LOCUS       GU830833                 903 bp    RNA     linear   VRL 25-JUL-2016
DEFINITION  Lassa virus strain Lib07-206 glycoprotein precursor (GPC) gene,
            partial cds.
ACCESSION   GU830833
VERSION     GU830833.1
KEYWORDS    .
SOURCE      Mammarenavirus lassaense
  ORGANISM  Mammarenavirus lassaense
            Viruses; Riboviria; Orthornavirae; Negarnaviricota;
            Polyploviricotina; Ellioviricetes; Bunyavirales; Arenaviridae;
            Mammarenavirus.
REFERENCE   1  (bases 1 to 903)
  AUTHORS   Olschlager,S., Lelke,M., Emmerich,P., Panning,M., Drosten,C.,
            Hass,M., Asogun,D., Ehichioya,D., Omilabu,S. and Gunther,S.
  TITLE     Improved detection of Lassa virus by reverse transcription-PCR
            targeting the 5' region of S RNA
  JOURNAL   J. Clin. Microbiol. 48 (6), 2009-2013 (2010)
   PUBMED   20351210
REFERENCE   2  (bases 1 to 903)
  AUTHORS   Olschlager,S. and Gunther,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2010) Virology, Bernhard-Nocht-Institute for
            Tropical Medicine, Bernhard-Nocht-Str. 74, Hamburg 20359, Germany
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Mammarenavirus lassaense"
                     /mol_type="genomic RNA"
                     /strain="Lib07-206"
                     /isolation_source="serum"
                     /host="Homo sapiens"
                     /db_xref="taxon:3052310"
                     /segment="S"
                     /geo_loc_name="Liberia"
                     /collection_date="2007"
     gene            15..>903
                     /gene="GPC"
     CDS             15..>903
                     /gene="GPC"
                     /codon_start=1
                     /product="glycoprotein precursor"
                     /protein_id="ADI39445.1"
                     /translation="MGQVITFFQEVPHVIEEVMNIVLIALSILAVLKGLYNIATCGII
                     GLVTFLLLCGRSCTTTLYKGVYELQTLELNMETLNMTMPLSCTKNNSHHYIMVGNETG
                     LELTLTNTSIINHKFCNLSDAHKKNLYDHALMSIISTFHLSIPNFNQYEAMSCDFNGG
                     KISVQYNLSHSYAGDAATHCGTVANGILQTFMRMAWGGSYIALDSGRGGWDCIMTSYQ
                     YLIIQNITWEDHCQFSRPSPIGYLGLLSQRTRDIYISRRLLGTFTWTLSDSEGKDTPG
                     GYCLTRWMLIEAELKCFGNT"
BASE COUNT          265 a          186 c          203 g          249 t
ORIGIN      
        1 gagtgtcttt tgacatggga caggttataa ctttctttca agaagtacct catgtgatag
       61 aggaagtgat gaacatagtg cttattgcac tgtccatact tgcagtgcta aagggcttat
      121 acaatattgc aacatgtggc attattgggc tggttacctt ccttttacta tgtggtaggt
      181 cttgtacaac taccctttac aaaggggtct atgagcttca aaccctggag ctaaacatgg
      241 agacactgaa catgaccatg cctctttcct gcacaaaaaa caatagtcac cattatataa
      301 tggtgggtaa tgagacaggg ctggagctga cattgactaa cacaagtatt atcaaccaca
      361 agttctgtaa cctttctgat gcccataaga aaaaccttta tgaccatgcc ctcatgagta
      421 taatttcaac cttccattta tccattccca acttcaatca atatgaggca atgagctgtg
      481 actttaacgg agggaaaatc agtgtgcagt acaacctgag tcatagttat gccggagatg
      541 cagccacaca ctgtggtaca gttgcgaatg gtatcctaca aaccttcatg aggatggctt
      601 ggggtgggag ctacatagcc cttgattcag gtcgaggtgg atgggactgc atcatgacca
      661 gttatcaata tttgataatc cagaacataa cttgggaaga ccactgccag ttttcaagac
      721 catctcccat tggctatctt gggcttcttt cgcaaagaac aagggatatc tacattagca
      781 gaaggctctt ggggacattc acatggacat tatcggattc cgagggcaaa gacacgccag
      841 gaggatattg cctaaccaga tggatgttga ttgaggctga attaaaatgc tttggtaata
      901 cgg
//