LOCUS GL456185 54530079 bp DNA linear CON 15-JUL-2020 DEFINITION Mus musculus chromosome 19 genomic contig MMCHR19_CTG1_2, GRCm39 reference primary assembly C57BL/6J. ACCESSION GL456185 KV575242 VERSION GL456185.3 DBLINK BioProject: PRJNA20689 KEYWORDS . SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 54530079) AUTHORS Church,D.M., Goodstadt,L., Hillier,L.W., Zody,M.C., Goldstein,S., She,X., Bult,C.J., Agarwala,R., Cherry,J.L., DiCuccio,M., Hlavina,W., Kapustin,Y., Meric,P., Maglott,D., Birtle,Z., Marques,A.C., Graves,T., Zhou,S., Teague,B., Potamousis,K., Churas,C., Place,M., Herschleb,J., Runnheim,R., Forrest,D., Amos-Landgraf,J., Schwartz,D.C., Cheng,Z., Lindblad-Toh,K., Eichler,E.E. and Ponting,C.P. CONSRTM Mouse Genome Sequencing Consortium TITLE Lineage-specific biology revealed by a finished genome assembly of the mouse JOURNAL PLoS Biol. 7 (5), e1000112 (2009) PUBMED 19468303 REFERENCE 2 (bases 1 to 54530079) AUTHORS Church,D.M., Schneider,V.A., Graves,T., Auger,K., Cunningham,F., Bouk,N., Chen,H.C., Agarwala,R., McLaren,W.M., Ritchie,G.R., Albracht,D., Kremitzki,M., Rock,S., Kotkiewicz,H., Kremitzki,C., Wollam,A., Trani,L., Fulton,L., Fulton,R., Matthews,L., Whitehead,S., Chow,W., Torrance,J., Dunn,M., Harden,G., Threadgold,G., Wood,J., Collins,J., Heath,P., Griffiths,G., Pelan,S., Grafham,D., Eichler,E.E., Weinstock,G., Mardis,E.R., Wilson,R.K., Howe,K., Flicek,P. and Hubbard,T. TITLE Modernizing reference genome assemblies JOURNAL PLoS Biol. 9 (7), e1001091 (2011) PUBMED 21750661 REFERENCE 3 (bases 1 to 54530079) CONSRTM Genome Reference Consortium TITLE Genome Reference Consortium reference assembly of the mouse genome JOURNAL Unpublished REFERENCE 4 (bases 1 to 54530079) CONSRTM Genome Reference Consortium TITLE Direct Submission JOURNAL Submitted (24-JUN-2020) NCBI, NIH, Bethesda, MD 20892, USA COMMENT On or before Jul 15, 2020 this sequence version replaced KV575242.1, GL456185.2. The DNA sequence is composed of genomic sequence, primarily finished clones that were sequenced as part of the Mouse Genome Project. PCR products and WGS shotgun sequence have been added where necessary to fill gaps or correct errors. All such additions are manually curated by GRC staff. For more information see: https://genomereference.org. FEATURES Location/Qualifiers source 1..54530079 /organism="Mus musculus" /mol_type="genomic DNA" /strain="C57BL/6J" /db_xref="taxon:10090" /chromosome="19" CONTIG join(FO082334.2:1..19289,complement(AC120557.12:1..167131), complement(AC163098.4:1..57334),AC109619.11:51326..65608, complement(AEKQ02183848.1:23078..23326),AC109619.11:65861..131584, AC140307.3:1..187731,AC129188.3:37790..175245, complement(AC163276.4:1..80791),complement(AC109225.14:1..153604), AC130693.15:52179..184943,complement(AC115715.12:1..71347), complement(AC122119.11:1..177806), complement(AC110913.13:1..182759),AC166748.3:26646..178257, complement(AC152426.10:1..80634),AC125136.4:34495..150261, AC025794.9:71615..223047,LXEJ02006816.1:37882..38082, AC025794.9:223249..242418,AC129217.3:12447..175796, complement(AC130819.4:1..196471),complement(AC133089.4:1..61726), complement(AC121967.3:1..159316),AC124564.4:19665..208375, AC124701.2:821..140801,complement(AC130207.3:1..108403), AC132253.5:26985..194083,AC134437.3:74199..171749, AC135670.3:68255..182582,AC132148.3:31753..191402, complement(AC124169.3:1..168228),complement(AC125093.4:1..107358), complement(AC132247.3:1..163210),complement(AC132402.3:1..166169), complement(AC148991.2:1..113140),complement(AC148321.7:1..133724), complement(AC134839.3:1..151679),complement(AC125406.4:1..168088), complement(AC165168.3:1..128615),complement(AC127289.4:1..77890), complement(AC126036.4:1..65681),AC126266.3:50164..205037, AC124464.3:60019..188587,AC131724.4:40373..225611, AC129773.4:22161..218771,complement(AC151730.5:1..130655), complement(AC129014.4:1..55971),AC150901.2:33908..220883, complement(AC135633.3:1..144019),AC121964.1:64245..143290, complement(AC163722.6:1..112640),AC165342.4:26247..187795, complement(AC131758.3:1..104897),AC157214.2:55285..207625, AC115121.5:110994..227154,AC125196.4:21725..196591, complement(AC129322.3:1..181616),AC140294.3:46724..190551, complement(AC124487.3:1..182174),complement(AC122202.4:1..199144), complement(AC125315.4:1..113562),AC130835.3:12265..170078, AC116999.2:34334..209671,AC132264.3:29926..125468, complement(AC149281.2:1..153397),AC130531.4:53979..202186, complement(AC104095.4:1..159703),AC151575.1:90329..200563, complement(AC132952.3:1..74091),complement(AC147229.5:1..92467), AC136453.3:5939..201474,AC102062.9:87939..253774, AC125202.3:35102..207191,complement(AC126031.2:1..204212), AC135377.3:42729..55621,AEKQ02049663.1:9274..9474, AC135377.3:55823..179745,AC125185.3:18609..168526, complement(AC128703.4:1..157954),complement(AC126674.3:1..123297), complement(AC147026.2:1..153823),AC147369.3:11235..184037, complement(AC126940.4:1..152341),complement(AC125203.3:1..175489), AC133509.2:48714..214658,AC157519.2:12783..215073, AC140053.4:150827..186595,complement(AC112144.4:1..111847), AC150276.2:84581..221528,complement(AC147474.2:1..166367), complement(AC134906.3:1..118967),AC140458.3:7..186016, complement(AC116594.4:1..107152),AC103645.6:99196..209224, complement(AC100263.9:1..149952),AC149219.4:118137..205546, complement(AC122250.4:1..168682),AC153014.4:13232..195382, AC148920.1:153392..224526,AC153131.5:118026..184864, complement(AC132360.4:1..74208),AC145590.3:34859..179063, AC158778.4:53609..167819,AC103382.18:60999..172647, complement(AC158775.9:1..107490),AC152162.9:3137..182365, complement(AC167167.3:1..50370),AC162458.4:18257..212469, AC102790.7:62999..242249,AC162612.2:54941..145561, AC106834.9:41748..177277,AC103947.20:89752..167694, complement(AC125083.3:1..172673),AC133649.2:9021..187971, complement(AC148016.3:1..143814),complement(AC129205.3:1..150610), complement(AC141636.4:1..114595),complement(AC140411.3:1..126536), AC132454.3:20190..225152,AC124513.3:18929..202236, AC164427.5:68055..216510,complement(AC123066.4:1..177545), AC132389.3:43898..165998,complement(AC121973.2:1..130133), complement(AC144941.7:1..136095),complement(AC131118.4:1..104345), AC124557.4:32991..178544,complement(AC132088.4:1..128652), AC134830.2:57859..155666,complement(AC148021.2:1..155221), AC140378.2:80276..194681,AC107685.7:127799..175566, complement(AC149224.7:1..144199),AC165089.5:59647..247216, complement(AC150898.2:1..113053),complement(AC151413.2:1..172424), complement(AC122460.4:1..89653),complement(AC123930.4:1..127805), complement(AC139711.4:1..215047),complement(AC132319.3:1..168211), complement(AC126944.3:1..121608),complement(AC132140.3:1..213369), AC124540.4:51156..199168,AC148009.3:94710..201209, AC119996.7:30263..122603,AC117629.16:1..248718, complement(AC117615.11:1..104594), complement(AC117809.6:96628..181289),AEKQ02109238.1:5449..5649, complement(AC117809.6:1..96426),complement(AC118249.11:1..115229), complement(AC118472.8:1..207146),complement(AC131231.10:1..149169), AC118724.18:31183..197860,AC119982.6:74470..177924, complement(AC124973.8:1..160338),AC113075.9:1..171837, complement(AC162365.6:1..35406),AC118005.9:29818..195212, complement(AC118628.11:1..200771), complement(AC115768.9:146225..162620),AEKQ02109329.1:20725..20925, complement(AC115768.9:1..146023),complement(AC118934.9:1..141191), AC116863.6:37407..171621,complement(AC116137.19:1..95981), complement(AC161521.16:1..167496),AC163993.3:7563..177411, complement(AC113961.14:1..171510),AC157914.4:69554..166967, complement(AC162456.3:1..113201),AC119228.10:53090..168362, complement(AC093339.17:1..142276),AC114578.14:30088..201229, complement(AC120159.9:1..136102),AC157785.2:50134..159030, AC111048.8:98849..118170,AEKQ02109434.1:6291..6491, AC111048.8:118372..232012,AC162613.2:103363..147306, AC157986.4:15219..207504,AC106833.10:58503..180887, complement(AC103405.14:1..223265), complement(AC102751.14:1..152749), complement(AC122548.10:1..178194), complement(AC110180.10:1..142285),AC119158.10:8677..209459, complement(AC103358.7:1..107389),AC157907.2:83546..153518, complement(AC108399.11:1..123726),complement(AC116507.9:1..134862), complement(AC125019.6:1..157216),AC117816.11:62318..168728, complement(AC113485.19:1..168733),AC158130.7:137309..206879, AC124323.10:68440..150803,complement(AC115752.8:1..157788), complement(AC102159.10:1..61233),complement(AC162887.5:1..174960), AC087098.8:72586..198338,complement(AC087871.9:1..110733), complement(AC125381.4:1..155208),complement(AC117183.3:1..153695), complement(AC160088.2:1..117628),AC122497.3:93930..139762, AC141640.3:38004..167363,complement(AC122846.4:1..184442), AC098875.3:28600..208764,AC102119.10:114161..218170, AC165239.3:67790..208461,AC102285.7:38334..174894, complement(AC157912.4:1..102036),AC102249.16:77362..212190, AC016791.23:31600..172942,complement(AC125259.8:1..88889), AC113244.19:33218..141893,AEKQ02162242.1:688..888, AC113244.19:142095..224351,complement(AC134331.2:1..132076), AC127415.3:40175..177302,complement(AC102038.9:1..140682), AC119801.14:52078..251756,complement(AC121552.15:1..140579), AC115781.9:62926..210190,AC133874.10:41812..215113, complement(AC119234.10:1..137302),AC120164.7:48982..164107, complement(AC117769.9:1..136485),complement(AC119947.14:1..119379), AC113514.9:20443..170366,AC116128.15:58487..228363, AC118931.8:47402..131963,AC113124.9:1..188397, complement(AC161238.7:1..170059),AC137605.3:33731..43861, AEKQ02162419.1:1..1783,complement(CAAA01166808.1:1..782), complement(AEKR01081015.1:1..3276),AEKQ02162420.1:2965..31279, AC137605.3:66969..180560,complement(AC101542.19:1..90216), complement(AC110212.12:90469..202956),AC109149.15:1..176668, AC115360.6:42487..217325,complement(AC101774.6:1..82634), complement(AC112153.4:1..135756),AC116871.6:25767..161959, complement(AC124632.11:34948..120345), complement(AC158905.4:1..171018),AC111023.12:94734..228107, complement(AC158131.4:1..21145),AC101775.10:6130..122426, AEKQ02162533.1:3953..4153,AC101775.10:122628..167945, AC100729.21:17615..167242,complement(AC120840.32:1..198120), complement(AC139233.10:1..190252), complement(AC117790.23:1..108866),AC157322.5:114975..201134, complement(AC121935.3:1..117149),AC148006.4:86810..209327, AC148014.3:14045..222061,AC170187.2:49897..192550, AC144949.5:90850..203311,complement(AC142101.4:1..186497), AC166063.4:42852..232698,complement(AC169520.2:1..29433), complement(AC117253.3:1..130528),AC126608.20:38019..62224, AC121873.3:1..209035,AC133099.3:29011..224638, complement(AC112271.4:1..166586),complement(AC132303.3:1..86255), complement(AC129182.4:1..108065),complement(AC145557.3:1..169369), AC140193.3:78579..173527,complement(AC133503.4:1..147533), complement(AL603804.18:1..149791),AC119236.8:124626..163348, complement(AC151978.3:1..63096),AC144792.3:58335..164766, complement(AC124552.3:1..182146),AC125458.3:31159..54503, complement(AEKQ02075935.1:16502..16702),AC125458.3:54705..184015, AC122312.3:17198..206657,AC126795.4:39105..183031, complement(AC124716.4:1..148275),AC140375.2:13965..198254, AC138790.2:19663..197765,complement(AC141888.4:1..150605), complement(AC132251.3:1..124719),AC124693.4:24093..160363, AC125101.3:21602..162162,AC123853.2:18905..205768, AC151478.1:6678..219132,complement(AC138457.3:121927..144610), complement(AEKQ02075777.1:693..893), complement(AC138457.3:1..121725),complement(AC131105.4:1..166848), AC132957.3:55606..246177,AC170878.4:64940..148454, AC123058.3:8466..194636,AC126454.3:8972..188518, complement(AC140332.3:1..111942),AC149086.4:74212..185283, AC131185.4:98607..208584,complement(AC150685.2:1..106183), AC140233.3:54535..195305,complement(AC101911.9:1..88731), AC114539.8:26479..249767,AC156982.8:23845..216311, complement(AC161865.4:1..178592),AC122442.4:129390..180516, complement(AC108814.22:1..156577),complement(AC124724.4:1..105813), complement(AC132288.5:1..145586),complement(AC132268.3:1..162225), AC125075.4:3324..188709,AC131719.5:40047..216902, complement(AC126679.2:1..166555),complement(AC127264.4:1..99201), complement(AC126046.3:1..167504),complement(AC140781.3:1..125134), complement(AC141870.4:1..139031),complement(AC127434.1:1..180125), AC122363.4:36328..180129,AC124192.4:9598..166455, complement(AC144945.4:1..148808),complement(AC093349.6:1..117378), AC125173.3:2147..62535,complement(AC107844.11:1..194040), complement(AC116451.7:1..214396),complement(AC121879.3:1..76744), complement(AC139553.5:1..91805),AC123941.3:85217..182733, AC131103.4:939..210370,AC101745.9:21594..174866, complement(AC158463.7:1..125431),complement(AC101735.8:1..100768), complement(AC122294.2:1..68145),AC100726.7:69429..130480, complement(AEKQ02075277.1:20975..21175),AC100726.7:130682..176074, complement(AC162444.2:1..141230),AC157911.5:50769..168559, AC101812.19:3234..169224,AC101728.10:45677..184577, AC101691.7:22034..175552,AC099591.7:20634..191578, complement(AC142249.6:1..184395),complement(AC122763.9:1..144318), AC157546.7:59457..133352,complement(AEKQ02075176.1:8737..8937), AC157546.7:133554..173513,AC163452.12:5711..185406, complement(AC136710.8:1..123332),AC129557.10:19623..174415, complement(AC138378.7:82465..119789),AC123646.8:1..189534, complement(AC154118.6:86942..103968), complement(AEKQ02075117.1:3450..3650), complement(AC154118.6:1..86740),AC163221.5:6386..188739, AC136730.9:124239..146616,complement(AC138174.9:1..175902), AC133451.14:33103..118076,complement(AEKQ02075083.1:31626..31826), AC133451.14:118278..184265,complement(AC123702.11:1..93475), AC137853.21:3505..173430,complement(AC121510.10:1..103059), AC117805.8:50466..156701,AC117612.9:49385..186038, complement(AC113491.18:1..154528),AC108836.23:44375..196065, AC158127.3:85506..217544,complement(AC111065.20:1..61964), AC108440.8:5368..177196,AC162372.5:33534..150210, complement(AC112967.14:1..167743),complement(AC171807.1:1..28469), AC110206.21:23029..199583,complement(AC133100.5:1..128667), AC130544.3:3252..166863,AC166100.2:138981..275852, complement(AC112962.15:1..89032),AC157916.2:93004..190666, complement(AC137148.14:1..113972), complement(AC118695.10:42309..181761), complement(AEKQ02074901.1:118..318), complement(AC118695.10:1..42107),AC161579.4:10090..188366, AC115771.13:60803..169181,complement(AEKQ02074871.1:7068..7268), AC115771.13:169383..209515,AC166746.7:18065..156084, AC116849.11:31563..168486,AC158549.8:51054..195500, AC125150.3:9743..154390,complement(AC161518.3:1..58189), complement(AC102655.7:1..144205),complement(AC167540.2:1..25178), AC131756.3:21842..175604,AC140413.3:46495..159523, complement(AEKQ02074804.1:3957..4157),AC140413.3:159725..202504, AC134591.4:46616..222814,AC147985.3:51516..170479, AC133576.10:56072..213096,AC140469.2:59845..180376, complement(AC109168.10:1..71228),AC102457.11:6566..147128, complement(AC102610.18:69979..217909),AC158904.4:1..219567, complement(AC102548.11:5538..76952),AC127545.4:27433..146015, complement(AC102604.13:1..163169),complement(AC124459.5:1..125849), AC107710.5:104228..188708,complement(AC139040.8:1..125394), AC098733.2:34240..214382,AC123621.10:44215..197720, complement(AC140471.2:1..124354),AC162855.6:107090..191900, complement(AC105061.16:1..171382),complement(AC157915.4:1..91769), complement(AC102553.8:1..104322),AC109616.9:70598..167801, complement(AC171175.1:1..4605),complement(AC170862.1:1..37617), complement(AC170185.3:35475..36652),AC167713.2:1..44867, AC108409.8:23329..270854,AC163019.5:32379..152969, complement(AC102432.9:1..181603),AC161413.5:131069..215356, complement(AC165327.4:1..122459),CR555305.5:22776..121111) //