LOCUS GL379960 491128 bp DNA linear CON 13-MAR-2015 DEFINITION Caenorhabditis brenneri unplaced genomic scaffold Scfld02_174, whole genome shotgun sequence. ACCESSION GL379960 ABEG02000000 VERSION GL379960.1 DBLINK BioProject: PRJNA20035 BioSample: SAMN02953693 KEYWORDS WGS. SOURCE Caenorhabditis brenneri ORGANISM Caenorhabditis brenneri Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 491128) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis brenneri Sequencing and Analysis Consortium TITLE Direct Submission JOURNAL Submitted (21-JUL-2010) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA REFERENCE 2 (bases 1 to 491128) CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (28-JUL-2011) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA REMARK Annotation update by submitter COMMENT The organism is Caenorhabditis brenneri Sudhaus & Kiontke, 2007; strain PB2801. This strain is derived from the wild isolate LKC28. It was inbred in Scott Baird's laboratory for 20 generations by transferring one gravid female per generation. The strain LKC28 was established from worms collected by Hernan Ruiz in 2003 from roots of Liriope (Convallariaceae) grown in a nursery in Costa Rica (Provinciade Alajuela) (Sudhaus & Kiontke 2007). LKC28 and three other strains of C. brenneri were described in Sudhaus & Kiontke, 2007. Annotation was added to the scaffolds in July 2011. ##Genome-Assembly-Data-START## Assembly Method :: PCAP v. 9/3/04 Assembly Name :: C_brenneri-6.0.1 Genome Coverage :: 9.5x Sequencing Technology :: ABI ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..491128 /organism="Caenorhabditis brenneri" /mol_type="genomic DNA" /submitter_seqid="Scfld02_174" /strain="PB2801" /db_xref="taxon:135651" /chromosome="Unknown" assembly_gap 505..1399 /estimated_length=895 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <2902..>3890 /locus_tag="CAEBREN_26066" /db_xref="WormBase:WBGene00164791" mRNA join(<2902..2999,3086..3242,3675..>3890) /locus_tag="CAEBREN_26066" /product="hypothetical protein" /db_xref="WormBase:CBN26066" /db_xref="WormBase:WBGene00164791" CDS join(2902..2999,3086..3242,3675..3890) /locus_tag="CAEBREN_26066" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38595.1" /db_xref="WormBase:CBN26066" /db_xref="WormBase:WBGene00164791" /translation="MRPISFINLQRVYYPQSIMLSDVTPRKMSQSPNWGVRPITEEFQ LTIVEEAHCLLSALYQALSNLIPVHLRGLFEDKCIEVNHPEVLLASPNRPPPQPFISS PYRASTRRDARNGGPIMQSFSPAPYAAAPRPQMSDACTQTFSTGDIEVLNVFYE" gene <5540..>6108 /locus_tag="CAEBREN_23583" /db_xref="WormBase:WBGene00162308" mRNA join(<5540..5794,5839..>6108) /locus_tag="CAEBREN_23583" /product="hypothetical protein" /db_xref="WormBase:CBN23583" /db_xref="WormBase:WBGene00162308" CDS join(5540..5794,5839..6108) /locus_tag="CAEBREN_23583" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38580.1" /db_xref="WormBase:CBN23583" /db_xref="WormBase:WBGene00162308" /translation="MIDPLDVTLLKPFADAFKALQRVSSTAGDNETNVGIFREIAISY FHTSQVVVILSLEPSLLMWFIHDFSPEASYLNAHVLLEMTMTMRERNYGSLEDLKSAL NDWKNHAYYRFNGNGRLMELHNEIGFAMMNYCTYGTVPHLGVFDNEYTKCLDIFGLGI EDSEDSKQFSSLEN" assembly_gap 8103..8112 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 9983..9992 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 12094..13508 /estimated_length=1415 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 14849..25934 /estimated_length=11086 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 27175..28684 /estimated_length=1510 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <34740..>36855 /locus_tag="CAEBREN_19026" /db_xref="WormBase:WBGene00157751" mRNA join(<34740..34871,35169..35279,35367..35473,35520..35743, 35793..36025,36072..36222,36269..>36855) /locus_tag="CAEBREN_19026" /product="hypothetical protein" /db_xref="WormBase:CBN19026" /db_xref="WormBase:WBGene00157751" CDS join(34740..34871,35169..35279,35367..35473,35520..35743, 35793..36025,36072..36222,36269..36855) /locus_tag="CAEBREN_19026" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38587.1" /db_xref="WormBase:CBN19026" /db_xref="WormBase:WBGene00157751" /translation="MRKVFILILLLLLKQGDAHGNCDAKNYRAVDNAPEDALIYGITQ DCQMFFIRPSQLHLLSTIRVDRRHSFCYANLVQLHVKSHDTLLLTFKQASNRICTLEV HIPALNMLFGDHLFRYSLLNSLPYASCSYSKDQTFQLEPDLSFMDPVYNDVIYFIDAL SSGKQWKVLQFLLKDTGNMNMMNNLTVSLQSKDSSANEFVVSLDNQRDKLYRRNRFDN LIYQQCAFEMMFRPKDSEVISFETPSRGYGTILNGQSVDGDVMVYVETDRTTDPPLTR LNMLSTSHPEHVSCVSSTSFSFDVGIIREATVQKLKTEPRPPFGTKVSPRPSSKASKL EDEMKQKMKDSTYSPTKKPIVTSTESPISTSSAATSLKPKGAYSPSKSFFSYEMGGSG PTTTTTSPIAEKMLVSNEIPVEEISKEEEEKAEEELNEIIKELKSDEEENGAVEDDEK DVGELKTREVNTTPDDGVDDATTPESSPSNETSSDAEAVRSSRLTMNFNAIIIPISIF LIKFLN" assembly_gap 37631..39925 /estimated_length=2295 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <42482..>44422 /locus_tag="CAEBREN_05916" /db_xref="WormBase:WBGene00144641" mRNA join(<42482..42553,42705..42765,43123..43245,43367..43749, 43798..44207,44257..>44422) /locus_tag="CAEBREN_05916" /product="hypothetical protein" /db_xref="WormBase:CBN05916" /db_xref="WormBase:WBGene00144641" CDS join(42482..42553,42705..42765,43123..43245,43367..43749, 43798..44207,44257..44422) /locus_tag="CAEBREN_05916" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR022628 (S-adenosylmethionine synthetase, N-terminal), IPR022631 (S-adenosylmethionine synthetase, conserved site), IPR022630 (S-adenosylmethionine synthetase, C-terminal), IPR002133 (S-adenosylmethionine synthetase), IPR022629 (S-adenosylmethionine synthetase, central domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38561.1" /db_xref="InterPro:IPR002133" /db_xref="InterPro:IPR022628" /db_xref="InterPro:IPR022629" /db_xref="InterPro:IPR022630" /db_xref="InterPro:IPR022631" /db_xref="WormBase:CBN05916" /db_xref="WormBase:WBGene00144641" /translation="MSQHKFLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC ETVTKTGMIMLCGEITSKAVVDYQVLVRNVVKKIGYDDSSKGFDYKTCNVLVALEQQS PEIAAGVHIDKSSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNHKLHELRRSGE LGWVRPDSKTQVTIEYASEGGATIPLRVHTVVISTQHSPDVSLEELRSELIEKVIKAV IPANLIDESTIYHLNPCGSFIVGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPT KVDRSAAYAARWVAKSLVKAGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALSEADLL TVVNDNFDLRPGMIIKDLDLKRPIYEPTAENGHFGHNEFPWEQPRQLKISADLLKKSK NGVKSSDNGIAH" gene complement(<44798..>46987) /locus_tag="CAEBREN_29190" /db_xref="WormBase:WBGene00191155" mRNA complement(join(<44798..44989,45036..45205,45254..45557, 45735..45829,46462..46586,46866..>46987)) /locus_tag="CAEBREN_29190" /product="hypothetical protein" /db_xref="WormBase:CBN29190" /db_xref="WormBase:WBGene00191155" CDS complement(join(44798..44989,45036..45205,45254..45557, 45735..45829,46462..46586,46866..46987)) /locus_tag="CAEBREN_29190" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38614.1" /db_xref="WormBase:CBN29190" /db_xref="WormBase:WBGene00191155" /translation="MHEAPEIDVRMRQRDWRTTEERRGLPTRRETQSQYVKHNYSSTN RRTELNGSLASSSPMTSSEEGGHSSDPWNTSSISSGKRDVISPPMYSSTPHHHNHQQI SSTHHQVTSPQPPITKTIEVKVERSEKVEQQVTEPQKAPSNQTTSSTSSRIQHHHHHV APNSNATYAQPIIRGQPSYGSRSSSIATSQMRCDQSEIDFSWVNEEEDKLKRESKRID SLPEFYFGMDPPPVVASDSEKENEEEKRRRRKSSVLEKTAAFEIEARRNDRKEPAFLS RSSHQLLTTSEIPPADYSPLSIHTKEMGGPAERRIYRIQKQQQQQQSSEDRRYRSSIA F" assembly_gap 49511..49520 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<52769..>53296) /locus_tag="CAEBREN_31441" /db_xref="WormBase:WBGene00193406" mRNA complement(<52769..>53296) /locus_tag="CAEBREN_31441" /product="hypothetical protein" /db_xref="WormBase:CBN31441" /db_xref="WormBase:WBGene00193406" CDS complement(52769..53296) /locus_tag="CAEBREN_31441" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38603.1" /db_xref="WormBase:CBN31441" /db_xref="WormBase:WBGene00193406" /translation="MGNRSSSHYPPPPHWMHQRTSYSTTTSPYPESKQRPIAPGAFAE PYMLHNPHHPQSKAQMRRSMISLNADSGYMGGPDSERLRQMRGSRMSLNQVDFEPAMM PPPPRILIPHDAKTLKKLEKMEKKHQKLMKKLGARGIPMLPVPPPPIHPMYSRAMSFD DLHRLAFCFSVSSIW" gene complement(<59261..>60013) /locus_tag="CAEBREN_10363" /db_xref="WormBase:WBGene00149088" mRNA complement(join(<59261..59384,59432..59598,59763..59896, 59944..>60013)) /locus_tag="CAEBREN_10363" /product="hypothetical protein" /db_xref="WormBase:CBN10363" /db_xref="WormBase:WBGene00149088" CDS complement(join(59261..59384,59432..59598,59763..59896, 59944..60013)) /locus_tag="CAEBREN_10363" /note="contains similarity to Interpro domain IPR020328 (Uncharacterised protein family T05H10.3)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38562.1" /db_xref="InterPro:IPR020328" /db_xref="WormBase:CBN10363" /db_xref="WormBase:WBGene00149088" /translation="MTRFLLLLLVLLPFSFGLESKHWQWRLITCKASDSPVQKKDASS CKVSLLETENDPNPRPAPFDPCFEEENDGKPRNYCNIVCPGADTAYLIKRIPQNHRSC FGHFTYKIEKRSPNFFIWRDAKCRSSSVEFLIRCEFLSARSTFRSDEDIFEEANRIAA DLRQ" gene complement(<61207..>63005) /locus_tag="CAEBREN_30131" /db_xref="WormBase:WBGene00192096" mRNA complement(join(<61207..61330,61394..61503,61552..61698, 61750..61859,61903..62008,62747..62884,62997..>63005)) /locus_tag="CAEBREN_30131" /product="hypothetical protein" /db_xref="WormBase:CBN30131" /db_xref="WormBase:WBGene00192096" CDS complement(join(61207..61330,61394..61503,61552..61698, 61750..61859,61903..62008,62747..62884,62997..63005)) /locus_tag="CAEBREN_30131" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38611.1" /db_xref="WormBase:CBN30131" /db_xref="WormBase:WBGene00192096" /translation="MDDKESIVKTRKYYPIVYGTLSFIGPFTILIFNKDFSRRVRLML LGQERSIADILSLFFYSVHRLAFLLIPDSLFNHPVLPIASVYYNGLYWAIIIRSNGVA LMTLHRFLSIVKPSLKITTFIQNAKPWKIWIFYWIPSLVFSFLFFSDSEIEFESSETM VLVMSSEIISKATQISFLYILFSCVFCIVSYRFIIRFIRKKSISVSKSQRREIRLAVQ VFLYFIAQLILLIYLFLLSITALDDNVKN" assembly_gap 63457..75419 /estimated_length=11963 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <77107..>78500 /locus_tag="CAEBREN_07918" /db_xref="WormBase:WBGene00146643" mRNA join(<77107..77268,77393..77797,77882..77991,78162..78273, 78324..>78500) /locus_tag="CAEBREN_07918" /product="hypothetical protein" /db_xref="WormBase:CBN07918" /db_xref="WormBase:WBGene00146643" CDS join(77107..77268,77393..77797,77882..77991,78162..78273, 78324..78500) /locus_tag="CAEBREN_07918" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019426 (7TM GPCR, serpentine receptor class v (Srv), Nematode), IPR000609 (7TM GPCR, serpentine receptor class g (Srg), Nematode)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38619.1" /db_xref="InterPro:IPR000609" /db_xref="InterPro:IPR019426" /db_xref="WormBase:CBN07918" /db_xref="WormBase:WBGene00146643" /translation="MVSIAGHFNWTHAVYFGLFAFIMPVYFLIFVCLLKLRTSDALFK TTFYAILLQHSLADIIAMALYAFQKISYILIPGFIYNNQAALASGKTPLPLISSTYLF SVFYNCFFWFIIIRSNGVALMTIHRYLIIVKSNSNFSLAIQQSRSFLVWTIYWIPAAF FDGILYSDSTVRFDSVENLKNVVKPETTLKSTIVCISFLSISCTVCVICYILIIKYIR EKSSSMTKSLQRELRLAFQVSFPFGAQLVLLCFMIFANLYAKTGNTEMMVYIRDFFPL ANGLLSFISPFTIILFNKDLTRRIRTMITGKKDPSPPRESIGSFS" gene complement(<78741..>81799) /locus_tag="CAEBREN_04299" /db_xref="WormBase:WBGene00143024" mRNA complement(join(<78741..78941,79181..79309,79410..79601, 79860..80021,80402..80737,80850..81140,81680..>81799)) /locus_tag="CAEBREN_04299" /product="hypothetical protein" /db_xref="WormBase:CBN04299" /db_xref="WormBase:WBGene00143024" CDS complement(join(78741..78941,79181..79309,79410..79601, 79860..80021,80402..80737,80850..81140,81680..81799)) /locus_tag="CAEBREN_04299" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38570.1" /db_xref="WormBase:CBN04299" /db_xref="WormBase:WBGene00143024" /translation="MKIVCIGAAPTALGAAYRLNELKNEGNEAAKDAEIVLLEQESIA GGLSCTVTDAKGFLWDMGGHITFNHNFPYYEKATQWAVDDWNKLARNCMVDMNYLYDK KGIHLVPYPAQFAVPLFPDEVKNRCLADLKERYENPQDGTTPDNFEEWVLQHFGPTIL STFFKPYTKKVWTVEPLKMSPNWVGTRVAKLPQEKLEELCSMDQTELANADFGWGPNS YFTFPKYGGTGNVWNSMAKKLPNEWFKFNNKVTGVNHKEKTIEVLEKGQIEPTKMSYD VLLNTAPIDQLVNNTQITAPLDIVHNKVFIVGVGLRKPMTSFLEKFTWLYFPDREVPF FRVTILSRYGEVTPDSDKYWSVMCECARPIDDPITEEEMVKKTLDGLVIKDMITREAI ESVYSITLPYGYPIPTPNRDRELARAHTELERHQIYSRGRFGGWKYESSNQDHCFIQG KEFIDRVILGEPEKLYKTGVPTIPRG" gene <83657..>87138 /locus_tag="CAEBREN_14124" /db_xref="WormBase:WBGene00152849" mRNA join(<83657..83934,84063..84160,84350..84554,84603..84687, 84745..84978,85032..85194,85241..85335,85398..85519, 86412..86495,87036..>87138) /locus_tag="CAEBREN_14124" /product="hypothetical protein" /db_xref="WormBase:CBN14124" /db_xref="WormBase:WBGene00152849" CDS join(83657..83934,84063..84160,84350..84554,84603..84687, 84745..84978,85032..85194,85241..85335,85398..85519, 86412..86495,87036..87138) /locus_tag="CAEBREN_14124" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38576.1" /db_xref="WormBase:CBN14124" /db_xref="WormBase:WBGene00152849" /translation="MMLFFCYFKDHFFTIIQFFCRSNRISETPRRFQFHIFRMSNPSY RFVNPEMKHHNSLLFPGHVLILIFFFIPKERLLNKKSFLRDDEDSMNRFNRCTIPLDK FVPLFIFLSVHSFSRRMFLAGEGTLPLSNCTPESPTTFLFAYSNDLNSHTVKSAAQNI VSKLQYYQSKYEFLGNIRFDVKNPGFPHYTSDIKEFTASVNSHLPDPNLKFSDDSVGS DVLNDFLSNTQSPICGATVFILLKRNPTTTRSVVSQLQKNNVFVRTVIFDQLLGGLDS LIMYNISSESNGLAVFTDLDYVDEAVDFCTNNILNEYLLYSFNPVVSRQGQIELPILH TPDYFEQTLSVFVDITVQNHPLTDNFLFLNLTFTDTHDNHQSIIIDSSLMQDFNGYFE ADVFLKNNQDFDVSLAYKYQSTTQEALEIRMSINQCNPPQRLYCEMYTSKTCISWIFS TSCSGLSSLLLMRVGWTSMEPFCCLLIFLKRKLFDDDD" gene complement(<87965..>88105) /locus_tag="CAEBREN_13818" /db_xref="WormBase:WBGene00152543" mRNA complement(join(<87965..88009,88058..>88105)) /locus_tag="CAEBREN_13818" /product="hypothetical protein" /db_xref="WormBase:CBN13818" /db_xref="WormBase:WBGene00152543" CDS complement(join(87965..88009,88058..88105)) /locus_tag="CAEBREN_13818" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38585.1" /db_xref="WormBase:CBN13818" /db_xref="WormBase:WBGene00152543" /translation="METFEIAVRLLLPELVSMILETVTTTEELD" gene complement(96957..97028) /locus_tag="CAEBREN_26741" /db_xref="WormBase:WBGene00187352" tRNA complement(96957..97028) /locus_tag="CAEBREN_26741" /product="tRNA-Gln" /db_xref="WormBase:CBN26741" /db_xref="WormBase:WBGene00187352" gene complement(<97311..>98227) /locus_tag="CAEBREN_31309" /db_xref="WormBase:WBGene00193274" mRNA complement(join(<97311..97553,97731..97865,97935..98084, 98153..>98227)) /locus_tag="CAEBREN_31309" /product="hypothetical protein" /db_xref="WormBase:CBN31309" /db_xref="WormBase:WBGene00193274" CDS complement(join(97311..97553,97731..97865,97935..98084, 98153..98227)) /locus_tag="CAEBREN_31309" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38608.1" /db_xref="WormBase:CBN31309" /db_xref="WormBase:WBGene00193274" /translation="MEDGRPVSPSPSIFSIYGDEPGPSVTCEQPVGAEADVYISSIPE KKLAEIKKFMDSTPREENQYFIWVKDSATNKITVISIKTLENHMKNDSRVRRVKWRHL SSERVSIYRYSLPAITYEKSKLCKECLCRHKKLCLLLVWLAFVLFLCLVVVLGSLSPD DRAHPFAHNQSKTIPPQSLLIAQQPPPHLATVLMNTSLVG" assembly_gap 100841..100850 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 102799..111105 /estimated_length=8307 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <116233..>118957 /locus_tag="CAEBREN_01781" /db_xref="WormBase:WBGene00140506" mRNA join(<116233..116321,116366..116539,116587..116698, 116823..116958,117328..117582,117662..117760, 117858..118038,118137..118223,118267..118586, 118632..>118957) /locus_tag="CAEBREN_01781" /product="hypothetical protein" /db_xref="WormBase:CBN01781" /db_xref="WormBase:WBGene00140506" CDS join(116233..116321,116366..116539,116587..116698, 116823..116958,117328..117582,117662..117760, 117858..118038,118137..118223,118267..118586, 118632..118957) /locus_tag="CAEBREN_01781" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001594 (Zinc finger, DHHC-type), IPR020683 (Ankyrin repeat-containing domain), IPR002110 (Ankyrin repeat)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38628.1" /db_xref="InterPro:IPR001594" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR020683" /db_xref="WormBase:CBN01781" /db_xref="WormBase:WBGene00140506" /translation="MTRRRALSTIEERTETTSGAISTSSNTNTSTTEMETKMQMAVRA CQIGEVQTVRFLLNGHVSADELDQEGCGLLHWAAINNKVDVMELLLSHHASIDMLGGN LRSTALHWACYNSQLAAVICLVKNGANPTIRNLNGETPLHIASNTGNLTIIAYLLVKF EHIKDMRDNLGHSALLSAAGQSFGLFPIRIFTKLDAYLDFTSDETGDTALHVSMQRQN LHGAIELICAGADETKRNKDGKTAFELVNKELEKQVREHVKTRKIREEGTTCEKMKTR WFFMQLFTASITGILLVGGVALYYLTNFWVVLSALIVCIPLTVFFLRKKRMDHFGYLP VTYICWMGMAELALLIFDSEGLIHWTLLMTMCTIWVISASFYWTLILTDPGVLPRSSN PFEDFIRQVEEKKVERFCFTCWIPKSSSAHHCAQCDKCMDGFDHHCPWIHKCVYRKNL RFFVLFCLTNFIFDVLYVPVLIYMIGISMSNVGFNQTLADHGIMVISFFFSIPHVIGA GGITYTQFSQISRHITTIEIIKNSREKKKSGSTTSSQEYNPWENKPSMRARIRNIWNL LAFDKFGVEEEDSQVELSFETSESQI" gene <129238..>130158 /locus_tag="CAEBREN_05604" /db_xref="WormBase:WBGene00144329" mRNA join(<129238..129321,129904..129999,130051..>130158) /locus_tag="CAEBREN_05604" /product="hypothetical protein" /db_xref="WormBase:CBN05604" /db_xref="WormBase:WBGene00144329" CDS join(129238..129321,129904..129999,130051..130158) /locus_tag="CAEBREN_05604" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38592.1" /db_xref="WormBase:CBN05604" /db_xref="WormBase:WBGene00144329" /translation="MNRSSEKKRICVYCGSSKPGMKWSPLRKGGKSHKAQEDKKLEDG SKSDSGPEFEDGEFEDHTYEIDKDVSSQEQSKFRNLQEDINSRIFGNGSNY" gene complement(<133238..>133930) /locus_tag="CAEBREN_17673" /db_xref="WormBase:WBGene00156398" mRNA complement(join(<133238..133420,133781..>133930)) /locus_tag="CAEBREN_17673" /product="hypothetical protein" /db_xref="WormBase:CBN17673" /db_xref="WormBase:WBGene00156398" CDS complement(join(133238..133420,133781..133930)) /locus_tag="CAEBREN_17673" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38598.1" /db_xref="WormBase:CBN17673" /db_xref="WormBase:WBGene00156398" /translation="MEQKSDEEKEIQQDFGYDYQKYGEQQAFMAAPFSEYNASFKDID DQTYIDKSTPWIEVKVSKVGSEFENANVLGMDILDYMYLSIIFDVRKKQVSIVDTEIK IEENSEDN" gene <134509..>135433 /locus_tag="CAEBREN_30456" /db_xref="WormBase:WBGene00192421" mRNA join(<134509..134565,134615..134737,134794..134937, 134969..>135433) /locus_tag="CAEBREN_30456" /product="hypothetical protein" /db_xref="WormBase:CBN30456" /db_xref="WormBase:WBGene00192421" CDS join(134509..134565,134615..134737,134794..134937, 134969..135433) /locus_tag="CAEBREN_30456" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38615.1" /db_xref="WormBase:CBN30456" /db_xref="WormBase:WBGene00192421" /translation="MNNIHRFIQKRFYLRTRHAHPFGIVLDIDGVLFKGRNMLPRVKE AFSLITDKKGNFVVPTVFLTNGTNSTEKLKAAQLSEQLGFKIPADHVLMSHSPLRMFT DLHDKQHWPKGSNILKKILLIRREFFRVGFKKVTTIDHLVKWFPHLDCTDFSRKIVDP KETEAARKRFRPIEAIVMLGEPLKWETSLQLMLDCVLTYGSEFYKLEEKGSLQENIFI RTQKTDQGFERSVVHPRSLSKKLLMIKTPKFLSLIFETTTSQMS" gene <136106..>137965 /locus_tag="CAEBREN_28357" /db_xref="WormBase:WBGene00190322" mRNA join(<136106..136321,137443..137528,137574..137770, 137811..>137965) /locus_tag="CAEBREN_28357" /product="hypothetical protein" /db_xref="WormBase:CBN28357" /db_xref="WormBase:WBGene00190322" CDS join(136106..136321,137443..137528,137574..137770, 137811..137965) /locus_tag="CAEBREN_28357" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38606.1" /db_xref="WormBase:CBN28357" /db_xref="WormBase:WBGene00190322" /translation="MDTMIFPLIAGGRRPDHIPIVACNVDLVWMADIASQLPRIGHGV FIHILDTLYEKLTGQHLQFRATLGKPTEVSYLHAAHRIQRQARAMKLDDVKYLYVIGD NPMSDVLGARLFDRYLRHGGVGRFDHLDLEAFDVNDGEKPRVVLEMLLKDAFRFLWRL VFIKVSQHVHMNGVVKPISALIDNLSKGEQLLLNQPNFVEYDLHAAIRTILRRECYR" assembly_gap 137037..137046 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<139296..>140545) /locus_tag="CAEBREN_08538" /db_xref="WormBase:WBGene00147263" mRNA complement(join(<139296..139502,139550..139668, 139716..139942,139995..140130,140184..140403, 140456..>140545)) /locus_tag="CAEBREN_08538" /product="hypothetical protein" /db_xref="WormBase:CBN08538" /db_xref="WormBase:WBGene00147263" CDS complement(join(139296..139502,139550..139668, 139716..139942,139995..140130,140184..140403, 140456..140545)) /locus_tag="CAEBREN_08538" /note="contains similarity to Pfam domain PF04678; contains similarity to Interpro domain IPR006769 (Coiled-coil domain containing protein 109, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38630.1" /db_xref="InterPro:IPR006769" /db_xref="PFAM:PF04678" /db_xref="WormBase:CBN08538" /db_xref="WormBase:WBGene00147263" /translation="MGNGRRLVTSFVAAQKLANLRNTLWNRQQLTFSSSVASSSSTPS SESLAIRFEYGLPLIDIPLPSRNELCQFTMRPLSDTVGSLCEFLRKEDRGIDYVAVYG TNGVKLATCTSIEHLLQFGTFRLRLNDKYFDVTVPKTGTASYDSSDKLRQLDDLRATV ASLHAALCVDEYKLSREKKLLLQLENAETLLAPLHEAKQQIERECEAHTDRVMWAGFA AMGVQTGLFARLTWWEYSWDIMEPVTYFATYSTVCATFGYYLYTKQSFEYPSARERVY TKQFYRRAQKQNFDIERYNRLVNEVEDLRNQLKRMRDPLFQHLPVSYLSNLETTEK" gene <143297..>145162 /locus_tag="CAEBREN_06119" /db_xref="WormBase:WBGene00144844" mRNA join(<143297..143366,143436..143661,143890..144097, 144146..144397,144445..144831,144878..145057, 145112..>145162) /locus_tag="CAEBREN_06119" /product="hypothetical protein" /db_xref="WormBase:CBN06119" /db_xref="WormBase:WBGene00144844" CDS join(143297..143366,143436..143661,143890..144097, 144146..144397,144445..144831,144878..145057, 145112..145162) /locus_tag="CAEBREN_06119" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001345 (Phosphoglycerate/bisphosphoglycerate mutase, active site), IPR003094 (Fructose-2,6-bisphosphatase), IPR013079 (6-phosphofructo-2-kinase), IPR013078 (Histidine phosphatase superfamily, clade-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38584.1" /db_xref="InterPro:IPR001345" /db_xref="InterPro:IPR003094" /db_xref="InterPro:IPR013078" /db_xref="InterPro:IPR013079" /db_xref="WormBase:CBN06119" /db_xref="WormBase:WBGene00144844" /translation="MEIPAGLETTKRKVAHSDEHGFSDQVRVPNVIVMVGLPARGKTY ISKKLCRYLKWTGFKTRVFNVGEYRREDANAADAIHGANASFFSPDNADALKVRTESA RRAMEDMAEYLNNGSGAVAIFDATNTTKDRRKTIIDFCKKKRLRCFFIESVCDDPAII DSNVTDVKVNSPDYKGLMTAEQAKEDFMNRIENYKKQYEPIEESEDETLSFIKVINAG RSFKVHQVRGHVQSRVVYFLMNIHLLPRSIFLTRHGQSEYNAMGRLGGDSPLTEEGQK YASALGEFFEEEQVPNLRVWCSQKVRAAQTASHLKPEMQTEYWKALDELDAGICEGLT YDDIQQRYPKQADDRATDKYHYRYPSGESYEDVVCRLEPVIMELERQANVLVVSHQAV LRCVLAYFYDRPLSELPFIDIPLHSLVKLTPRAYHCDSTIYAFDLETGEWSEKSAQLP LCDSPRD" gene complement(<145512..>147472) /locus_tag="CAEBREN_22618" /db_xref="WormBase:WBGene00161343" mRNA complement(join(<145512..145673,145718..145828, 145878..146025,146076..146232,146279..146646, 146708..146841,146888..>147472)) /locus_tag="CAEBREN_22618" /product="hypothetical protein" /db_xref="WormBase:CBN22618" /db_xref="WormBase:WBGene00161343" CDS complement(join(145512..145673,145718..145828, 145878..146025,146076..146232,146279..146646, 146708..146841,146888..147472)) /locus_tag="CAEBREN_22618" /note="contains similarity to Pfam domain PF00876; contains similarity to Interpro domain IPR000990 (Innexin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38565.1" /db_xref="InterPro:IPR000990" /db_xref="PFAM:PF00876" /db_xref="WormBase:CBN22618" /db_xref="WormBase:WBGene00161343" /translation="MFVFRVLNTVPYTNRAGAKDLVASVHSFLTSNLLVGLAVLISWK QFGGTPIECMVPLDFTSAWVQYSNNYCWAQPTYFVPFTEELVEQVVDASDVVADGITV AGRGAVPRYVKKGGEKISYYQWMSFFLLFEAACFRLPCFIWKYFASQSGMQVGEILRV ASDENNAVPLVKKANINALCIHLRGVLRFQKRLKLKKIVPHKILRFLNVKYSDYYVTF IYFVAKVAFFLNVILQSALLNKYMLPHDRQKNFGFDMWKTIFYGGSSRNETWRENGVF PRVTLCDFETRDMGNVQMHTVQCVLLLNLFTEKIFVILWAWYLFLGTFTICNLFSWLF AVFNDTYNEHFILNHLEMCETPFDKDDLKNREHVQRFISLYLGTDGLFLLQLIAQHAD VVFTTELTAALFKSYIEIEAQRKTLKQMNAVLPLLRPKDESQAESAMSTAPSTSHNQR RRGTEQMEKGVKARQGSISAQFRPFSSFEEPDAPTKKFDDSSSDEEPNSKKSSKKPSP TKKKDSKPQSPSHSRRPSLARALSPAFTQLQEIDSKLPKTSEKKHW" gene complement(<147626..>148099) /locus_tag="CAEBREN_06134" /db_xref="WormBase:WBGene00144859" mRNA complement(join(<147626..147808,147929..>148099)) /locus_tag="CAEBREN_06134" /product="hypothetical protein" /db_xref="WormBase:CBN06134" /db_xref="WormBase:WBGene00144859" CDS complement(join(147626..147808,147929..148099)) /locus_tag="CAEBREN_06134" /note="contains similarity to Interpro domain IPR004977 (Ribosomal protein S25)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38597.1" /db_xref="InterPro:IPR004977" /db_xref="WormBase:CBN06134" /db_xref="WormBase:WBGene00144859" /translation="MPPKKDPKGGKAPPAKKKEGSGGGKAKKKKWSKGKVRDKLNNMV LFDQATYDKLYKEVITYKLITPSVVSERLKVRASLAKAGLKELQAKGLVKCVVHHHGQ VVYTRATKEADVIVE" gene <152232..>152453 /locus_tag="CAEBREN_29808" /db_xref="WormBase:WBGene00191773" mRNA <152232..>152453 /locus_tag="CAEBREN_29808" /product="hypothetical protein" /db_xref="WormBase:CBN29808" /db_xref="WormBase:WBGene00191773" CDS 152232..152453 /locus_tag="CAEBREN_29808" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38613.1" /db_xref="WormBase:CBN29808" /db_xref="WormBase:WBGene00191773" /translation="MRRRPGNMHFCPSVSLQFSELFFWIRRRDGEEASVLHPTDEGSP PTASALRQAHLCLCLEEEEEEEEEDAYEL" assembly_gap 153882..153891 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 158028..158037 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 164565..164637 /locus_tag="CAEBREN_27678" /db_xref="WormBase:WBGene00188289" tRNA 164565..164637 /locus_tag="CAEBREN_27678" /product="tRNA-Lys" /db_xref="WormBase:CBN27678" /db_xref="WormBase:WBGene00188289" assembly_gap 166978..170946 /estimated_length=3969 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 180636..181565 /estimated_length=930 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <181659..>184367 /gene="Cbn-unc-44" /locus_tag="CAEBREN_12080" /db_xref="WormBase:WBGene00150805" mRNA join(<181659..181751,181853..183695,183746..184153, 184285..>184367) /gene="Cbn-unc-44" /locus_tag="CAEBREN_12080" /product="CBN-UNC-44 protein" /db_xref="WormBase:WBGene00150805" CDS join(181659..181751,181853..183695,183746..184153, 184285..184367) /gene="Cbn-unc-44" /locus_tag="CAEBREN_12080" /note="contains similarity to Pfam domain PF00531; contains similarity to Interpro domains IPR011029 (DEATH-like), IPR000906 (ZU5), IPR000488 (Death)" /codon_start=1 /product="CBN-UNC-44 protein" /protein_id="EGT38593.1" /db_xref="InterPro:IPR000488" /db_xref="InterPro:IPR000906" /db_xref="InterPro:IPR011029" /db_xref="PFAM:PF00531" /db_xref="WormBase:CBN12080" /db_xref="WormBase:WBGene00150805" /translation="MRGCRHSGVRIIVPPRKASQPIRVTCRYLRKDKLAHPPPLSEGE ELASRILEMAPAGAKFLGPVILEVPHFASLRDREREIVILRSDDGQHWKEHQLEATED AVQEVLNESFDAEDLAQLDDLQTPRITRILTSDFPMYFAVVTRVRQEVHCVGPEGGVI ISSVVPRVQAIFPDGSLTKTIKVSVQAQPVPQEMVTRLHGNRVAVSPIVTVEPRRRKF HKPITLCIPLPQSNNKGMLTQYSGQQGQEPPTLRLLCSITGGSAPAQWEDITGTTQLT FTGDEVSFTTTVSARFWLMDCQTPRDAARMAQEVYNEAISIPYMAKFAVFARRTFPVE GQLRVFCMTDDKEDKTLEKQEHFKLIAKSRDVEVLKGKHQFLEFSGNLVPITKSGDQL SLFFLPFQENRLAFMVKTRSKDDTEAATEGRLGFMAEPKIRSDALPPQQPICTLAISL PEYTGEIKPTPPPKKDSSPFEQRYGSALEKELPEFVHQNVLKGIGADWPRLGRALEVP HRDIQHIRHNYPGQECKNTLKIWIYLKKEDANQDNLDLALRQIGRDDIVRSIAYGEPE ALINYSQADSPSQKREPIRHFEDVPTATLVKREVRTEDLVTREPIQPTHHVEQSTTVV QEPSYSAPVHHSPVPEEPELEEEAPVAEMRTVVRTERHVHDTEEGPVVEERTITTTYE DDVAVNENIVDRTVPLNDEERKKYVLCFLNPLIFFGFRWEELNRLADESSPSPAQRSS AVAESTSEQVPEDVEQSVESESHREDDGTIVTTTVTTSHISESPLGSPTRSEEPEERR HSEHHDEGRA" gene <184678..>203651 /locus_tag="CAEBREN_30747" /db_xref="WormBase:WBGene00192712" mRNA join(<184678..185593,185731..185880,186420..186446, 187443..203155,203202..203432,203484..>203651) /locus_tag="CAEBREN_30747" /product="hypothetical protein" /db_xref="WormBase:CBN30747" /db_xref="WormBase:WBGene00192712" CDS join(184678..185593,185731..185880,186420..186446, 187443..203155,203202..203432,203484..203651) /locus_tag="CAEBREN_30747" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38602.1" /db_xref="WormBase:CBN30747" /db_xref="WormBase:WBGene00192712" /translation="MGARKTWGSAALETQVPRAPGAAHHLLADSLHLVFKLFKYFFFL FFYSFKMSSTANFIVSGVLADGTPIIFGAVPSDGTSHQAIHHVSSASHFQVESWDGEH AEHEHEHEEPRRFSIFLEEGGAEKTGLTQEVDDEEEPIASSKQFERTRSASLAAALLE LDPRGVPLVQFFKLATNEPLLEVDEGEDEVEPSEAERVLSQLLFTLRSLKMSGGETKH SEAVQRLRELEEELRAAGAVTPADPAVSEAVARALAVAGAGRDVQIRVNQSKHTTTTK TVYETETSGMAHMDIDQIRKLQQDIIADISSGAEQHSGQDSGTTQKKETAEEGFTNED GSVVVSKKMTRVVTTTRTTLPGEGEEPSAPDSPVESLGSVKDRIAKFEQFKTLPIDPS VSGPPPSVHSLPQETEEETETVQESIHTHEEIEQVSETQGRDSGRSDHSEQSIPEVQF TESDTEIEHHHGDEHHEESYLEPTVGIVITPHTPVPPEHPEDKEEYVEDEQPQEPLEP SEPEHVARAEIKDTREYSDEELAHELSPSEEHVSTAEIKDIKSYSPTSSDDERASQKG KVSPPIPQARHVISPSVASEVMSSHDDELAAHFVAESFEKQDEGSFEVMEQTPIYRGH HSPGQTSPIVSEHPLAQEYAESVTSHDEGDNLSLKSGHEVEIARHSVASVQEEEEEDN KPGLGDYAKKAGMIVGGVIAAPVALAAVGAKAAYDALKKDDEEDEEKPEGHEEKEVLT TQTTIMESPIQHEDIPAPHMEDVTPKVSHHEHPHEVVTETTTTVTREYYEQPEREASP ASSSHVESERPVSPLEKEPSHVVTETTTTVTREYEPEHEEGAASPTRSEEESERHFVT ETTTTTTLIKEYEQPEDSERLSEPAQSPEPVGTPADSEKYDPHVVETTTTTTVTREFY DDEDQPEPVHRETSPVESPIASERSIRSVQQQESPRHSPVPSEPISEKDAHHITETTT TTTVTREYYDEPQEVSHSPAPSSHQESEHAVPESPVISEKELPHVIETTTTTTTVTRE FEEEPEHEPEHHQEISHHVEAPATRDVFEEEYPRPESPAEVYPIPSEKEQEHHLVSET TTTTTVTREYYDEPEQHEGAAHPDQELYKPSESPAQGSPVPSEKDQEHHFVKETTTTT TVTREFHDDEYDRPESPLDVIHKTGSPAPSTETEHRELESPAVSEKEVPHVTERTTTT TVTREYFDNDYDKPEFHPSDTERQAPELPVTQQFHQESEYPAAQYSHEETHVSHQQQP ESGEESDGEGLGSKVLGFAKKAGMVAGGVVAAPVALAAVGAKAAYDALKKDDEEEGEE GEHRPLAESPVHEVRGHEEEEEEGHKDQPSHSPAPSADAESEHVVPDSPVVETTTTTS IQREYRNEEYQPSPDESPMEQQQPWATERTTTTTVTREFYDEPEEHHGETHSPAPSSH IESEHPVSKSPALSEKDYPTGVETTTTTTVTREYEQEPEAEHFEQRYDEPEFEERRSP SSAHSQEHLVKETTTTTTVTREFYDEPEHVQEHHEESFSPAPSSHVESEHQVPKSPAL SEVEHPHVVETTTTTTVTREFHDDEYDRPESPLDVIHKTGSPVPSSEHEVEHRDLESP TVSEREVPHVTETTTTTTVTREYYDDEDQYRQELPVEQAELEQEHRSPSPVRSEEGSV KHFITETTTTTTVTKEYEHPEDSERLSETAESQEHELVGTPAESEKSIPHIVETTTTT TVTSEFYQEEEPTHHEGSAVHQPFAQEQEGEYPVSPRASPVPSEKLEHDDVPLVKETT TTTTVTREYEQEPEAEHFEHRYDEPEFEERRSLSPAHSQEHLVKETTTTTTVTREFYD EPEHDQEHQEVSLSPARSSHVESEHQVPESPAVSEKELPHVTGTSLTQDSPAAQYFHE EPEYHTESPVQTEKTPLFTEQQQPESGEESDGEGFGSKVLGFAKKAGMVAGGVVAAPV ALAAVGAKAAYDALKKDDEEEDQDEQEALLGDVRERRAVDSPADIAATPEHLQKSPMS SEVHHVTETTTTTTVTREYFDEAESPVPSHEAHDQESVEGSQKSIPHVVETTTTTTVT RDFDEPSPAESPVPSEKEEPETTTTTREVFEAAEGDEPAHHFIETTTTTVKKDVFDEP EETLDDSEPKQEIPHVVETTTTTKTTREYDDEEEGSETGAPHVTETTTTTTVVREFYG ETPEDQEHPDEEESAPAQIEQDDVSSPGSESTTSVSRGVYPDEPHVVETTTTTTITRE YHDEPEESEDAEVKETTTTTTVTREYYEEEPESPIRKEQLEDDRTSPVESERSVPQEM EHDVVRDIHSELRQESPVGQQQEEQHRAASPTKSEEGSERHFISETTTTTTVTSEFEH PEHEFDSERLSEPTQSPEPVGTPAESEKSIPHVVETTTTTTVTREFYDDEEHPQPAAR DELSPVLSEQQFDQKQQRDSTIAERGSPVPSEKFEHDEAQLVKETTTSTTVTREYEQQ PEVEHFEQKYDEPEFEERRSPSPAHSQEHLVKETTTTTTVTREFYDEPEHVQEHQQES FSPSPSSHVESEKEVPESPAMSEKELPHVTRTSLTQDSPAAQYFHQEQEHYAESPVQT EKAPLLTEQQQPESGEESDGEGFGSKVLGFAKKAGMVAGGVVAAPVALAAVGAKAAYD ALKKDDEEEDQDEQEALLGDVREQRSAESPIKSEAHHQFEESEQRFQESPYEETTRHT METTITTVPQEFYEEPESPVKFQPAHAEDQESLKSPTVSEKEYHHNVAKVPSGDERDQ SAPASPVHSHKDDITQFQDEQSPESVEKYTEEEQKEEAQPEFQRQGSYSPGYSPKSPR GSLAESDEGSHQVIETVTSTVTEKHFKQEEQPQEEQKVESPVPSEEGSTRFIETTTTT TTVTREHFESEDEQEPHHVVESQRYDGESPIPSDEGSSRVVETTTTTTVTQGHFEPED EQDRVAKTSEYSPSGSPIPSEKSLERVVETTTTTAVTREYFEEEQAPSPVQSEEKFEG DRDHYSDEPAIAPYQQPTEYGRVDSHDAPASPAPSAESPIQRDVHGFEQERFDSERLS EPAQSPEPVATPAESEKSIPHVVETTTTTTVTSEFYDEEEQPEPARREESPVHSEQSE AKQQVPESPAEHVQEHQKESFSPAPTSHVESEHQAPESPAVSEKELPHVTRTSLTQDS PATQYFHEEQEHYTESPVQTEKAPLLTEQQQQPESGEESDGEGFGSKVLGFAKKAGMV AGGVVAAPVALAAVGAKAAYDALKKDDEEEDQDEQEALLGDVREQRSAGSPIKSEAYH QFEEPEQRFQESPYEVREQHDEPGEPRGLVSPVERRTLADQVSEEDTASEGPEPEYTS PVGSTSEQSQHYTEVVRKTTVTREYLDDDELQQPEGETRSRADSIKQTPESPSQEEPY VVETTTTVIRHYHDEPKTEEESEEKTLPEEVTVLREVYEAPEGDEPEHHYIETKTTTT ITKEVYAPTEAAAPGSPVHSEKDASETDFPIRDTLIGETHPGDTVTTTVTREYYQEPE GVRPASGSEADDESHAPRYMETTTTTTVTCEYEVSEDDEEESHPEDKQHQFREGSPVP SEESVSHVVEKITTTTVTEERYEPEEGHSDEDIPESTTTTTTTTTVTREHFEPEGEHL VESHEYQSESPVPSEQDSHRYIEKTTTTTTVTHEHVEPEEDQEHLPIVESQVYSPSGS PTPSEKLEGHFIETTTTTTVTREHVHQEDDGSFTPGEHTKHHESDQPESKSPVPSEGE THDFIKTTTTTTTVTREHFEAEDEHPSEGHAAEIPSDDESGHVIETTTTTTVTKEHFE PEDHPEQHHVVESQECSPSGSPVPSEKSTGHVVETTTTTTALTREHFEPEEKEQARTI QDSPAAQYFHEEQEYHTESPVQTEKAPLLTEQQQPDSGEESDGEGFGSKVLGFAKKAG MVAGGVVAAPVALAAVGAKAAYDALKKDDEEEDQDEQEALLEDVRERRALDSPVDYSK TQQHAATFYEPEEEDKVVVPESKEEEPKIVFPVDTPADQYVKEKEAFESMVQAEGPYI IESEEYEATEHQEPRISSPVHSDSGDIQPIPQQEQEIVEEETPRPAETSEADAPYIID SEEYEFTDREEPRISSPAHSDEEERQEAGMVGIGDYDAQQQNVEEEEDPNVVESEEYT GSGQGSPRPFEDFTTTTVLSVHHEPPAIPEPEVDEEEFEQDRSVIESGEYSQESPLPP TSVTSVEHVEPSEEHEHTATSPTTVTTVTSEHFEQEKDPYVVESEEYTRASPIGHERP ESPSGSPTHDDSHVIESQEYSGSPVPSEDSVRHVVEKVTTVTTNEEHFEPEDSSEDVY DHVKTTTTTTTVTREHFEPEEEEHVVESREYESGSPVPSEKESSQVIETVTTTTVVRE HFEPEDDQEEPHIVESQEYSPTGSPAPSDKHEPHLVETTTTTFETRERVEPEEERAPS PADSQRQPEIHSPVPSEEDVHGYIKTTTTTTTVTREHFEPEEEHVVESEKYPSGSPVP SEEDSNRGYETTTTTTVTREEHFEPEEEQHHIVESREYSPSGSPVPSEKSVGHVIETT TTTTVTREHVEPEQEYFHSESGRQSPVSSEKSAQRVIETSTLTTETRERFEPEEERQV SPLPSEEEVHGFVKTTSATTTESHVEPEHFQKEQESGEESDGEGFGSKVLGFAKKAGM VAGGVVAAPVALAAVGAKAAYDALKKDDEEEVEPVHYESADLQKPAPTIETHQEKDDS ESEGSFVDHGEESQHLPLQSTEAAFKLSTEDVAEQTAEKLVSEVFSPLDRTLKESEEY RASMESLNRRSPVESKRSVEDLASEALQNVTKISFGHADDSDDKHDDHDEEWKVYDRH GEILEEFSTQLTDDVIQEAEGDATTQIMMTQAEYSPRRSKFLKQESCQEISNEPEVDY YSDLQEKLNILAGEKNNLHALVEEEPSSSASDQLDVIHESDQEAHLEQEHQKEADAQK EQEEKEEAAEYTATHLVDDILQQVVHEINEEDDDQKTMTSDAYLTATEKDDQEYDTCV TSQDDTYESAQGWTSQDSEYTTATSQAPSRLSDSDGEHTARDRDQERQETSTPQAILS PVDSDRHFTVQQDFDMPVIRAFDPDDFMQNTARSTPDVALQVTIEEEDESDDKLPISP SGILLPPSHDPGRPISPVPPRKSDGTMQKEGDHFVFVREEDTIAEPTPPPQPAEFVEE VRKTPEAEEEETRITRENVPQEEEETEMRRQETERIHSLAMEASSDLGNSESSRYSRQ LSDLSSSAESHADTVIRVESERSGSSDSLEVVSVISAGKDVRTSEKSLTPEDQEKPLE AEKAQEEKEHPEEHHERPEQEAEDLGFEVYDADTEEQQQPVEELETVEEEPEDSDSLN EGGNHSSGHSSVGVPADTLAMIGKYRHQSSDNLSLTSLQEFERLEKEVGARGDGSLTR SEIELLVAGRLNRSGEGSVSSLAEFERLEKEMTENQSPPEDVMMLSDIREESEAEDMS IRDDDEEDVVGSDTELKSRPVQEEDLRVITPVAPSPTDSLEHAVDPIQMQYLETSTDS LEPTFQEIEVEQRPESVEDTSLTEYEMVPRVMEASTTDSLDGTATIERDSVLEGASQG IESTQSTHGLLSGDTMGTVVTDDDRDSLDGEVSSMLQSYPTTLTTFQTTVVGPDGSLQ TISRRVETRVTDPLISHVTFTGTESQERLDQLPDDEQFETVDTEGNVTRTTFHREHDQ QPHPHF" gene <208787..>210366 /locus_tag="CAEBREN_08152" /db_xref="WormBase:WBGene00146877" mRNA join(<208787..208866,208913..209113,209365..209569, 209672..209746,209797..209892,210271..>210366) /locus_tag="CAEBREN_08152" /product="hypothetical protein" /db_xref="WormBase:CBN08152" /db_xref="WormBase:WBGene00146877" CDS join(208787..208866,208913..209113,209365..209569, 209672..209746,209797..209892,210271..210366) /locus_tag="CAEBREN_08152" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38582.1" /db_xref="WormBase:CBN08152" /db_xref="WormBase:WBGene00146877" /translation="MSTIAAGRFAKDDVDAETKWWKEYPSKYYVERARPQNFYDEYIT NTWSKPKRLARSASFTNLTYIKDKDMDYPIHKSDSVSTLAPSLALPQYCREAQRIVHT VPVYKPHVYDWYNKSYSDARWRDTHREVAKPYKPLDTYISPASSHVPYYTFQTKRIFF DEKARQLAPYLKESQRYMDRYVSSRLKADDFANRFAYTAYEWRKPQDHAFNREFMTTQ RVFVSTPTGLPHEHYDKLALRRLYKRTGRFFF" gene <210721..>211986 /locus_tag="CAEBREN_16101" /db_xref="WormBase:WBGene00154826" mRNA join(<210721..210783,210910..211025,211884..>211986) /locus_tag="CAEBREN_16101" /product="hypothetical protein" /db_xref="WormBase:CBN16101" /db_xref="WormBase:WBGene00154826" CDS join(210721..210783,210910..211025,211884..211986) /locus_tag="CAEBREN_16101" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38575.1" /db_xref="WormBase:CBN16101" /db_xref="WormBase:WBGene00154826" /translation="MFGPFCTGIFLFLALWGTVFMAVLGGLFYNQSVGLFEDLPSESK NMETKPWKDRVNNWNSLYQQNAYNCWIACGVYVGIAVLLSLRACCLAKR" gene complement(<212437..>221286) /gene="Cbn-pqn-22" /locus_tag="CAEBREN_16754" /db_xref="WormBase:WBGene00155479" mRNA complement(join(<212437..212646,213352..213597, 213692..213850,213895..214065,214113..214199, 214271..214384,215353..215687,217173..217257, 217459..217563,218206..218295,218535..218645, 219165..219446,219554..220174,220270..220381, 221234..>221286)) /gene="Cbn-pqn-22" /locus_tag="CAEBREN_16754" /product="CBN-PQN-22 protein" /db_xref="WormBase:WBGene00155479" CDS complement(join(212437..212646,213352..213597, 213692..213850,213895..214065,214113..214199, 214271..214384,215353..215687,217173..217257, 217459..217563,218206..218295,218535..218645, 219165..219446,219554..220174,220270..220381, 221234..221286)) /gene="Cbn-pqn-22" /locus_tag="CAEBREN_16754" /note="contains similarity to Interpro domain IPR006643 (ZASP)" /codon_start=1 /product="CBN-PQN-22 protein" /protein_id="EGT38589.1" /db_xref="InterPro:IPR006643" /db_xref="WormBase:CBN16754" /db_xref="WormBase:WBGene00155479" /translation="MPQTVHLQYNSPMGLYSKEAAVEQFQQQIGETPQDLPAQDKHFD PSKSATLKYLKEGERENFGENFFEKVAQAEAPRVPHQSEPTWARTAREKSERARSKTP ADPHQAYRPASSPAPSNHPIHAETAREHAEKSRVFTHNINEPFGRSYWEASHTLPRYR RSHSAGQDLANRGYELGGMDYTGGIHVDHGTDYQYYEEPQRKPQPPKLPPGYELGGTD FYRGHVSGDANYRGHGPDPPRLRPKYTADSHDPCNVAIAPNLEAVDANLLVGDTLSNQ KIRHEVRHIDQTKFGTSFGPTQGFTHDHHTAPRYAEPPKPVVYSLSANKSLARSASVP RSSAPPEQRDVWNVQQAEVDKETYITEPNWRRNVDQRRLAWERRAFETEQRLSRPYSE KVAPGVPPSWHAEAQHKHQQWQQQADNMNTQSYTYSTTGYQPSQPAGGQQSYNETRQY SSNTTSNYQPSQTQYQQQQHQYQSDQHSNAQRLLNSGYNRNQVDYVLSHKDKYNEGPH YQPPIINSSATAANNSSSSSHQYHSSSQAIPLGGPNQGHSSSSYTTETRVVGGGAPVS NSYSNQNNYSSSAYNSSSTQQQTKTIPVQNYQSSNYNKSYSSQTTTQHQPAPVAANNN YSTSYHTERSSTTTNQQPQVIALPPPQTNSSSYHTETHSSTGPIMMHSPGGHSMKSTE FSSSRHHKQETTTTTTTTPQPVFHTTTLPLTKTTSYNYSSSTVPSQPAKPSFNQESYT SHTERNSSSQGFPQQRLQPSGGYSYENYSSSRKEESRREETSRPVSQLSQYSESRNYK RNYEEKTETTTTPALAPATHVTYKDLSNAQSVDDVFNKKTEMNESLPVGSVFNTHNNT EGGYRDANGHDVSYKRETQTSADPGRETALLKEEEKRVVETPLEPGVISRHVTTKYYK KKTVTDTTTTTA" assembly_gap 216449..216458 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<222170..>222596) /locus_tag="CAEBREN_28410" /db_xref="WormBase:WBGene00190375" mRNA complement(join(<222170..222196,222414..>222596)) /locus_tag="CAEBREN_28410" /product="hypothetical protein" /db_xref="WormBase:CBN28410" /db_xref="WormBase:WBGene00190375" CDS complement(join(222170..222196,222414..222596)) /locus_tag="CAEBREN_28410" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38605.1" /db_xref="WormBase:CBN28410" /db_xref="WormBase:WBGene00190375" /translation="MTEVGGVYVPPAIAPLFSMPQSTIDDIQNTTSPTSIRSQPFSYS KPTPGGPKLHHRIKCPRTIFDATQN" assembly_gap 230588..231179 /estimated_length=592 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 232195..232204 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 233847..235947 /estimated_length=2101 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 237117..239569 /estimated_length=2453 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <254319..>256233 /locus_tag="CAEBREN_31203" /db_xref="WormBase:WBGene00193168" mRNA join(<254319..254393,255959..256066,256192..>256233) /locus_tag="CAEBREN_31203" /product="hypothetical protein" /db_xref="WormBase:CBN31203" /db_xref="WormBase:WBGene00193168" CDS join(254319..254393,255959..256066,256192..256233) /locus_tag="CAEBREN_31203" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38610.1" /db_xref="WormBase:CBN31203" /db_xref="WormBase:WBGene00193168" /translation="MFKFSDEGAERIPLCEQHSPLALYEQDYDTQGQKIGTMLRKLSV YNATEATSVEADEKPKALPISGLANALDFF" gene <257279..>262124 /gene="Cbn-kcc-2" /locus_tag="CAEBREN_21629" /db_xref="WormBase:WBGene00160354" mRNA join(<257279..257428,257937..258476,258579..258927, 259026..259377,259563..260145,260505..260710, 260890..261082,261133..261297,261346..261480, 261696..261879,262033..>262124) /gene="Cbn-kcc-2" /locus_tag="CAEBREN_21629" /product="CBN-KCC-2 protein" /db_xref="WormBase:WBGene00160354" CDS join(257279..257428,257937..258476,258579..258927, 259026..259377,259563..260145,260505..260710, 260890..261082,261133..261297,261346..261480, 261696..261879,262033..262124) /gene="Cbn-kcc-2" /locus_tag="CAEBREN_21629" /note="contains similarity to Pfam domain PF00324; contains similarity to Interpro domain IPR004841 (Amino acid permease domain)" /codon_start=1 /product="CBN-KCC-2 protein" /protein_id="EGT38596.1" /db_xref="InterPro:IPR004841" /db_xref="PFAM:PF00324" /db_xref="WormBase:CBN21629" /db_xref="WormBase:WBGene00160354" /translation="MGTIMGVFLPCLQNIFGVLFFIRLAWIIGTAGVFQAFFVVLTCV SVVSLTTFLTSISLSAIATNGVVPSGGPYYMISRNLGPELGGAVGILFYLGTTIAASM YITGAIEILLLYIYPQAKLFDDIYHNYRVLGTILLLILGLIVMAGVKFVNRCALPLVI VVIFCILSAILGVFVRYDGSDSLKFCMVGDRPVDLTSYYEKTKILPNCTTDGLHDLFC STNGTCDHYYDRMKDIKVWKASGMPAIREERAIKGIASGVFFDNLWPKYLRAGEVLSK DRKDKGDINRGGHPSYIYAESVTNFMILVGVFFPSATGIMAGSNRSGNLRDAAKSIPL GTLAAQNFSSFIYLIGVVLFGASVSEMFIRDKYGRSAMGKLIISEISWPFPQVILFGC FMSTAGAGMQSLTGAPRLLQAIAADDVLPFLKPFRKMDSRGEPIRAILLTLAICECGI LIAVIENITALITQFFLMCYLGVNAACALQSLLKSPGWRPGFKYFHWSLSMIGAILCV AVMFISAWHFALFAIFIGAGVYKYIEYAGAEKEWGDGLRGLGLSAARFALLNLDDKPQ HSRNWRPQLLVLAPDVESPNTHGILSFVSQLKAGKGLTLVAHCMEGEYAENYLKAQAV QEKLKAIVKKNKIKGFCDVLVTSNVIEGISCLVQTSGLGGMRHNTVVLSWPDDWRSEQ DWVVANKFVSAIRAISAAKCAIMVPKYAEKFPANGTKVSGFIDVWWVVHDGGLLMLLP FLLRQHKTWKNTTVRLFAIAQMEDNNVQMKTDLEKFLYHLRIDAAVNVIEMTDSDISD YTYERTMKMEERNQYLKNLNKSDREKDIQNHLEIVTRERKLSRINEEAPAVIPEQRNL EVVDEEHEESPKNENGPEKIEHKGVRFSDDEDSKEVKIGNGTLERDREERQRKRRYNV HKMHTAVKLNELMRQKSSDAQLVFVNLPGPPDADSDSYYMDFIDALTEGLDRVLLVRG TGAEVVTIYS" gene complement(<262865..>267299) /locus_tag="CAEBREN_31155" /db_xref="WormBase:WBGene00193120" mRNA complement(join(<262865..263024,263161..263369, 263417..263639,263805..264034,264078..264340, 264443..264575,264721..264894,265003..265156, 265592..265728,266122..266344,266453..266682, 266728..266990,267179..>267299)) /locus_tag="CAEBREN_31155" /product="hypothetical protein" /db_xref="WormBase:CBN31155" /db_xref="WormBase:WBGene00193120" CDS complement(join(262865..263024,263161..263369, 263417..263639,263805..264034,264078..264340, 264443..264575,264721..264894,265003..265156, 265592..265728,266122..266344,266453..266682, 266728..266990,267179..267299)) /locus_tag="CAEBREN_31155" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase), IPR007235 (Glycosyl transferase, family 28, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38616.1" /db_xref="InterPro:IPR002213" /db_xref="InterPro:IPR007235" /db_xref="WormBase:CBN31155" /db_xref="WormBase:WBGene00193120" /translation="MSSLFSSHCRNVMSKRKLIKELKNEMFDLAITEPFDACAYALFE AISIRAHVAVYSCIRLDHVSEIIGQPVPLSYVPGMQSSFGEKMNIWERYMNYFQFKGS SFIFQTIGDKGYEAAKEFYPNIRSWREVVPEASFIFTNSIPYLDFPSPTFDKMIPIGG FTVKTDKKSLVLEEKWSKILNQRRTNVLISFGTNARSVEMPEEYKKSLLEVFKSMPNT TFIWKYENPEDPFIKDIENVYLSSWLPQNELLADPRLTVFITHGGLASVMELAMMGKP AVMTYGILKTDNSKVFSYKKNAERLAEILHNQPTKPLETLVKYVEFAARMDKLVLFTI LLLFPIKSESFKILVYTNLFGHSHVKALGKVADALTDAGHNVTVLMPIMERRFINETC LKSTKNVIFIEQDDHSKQLIEKWSNRSSVWTSGGITPLNVFKKATVISNLFGAHCKNV MSQTKLIEELKTEYFDLAITEPFDTCAYAFLEAISIRAHVAVYSCSRLDHVSEIIGQP VPPSYVSGMYSPYGERMNIWERLENYFVFKARSYMFQAIGDRNYEEARKFYPGIRSWR EVLPEASFIFTNSIPYLDFPSPTFDKIIPIGGYTVKIEKKFLKLDEKWNEILDKRKTN VLISFGTNAKSDEMPEKYKKSLLEVFKSMPNTTFIWKYENPEDPFIKDIENVYLSSWL PQNELLADHRLTAFITHGGLASVMELAMMGKPAITIPVAADQTRNAEMLRRHGGSIHL RKFDLANSDLVKGAIEKVVNDKRRVFFSLKQFPRHEFFQALPCHTNNYKKNAERLAEI LENQPTKPLETLVKHVEFAARSVGITDNRLKCFDSDSENYR" gene complement(<269456..>271409) /locus_tag="CAEBREN_29775" /db_xref="WormBase:WBGene00191740" mRNA complement(join(<269456..269657,269703..269935, 270040..270755,270805..270937,270986..271156, 271260..>271409)) /locus_tag="CAEBREN_29775" /product="hypothetical protein" /db_xref="WormBase:CBN29775" /db_xref="WormBase:WBGene00191740" CDS complement(join(269456..269657,269703..269935, 270040..270755,270805..270937,270986..271156, 271260..271409)) /locus_tag="CAEBREN_29775" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase), IPR007235 (Glycosyl transferase, family 28, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38609.1" /db_xref="InterPro:IPR002213" /db_xref="InterPro:IPR007235" /db_xref="WormBase:CBN29775" /db_xref="WormBase:WBGene00191740" /translation="MRLLSVLCLLAAIYSVNSYKILFYTNLFGHSHVKFLGAAADTLT DAGHNVTVLIPVFDATLKTSLKTTKNTIVIEPHEDVDNFIKARSTMLSTMWLADNTNP LTMIKRIGTMSKIFSSQCEKVLRNTELIEKLRAENYDLAVTEPFDSCAYPFFEAINIR AHVAVLSSSRLDHVSDVIGQPAAPSYNPGLLSNNGDRMTIGQRFMNVIQYVCGSYFFS YVGDVEAAMAKEINSTWRTWRETVPEASFILTNQIPLLDFPAPTFDKIVPVGGLSVIT DKKAMKLEEKWSKILDFRKKNVFISFGSNARSVDMPQEYKNTFLQVIKSMPDTTFIWK YENTSDKFTEGIKNVYLGDWLPQNELLADPRLNVFITHGGLGSVTELSMMGTPAVMIP LFADQSRNAQMLKRHGGAAVLKKTDLSDPKLVQETIEKVLKDPEYKRNAVRLAEMLNS QPTNPKETLVKYVEFAARFGKLPSLDNYGRHQSFIQYFFLDIIAIIASVSLVSMYISY RVLRWSVRKCFGSRCSKSEEEKSKKE" gene <272334..>273036 /locus_tag="CAEBREN_02741" /db_xref="WormBase:WBGene00141466" mRNA join(<272334..272474,272524..272646,272692..>273036) /locus_tag="CAEBREN_02741" /product="hypothetical protein" /db_xref="WormBase:CBN02741" /db_xref="WormBase:WBGene00141466" CDS join(272334..272474,272524..272646,272692..273036) /locus_tag="CAEBREN_02741" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38618.1" /db_xref="WormBase:CBN02741" /db_xref="WormBase:WBGene00141466" /translation="MKFLVLFCLFATVAALSRPFNIPKTSKGPYKRPIIGGPATKDPK QYENKVWQYVYNVNERNSVLERRKAQEVGNMNAIPEPNTLIPVQVISAVVTLTQGYST VIEVEFAEATCAKNNAADLEISAANCKLLPNGKHSVWNVYDLFRAFKKHEIEVSKVRD VQQEDEPTSTQSTNRGYTVSDDTEPIIGKRNARDLKNVYEWH" gene <274044..>274669 /locus_tag="CAEBREN_16201" /db_xref="WormBase:WBGene00154926" mRNA join(<274044..274163,274325..>274669) /locus_tag="CAEBREN_16201" /product="hypothetical protein" /db_xref="WormBase:CBN16201" /db_xref="WormBase:WBGene00154926" CDS join(274044..274163,274325..274669) /locus_tag="CAEBREN_16201" /note="contains similarity to Pfam domain PF00031; contains similarity to Interpro domain IPR000010 (Proteinase inhibitor I25, cystatin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38620.1" /db_xref="InterPro:IPR000010" /db_xref="PFAM:PF00031" /db_xref="WormBase:CBN16201" /db_xref="WormBase:WBGene00154926" /translation="MKFLALFCLFATAAASGKPVRPGSDKPYFGAISKNPKEYEVVSV KTQSVAGLLTTLDVIFQESTCDTNKNLKEITAENCPVKSNGQRSVWRVTDHHKPWLKQ HIIGASKIEDLQPENEPTSTQSTNRGYTISDDTEPTNGIRNARDLKNVYEWH" gene complement(<274737..>275247) /locus_tag="CAEBREN_18931" /db_xref="WormBase:WBGene00157656" mRNA complement(join(<274737..274976,275025..275096, 275146..>275247)) /locus_tag="CAEBREN_18931" /product="hypothetical protein" /db_xref="WormBase:CBN18931" /db_xref="WormBase:WBGene00157656" CDS complement(join(274737..274976,275025..275096, 275146..275247)) /locus_tag="CAEBREN_18931" /note="contains similarity to Pfam domain PF00031; contains similarity to Interpro domains IPR000010 (Proteinase inhibitor I25, cystatin), IPR020381 (Proteinase inhibitor I25, cystatin, conserved region)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38586.1" /db_xref="InterPro:IPR000010" /db_xref="InterPro:IPR020381" /db_xref="PFAM:PF00031" /db_xref="WormBase:CBN18931" /db_xref="WormBase:WBGene00157656" /translation="MQSIFLVALILAVLSGINGQLAGGFSDLKPAEYTKTAWKSVPQI NSKINGDTLLVPVKVVKAQVQVVAGTNTVLEVLVSESTCSKGVAATQVNADKCKLKSG GKRALYKVSIWEKSWENFEQITAEKIRDVAANEKI" gene complement(<275737..>276198) /locus_tag="CAEBREN_17660" /db_xref="WormBase:WBGene00156385" mRNA complement(join(<275737..276048,276097..>276198)) /locus_tag="CAEBREN_17660" /product="hypothetical protein" /db_xref="WormBase:CBN17660" /db_xref="WormBase:WBGene00156385" CDS complement(join(275737..276048,276097..276198)) /locus_tag="CAEBREN_17660" /note="contains similarity to Pfam domain PF00031; contains similarity to Interpro domains IPR000010 (Proteinase inhibitor I25, cystatin), IPR020381 (Proteinase inhibitor I25, cystatin, conserved region)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38581.1" /db_xref="InterPro:IPR000010" /db_xref="InterPro:IPR020381" /db_xref="PFAM:PF00031" /db_xref="WormBase:CBN17660" /db_xref="WormBase:WBGene00156385" /translation="MKFFILVASIFTVMTEINGQLAGGLSDVNPAEYTKTAWKSVPQI NSENNGDSLLVPVKVVKAQVQVVAGTNTVLEVLVSESTCSKGVAATQVSSENCQLKSG GQRSLYKVSIWEKPWENFEQITAEKIRDVSPSEQF" gene complement(<292983..>293579) /locus_tag="CAEBREN_05912" /db_xref="WormBase:WBGene00144637" mRNA complement(join(<292983..293084,293481..>293579)) /locus_tag="CAEBREN_05912" /product="hypothetical protein" /db_xref="WormBase:CBN05912" /db_xref="WormBase:WBGene00144637" CDS complement(join(292983..293084,293481..293579)) /locus_tag="CAEBREN_05912" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38588.1" /db_xref="WormBase:CBN05912" /db_xref="WormBase:WBGene00144637" /translation="MHFVQFLLLVVLFSATLALPFFNSPTVSSQKYIGRTYGGQWRQM YTDENLEVPQNPRYIMSNRMRG" gene <295472..>297778 /locus_tag="CAEBREN_00465" /db_xref="WormBase:WBGene00139190" mRNA join(<295472..295815,295862..295963,296265..296502, 296551..296872,296927..297549,297602..>297778) /locus_tag="CAEBREN_00465" /product="hypothetical protein" /db_xref="WormBase:CBN00465" /db_xref="WormBase:WBGene00139190" CDS join(295472..295815,295862..295963,296265..296502, 296551..296872,296927..297549,297602..297778) /locus_tag="CAEBREN_00465" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR015350 (Beta-trefoil), IPR015351 (LAG1, DNA binding), IPR002909 (Cell surface receptor IPT/TIG), IPR013783 (Immunoglobulin-like fold)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38627.1" /db_xref="InterPro:IPR002909" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR015350" /db_xref="InterPro:IPR015351" /db_xref="WormBase:CBN00465" /db_xref="WormBase:WBGene00139190" /translation="MLNPYYPYYPYYGFGTPTTNVTNDINIETDQANQNAIPSDSGTG SSLNMDQEPRIHRAPLAMDQFEKGSENSNSMDRSSGATSTASKPMTNSHLEYYAKLSS LHRLIGTVQTLTSDRMIEFLWNKEKYECVISIFYAKVAQKSYGNEKRFFCPPPCIYLI GQGWKVKKERIAALTKELMGKNPAMDQQSTELVAYIGIGSDHTERQQLDFSTGKVRHP GDSRQDPSIYDYCAAKTLYISDSDKRKYFDLNAQFFYGCGMEIGSFVSQRIKVISKPS KKKQSMKNTDCKYLCIASGTKVALFNRLRSQTVSTRYLHVEGNAFHASSTKWGAFTIH LFDDERGIQETENFAVRDGFVYYGSVVKLVDSVTGIALPRLRIRKVDKQQVILDASCS EEPVSQLHKCAFQMIDNEMVYLCLSHDKIIQHQAQIIGENRHQINDGAAWTIISTDKA EYRFFEAMGQVGAPISPCPVVGSLEVDGHGEAARVELHGRDFKPNLKIWFGSTPLDTI FRSEENLSCKVPPVTQVRNEQTNWMFTNKTTGDIEVPISLVRDDGVIYSSGLTFSYKS MERHGKVRKAINSIRGFLKNRKPSPPLITPEFSFL" assembly_gap 298531..298540 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<299317..>299700) /locus_tag="CAEBREN_12272" /db_xref="WormBase:WBGene00150997" mRNA complement(join(<299317..299418,299623..>299700)) /locus_tag="CAEBREN_12272" /product="hypothetical protein" /db_xref="WormBase:CBN12272" /db_xref="WormBase:WBGene00150997" CDS complement(join(299317..299418,299623..299700)) /locus_tag="CAEBREN_12272" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38622.1" /db_xref="WormBase:CBN12272" /db_xref="WormBase:WBGene00150997" /translation="MHFVQFLLLVVLISATLALPFFNSPTGQTYGGQWRQMYTDENLE VPQNPRYIMSNRMRG" gene <302671..>305738 /locus_tag="CAEBREN_01857" /db_xref="WormBase:WBGene00140582" mRNA join(<302671..303029,303074..303322,303393..303939, 303984..304160,304214..304939,304990..305076, 305646..>305738) /locus_tag="CAEBREN_01857" /product="hypothetical protein" /db_xref="WormBase:CBN01857" /db_xref="WormBase:WBGene00140582" CDS join(302671..303029,303074..303322,303393..303939, 303984..304160,304214..304939,304990..305076, 305646..305738) /locus_tag="CAEBREN_01857" /note="contains similarity to Pfam domain PF00225; contains similarity to Interpro domains IPR001752 (Kinesin, motor domain), IPR019821 (Kinesin, motor region, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38579.1" /db_xref="InterPro:IPR001752" /db_xref="InterPro:IPR019821" /db_xref="PFAM:PF00225" /db_xref="WormBase:CBN01857" /db_xref="WormBase:WBGene00140582" /translation="MFFCRLCPYSGSTPSLIAIDERSVKTVLPPPQFRRENAPQVEKI FGFGRVFSEHDGQEAVFEKASMSLILDLLKGQNSLLFTYGVTGSGKTYTMTGKPTESD TGLLPRTLDVIFNSINNRVEKCVFYPAALNTFEIRSSLDAHMKRHQMANDRLSTSREI TDRYYEAIKLSGFNDDMVCSVFVSYVEIYNNYCYDLLEDAKNGVLTKRELRHDRQQQV YVDGAKDVEVSSSEEALEVFCLGEERRRVSSTLLNKDSSRSHSVFTIKLVMAPRAYET KNVYPVMDSSQIVVSQLCLVDLAGSERSKRTQNVGERLAEANSINQSLLTLRQCIDVL RRNQKSTSNVEQVPYRQSKLTHLFKNYLEGNGKIRMVICVNPKPEDYDENMSALAFAE ESQAIEVKKQVERLPSERIPHAFFTQWNVELDGSIQIDDRSETPCPPTFCLRDYNDNE TVESLRTYARKLAALQNSSDDSSSSSLLAVSRQYMMEADYQRLEINRLKDALQQKDED MEKLRAQCRKYKHEKASMKARIAELEQAEADRADTMKLLMDQKAEDNKIIQSQKKAMR NVRGIIDNPSPSVASLRSRFDQENILTHPSAPMQTPPPPYQTPGRQPVFRKRLEATTS TTAVSGLASGANGQQGYVNPKYQRRSKSASRLLDHQPVHRVPTGTVLQTRTPGNAITT TKPELSQLNKSGEYRLTHQEVDKEGNISTNIVKGDVIPTVSGGTAVFFHDIEKLTHES PATRK" gene complement(<306584..>310922) /locus_tag="CAEBREN_29788" /db_xref="WormBase:WBGene00191753" mRNA complement(join(<306584..306679,307137..307627, 307676..307950,308318..308439,308488..308574, 308809..308922,308973..309176,310782..>310922)) /locus_tag="CAEBREN_29788" /product="hypothetical protein" /db_xref="WormBase:CBN29788" /db_xref="WormBase:WBGene00191753" CDS complement(join(306584..306679,307137..307627, 307676..307950,308318..308439,308488..308574, 308809..308922,308973..309176,310782..310922)) /locus_tag="CAEBREN_29788" /note="contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR013087 (Zinc finger, C2H2-type/integrase, DNA-binding), IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38617.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR015880" /db_xref="WormBase:CBN29788" /db_xref="WormBase:WBGene00191753" /translation="MSSLYLCRDCSGAFGSLDELQRHEKEEHEMNMDDQEDEDKIGDE NEELAMIKIKIEDSDSLSDTDSSHASLNPTTPSEKNGEKGRYECEDCHEMFAVKRELA THMRIHSGEQPHTCTQCGKEFGTRQLLKKHWMWHTGERSHVCPHCNKAFFQKGHLTQH LMIHSGGRPHECPQCHKTFIFKFDLNRHMKIHQERGFSCLQCGRSFLKQIMLDEHHLK CKGKPSSPIRSLLTPTMKAGLESAFSVKPSPETIVLTQETIAKMAQKLLIQQQENQRS ALNTLLVKQQENILNNNNNNDVNILNNKEVGVNGFEIPAPTLPLNLTCMLCKSQFNNQ SSFTLHMYMYHFANQNNNNLSIDSTHLNLPHHHHHHALQPTTIATQNETTSLGSDSDP GTDTSCASSPQKASPLQIMESSSCLEQSSVSPSSSSGASPQPTVSESSTTSSCKDCSN SWQRVHDLEQQVLKKDEEFENYRQMTRQLISNVSTFLTTSAAPENMFMMNVFTQLKNT L" gene <320123..>320380 /locus_tag="CAEBREN_14419" /db_xref="WormBase:WBGene00153144" mRNA <320123..>320380 /locus_tag="CAEBREN_14419" /product="hypothetical protein" /db_xref="WormBase:CBN14419" /db_xref="WormBase:WBGene00153144" CDS 320123..320380 /locus_tag="CAEBREN_14419" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38591.1" /db_xref="WormBase:CBN14419" /db_xref="WormBase:WBGene00153144" /translation="MKKKKGTTCIKTKRKPADVGGMKDSEGEIQETLQGGVTDKKMIV VISRHVRVNRSTLLRSMALLHPAGARCMKPPCVGLVETNCC" assembly_gap 321906..322249 /estimated_length=344 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<322716..>326710) /locus_tag="CAEBREN_32466" /db_xref="WormBase:WBGene00194431" mRNA complement(join(<322716..322882,323346..323511, 323578..323859,323909..324160,324212..324301, 324352..324754,324854..325077,325180..325565, 325613..325788,325835..326031,326128..326387, 326437..>326710)) /locus_tag="CAEBREN_32466" /product="hypothetical protein" /db_xref="WormBase:CBN32466" /db_xref="WormBase:WBGene00194431" CDS complement(join(322716..322882,323346..323511, 323578..323859,323909..324160,324212..324301, 324352..324754,324854..325077,325180..325565, 325613..325788,325835..326031,326128..326387, 326437..326710)) /locus_tag="CAEBREN_32466" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003165 (Stem cell self-renewal protein Piwi), IPR003100 (Argonaute/Dicer protein, PAZ)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38612.1" /db_xref="InterPro:IPR003100" /db_xref="InterPro:IPR003165" /db_xref="WormBase:CBN32466" /db_xref="WormBase:WBGene00194431" /translation="MSIKPSEQSNGKSNGVEKPSDISAPPSKQSNGDANNGEKTSDVP TQPAEQSNGATNGHVKMSYTKPLAKKQPPVHIAGARMVSVATNIRKLTLPPNQLIYQH RATINIVMRKMDGKEVVVEMSSSKWKHVEHEKDKRICRAVYLKAVAELDVLKDGGQCF YDGQATLWTLKDLGIGEEPLSVTLTEGVSRRKNFVRAQFLLDRPNGPPVSTDDIANTV HENPSLADRRLLDALGIITAEAPSTNIDVFTIKGTHHYLLDSRQAGVHKYSPREGREE SSVGATKSIKTLEGRDGAPGAYMTTEMKATFFHESIPVIEKLRSFAGFHPRLRREDRL AERILANMKGMIIQMNYGQYKNLGIDGILFKITGFGAPPKYQTFNFNGQEICVDEYFN MKHGLDIHYKDLMTIEAKGSGGTLCYFPPEYVLIAPNQTLAGGAPHFRRETTENVSET VGLVSENMAAGLSVTAPLVVDGYILKSPEISRDSQFVEPMTLSNWAIVFIAGEEIPPF ANIITEEMRRCGMRVNNPEFLFISPHDLSDAFIDSKKRKRELLLFITKKARDAHKYIK AAEQRWDVLTQHIHFETAMRIIDKGHKTTLLGCIQKINMKLGGLNYLTDSTSLDEKTI VLGFATSQKPSGYDDTKLVAVGFASNCLDDTHKFLGGYKYVENGKDVYGEHLAEILET ALKAKNRQSKVKPQRVIIYFHGINEAMFPTVRNSYVEICEKVFYQRGKTYKPELTIIA STKLHNERLYMDDRGEIRNLEPGTVVSSVIVSPVYNEFYHTGNRPFRGTTKPTKYTVV YAPEPVNMEQIQTLTNDLCYDAQIIRAPISVPTPIHIAMDSAERGSAIMFAIFEEGVW SCGLLENERGVHIHQKESWKHKIQRLIIILFSFLFSFLCIFFCNHFYLLELRRRRVRT QVVSGPFRAAEAGRKLRIECQWIVIRHVLWLLDEEEEEVLMEEE" assembly_gap 326745..335126 /estimated_length=8382 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<337849..>338502) /locus_tag="CAEBREN_05412" /db_xref="WormBase:WBGene00144137" mRNA complement(join(<337849..338115,338169..338393, 338437..>338502)) /locus_tag="CAEBREN_05412" /product="hypothetical protein" /db_xref="WormBase:CBN05412" /db_xref="WormBase:WBGene00144137" CDS complement(join(337849..338115,338169..338393, 338437..338502)) /locus_tag="CAEBREN_05412" /note="contains similarity to Pfam domain PF01472; contains similarity to Interpro domains IPR002478 (Pseudouridine synthase/archaeosine transglycosylase), IPR004521 (Uncharacterised domain 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38599.1" /db_xref="InterPro:IPR002478" /db_xref="InterPro:IPR004521" /db_xref="PFAM:PF01472" /db_xref="WormBase:CBN05412" /db_xref="WormBase:WBGene00144137" /translation="MFKKFDEKEDITGATQLKSSVQKGIRKKLIENYPYIEPHLEEIL PKKENFKVIKCKDHIELLADHLGIVRFVKTRNTDYIPTLRTLHKYPFILPHQQVDKGA IKFILNGSSIMCPGLTSPGAKLTPLVPKDTVVAVMAEGKQHALAIGLMSMSSEEIQSI NKGNGIESLHYLNDGLWHLAEKSLN" gene complement(<338778..>340132) /locus_tag="CAEBREN_24887" /db_xref="WormBase:WBGene00163612" mRNA complement(join(<338778..338948,338996..339656, 339708..339802,340025..>340132)) /locus_tag="CAEBREN_24887" /product="hypothetical protein" /db_xref="WormBase:CBN24887" /db_xref="WormBase:WBGene00163612" CDS complement(join(338778..338948,338996..339656, 339708..339802,340025..340132)) /locus_tag="CAEBREN_24887" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38564.1" /db_xref="WormBase:CBN24887" /db_xref="WormBase:WBGene00163612" /translation="MLIDGVLGPSESGKFIVEHGSLVKINKESVGRVAEQILEAAKDG SIKSALFLSPELHPKTGDKQAVQWVLLVDTINFSFWPDEGAHYDVSWNGKSYTGYFAA CAAVNRAIAEGIDVLSAEWMKNANKEEIDKIFKSDSGHSIPLLEERVKAINESGRVLL EKFDGEFYNCVLKSEKSAQNLLKLIVENFTSFRDFAEFNGQKVSLLKRAQILVADVYG SLQGHDEVGDFKDISSITMFADYRVPQALAYLGALEYSQELLDQIGEGKRLDNGSAAE VELRGASIAVCDEIVAKMNQLRAEDPRYSEVREITAMEVDVFVWGYRRLHAADVEKKV PFHRTRCIYY" gene complement(<340437..>341222) /locus_tag="CAEBREN_01562" /db_xref="WormBase:WBGene00140287" mRNA complement(join(<340437..340651,340697..340922, 340968..>341222)) /locus_tag="CAEBREN_01562" /product="hypothetical protein" /db_xref="WormBase:CBN01562" /db_xref="WormBase:WBGene00140287" CDS complement(join(340437..340651,340697..340922, 340968..341222)) /locus_tag="CAEBREN_01562" /note="contains similarity to Interpro domain IPR001938 (Thaumatin, pathogenesis-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38566.1" /db_xref="InterPro:IPR001938" /db_xref="WormBase:CBN01562" /db_xref="WormBase:WBGene00140287" /translation="MNSLCTLLLLAFVYSTSAREIKIYNKCPFTTWPGILGPGNPAGG GFRLNAGETKSIHVDDAWKAGRIWPRTECDGNMNCATGSCGPREQCQGAGGEPPASLA EFTLRGHEGLDFYDVSLVDGYNIPVLIDVQGGQGDCKRAGGCIKNINDICPGDLAVKK DGRTVACKSGCLAYNNDQECCRGAFGTPDKCRQSKTAMLFKNACPSAYSYAYDDATST FTCKGATYVVQFC" gene complement(<341756..>342287) /locus_tag="CAEBREN_24681" /db_xref="WormBase:WBGene00163406" mRNA complement(join(<341756..342048,342155..>342287)) /locus_tag="CAEBREN_24681" /product="hypothetical protein" /db_xref="WormBase:CBN24681" /db_xref="WormBase:WBGene00163406" CDS complement(join(341756..342048,342155..342287)) /locus_tag="CAEBREN_24681" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38623.1" /db_xref="WormBase:CBN24681" /db_xref="WormBase:WBGene00163406" /translation="MLLLVAILCALGSSYSTEIPIFKVHGTLTCYGIPYHGDMLMTGG GYLHSLTNVNDTGKFSLAAELSHGLHDLTLIIEHNCIEWKNREFGSGAEMFSEYPINI LDLILSKYSLERNIELSTLYLEFSLPELYLRKLYYYSRR" gene complement(<342972..>353945) /locus_tag="CAEBREN_01769" /db_xref="WormBase:WBGene00140494" mRNA complement(join(<342972..343082,343127..343234, 343341..343427,343658..343729,343814..344255, 344416..344689,344791..344926,345023..345116, 345164..345320,345507..346350,346482..346659, 346712..346806,346858..346989,347303..347618, 347735..347917,348358..348459,348703..348823, 348977..349074,349166..349344,349467..349604, 349651..350145,350331..350827,351067..351182, 351233..351374,351421..351520,351611..351745, 351841..351905,352317..352472,353882..>353945)) /locus_tag="CAEBREN_01769" /product="hypothetical protein" /db_xref="WormBase:CBN01769" /db_xref="WormBase:WBGene00140494" CDS complement(join(342972..343082,343127..343234, 343341..343427,343658..343729,343814..344255, 344416..344689,344791..344926,345023..345116, 345164..345320,345507..346350,346482..346659, 346712..346806,346858..346989,347303..347618, 347735..347917,348358..348459,348703..348823, 348977..349074,349166..349344,349467..349604, 349651..350145,350331..350827,351067..351182, 351233..351374,351421..351520,351611..351745, 351841..351905,352317..352472,353882..353945)) /locus_tag="CAEBREN_01769" /note="contains similarity to Pfam domain PF00520; contains similarity to Interpro domains IPR020606 (Ribosomal protein S7, conserved site), IPR005821 (Ion transport)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38572.1" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR020606" /db_xref="PFAM:PF00520" /db_xref="WormBase:CBN01769" /db_xref="WormBase:WBGene00140494" /translation="MSAERKKSLITTINNQRKYSQVAKAAVLSSAMLARKNSSSRGAP GSAATFGARESIAAISDMLSTQHKKPVRSSYVESDRVEWALKIACTISMITVCLHTPR TIELFPPLTYIILAADFISVSIFMLDSVLRIHYEGIFRCDSSYLSNRWSQFSVFISII HLLSFLLHCYQLIDKFFPFLHLNYRTWYGVIRSIRPFIIIRLIPLIVKFKLPKNRIEQ LLKRSSQQVKNVTLFFVFFMTLYAIFGIQLFGRMDYHCVQPKTDPNNVTIMDLAIPDT MCAPEGIGGYECPAPMVCMQLNLNAKGEGFYGMFNDFGASVFTVYLAASEEGWVYVLY DCMDSLPSYLAFLYFCTLIFFLAWLVKNVFIAVITETFAEIRVQFSEMWQKKEVTLDE GFRKKLEKTDDGWRLIRLDGEVEAEGPKQKLQWMLRSMYFQCFVIIFVVLNAIGNAMF VYRHDETDVLRKHNFYLFEVGFTILFNVECIIKILCYGFRNFIRRGIFKFELILCLGS SLNCVKFFYDRNYFTYFQTFRLLRLIKASPILEDFVWKIFSPGKKLGGLVIFTIAFIC CCSAISLQLFYSVPNLHHFRTFPQAFMSMFQIITQEGWTDFVVEVLRATDDNLVPFVA LYFVAYHLFVTLIVLSLFVAVILDNLEMDEELKKVKQLKAREATTSMRSTLPWRLRVF EKFPTRPQMAVMRKADSDFPMPKVRGSFTHQFAVDHSLETTDVLDSDFEFPKRLMRSA NKRKISKHGLTFRQVGSTSLRCSLNNLLEMSDRTRQSLSNSLSFLPHFTRSSGSLYPR KDALPKSRSMTGKFLQTAVRNKQFNMYSENGDLSRPSDSAPKKNAKQGEIDIRALQQK RQLAEITRNRIEEDMRENHPFFDRPLFLVGRASQLREFCKKLVHSKYDSQDDGINGGG KTKKRFKEIRALIGIMPYIDWAMATVTIVSCISMLFESPWPTTGENLVMNNGYLQIGD YFFVLAMTFELCVKIIANGLFFTPKAVVRDVGGVMNLFIYFTSVIFLAWMPKHVEINS LAQFLMICRAMRPLRIYTLVPHIRRVVLEFFRGFKEIVLVTILMIVVMFIFASFGVQI VGGKLAACNDPTVSSRDNCTGVFWQKLFVTRLEVYGKDTEAMHPKIMVPRVWTNPRNF NFDHVGNAMLALFETLSFKGWNVIRDILWNRHGPWAVVFIHIYVFIGCMIGLTLFVGV VIANYTQNRGTALLTVDQRRWHDLKARLKMAQPLHVPPKPSESARLRTKLYDLTMSRW FNQAFALLVVLNSFTLVIPWNVEEEEQRATYVFTVTTLAAFMNMLFVIEIILKVIAYT FSGFWQSRRNRVDLLITVFGVIWIFLHFFVALPSSKIDVKFQIELKKFTYTFGYLVVI LRFFTIASRNSTLKMLMLTVVMSMFRSFFIITALFLLVLFYAYTGVILFPMVKYGMAV SKHVNFRTASEALVVLFRCLTGEDWNDIMHDCMRSAPFCYWIEGMNYWETDCGNFYGA IIYFCSFYLIITYIVRNLLVAIIMENFSLFYSSEEDALLSYADIRNFQYVWNMVDQEQ KRTIPVERVKFLLRLLKGRLEVNPETDRILFKHMCYEMERLHNGEEVSFHDVLYMLSY RSVDIRKSLQLEELLQREELEFIIEEEVAKQTIRTWLEGCLRKMRNPSQKDSEGVISS GVGGHPVVHSSGHSSISHEETIAQRLRFESVRGDSVETEETESSEEETPPPIRKKAAV KNRRGSIPDVLSVSFRTSSCGMKSFERRTGLFQEAARKFMVGSSSEKKQVKSRSPETV QLLPKRASSEIRKGSGQPKNFHLQLNVYDLPDVEERGEDSPFSPKNLSDDFMGEHSPL VITPSLPVPSTQGSPRPQMPSETTKDIEKWWNSLVD" assembly_gap 365875..366261 /estimated_length=387 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <371457..>373691 /locus_tag="CAEBREN_14167" /db_xref="WormBase:WBGene00152892" mRNA join(<371457..371602,371755..371919,372067..372199, 372702..373033,373176..373284,373336..373470, 373521..>373691) /locus_tag="CAEBREN_14167" /product="hypothetical protein" /db_xref="WormBase:CBN14167" /db_xref="WormBase:WBGene00152892" CDS join(371457..371602,371755..371919,372067..372199, 372702..373033,373176..373284,373336..373470, 373521..373691) /locus_tag="CAEBREN_14167" /note="contains similarity to Pfam domain PF00026; contains similarity to Interpro domains IPR009007 (Peptidase aspartic, catalytic), IPR001969 (Peptidase aspartic, active site), IPR001461 (Peptidase A1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38569.1" /db_xref="InterPro:IPR001461" /db_xref="InterPro:IPR001969" /db_xref="InterPro:IPR009007" /db_xref="PFAM:PF00026" /db_xref="WormBase:CBN14167" /db_xref="WormBase:WBGene00152892" /translation="MKHSLFSLVFLLGSLFLCDAKYQIRVERGKLIKHAPQKYGLRRF DRFIGAQHQHVADFRDYGYFGNITLGTPKESTNDQTFLVVLDTGSSNLWVPDNSCGAN DANSACKHKNKYIMSDSSSYEKDGRPFSISYGTGSASGYFGKDTLCFSDTTLCIKSQV FGQANSIAPFFANQEIDGILGLGFTDLAVNKAPPPFVNAVDQGLVDEPIFTVYLEHHG RDRAPSGGYFTYGGEDPDHCGEIITWIPLTKAAYWQFNMQGIGIENSNEHTNGWEVIS DTGTSFIGGPGSVIQAIAKKYGASYDEFNDSYIVPCSKAKNLPALKLKINDMELQIDP INLIAHSDATECDLTLFDMYGGGFGPSWILGDPFIRQFCNIHDIKNKRIGLAHSKQPE DVTF" assembly_gap 380909..387399 /estimated_length=6491 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <388242..>390119 /locus_tag="CAEBREN_24504" /db_xref="WormBase:WBGene00163229" mRNA join(<388242..388378,388737..388868,388917..389009, 389057..389177,389223..389257,389374..389464, 389510..389760,389984..>390119) /locus_tag="CAEBREN_24504" /product="hypothetical protein" /db_xref="WormBase:CBN24504" /db_xref="WormBase:WBGene00163229" CDS join(388242..388378,388737..388868,388917..389009, 389057..389177,389223..389257,389374..389464, 389510..389760,389984..390119) /locus_tag="CAEBREN_24504" /note="contains similarity to Pfam domain PF00001; contains similarity to Interpro domain IPR000276 (7TM GPCR, rhodopsin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38629.1" /db_xref="InterPro:IPR000276" /db_xref="PFAM:PF00001" /db_xref="WormBase:CBN24504" /db_xref="WormBase:WBGene00163229" /translation="MYQTHGVYFIFEPTPFVHPIYSQIFYGILFTLTIFLALMGNFTV MWIILYHRQMRSVTNYYLFNLAVADASISVFNTGFSWSYNYYYVWKFGSFYCRINNLM GITPICASVFTMIVMSIERYYAIMHPLKKRPGRRSTVSIIIMIWLLAFLFGVPAFLAS KVDVYYFYDGITFYNNGLITVQYILPLCILSAAYYRVGVELRKDKTVGDVRHAKSVAA KKKASIMLAVVVFIFMIVWFPYNAYYLTLHLVEPIGNKMLSLYIYINIYWLGMSSTVF NPVIYYFMNKRFRVGFHHAFRWLPFVRSDKDEYHTILSQTRPSLMPPTTMAHTDF" gene complement(<390276..>390902) /locus_tag="CAEBREN_17474" /db_xref="WormBase:WBGene00156199" mRNA complement(join(<390276..390448,390676..390772, 390828..>390902)) /locus_tag="CAEBREN_17474" /product="hypothetical protein" /db_xref="WormBase:CBN17474" /db_xref="WormBase:WBGene00156199" CDS complement(join(390276..390448,390676..390772, 390828..390902)) /locus_tag="CAEBREN_17474" /note="contains similarity to Pfam domain PF09791; contains similarity to Interpro domain IPR019180 (Oxidoreductase-like, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38574.1" /db_xref="InterPro:IPR019180" /db_xref="PFAM:PF09791" /db_xref="WormBase:CBN17474" /db_xref="WormBase:WBGene00156199" /translation="MSIAVNNGLSIIRRCTQRFLGSYNMRPPIEPDPGMCCQEGCESC VWLVYAQELLDYFRSKYPTDTLKRVKEEIGDKIESPSVKEYVMMEISMTEKRYRDMAS IGIKKTKSGERK" gene <391646..>393066 /locus_tag="CAEBREN_00229" /db_xref="WormBase:WBGene00138954" mRNA join(<391646..392108,392471..>393066) /locus_tag="CAEBREN_00229" /product="hypothetical protein" /db_xref="WormBase:CBN00229" /db_xref="WormBase:WBGene00138954" CDS join(391646..392108,392471..393066) /locus_tag="CAEBREN_00229" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38577.1" /db_xref="WormBase:CBN00229" /db_xref="WormBase:WBGene00138954" /translation="MSRLAGRVTFPGAAPATKNPSYSSDRVEIQDARRAGNNNRNNRN QDEVRPRGRGNIRYQGNYSDRFQTQDRTEDVERSDRGQRHQNQQFDRQGPRSDRPQKL DRSDRSDRFQKPEGGPYRSDRGFDRSERPPRSDRSDRSPTDSQTQNQKPPHYQNEIFS AVMSDELMDASSKHIMKNDDKPIPALLSAILCAHWPRQYAKAFSNVNPILYTVVCIVK GWIEVVKEDTENFYKEEPKPKYQGREDPDDTPEKEVAPEEEKEKVIEDPVLVNKCAVA LSDLCDTAQRQLWVNWMQVTDEIYTFIKPTITHNPNITGDVKARLLDTFIQMNQWTKT RQAGVKHAGVQTVSTASD" gene <393660..>394841 /locus_tag="CAEBREN_23982" /db_xref="WormBase:WBGene00162707" mRNA join(<393660..393914,393961..394088,394136..394390, 394435..394678,394728..>394841) /locus_tag="CAEBREN_23982" /product="hypothetical protein" /db_xref="WormBase:CBN23982" /db_xref="WormBase:WBGene00162707" CDS join(393660..393914,393961..394088,394136..394390, 394435..394678,394728..394841) /locus_tag="CAEBREN_23982" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38626.1" /db_xref="WormBase:CBN23982" /db_xref="WormBase:WBGene00162707" /translation="MSTDVKKFFLAARRELDDNGAVLVLVDPWTGERHLMNESQLRDT YSIGLGDFMHAYVDPMKILYKISKTEHTARLWTKVDGNVAFVENVLSHLNLVKGELLF QNKLFGDSLCSDKSLAPGDYKIKIHLLETPHQLSNGRKVHFQGTDAEPRVPKPTIGAG FPAAPKKDGKFIGAGFQSASKNEDLVEMRAVVLSSIAKPIGTHYYVWNVDSRTEALFV SKEHDLQQGHFFVGVFKKKPDGRMTCQRYEKPIEQLFEGGLTDKNKIYFTVKIDNYQP AEGNSKYASAFAKYFGNVLEGDTEGTKLSTESNGKMVNIQRRRIGEKDFVWMITE" gene <396115..>396868 /locus_tag="CAEBREN_22164" /db_xref="WormBase:WBGene00160889" mRNA join(<396115..396258,396304..396380,396428..396500, 396548..396718,396761..>396868) /locus_tag="CAEBREN_22164" /product="hypothetical protein" /db_xref="WormBase:CBN22164" /db_xref="WormBase:WBGene00160889" CDS join(396115..396258,396304..396380,396428..396500, 396548..396718,396761..396868) /locus_tag="CAEBREN_22164" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38567.1" /db_xref="WormBase:CBN22164" /db_xref="WormBase:WBGene00160889" /translation="MKYCAEVKEKVNEVATPSLTSTANNVIVGAGFAPAAPSSSSNRD GKKIMNAFVHSVMKKGDLNTHFLWICDNHQNSIFTSKVHNLAVGHFFEGIFEEKMNAK SKWQCVKYVKGINALLEGSVVGNKIQLKTKISRYHGSEGREFPTVYAEHFGTIIDNKK KLPENCDGRFITTQLCKVGSDFEWVVIELI" gene complement(<397322..>398250) /locus_tag="CAEBREN_25028" /db_xref="WormBase:WBGene00163753" mRNA complement(join(<397322..397556,397604..397833, 397876..398027,398074..398164,398236..>398250)) /locus_tag="CAEBREN_25028" /product="hypothetical protein" /db_xref="WormBase:CBN25028" /db_xref="WormBase:WBGene00163753" CDS complement(join(397322..397556,397604..397833, 397876..398027,398074..398164,398236..398250)) /locus_tag="CAEBREN_25028" /note="contains similarity to Interpro domain IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38560.1" /db_xref="InterPro:IPR002213" /db_xref="WormBase:CBN25028" /db_xref="WormBase:WBGene00163753" /translation="MDVPMIRAHATVLSCNRFDHVSDVLGQPIAPSYVPGTQSFFNDR MTMKERLLNLIQFHYGRFTFANILDQEYEMAKEILGIQRSWREVLPEASFIFSNHIPV LAFPAPTFDKIIPIGGFTIKMNQKRLNLDEEFDKILNMRKRNVLISFGSASKSKDMPD VYKQSLLKVFKSMSDTTFIWKYEDETDRIAEDLDNVFIFSWLPQNELLADKRVNIFVT HGGLASVMELALLGKPSVMVSL" gene <399535..>401491 /locus_tag="CAEBREN_18611" /db_xref="WormBase:WBGene00157336" mRNA join(<399535..399617,399665..399737,399794..399967, 400457..400597,400652..400782,400829..401368, 401413..>401491) /locus_tag="CAEBREN_18611" /product="hypothetical protein" /db_xref="WormBase:CBN18611" /db_xref="WormBase:WBGene00157336" CDS join(399535..399617,399665..399737,399794..399967, 400457..400597,400652..400782,400829..401368, 401413..401491) /locus_tag="CAEBREN_18611" /note="contains similarity to Pfam domain PF03312; contains similarity to Interpro domain IPR004987 (Protein of unknown function DUF272)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38571.1" /db_xref="InterPro:IPR004987" /db_xref="PFAM:PF03312" /db_xref="WormBase:CBN18611" /db_xref="WormBase:WBGene00157336" /translation="MTALVVHVAESNETKTKLHFIWICDIQEESLIRDPVYDLQIGHF FEGEFEKKKYGRWEFMSYIKEVEGLIEGNINQICGRIELIVPINHYEQQSDSSECPIV HADYLGEIVLEKELSASDIKIGDFMKATLTPQNRLTNYEVIDYPFTVTVKGNFATIKF ASATATRDEKGNLVFQTKSFGPVQSLKQDIPLGFYDILIKAVDSTTNYNITLCAEPLA TAKSPVAAENYEINNSKLFPKNVSPINRSELPNLPVSSMNSNIPRPTSTNSYSYISST DSMKTDYVELRNCVSTRSELSLGELISALPVLDSSAPPTPKPRTITPVPMPGNQSKLK PILKVPPTKPTAVPIPAVKTMKAFVHSVLDHQNKKRMHFLWICDIKQDSVLKFPITPL QIGHFFEGVFKQQV" gene <403531..>404987 /locus_tag="CAEBREN_04956" /db_xref="WormBase:WBGene00143681" mRNA join(<403531..403761,403822..403946,403994..404473, 404523..404595,404646..404822,404868..>404987) /locus_tag="CAEBREN_04956" /product="hypothetical protein" /db_xref="WormBase:CBN04956" /db_xref="WormBase:WBGene00143681" CDS join(403531..403761,403822..403946,403994..404473, 404523..404595,404646..404822,404868..404987) /locus_tag="CAEBREN_04956" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38583.1" /db_xref="WormBase:CBN04956" /db_xref="WormBase:WBGene00143681" /translation="MEAPQENILFAARRYLNAENLPTLILVNVKTGQRFPIAEEVLKN DQDCKLGEYISYVNSKLTKKNYLPSTVEGDVAYVDNIQSKLVKVEGTLLFQNDFFADS LCVQPLPPGDYVIRVSLRLQEHKLPSGVSIHFDASNVRTKQENFQTRSLFSPISPPRS PIPNPPVTPGSSTLPQKGPIVKGTGFPAHPKSVPKPNNNKEKVFGAGFSAKEAPKQEK KVKVGDGFAPPEKKKDQVIVGAGFEQVTQKKQKLRAVVLSITENPKTNQNTHFLWILE KQAEGRFVSKERKLLPGHFFSGTYVENKPGKWNCEQYENQIEKPAGIDGGMDADNKIW FVVTINNFQPAGANRKMGSAKAKFFGEVLEGELPSTKLSAERNMKKVKIQRKGIAQGD YVWMVVELL" gene <411104..>416545 /locus_tag="CAEBREN_15005" /db_xref="WormBase:WBGene00153730" mRNA join(<411104..411264,411311..411777,411852..412042, 412537..412682,412727..413366,413777..413922, 413972..414360,414467..414675,415510..415658, 415778..416256,416307..>416545) /locus_tag="CAEBREN_15005" /product="hypothetical protein" /db_xref="WormBase:CBN15005" /db_xref="WormBase:WBGene00153730" CDS join(411104..411264,411311..411777,411852..412042, 412537..412682,412727..413366,413777..413922, 413972..414360,414467..414675,415510..415658, 415778..416256,416307..416545) /locus_tag="CAEBREN_15005" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38604.1" /db_xref="WormBase:CBN15005" /db_xref="WormBase:WBGene00153730" /translation="MLPLQNCATSQCPTGGIWSEWSTTETCPTSCGSCSKIYYTRKCL TSSITGCSCTGSNSKYYPCNTQTCVYPAQRTCCIPYVPMIVGGKSICGPLPKEAEVTS CCPIDGIWSEWTAFFRNDKENRFDRTRKCLTADAGCDCTGEDLEFKNGCPCTSFPGTS DADINRVLRTRKDGAIQQLVPRLNPVLDSTTCIFTAEINTDEDYCNVWKQHKSTAVMR YITPQNKNVSLEERVADCTVAKTTYFQMYCDFKTGNYRYYKNNHEVYAWSQISYNACA DGVTCPPGGIWSEWSTSEVCSTSCGSCSKLYYKRTCLSENANCNCTGDTSRYLPCNTQ TCVYPAQRTCCIPYVPMIVSGKSICGPLPRDTSSTTTSCCPKNGLWSDWSGFGSVSDG WMQTRECLSESAGCPCTGSSSNTQSTCPCPAMQTDQQVATACAGTLLWQKNNVITDDL KCTRTATLIASNNVVVACHPYGTYQYAPYVFFSTPANTCPFDRPWNCEARKEPGGNDA TLDITFTCNLEKLQWMYDYDGSFVNGYVCPDGSTCPDGGLWSEWSTSDTCATNCGACS KMYYKRRCLTERSGCVCTGPASRYVPCNTQTCVYPAQKTCCIPYVPMIVAGKSQCGPL PKEPVPTANSQCCPKDGIWSEWTGYTSSSKEWARTRECTSEEAGCPCTGVSIQNQEGC PCPDMRTDVDVANICKVSKYIGNESKRNETRYDFYQSYDYAPVVTLLKSTNECYRDTP FNCESRREQGAAATRTIQFSCNLETRQWYYEYDGTPVIGFVQHACTSSGCPTGGIWTE WAVTGSSNCSASCGSCASLYYTRRCVSQRAGCNCTGGTSRYIPCNTNVCAYPSQKSCC SPYLPMVINGSYLCGPIPTDKSSTTTSCCPTGGLLSDWSIYGRNDANTQWIRTRECLT ADLGCSCTGDLIESVTACPCSATMNNIPGGTCDTANYQATYFTNIVVNDTKCEATLQI QATNYINTVNSQKVIYCNHDGNYTTYGTPILLFQIAPNETRASTCAFDRPFDCGTVAS TADSHPTLPVSFTCDLSSNTWQYDYNGWHVTGYNQPQLLYT" gene complement(<416944..>419392) /locus_tag="CAEBREN_26277" /db_xref="WormBase:WBGene00175076" mRNA complement(join(<416944..417055,417112..417653, 417702..417990,418035..418232,418280..418601, 418913..419111,419162..>419392)) /locus_tag="CAEBREN_26277" /product="hypothetical protein" /db_xref="WormBase:CBN26277" /db_xref="WormBase:WBGene00175076" CDS complement(join(416944..417055,417112..417653, 417702..417990,418035..418232,418280..418601, 418913..419111,419162..419392)) /locus_tag="CAEBREN_26277" /note="contains similarity to Pfam domain PF01756; contains similarity to Interpro domains IPR013786 (Acyl-CoA dehydrogenase/oxidase, N-terminal), IPR006091 (Acyl-CoA oxidase/dehydrogenase, central domain), IPR013764 (Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal), IPR002655 (Acyl-CoA oxidase, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38625.1" /db_xref="InterPro:IPR002655" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR013764" /db_xref="InterPro:IPR013786" /db_xref="PFAM:PF01756" /db_xref="WormBase:CBN26277" /db_xref="WormBase:WBGene00175076" /translation="MSAPLIDKYRKMATFDWRKLKAAVEGEEHVRLKAEVVAKMKSEP IFHRDYRVLSREEHREVVHQRWKKIVEWGLFKDPYSDLENFHALTETLEAYDQGTSAR LFLHGNVFGAAVKSMGTERHKELVEKIENNEVCISIRDSAHSHSATHVVVYAQLHVDG KNEGLHGFVIQVRCPRSFQTLPGITIGDMGSKPGCWQGVENGWMEFKNHRAPLSALLN KGCDITPDGKYVTSFKSASEKQSVSLGTLSVGRLGIIAKGMMACTFASTIAIRYSVAR RQFGPEKGVENEVPVLEYPLQQYRLFPYLSAAICIRIFQKTFVERFTEYMMRVMMGEK SEELSEFSKEVHALSSGAKPVATWLGVESLGEARKACGGHGFLHMSRLNTLRDDNDPS QTFEGENFMILQQTSNILLGKVRSLGSIDTPMSTMSFLNKNPSKFSSWSSNPVDDVLS AYRYLAYHLLQMTASDANKLKNSGKNAFEVRNEIQVHRAVNLSIAYTEHTMIDWVQKF LEDVEDSTVKNVLQKVLNLFSLFLLERHLATLYITGYASGGKFGEELREKLRLAVAEI KPESMALVDSIAPDDFILHSALGASDGRAYDHIMEEFRKYTNEQPRWVCDLAQFLQKR SQHAKL" assembly_gap 420035..420305 /estimated_length=271 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<420470..>422050) /locus_tag="CAEBREN_26278" /db_xref="WormBase:WBGene00175760" mRNA complement(join(<420470..420844,421436..421579, 421851..421962,422010..>422050)) /locus_tag="CAEBREN_26278" /product="hypothetical protein" /db_xref="WormBase:CBN26278" /db_xref="WormBase:WBGene00175760" CDS complement(join(420470..420844,421436..421579, 421851..421962,422010..422050)) /locus_tag="CAEBREN_26278" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38590.1" /db_xref="WormBase:CBN26278" /db_xref="WormBase:WBGene00175760" /translation="MWMILRRHSANVSKSLQRELYLAFQVFALLCAFFVMFLYYLLQN YFSQTQNSGPVYTMRALYPIANGILSYINPFCILLLNRDFCRQFMRTLKCKRIRVCIA DIISMIVFTTIWGIRMLPGLKEFYFNFQEYYIAAGTYNSIYFFLYIRCAGIVFLSIHR YLVISLPHHRVTMRIQEAVTWQLVVVYWTVPTLISIVVLKDTDFHYDALETMEVVAPR PVITV" assembly_gap 422063..423061 /estimated_length=999 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<423064..>428769) /locus_tag="CAEBREN_07678" /db_xref="WormBase:WBGene00146403" mRNA complement(join(<423064..423150,423196..423339, 423385..423505,423581..423690,423737..424105, 424316..424419,425063..425210,425259..425370, 425412..425521,425570..425716,425767..425876, 425917..426028,426530..426691,427232..427297, 427341..427484,427538..427649,427697..427806, 427895..428041,428092..428313,428602..>428769)) /locus_tag="CAEBREN_07678" /product="hypothetical protein" /db_xref="WormBase:CBN07678" /db_xref="WormBase:WBGene00146403" CDS complement(join(423064..423150,423196..423339, 423385..423505,423581..423690,423737..424105, 424316..424419,425063..425210,425259..425370, 425412..425521,425570..425716,425767..425876, 425917..426028,426530..426691,427232..427297, 427341..427484,427538..427649,427697..427806, 427895..428041,428092..428313,428602..428769)) /locus_tag="CAEBREN_07678" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019426 (7TM GPCR, serpentine receptor class v (Srv), Nematode), IPR000276 (7TM GPCR, rhodopsin-like), IPR000609 (7TM GPCR, serpentine receptor class g (Srg), Nematode)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38594.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR000609" /db_xref="InterPro:IPR019426" /db_xref="WormBase:CBN07678" /db_xref="WormBase:WBGene00146403" /translation="MNETATFVPLTWPMMVYYGMSIVSLPLYILVFVSFLRLRCVSKT YNSTFYSILLQHCIADLLAMSIFFATNPMRVLPFIREFYFNFQHYYITAFSYNSVYYF LYIRCTGIVFLSLQRYYVICCPTYRSTSKVQNASVVTIIFVYWTVPTLISIVVLKDTD FPYDSYEKMAIIADQDVIQRNTLMALIVVSLTCIICSLAYGALFYYIRKHTAGLSRSL RREFHLAVQVFVLLLAFFVILVFYGFQNYFSQTHNTGPIFYMRALYPVANGLLSYINP FCILFLNKDLARHVYQTAICHKPKVSDVQMSGVVTNSTKHPLQTGTFMTDSLEPPTWP LMVFYGMSIASLPFYFVVFACLLRLRCFTTFYNTTFYSILLQHCIADLLAMIIFFAAV DARTYPFLKEYYFEYQHFYVAAASYNNIYYFLYVRCTGIIFLSLQRYLIITAPTSLIT HKVQNASKLQIISVYWGVPTVTSIVVLKDFNFSYDNLENMSIMADQEVIKRNTLMALI VVSSTCVICSSLYGSLFYYIRKHTAGLSRSLRREVHLAIQVFVLLLAFFVILAYYGFQ NYFSQTQNTGPIFYMRALYPVANGLLSYINPFCILFLNKDLARQVTIFATCHKLPVVI PSLPLYFLVLICLLRLRCYSKTYQSTFYTILLQHCIADIIIMIFYTATWGLRTKPGIR DFLFKYQEFYVAAALYNSIYYTLYIRCTGIIFLSVHRYLVISAPTHRVTITIQDAATW KIILFYWIVPTLISLFVLKDTDVHYNSVEDLEYVVDKSVLSRNTLMALITLSATCMVC VVCYVAMWIIIRKHKNGNQNISRSLQREFYLAFQVLALLCAFFIMFTYYALVNYFSRT QNTGPIFYMRAVYPIANGILSYINPYCVLLLNRDFSKQFRTMLRCRGHHKKARRISTL HSGLSNPALRTSSSQISQNI" assembly_gap 429062..446475 /estimated_length=17414 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 447322..449542 /estimated_length=2221 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <449703..>452546 /locus_tag="CAEBREN_11633" /db_xref="WormBase:WBGene00150358" mRNA join(<449703..449786,449999..450114,452450..>452546) /locus_tag="CAEBREN_11633" /product="hypothetical protein" /db_xref="WormBase:CBN11633" /db_xref="WormBase:WBGene00150358" CDS join(449703..449786,449999..450114,452450..452546) /locus_tag="CAEBREN_11633" /note="contains similarity to Pfam domain PF01423; contains similarity to Interpro domains IPR001163 (Like-Sm ribonucleoprotein (LSM) domain), IPR006649 (Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38578.1" /db_xref="InterPro:IPR001163" /db_xref="InterPro:IPR006649" /db_xref="PFAM:PF01423" /db_xref="WormBase:CBN11633" /db_xref="WormBase:WBGene00150358" /translation="MTSTLESYMNRMVNVVTGDGRVIVGLLKGFDQLINLVIEDAHER SYSETEGVLTTPLGLYIIRGENVAIIGEIDEELDKRLDLENVKAAPLAPIWIPQ" gene <452986..>457092 /locus_tag="CAEBREN_23397" /db_xref="WormBase:WBGene00162122" mRNA join(<452986..452994,453066..453302,453757..453873, 454921..455407,455459..455552,455601..455869, 456203..456939,457006..>457092) /locus_tag="CAEBREN_23397" /product="hypothetical protein" /db_xref="WormBase:CBN23397" /db_xref="WormBase:WBGene00162122" CDS join(452986..452994,453066..453302,453757..453873, 454921..455407,455459..455552,455601..455869, 456203..456939,457006..457092) /locus_tag="CAEBREN_23397" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38600.1" /db_xref="WormBase:CBN23397" /db_xref="WormBase:WBGene00162122" /translation="MNRDRHEARRPTFRDHRTPQFGGGGGQRHKNPAHYPQRRESSPV RRGSPPRRHQEQRQKSPEVRRDQREHRRSEHKESKEDVDRSNNIAARIQAPVVSSSSH SPRHRYSSDQRNDWKRPAMKRPAVDSRPMSYAAGSSSSDRRRHVSGDRHKSSSESTRH HEEKSTTDSARRHNDKSDSGRRHEDKSSGFVRRHEEKSSSDLKRRHDDDKDRRSKHRD DEKKKDEKSSSSGSSRRRDDEKKDRKNGSGSEKKEEEKEVIDRTADENREEDEAVAIQ GLEEVDCCEGDESSEQKMEDGEPVSDKSMHSDRVSNSSHNSDSEEEELDYEEDDVDID LDGDIDVETMKMAARGDLKVESNDEEMDENEEVHEMRDDEDEEVEQKKDEEPEKKRPR TSEKDDKERKPRGSSPSKSHRRREDNKETSSSSDRKDRRRSRSPARQRDTDRKESSSS RRPERITERSSQREGAGTEKQRIPSLLTMRIAAPPGIKNMETFYHSSGGSSSSETVGE AFSNRWCQCSCAHHMPSTSTAGSLDASPASTSSSSSSNSDASVSRIPSLMSLRTPFNN SCLFLAPPPPPRRSHEPAARIRPPSPPRRSIGDRGFQRMDDHRGGRGGPPQRQRSPDR VRRDERRVSNFEDRKRVERGPIDAGRRRSPLRRRVSPPRGRPGEKSVQSYRNGV" gene <457661..>458374 /locus_tag="CAEBREN_22413" /db_xref="WormBase:WBGene00161138" mRNA join(<457661..457796,458067..458186,458232..>458374) /locus_tag="CAEBREN_22413" /product="hypothetical protein" /db_xref="WormBase:CBN22413" /db_xref="WormBase:WBGene00161138" CDS join(457661..457796,458067..458186,458232..458374) /locus_tag="CAEBREN_22413" /note="contains similarity to Pfam domain PF10046; contains similarity to Interpro domain IPR019269 (Biogenesis of lysosome-related organelles complex-1, subunit 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38573.1" /db_xref="InterPro:IPR019269" /db_xref="PFAM:PF10046" /db_xref="WormBase:CBN22413" /db_xref="WormBase:WBGene00161138" /translation="MAEINERASTSSPPVPSTPAPVPHIRQLADNMTEKVGQFFQHQI EGSIEEYKLLENMNNTTAQRYVDMKVVAEKLAGKLDNLNQKYENLRPYLTQIDAMDES TRRLEEATAVLENYVSQLESKLTNIQQQNQ" gene complement(<458590..>459107) /locus_tag="CAEBREN_16202" /db_xref="WormBase:WBGene00154927" mRNA complement(join(<458590..458766,458875..459003, 459048..>459107)) /locus_tag="CAEBREN_16202" /product="hypothetical protein" /db_xref="WormBase:CBN16202" /db_xref="WormBase:WBGene00154927" CDS complement(join(458590..458766,458875..459003, 459048..459107)) /locus_tag="CAEBREN_16202" /note="contains similarity to Pfam domain PF01187; contains similarity to Interpro domains IPR014347 (Tautomerase), IPR001398 (Macrophage migration inhibitory factor)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38624.1" /db_xref="InterPro:IPR001398" /db_xref="InterPro:IPR014347" /db_xref="PFAM:PF01187" /db_xref="WormBase:CBN16202" /db_xref="WormBase:WBGene00154927" /translation="MQILRIQTNIRSADIPEKFEQDVSYSLSVAMDLPADKFVVIVEP AVRMRIGFASKETTVAVVNFQTTRPSSRTENDTYAKKLTLVLCEQLKLDPAHIFISFD FKDAKSFATQGKTIASLYE" gene <460930..>463536 /locus_tag="CAEBREN_15341" /db_xref="WormBase:WBGene00154066" mRNA join(<460930..461047,461101..461225,461276..461352, 461412..461799,461997..462311,462872..463411, 463459..>463536) /locus_tag="CAEBREN_15341" /product="hypothetical protein" /db_xref="WormBase:CBN15341" /db_xref="WormBase:WBGene00154066" CDS join(460930..461047,461101..461225,461276..461352, 461412..461799,461997..462311,462872..463411, 463459..463536) /locus_tag="CAEBREN_15341" /note="contains similarity to Pfam domain PF01734; contains similarity to Interpro domain IPR002641 (Patatin/Phospholipase A2-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38601.1" /db_xref="InterPro:IPR002641" /db_xref="PFAM:PF01734" /db_xref="WormBase:CBN15341" /db_xref="WormBase:WBGene00154066" /translation="MSTTSTLIHRSTLPILRRRHRSVDVLSTTRPFFSSSNTQGGASA PPGSSATVTPGGAGAAAVTTSYGYISDMFKNFVSKVENPLNYLSVGTSKAIASEAVKV ESKTQIIQKSNENRVSRSEVTTKTRALVKKILLSETSTSRLTRVRDLSEHIMAFPPTR IVAAQEQRLIAELLEMVIYGTSDQLKEEARQCLTLIGVQPPPKGRGVNVLSIDGGGTR GMMGLEVLEKIEKLSGKKICELFDMVCGVSTGAIIAALLTVKGYSVAECREAYMDVSK KLFSQGKFQGSMGLILKHSYYNTNLWISILKQMIGEEVTMINTSKKLHTPRLAIISAI VNLPTIQPYVFRNYDHPAGRDSHYRGGTDHCLWTAIQASAAAPLYFSEVKLDNLLLQD GGVYANNPTAIAYHETKLLWPNEKVNCVISVGNGRTVASVEPTPTIFSTSFQDKLLRI IDSATDTEGVHMNVHDMLPESVYYRFNPYMTYAYGLDEIGQERLEQMASDAAFYVRRN SSKLESAAERLCLQPNLQQRVHRNIKEWMDLKGFYKPA" gene complement(<463848..>464811) /locus_tag="CAEBREN_14130" /db_xref="WormBase:WBGene00152855" mRNA complement(join(<463848..464681,464731..>464811)) /locus_tag="CAEBREN_14130" /product="hypothetical protein" /db_xref="WormBase:CBN14130" /db_xref="WormBase:WBGene00152855" CDS complement(join(463848..464681,464731..464811)) /locus_tag="CAEBREN_14130" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38563.1" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="WormBase:CBN14130" /db_xref="WormBase:WBGene00152855" /translation="MDEKQRLHAYRFVAYSAVTFSVVAVFSLCITLPLVYNYVDGIKT QINHEIKFCKHSARDIFAEVNHIRASPKNASRFARQAGYGTDEEVVESNQGSQGGSCS GCCLPGSAGPAGTPGKPGRPGRPGAAGLPGNPGRPPAQPCEPITPPPCKPCPQGPAGA PGAPGPQGDAGAPGAPGQGSGVGAPGPAGPKGPSGAPGQPGQAGAPGQPGADAQSEST PGAPGPAGPQGPPGPSGSPGAPGGPGQPGAPGPKGPSGAPGQPGSDGNPGAPGQPGQS GGAGEKGICPKYCAIDGGVFFEDGTRRK" assembly_gap 465630..466108 /estimated_length=479 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<470964..>476935) /locus_tag="CAEBREN_03289" /db_xref="WormBase:WBGene00142014" mRNA complement(join(<470964..471012,471058..471394, 473207..473285,473336..473483,473708..473944, 473995..474369,474414..474760,474807..475259, 475311..475730,475774..475866,475916..476145, 476189..476403,476450..476628,476675..>476935)) /locus_tag="CAEBREN_03289" /product="hypothetical protein" /db_xref="WormBase:CBN03289" /db_xref="WormBase:WBGene00142014" CDS complement(join(470964..471012,471058..471394, 473207..473285,473336..473483,473708..473944, 473995..474369,474414..474760,474807..475259, 475311..475730,475774..475866,475916..476145, 476189..476403,476450..476628,476675..476935)) /locus_tag="CAEBREN_03289" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003890 (MIF4G-like, type 3), IPR016021 (MIF4-like, type 1/2/3), IPR007193 (Up-frameshift suppressor 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38568.1" /db_xref="InterPro:IPR003890" /db_xref="InterPro:IPR007193" /db_xref="InterPro:IPR016021" /db_xref="WormBase:CBN03289" /db_xref="WormBase:WBGene00142014" /translation="MGLTVEKSWLEDVKKRVEFQESSRLKMVDIRENVLDNEKELRSL DSTLKKTTSFMKKVKLLSAASVPGLIEELSKLNLSKFVEEMASGIIETKLKLSDIPKV TELCLAISAKYSNFSEQMAGEFKKVLPVKKSDKIANVAKLRVDIIFLAELCLCGVFNE KEGLQVLGAVLSYLIQTDKTEFVNVGLLATVSRTVGWQIANIVPIPLTDDVETIEIQR GDLPSSSALSDDQKKMIRDLLNSYYDALYSKTEKTCSARNKAMKKVKRQERVRGDAAD EEKATFNQLQNELDSLQKLASEIACAIGVKMKPLNQEASDDEEDEAANLEMGRRLAEG AIKLWSDEETKAFYEDLIDLRQMVPKDLYKDSEQRTLSKATMAERIEDIDVENVNEAG AVDAKRSSMTRADSEKETSPDDSYLQQYLKEAGESSEDRGVNKWQKFVLDLDHLVSKY STDKAAEYFVSNLNNKGCRKRLVKLMIEPPPTRIDVVPFYARLIATLENVMPDLTTEI VTQLLEKFRAFLQYKPSSNSIAIKVESKMVCVMMIAELMKFGVISRAEGLSCLRQLVY DLRGHSVEMTATFMESGGLYLYRHTESHAKMKRLLEVVKAKRDRMKDQRQAMLIDNAY FTCLPPEDSKEERLRLKLDEEDTPMKRFIRHIVLDINEENVDVFLKCFRRLDWSDPEI SDYAIRYLSSTWLLPIENLQHVASAIAGLCNLQHLQWIGMAVIDATIETIRISLENPG SFNQWAHSAAVYLAELYSFELCDEDLILQVLYQIISYPEPENNWKDLHRIRMVCAVLA IVREFFHKGPGMKKLKYFISYFHRYYYTKKEAWDLETMDQQPGSGPESSENETVPDVQ TSFPYEVEIAYLDMVKLFRKKKVKHWLWPKNLKEAQEGVQRIERRFKAELKGITEEYS DQEGSPDQKDLNVIEEDDEDEDRDSDGDLDEEDSDEEQQKLYIATNTVTKEEDEDFQR ELDRMMGEGFRQSGAPVTAPQYDVTLPAAVKNRFNRNIKFAENTKVESSSNSRLYEVN DDDEPSTSHTSASGRPKQSRVTLMVRGKANKPSLKTVNIDDDELQKRWKEEKAREEEE RAEVKRLTLGQHRRIEMEEEKALLAQLNSRKNNSRKNPTRPQYPKPHLEGEW" gene complement(<477475..>480059) /locus_tag="CAEBREN_04314" /db_xref="WormBase:WBGene00143039" mRNA complement(join(<477475..478096,478148..478341, 478390..478607,478989..479047,479138..479282, 479408..479545,479607..479903,479957..>480059)) /locus_tag="CAEBREN_04314" /product="hypothetical protein" /db_xref="WormBase:CBN04314" /db_xref="WormBase:WBGene00143039" CDS complement(join(477475..478096,478148..478341, 478390..478607,478989..479047,479138..479282, 479408..479545,479607..479903,479957..480059)) /locus_tag="CAEBREN_04314" /note="contains similarity to Pfam domain PF00076; contains similarity to Interpro domains IPR000504 (RNA recognition motif, RNP-1), IPR012677 (Nucleotide-binding, alpha-beta plait)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38621.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="WormBase:CBN04314" /db_xref="WormBase:WBGene00143039" /translation="MTEETKVSIEETSATAEVSENGEETNAQVSFEAKDEPDVAQATI TSDVNSSPVPDKISSAPPKSQYVRLRGLPFNATEKDIHEFFNGLTIKRVKFVCTTGRP NGEAYVEFETKEDAGKGMENDRKEMSSRYIEIFTVPESEAELEFRPEPDGVGEENHVV RLRGIPWSCKEEDVLQFFAGLDPPPAETVIGGTGGPKSRPSGEAFVRFATQAAAEKAM EYNNRHMGTRYVEVFMSSMVEFNRAKGGGSAAGSYERTGIRPLMSLDRSDSGYGRGGS YGGYGGYDDYSRGAYGGHQDYGYSSYNQGGYGGDYGRSNDDPLRIYMRGLPYDADQYA VEAFFSPLRCHSIKLGVNETGRPSGDAIAEFDSFGDLQAGLSRNNQRMGRRYVELFDT RGAPGPMRRLLWKETSGPNVHAAPAPDPVLNGGKRAAPLPSRDTGYRAGPQAMPPRDS RDTYGPRAPTGYDREPRDVPPRGAPARAPAPAHGRADGWGSYGASAAYDTSSAAGYGH SGYDAYAGYGAAAAHSAYSSSAYGSTGSSAYGTPAASSYGSSSAATYDRQRESRDTQS AWPQQSNAYGGWGAGAGAGDRRTGY" gene complement(<482211..>485790) /locus_tag="CAEBREN_11957" /db_xref="WormBase:WBGene00150682" mRNA complement(join(<482211..482297,482390..482471, 482515..482707,482832..482934,483041..483217, 483317..483532,483788..483896,484013..484461, 484637..484864,485689..>485790)) /locus_tag="CAEBREN_11957" /product="hypothetical protein" /db_xref="WormBase:CBN11957" /db_xref="WormBase:WBGene00150682" CDS complement(join(482211..482297,482390..482471, 482515..482707,482832..482934,483041..483217, 483317..483532,483788..483896,484013..484461, 484637..484864,485689..485790)) /locus_tag="CAEBREN_11957" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR005821 (Ion transport), IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR003971 (Potassium channel, voltage dependent, Kv9), IPR003975 (Potassium channel, voltage dependent, Kv4), IPR021645 (Shal-type voltage-gated potassium channels), IPR003968 (Potassium channel, voltage dependent, Kv), IPR003131 (Potassium channel, voltage dependent, Kv, tetramerisation), IPR003091 (Voltage-dependent potassium channel), IPR013099 (Ion transport 2), IPR003974 (Potassium channel, voltage dependent, Kv3)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT38607.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR003091" /db_xref="InterPro:IPR003131" /db_xref="InterPro:IPR003968" /db_xref="InterPro:IPR003971" /db_xref="InterPro:IPR003974" /db_xref="InterPro:IPR003975" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR013099" /db_xref="InterPro:IPR021645" /db_xref="WormBase:CBN11957" /db_xref="WormBase:WBGene00150682" /translation="MASVAAWLPFARAAAIGWVPISRQPMPQAPVAIQAKDLAVDHVS DEKLAINISGRRFETWKNTLEKFPETLLGSNEKEFFYDEDTGEYFFDRDPDIFRHILT FYRTGKLHYPRHECLVAYDEELSFFGIMPDLISDCCYEDYKDKKRENQERLMEERVET AEANTAKQSLQQKMWAAFENPHTSSIALVFYYVTGFFIAVSVLCNIIETIPCWYQDNM AVTCGEAYEEQFFVVDTACVIIFTIEYFLRLFAAPDRCKFMRSIMSVIDVIAIMPYYV SLGLTNNKDVSGLFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLVFSLAM AIIIFATIMYYAEKKVESTRFTSIPSAFWYTIVTLTTLGYGDMVPSTIMGKIVGGICS LSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQKKARLARIRIVKNASGQALFNKKK AHEARMQAFEQGQLSFDALRDEDIFEIQHHHLLQCLEKATEREFVESEVMFEGGRNTP PPSETASLRGKAKRKRRLCCVSKENEEMDELDRETRVTFNQNLNQICELPKPEDVEQN QNDHRNNDKICVSQL" assembly_gap 488316..488325 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 489301..489605 /estimated_length=305 /gap_type="within scaffold" /linkage_evidence="unspecified" CONTIG join(ABEG02004557.1:1..504,gap(895),ABEG02004558.1:1..6703,gap(10), ABEG02004559.1:1..1870,gap(10),ABEG02004560.1:1..2101,gap(1415), ABEG02004561.1:1..1340,gap(11086),ABEG02004562.1:1..1240,gap(1510), ABEG02004563.1:1..8946,gap(2295),ABEG02004564.1:1..9585,gap(10), ABEG02004565.1:1..13936,gap(11963),ABEG02004566.1:1..25421,gap(10), ABEG02004567.1:1..1948,gap(8307),ABEG02004568.1:1..25931,gap(10), ABEG02004569.1:1..16835,gap(10),ABEG02004570.1:1..4136,gap(10), ABEG02004571.1:1..8940,gap(3969),ABEG02004572.1:1..9689,gap(930), ABEG02004573.1:1..34883,gap(10),ABEG02004574.1:1..14129,gap(592), ABEG02004575.1:1..1015,gap(10),ABEG02004576.1:1..1642,gap(2101), ABEG02004577.1:1..1169,gap(2453),ABEG02004578.1:1..58961,gap(10), ABEG02004579.1:1..23365,gap(344),ABEG02004580.1:1..4495,gap(8382), ABEG02004581.1:1..30748,gap(387),ABEG02004582.1:1..14647,gap(6491), ABEG02004583.1:1..32635,gap(271),ABEG02004584.1:1..1757,gap(999), ABEG02004585.1:1..6000,gap(17414),ABEG02004586.1:1..846,gap(2221), ABEG02004587.1:1..16087,gap(479),ABEG02004588.1:1..22207,gap(10), ABEG02004589.1:1..975,gap(305),ABEG02004590.1:1..1523) //