVYNEEEIR SIASDGLGVDSDGIIGIGDPRQGVMLYSTPATAHSGRFLYSNIPITVVMFRTATSGKS FEVPMSTDRIPPSKNHTAHVTMNTEGASLKFHRYLLEHYLGGVFHYEYLPNMTDIYKY PSMILPYAVITYRLPDTATSTTSPQKLSKIHRPLLIFRSDEICAHTLVFNSKEIPAMV CLPSILTEVPYVLHETRSEPVAYSLNDLSLFPELEALRSPEYFGKILLMDSVKIADES LLTHYVLRFTSEHKYFVDLFRKGKYMLVWTSSPFTIFYIPSGDVSAEFGLPHIENHMH LIVQRSQIPYPEDVASKTSSLFCYEEEPAGFSQFWSAGQEYSNEIVEIDEFGSEVYED DYDEEEADQRREEAIHQEEGEEKDELVTSANYEFISSPIDPNLKGCISLRYDDGRRKD KVVTFKTDLVNIHYFERNSVSPEYHEDASLSFDEKRKKEEKVDPESQQKTDELFKNAL AANRVENAQSPLTIAQSPLSGSPGSSNAVSPGNHPTPSPENITFATKPAQNAFILPPT PPPPAFIWNLPPPPLPNFSVPPPPIPSLPLLPPHLQTTSSAPKPAFPTGVPPPISYVI PPPPRIASSAPKPSSPTGVPPPVLPSPGALIPPPPGNTTKNNPAPMGSIAPPALYVQP KLSTPYARPECLIPVIGLPQDPRTKPTIPLPDISKPPPNFPVAPPVLPTPLEEEEPGE ESMDLEEEDSMMEVDEDNGTEECAGKISKSRDPSEDNDILMKCFTSDSSVSTSKPDEM TTAVEKFQDSVLNSIRDSPNIMKLLTKKNEEPSSSSAADSKAQDTDFRKLPINKLAFA ITKSKPPTTITAPNVLNDSDQDEGVVEGSKVKKSDTPKDIDYRKTEPSTSRHSSRNSN DDNPLNDRLADISLPRGTPQSEQAMRLINNFQGKLRAINKDSESKVQNVNEHLAYVSR LAQLTPTPQPSQQEAASPSNSLAALFPLLSNANLTAEGLGIPKTVSSEPSQKCSEQSN TSQLSSISDDDIIFDGEVKINNQPNGGKVIIPAKNVRKAADAPPGITSRYQQGNSSPL QNRQFSNPPNNWRTIIRNQDIRQESRDWVNKLIPFSDPSVIGMCIFLDPDWKFGSDNV SANELYSLMNEILQQNRVSKPITPRIRATIYIHSCLDKEIWKKRTTTLRDFHEKIDRL KNGAAQVIKTLPEHKCDRESNIDRVTAFFEADYQFQFILMILDFPEDSLAGRSYTERG IKVRNIRQVLQMIEDTLKT" assembly_gap 493811..493820 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" CDS complement(join(494055..494560,494609..494778, 494826..494899,494947..495135,495188..495514, 495565..495730,496243..496355)) /gene="CBG17619" /locus_tag="CBG_17619" /standard_name="CBG17619" /product="Protein CBG17619" /note="contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domain IPR011701 (Major facilitator superfamily)" /note="Predicted" /db_xref="GOA:A8XRP2" /db_xref="InterPro:IPR000849" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR020846" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8XRP2" /protein_id="CAP35316.2" /translation="MPPRIGPRGTENKDFLTRVTGQKWSRNHYFVFFHTFFSFAMIHA TRKTLATVKPSIIHTWTSNSTGPPFMESEEHATRFLGLLDTSFMITYAMGLFISGTLG DHFNPRKMLSIGMACSAFSVFCFGFLTETYHIYSAPLYVFLWVLNGFSQSVGWPIEVA IMGNWFGKNARGTVMGVWSACGSVGNIIGTLIASHVLVFGYQYPFLIICSLLFSYSII AYFQLPSAPWDLDSGSHHESDSKEKLELNRPPPLGFFRTWLIPGVISFSLAFACLKFV NDGFFFWLPYYLHDGLNWPETFADALSTWYDVGGIIASIVAGAASDRMKSRTSLIFYM LLASFVSLYVYSRSPASYTWNAFLLLLAGFFVGGPLNMISSSVVADLGKSDKLKGNSE ALATVTGIIDGTGSCGSAVGQFMIPNIQHWYGWNAVFYGFMAMVSYIELLEMYKFSFQ MACTTLCIAPVLRKERRKQQRMKYRENKALLNSDSDSTDSEDGVFLSDKTTRRKHHGT PQSTFI" CDS complement(join(496646..496693,496779..496847, 496897..497162,497441..497516,497559..497652, 497697..497770,497826..498344,498393..498567, 499924..500027)) /gene="CBG17618" /locus_tag="CBG_17618" /standard_name="CBG17618" /product="Protein CBG17618" /note="contains similarity to Pfam domains PF07690 (Major Facilitator Superfamily) , PF00083 (Sugar (and other) transporter) contains similarity to Interpro domains IPR011701 (Major facilitator superfamily), IPR005828 (General substrate transporter)" /note="Predicted" /db_xref="GOA:A8XRP3" /db_xref="InterPro:IPR000849" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR020846" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8XRP3" /protein_id="CAP35317.2" /translation="MTDEIPTRKQSFVTRITGQKWTRYHVRVFIHTFIIYVLFHAARK TLSTVKPSLINVWTSNASNPNGAPLFESKQSAAEFLGALDTGFMITYAIGLYICGYLG DHYNPRRILALGMALSAISVFTFGFVTETFHIYSAPLYAILWISNGFFQSVGWPLVVC IMGSWFGKTARGTVIGTWSTNASVGNILATLIASWTVNIGYQWPFLIICSGLFFYSIL IFFHLPSAPWEVEKEVREEGKEQMKRNDSERPPPLGFFRAWLLPGVIAFAISYLCLKL VNDGFFFWLPFYLHNGLHWPESTADGLAAWYDVGGILSSIIAGALSDRMKSRTAIVFT MLLLSTGTLLAYAHSPESYYWNAFLLLVVGFFIGGPLNMIAGCITSDLGKSEVLRGNA EALATVTGIIDGTGSVGSAIGQWLIPLVRNWFGWDAIFYGFMIMVVLSALCISPVLWR ERKENKHQKVSQKTDDPVNRMEMS" CDS complement(join(500597..500764,500814..501079, 501152..501395,501630..502160,502218..502389, 502434..502546)) /gene="CBG17617" /locus_tag="CBG_17617" /standard_name="CBG17617" /product="Protein CBG17617" /note="contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domain IPR011701 (Major facilitator superfamily)" /note="Predicted" /db_xref="GOA:A8XRP4" /db_xref="InterPro:IPR000849" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR020846" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:A8XRP4" /protein_id="CAP35318.1" /translation="MPRIRFRNDVSPDSFWARITGQKWSKYHYFVFAHTFMSYAMLHA TRKTLSTVKPSLIHTWTSNTSTPTGPIFPTQQAAAEFLGILDTGFLIAYAIGLYICGI LGDNYNPRRLLAFGMMASSICVLCFGYLTETFHVYSPLIYSFLWILNGFIQSVGWPVE VSIMGNWFGHNARGAVMGAWSSCASVGNIIGTLIASYTLFLGYQYSFLIACSLLFIYS FLVFFQLPSAPWEVSSENLPGQMEEEQEEDPDEPTERPPPIGFLKAWLLPGVIAYSLA YACLKLVNYGFFFWLPFYLHAGLHWPESYADSLSTWYDVGGILAALLAGAFSDHMRSR TPVVFIMLLMATVSLYIYAHSPESYNWNAFLLLVAGFFIGGPANMISSSITADLGKCE QLRGNAEALSTVTGIIDGTGSVGAALGQWFIPSVQHWFGWDAVFYGFIVMILCTALCL CPVLYKEHKDRRHHRSEEVDALLNSDSDENASDDIQEVRRRPTNSNV" CDS join(503445..503552,503803..503904,503958..504503, 504550..504958,505007..505455,505501..505557) /gene="Cbr-hars-1" /locus_tag="CBG_17616" /standard_name="CBG17616" /product="Protein CBR-HARS-1" /note="C. briggsae CBR-HARS-1 protein; contains similarity to Pfam domains PF00587 (tRNA synthetase class II core domain (G, H, P, S and T)) , PF03129 (Anticodon binding domain) contains similarity to Interpro domains IPR002314 (Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain), IPR015807 (Histidyl-tRNA synthetase, class IIa, subgroup), IPR004154 (Anticodon-binding), IPR004516 (Histidyl-tRNA synthetase, class IIa)" /note="Partially confirmed by transcript evidence" /db_xref="GOA:E3CU64" /db_xref="InterPro:IPR004154" /db_xref="InterPro:IPR004516" /db_xref="InterPro:IPR006195" /db_xref="InterPro:IPR015807" /db_xref="InterPro:IPR033656" /db_xref="InterPro:IPR036621" /db_xref="InterPro:IPR041715" /db_xref="UniProtKB/TrEMBL:E3CU64" /protein_id="CBX33102.1" /translation="MPAELNAEQRKALEDEIKVMGDEIRKLKTEKADPAVMFRTLASK LAFSIRLSEETVVKPRIAYAQRSGRRIKERVNKMLEKKKELGGGEEKPGKFVLKTGKG TRDYGPAQSALRNSVLQNVVETFNKYGAETIDTPVFELRDVLMGKYGEEGGKLVYDLQ DQGGELLSLRYDLTVPFARYLAMNKITNITRYQIAKVYRRDQPVMSRGRYREFYQCDF DIAGQYDLMLPEAECLGIVNELLTKLEIGEFFINLNHRLILEGMFAVSGISPKDFKTI CSSVDKLDKTPWAEVEEEMIKEKFLTKEQTSKLGELVRFRELNSNLNNLELLEKMSAL PELGQNEKFKKGAEELKVLIGYLEVDGVTTVRYEPSLARGLDYYTGAIYEAVAPKALE GTAAEKAEDTAGQPVGVGSVAAGGRYDGLVNMFDSKLKVPCCGVSFGIERLFAIMEAR QKSAVRTTQTEVYVASAQKNMVIERKKLLRTLRAAGIKSEMPLKANPKLLTQFQYAEE RRIPLVVLIGERELQEGIVKLRNVVSREEKDVPLDSLVSTIRDNLAAL" CDS join(505888..505998,506045..506304,506339..506973, 507233..507456) /gene="CBG17615" /locus_tag="CBG_17615" /standard_name="CBG17615" /product="Protein CBG17615" /note="contains similarity to Pfam domain PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) contains similarity to Interpro domains IPR000571 (Zinc finger, CCCH-type), IPR000504 (RNA recognition motif domain)" /note="Predicted" /db_xref="GOA:A8XRP6" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR000571" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR035979" /db_xref="InterPro:IPR036855" /db_xref="InterPro:IPR039171" /db_xref="UniProtKB/TrEMBL:A8XRP6" /protein_id="CAP35320.2" /translation="MSMSKSSYSQYNRKNWEDSDFPILCETCLGNNPYMRMMKDKHGR ECKICERPFTTFRWQPGKGARYKNTELCQTCAKVKNVCQTCMFDLEYGLPVQVRDHEL QIADNIPKQGANRDFFLQNVERNSRTLGQGDGTQPIAQIANNMDQAAHDRLRRMARSQ PYYKRNAPHICSFFVKGECKRGEECPYRHEKPTDPDDPLSRQNIRDRYYGTNDPVAEK ILNRAAAAPTLSPPADTTITTLYIGNLGPNGPQQVTEKDLNDFFYQYGDIRCLRVLTE KGCAFIEFTTREAAERAAERSFNKTFIKGRRLTIRWGEPQAKRAADNSNYVTPVPSVP ILPIPDGLAPSTSSQQRFTGSIPRPPVPPTFSAPTRLVVPNVRPMKAGEPSSSSSSIY YPSQDPTRLGAKGDVIE" CDS join(507766..507864,508137..508436) /gene="CBG17614" /locus_tag="CBG_17614" /standard_name="CBG17614" /product="Protein CBG17614" /note="contains similarity to Pfam domain PF00787 PX domain contains similarity to Interpro domain IPR001683 (Phox homologous domain)" /note="Predicted" /db_xref="GOA:A8XRP7" /db_xref="InterPro:IPR001683" /db_xref="InterPro:IPR036871" /db_xref="UniProtKB/TrEMBL:A8XRP7" /protein_id="CAP35321.2" /translation="MALLNIQAVSAQMDANFNAKILNFRMVEEGKYTVYRIQITVDTY TWTVERRYSDFDAYDIQRFTDRKKSFLPPKKRLGNKDLEFIEERRIELEKYVRALLEL EVWYQKQKNVHSLPLISAKFFDFHQYVSYL" CDS complement(join(508608..509003,509056..509372, 509427..509997)) /gene="CBG17613" /locus_tag="CBG_17613" /standard_name="CBG17613" /product="Protein CBG17613" /note="Predicted" /db_xref="GOA:A8XRP8" /db_xref="InterPro:IPR026624" /db_xref="InterPro:IPR032776" /db_xref="UniProtKB/TrEMBL:A8XRP8" /protein_id="CAP35322.2" /translation="MAQLLLFPDPVPRDFSIRYHHIESPKPSEDPLHNPWFPSSSSSP HPETVTENTRVESGRDPRHITEDSIEENGEERIAHFEYYEGAEEFPIKVPPEQTAALI HQSPANLNMAVLPGRCVRAFLDSFALIISLALVILQFGLLDWYYLNVTGENVWAAWIG PDCVVVLILGVLGVLAIKFNAVQMEECCSIDSRVKYACFAWGVYAVILIAKVATCFRL FYEDIPPTPLDNNDKLFDDFLFKAGLSLSVLIFLFIFESHHYTPLVSVRQVYISYLVA AICLDLIDNIYFLDLLWQASKDKWNLELWLELTILIVACINFFMPTFALAKLRYAKVP RFLLVSEKLWAFLYVLLVNGPFLGLRIYLYIILEVQQHGKKFDPSLFAVKNIAMIYIA LRELWTRLQYWRMKRRAALSRNELAAAIHHQDEEQ" CDS join(510773..510805,514153..514312,514865..515244, 515293..515423,515656..515911,515961..516143) /gene="CBG17612" /locus_tag="CBG_17612" /standard_name="CBG17612" /product="Protein CBG17612" /note="contains similarity to Pfam domains PF00560 (Leucine Rich Repeat) (2), PF12799 (Leucine Rich repeats (2 copies)) (2)contains similarity to Interpro domain IPR001611 (Leucine-rich repeat)" /note="Predicted" /db_xref="GOA:A8XRP9" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR003591" /db_xref="InterPro:IPR032675" /db_xref="UniProtKB/TrEMBL:A8XRP9" /protein_id="CAP35323.2" /translation="MRRNDGEKEEKEIHSIVDDLSLRLGNLGDGWLESSQTSPKYFEF TPIEVHAITERLRLPEPTAPDVNMVADIGNTIDFLHRVRALKIRGQKGYVGTSNIVWN SLDMSLYFCKSLKALWIADSDVCRINGIKSIRETLRRLVVHYSMKKIKDLLFDEEDLE AALMVEEMGTWKCLEEVDLSFNEIKCFDESMKLLPEVRILNVSYNSITDIGTNLAFLS SLTELDLSNNTITKIDAWNEKLGNVKKLILSENAIEDLTGLGKLYSLEYLDVKGNNIQ TLEAVQGIGKLPCLEILLLRDNPIRKLVEYRTKVLELFGERSSELKLDGRRPEHRELD TVRVRMALRKAKEEKEERERRRKERIEERIRYISGEDVSPNVSGSF" CDS complement(join(516929..517068,517121..517205)) /gene="CBG17611" /locus_tag="CBG_17611" /standard_name="CBG17611" /product="Protein CBG17611" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRQ0" /protein_id="CAP35324.1" /translation="MSVSHKTLLFFFTVLLLVTIIDAQRFIVRRDAGSNEELNGLLSN SRRYAANGNSPMLKRNSLLDNLYNIGYFQY" CDS complement(join(519839..520209,520872..520997, 521050..521191,521243..521302,521352..521420)) /gene="Cbr-sdz-13" /locus_tag="CBG_17610" /standard_name="CBG17610" /product="Protein CBR-SDZ-13" /note="C. briggsae CBR-SDZ-13 protein ;" /note="Predicted" /db_xref="UniProtKB/TrEMBL:A8XRQ1" /protein_id="CAP35325.1" /translation="MKLFQSIRHVYGSFKQKRTGSLDSLFMDSKRIKFDVKLRIGNKY ETRSMELRRRFNESGKQEWSLYIIKYADYTSYDYFPLSDSFICQLFDETTKNLKCTLV LVENVLRLKMRNLSDKWRFVEFIRANLETKAHHFSGEIDASPLRTFPSHPIHVFFHHT CLLFISQNSGRMLAHKSLFDMDLLIFKDQKISFVCKSPLELWSIHMENSEKLSDLMSE AIEIRGLPVIINDVVEHKKRGEEPEYVQIPSSVYTDF" CDS complement(join(522642..522778,522835..522989, 523034..523200)) /gene="CBG26459" /locus_tag="CBG_26459" /standard_name="CBG26459" /product="Protein CBG26459" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IKP6" /protein_id="CAS00476.1" /translation="MAPYTSEEIWYYLNIIRNSKTNNKAEIHRKLLNMRKTKDERCPN RKTITRWVDRFLDGNRNFKRNTERSPSPTISVSRSKTPASRQGISDAENRVKLNEQLA ALELIVRIAPNLSLKGLVKFNTTDTPLEQVMFNVMALNFAVKNGAPNGTD" CDS complement(join(524609..524992,525036..525299, 525344..525383,525431..525504,525551..525610, 525658..525771)) /gene="CBG17607" /locus_tag="CBG_17607" /standard_name="CBG17607" /product="Protein CBG17607" /note="Predicted" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR036034" /db_xref="InterPro:IPR040264" /db_xref="UniProtKB/TrEMBL:A8XRQ2" /protein_id="CAP35326.1" /translation="MDALVKSRLDAIFNGKKVPPLDFVEQFEFTANVKKEDGLGLELK HLMVVSITYNSPCQGQIKVGDVLLSLNGTPITGQDKMGKLIQTIFNGQLTTKMSVKVM RLKRRIPRPSTFPPLYKHEGYTNDTLVLYNLKGYFHLGLDIKELDGKLIVCDFVENSL ADITFSLGEAILDVDGEKTSTCTSFNDRVRKSLEIRNYCLVTVEVPSTDPLKNLLRNQ ITKAVKDVGRINKLPLDAATYAAEGVAIFKKCCDGPLKSAYVGDKHGNRTSENASRLK MEDKVKETDVPTGWNSRLFVRLPPAKTLESETLSQ" CDS complement(526362..526484) /gene="CBG26460" /locus_tag="CBG_26460" /standard_name="CBG26460" /product="Protein CBG26460" /note="Predicted" /db_xref="UniProtKB/TrEMBL:B6IKP7" /protein_id="CAS00477.1" /translation="MKIFFSGVVFRYINERDKRIAIKNEREGQLKTDFGLLPEQ" CONTIG join(complement(CAAC03002208.1:1..4468),gap(108),complement (CAAC03002207.1:173..109017),complement(AC084542.1:6971..7506), complement(CAAC03002206.1:1..48093),gap(10),complement (CAAC03002205.1:1..24795),gap(952),complement (CAAC03002204.1:1..67805),gap(10),complement (CAAC03002203.1:1..7499),gap(277),complement (CAAC03002202.1:1..10132),gap(376),complement (CAAC03002201.1:1..6799),gap(10),complement (CAAC03002200.1:1..10324),gap(56),complement (CAAC03002199.1:1..5284),gap(570),complement (CAAC03002198.1:1..88400),gap(791),complement (CAAC03002197.1:1..107670),gap(10),complement (CAAC03002196.1:1..36615)) //