LOCUS       GL379948              172748 bp    DNA     linear   CON 13-MAR-2015
DEFINITION  Caenorhabditis brenneri unplaced genomic scaffold Scfld02_162,
            whole genome shotgun sequence.
ACCESSION   GL379948 ABEG02000000
VERSION     GL379948.1
DBLINK      BioProject: PRJNA20035
            BioSample: SAMN02953693
KEYWORDS    WGS.
SOURCE      Caenorhabditis brenneri
  ORGANISM  Caenorhabditis brenneri
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 172748)
  AUTHORS   Wilson,R.K.
  CONSRTM   The Caenorhabditis brenneri Sequencing and Analysis Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2010) Genome Sequencing Center, Washington
            University School of Medicine, 4444 Forest Park Parkway, St. Louis,
            MO 63108, USA
REFERENCE   2  (bases 1 to 172748)
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JUL-2011) Genome Sequencing Center, Washington
            University School of Medicine, 4444 Forest Park Parkway, St. Louis,
            MO 63108, USA
  REMARK    Annotation update by submitter
COMMENT     The organism is Caenorhabditis brenneri Sudhaus & Kiontke, 2007;
            strain PB2801. This strain is derived from the wild isolate LKC28.
            It was inbred in Scott Baird's laboratory for 20 generations by
            transferring one gravid female per generation.  The strain LKC28
            was established from worms collected by Hernan Ruiz in 2003 from
            roots of Liriope (Convallariaceae) grown in a nursery in Costa Rica
            (Provinciade Alajuela) (Sudhaus & Kiontke 2007).  LKC28 and three
            other strains of C. brenneri were described in Sudhaus & Kiontke,
            2007.
            Annotation was added to the scaffolds in July 2011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: PCAP v. 9/3/04
            Assembly Name         :: C_brenneri-6.0.1
            Genome Coverage       :: 9.5x
            Sequencing Technology :: ABI
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..172748
                     /organism="Caenorhabditis brenneri"
                     /mol_type="genomic DNA"
                     /submitter_seqid="Scfld02_162"
                     /strain="PB2801"
                     /db_xref="taxon:135651"
                     /chromosome="Unknown"
     gene            complement(<159..>4511)
                     /locus_tag="CAEBREN_28429"
                     /db_xref="WormBase:WBGene00190394"
     mRNA            complement(join(<159..308,1423..1941,2998..3375,
                     4295..4399,4446..>4511))
                     /locus_tag="CAEBREN_28429"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN28429"
                     /db_xref="WormBase:WBGene00190394"
     CDS             complement(join(159..308,1423..1941,2998..3375,4295..4399,
                     4446..4511))
                     /locus_tag="CAEBREN_28429"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37723.1"
                     /db_xref="WormBase:CBN28429"
                     /db_xref="WormBase:WBGene00190394"
                     /translation="MVDKGILQQKYYHGLLPREDISEMLHKPGEYLIRTSEPVKGQPR
                     QFVLSAVGEKQSDANHFVIRESKDHQVFVDKQGFPTIIELVNHYVTTKEPFYTTKKDV
                     KVVMKHAVERQKWELSHEDVDMQKKLGEGAFGEVWKGKLLKILDPSGQPVPVAVKTAK
                     LEAMNKEQIKELMREARLMRNLDHINVVKFYGVAAGQEPLYVIMELADGGALDSALAK
                     QHFPIIKKYEMILQAASGLAYIHASNLIHRDVAARNCLYGGGQVKIADFGLTREGPSY
                     SMDLKKKVPIRWLPPETISGGLYVYKTDVFAFGIMAWEITEDGKEPYPGMKVLEVAMK
                     VMQDYRMSFNAEVNAEFASYILAHCWCKSHEERFTMDKIVKWLRTFVKGQGGNPGKSG
                     VSTPLSKNKVWYY"
     gene            <5591..>10076
                     /locus_tag="CAEBREN_25276"
                     /db_xref="WormBase:WBGene00164001"
     mRNA            join(<5591..5636,5685..5779,5828..6410,6458..7150,
                     7199..8179,8226..9307,9355..9681,9729..>10076)
                     /locus_tag="CAEBREN_25276"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN25276"
                     /db_xref="WormBase:WBGene00164001"
     CDS             join(5591..5636,5685..5779,5828..6410,6458..7150,
                     7199..8179,8226..9307,9355..9681,9729..10076)
                     /locus_tag="CAEBREN_25276"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37718.1"
                     /db_xref="WormBase:CBN25276"
                     /db_xref="WormBase:WBGene00164001"
                     /translation="MGPKLATVSLVLLTLFANSLQSPPSSSTIECPPYHNGSIAGNSC
                     NQEYFKCVNGVRQAATCSEGNVFFEDGCIPAEQSPECQIADDTEDEPYEQFDCLSRPD
                     GLHSVGCTNSFVNCVAGQAYEMYCPDDLVFNAKTSECQETCDDDDESQDDAAITATTT
                     PSPSVYPGEDDGEGYDEGSGETEGYYEPQATTEEPDTVDFDCSGLDNGNYADGCSDVF
                     YTCANGVAFRSVCPQGTVYNSNQNACDYDCTAATTTTTTPSYVPTTTTAAPTTQADEP
                     KYTSTPQDDSWKTTTSGWEESTTTSGWETTATTPGFDDVTTTRAPIVCQEGQVTSFGM
                     CSSRFNRCQNNAVRAKQCPVNTLFESSLVMCVFDLPQCLPVTIPPTPTYNSNGYASYG
                     PPADTIVSPFDENVRLKPKFDRRRKYHHGPIQRPGYGNSYGNAPSYGNTVLENPFFIP
                     RHHPYRHRGGYRHRGHRRPHYGPHVDSPFFTRFHGRAALNDQFKDHRRVRMGKINYEA
                     RDVVGNKRFLMDDGFDGRKARFLTSDIQQVFPEARHSKRRLGPREDPDGYKDDKTFAA
                     KDLFGATRRKRSAYYGAQQYGQQQYTQITARQAQVNKDCQQYTTPTFLTFGDCFDQFI
                     YCSGNGLNRMAACPVGETFNKALRACSEICGVVAPVATSTAATQTGDDSTWSATTTGS
                     WSSNDDVTTFTTSAPSSFESYTTTQSSWNDESMTTQSSWNADEDVSTNSYGTPSEDAT
                     TKAPVGDQCSYVSSGLFAIGCSQKYIQCSHGAAMVRQCPASLYFNQESQTCTFRDKVK
                     DCQSTDNDSVYSTPGQDQTTTSGYGNGYGASDDSTTTSGYGNNYGPSDDQTTTSGYRG
                     GYGSSNDQTTTSGYKTNYGESNDQPSTTTSGYGLPSDDQTSTTSGYENTYEPSEDQPT
                     TYQPSPAPYKPSVSEDQQDEPVNACTGLSDGSHGQGCSSSYIICKYGRLVKSLICPLG
                     EGYDPSVQMCRTFSQIPAQACDQQETTTDSGLVQTLPYQTLADVLSTTTTTTVGYDEE
                     TTDSYMTVPSDDSTTTTASYGEEETSDAPYDEYTTTTTPAADATTTTTDSYNRGAYDV
                     IEEEEEDVGYEQKCIAGSRASKGFCVQEYLECTSTGFVEKSCRVGKLFDSHSNRCVAR
                     ISCGKEAIRDAIKDVIATTTAAPSKLDGRCAHVEGDAKFALSACHDVYLLCSHGAAQL
                     QKCGRNLVFSNAKLECVSRESSYECNMASNQPVKSYYNHHGQSAFCDGKADGLYGNKK
                     DCSAILQCFGGDLFEHSSCPSNLAFNDVTGTCDYPQKVSGCENHGRTEGVCTEHGSFI
                     ADVDDCKVFYRCVWGRKVVMKCPSGTVFNPLLSVCDWPSAVPSCSGGSSSPYGTSSSN
                     DDNSGY"
     assembly_gap    16771..16780
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    19994..20003
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            <21222..>29747
                     /locus_tag="CAEBREN_22200"
                     /db_xref="WormBase:WBGene00160925"
     mRNA            join(<21222..21787,23144..23306,23354..23566,24336..24491,
                     24612..24674,24836..24893,25853..26080,27121..27239,
                     29568..>29747)
                     /locus_tag="CAEBREN_22200"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN22200"
                     /db_xref="WormBase:WBGene00160925"
     CDS             join(21222..21787,23144..23306,23354..23566,24336..24491,
                     24612..24674,24836..24893,25853..26080,27121..27239,
                     29568..29747)
                     /locus_tag="CAEBREN_22200"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37732.1"
                     /db_xref="WormBase:CBN22200"
                     /db_xref="WormBase:WBGene00160925"
                     /translation="MSQFQLEQTSVIKTAPPGGRQLEFPKNEPLDIASNIQDLTKMQT
                     LDNYYQNPIPVQSYHRMYETYQTQPLISTQAAQNFYYTNTAILSNNLQPQPDWGRQMD
                     TSAYSNSAYSNQRSSTSQQYQQISENERIVYKGSDMPSPVDSGIGQEILLTNTKEEFF
                     TSADGSSMLERSSERTLSHRDSPLIIPKIHNNLGFQYVLEAPISTSVRRDDDRMTYVN
                     KGQFYTVSLDYIPDITKCLKNQTVKSQLMVVFREDKTYEEEIKTWQSWHARQHVSKQR
                     ILEVDSKNSSGMIGQIEEIGNNAVQFYWNPSDQNGGVKISIAVQCLSTDFSTQKGVKG
                     LPLHIQIDTYDGENDKVPFHRGYCQIKVFCDKGAERKLRDEDKRAAKRKLQGTGANRK
                     MLHENRRDEKRRMQEFASAGALSGGRKKSDGEYHEQCERSEFYHMRELDKPAALFIAP
                     EEFDNRYVDSTSLSFDMSEIEPIAKRPRTSERIMLYVRKRDEQIYQPLHVVPSSLAGL
                     ALAIANKFGADPEKMSGVYKRCAKGITVKVDDEMLRLYCNEDTFIIDVEHAADGSTAA
                     TLIEAPTNQNAYSNS"
     gene            complement(<34705..>36308)
                     /locus_tag="CAEBREN_13944"
                     /db_xref="WormBase:WBGene00152669"
     mRNA            complement(join(<34705..35040,36243..>36308))
                     /locus_tag="CAEBREN_13944"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN13944"
                     /db_xref="WormBase:WBGene00152669"
     CDS             complement(join(34705..35040,36243..36308))
                     /locus_tag="CAEBREN_13944"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37728.1"
                     /db_xref="WormBase:CBN13944"
                     /db_xref="WormBase:WBGene00152669"
                     /translation="MTSRKLLVVLKPEIVAHRVLAQVALTELQKNGVEIEEMRKMRIN
                     EAMARQLYSQHEGKFFYNRLVRHISSGEVIAMRVNGNARKCIGTSRLWPRKELTEQPI
                     RHRLALSDTRNVAHASDEDVAEKELELFRLL"
     gene            complement(<36671..>54418)
                     /locus_tag="CAEBREN_12441"
                     /db_xref="WormBase:WBGene00151166"
     mRNA            complement(join(<36671..36793,38236..38418,42343..42522,
                     43524..43751,44019..44273,46615..46809,47258..47458,
                     49050..49397,50097..50271,51174..51542,54408..>54418))
                     /locus_tag="CAEBREN_12441"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN12441"
                     /db_xref="WormBase:WBGene00151166"
     CDS             complement(join(36671..36793,38236..38418,42343..42522,
                     43524..43751,44019..44273,46615..46809,47258..47458,
                     49050..49397,50097..50271,51174..51542,54408..54418))
                     /locus_tag="CAEBREN_12441"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37730.1"
                     /db_xref="WormBase:CBN12441"
                     /db_xref="WormBase:WBGene00151166"
                     /translation="MRKRIEKRPNPTAVSDLIGSHVTRIAAGACHTIAIIKGAPYPFG
                     LNSSGQLGNGKILTQSTPRKTDDLDHVTSVFAGYQQTFFIRSSGSIEQNEIVGPSCPV
                     KFPSKIDREIFDKVKDSGEKLDIMALLETVFSSLSSINNSFLYKDDRRFNVSADRSHG
                     IDLDQVMETFMLFDESSNKKQYLDLITDSLSIAFSSWTPRVISVEGMRLFLILPWLPV
                     FTENVTTDTLIRAHTPLVDAMCSVHETMGKVLENWWCHLSTRHFRRMVTVFKTAVVTL
                     MHAGKTPFNCQKYLHLLQKLFMINKSYHIIPIETFYINEIAQTICLKQDYYNMVTKQE
                     PHKTEKDYWTYYPFLLNGAAKGEILFVDSCLMQTIHSQQAIYQSFGEENQSEVFSEAE
                     REAHLRNIQSCYLEVRREFIVMDTMNKLPTLSDQDLRKPLKVKIMGEEADDAGGVRKE
                     FFLIVMRKILQPAYGMFSEDEESHLVWFSGLPAEFCEREQFHQLGRLVALAIYNFTIV
                     PFPFPLALYKYLLDTPPTLEDLMELSPTEGKSLQSLLDYEGDDVEEVFGLTFSMTINV
                     FGEAETVELQPGGEEIPVTNRNRDEYVHLYVRHRLELGHNNAIAEQAKQFRKGFCDVL
                     HSRVLRYFQPRELMELVVGNENYDWNEFRDLMVYKGDYTSSHPAVKTFWKAFFALEED
                     ERKKFLQFLSGSTRLPVAGMKELNPVIQPSSPESLPVAHTCFNLLDLPNLTDVTEMLR
                     RLRISIEHTEGFTLV"
     gene            <56404..>60021
                     /locus_tag="CAEBREN_07942"
                     /db_xref="WormBase:WBGene00146667"
     mRNA            join(<56404..56585,58467..58950,59863..>60021)
                     /locus_tag="CAEBREN_07942"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN07942"
                     /db_xref="WormBase:WBGene00146667"
     CDS             join(56404..56585,58467..58950,59863..60021)
                     /locus_tag="CAEBREN_07942"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37716.1"
                     /db_xref="WormBase:CBN07942"
                     /db_xref="WormBase:WBGene00146667"
                     /translation="MFDKLLTCGVVSAALRGEYLIARSIIRHKQPEWTENKTRLFAVR
                     VVSFTHALVSALGCIFSLLTDVNYVREPYDYHKANAEYVFLFSMGYFIYDLLDMWIHG
                     ELESSKEYLVHHSLVITAFSIILFSGRLFGLAMIALLVEVQTVFLHLRTMVRLVYGSK
                     HMPASIDVLINANMICLFLFRHLPVCYLLFYLLAQDVKVPILLKMFLVGGLTFLEYHN
                     THLTIAMAKSDGFFGHERQALDEDSCDPLGSLKKEEEQKTTEKKSERSTRTAKKID"
     gene            complement(<61090..>63164)
                     /locus_tag="CAEBREN_08326"
                     /db_xref="WormBase:WBGene00147051"
     mRNA            complement(join(<61090..61144,61330..61480,61800..61997,
                     63110..>63164))
                     /locus_tag="CAEBREN_08326"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN08326"
                     /db_xref="WormBase:WBGene00147051"
     CDS             complement(join(61090..61144,61330..61480,61800..61997,
                     63110..63164))
                     /locus_tag="CAEBREN_08326"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37734.1"
                     /db_xref="WormBase:CBN08326"
                     /db_xref="WormBase:WBGene00147051"
                     /translation="MDFFHFGRKKEKELDFGATGRVYVWGEQADGRCLHHPLLIEELN
                     AIPIVRVLAGARHCVAISASGAVFTWGQNNSGELGMDDFRPQTSVHHINHMDGLGVVE
                     AACGDNHTVLLTNSGRTFSFGSDALGQCGFGKKSVFLGSKAAVTTVTHMS"
     gene            <63357..>63636
                     /locus_tag="CAEBREN_07449"
                     /db_xref="WormBase:WBGene00146174"
     mRNA            join(<63357..63445,63492..>63636)
                     /locus_tag="CAEBREN_07449"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN07449"
                     /db_xref="WormBase:WBGene00146174"
     CDS             join(63357..63445,63492..63636)
                     /locus_tag="CAEBREN_07449"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37719.1"
                     /db_xref="WormBase:CBN07449"
                     /db_xref="WormBase:WBGene00146174"
                     /translation="MRFFVVFTSMIAASSAFLFPSAGGGGGCGCAPPPPPACAPPPAP
                     ACGGGAPPPPPAYAAPAPSYAAPAGGAYAVGGR"
     gene            <65797..>66085
                     /locus_tag="CAEBREN_04652"
                     /db_xref="WormBase:WBGene00143377"
     mRNA            join(<65797..65885,65932..>66085)
                     /locus_tag="CAEBREN_04652"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN04652"
                     /db_xref="WormBase:WBGene00143377"
     CDS             join(65797..65885,65932..66085)
                     /locus_tag="CAEBREN_04652"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37727.1"
                     /db_xref="WormBase:CBN04652"
                     /db_xref="WormBase:WBGene00143377"
                     /translation="MRFFVVFTSMIAASSAFLFPSAGGGGGCGCAPPPPPACAPPPAP
                     ACGGGAPPPPPPPPAYAAPAPSYAAPAGGAYPVGGR"
     gene            <67101..>70649
                     /locus_tag="CAEBREN_00818"
                     /db_xref="WormBase:WBGene00139543"
     mRNA            join(<67101..67111,67914..68214,68525..69397,69648..69863,
                     70482..>70649)
                     /locus_tag="CAEBREN_00818"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN00818"
                     /db_xref="WormBase:WBGene00139543"
     CDS             join(67101..67111,67914..68214,68525..69397,69648..69863,
                     70482..70649)
                     /locus_tag="CAEBREN_00818"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37729.1"
                     /db_xref="WormBase:CBN00818"
                     /db_xref="WormBase:WBGene00139543"
                     /translation="MGLLPFVNTKKSKNTKKTARKTKKGGASEATKEENPDKPHEKPE
                     KKKGAATKKRGDNRGSKEQQPSTAAPSVKHRKEKPSKNKKKKHGTVETTVEEGQGQQT
                     LNAASIPAAPESPATVPPGQPGLITVGTEDENTTTVKAPQAALVTPPAVDPCMTPEPS
                     SLKPKVVAAPHDKSIKAVAANSALTPNSTVSQADKWPAEETAKAWLDKVSFEKTKQEF
                     DKIQAMAVVNVANECKKWKANGKLNQSADDYPALDANLATVENVYVNMSKIELPPTLR
                     SMFIGQIPVKGNEESFWKVIFDKRITSMQIIALPGEPIDFFPTQSGVHVYHGTMFVNN
                     RRVETVNEDVHRFAIEVLPDGCSNSIICNITIIRNWNIDSVHAKQAIVIKECIDLINF
                     LVAQSKDDNAIVVSKHGAGRAGYLVALAVAIQSMDKKTEPSIYDIVKGIRAQRPKAVE
                     SVTQYASIYTSMFYYIKKKIARTDGGSVDKKTIAESTDPICKKSITLTTLFANALIAE
                     VNAGGGRSTMTMLK"
     gene            complement(<71138..>73034)
                     /locus_tag="CAEBREN_23111"
                     /db_xref="WormBase:WBGene00161836"
     mRNA            complement(join(<71138..71146,71660..71859,72941..>73034))
                     /locus_tag="CAEBREN_23111"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN23111"
                     /db_xref="WormBase:WBGene00161836"
     CDS             complement(join(71138..71146,71660..71859,72941..73034))
                     /locus_tag="CAEBREN_23111"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37721.1"
                     /db_xref="WormBase:CBN23111"
                     /db_xref="WormBase:WBGene00161836"
                     /translation="MHAELLGCGQTGEGQLGARLTEPMIRVPERIIGAPNDAEGTTVK
                     QVACGENHTLFLTNDGKMWSVGSNRDGQLGRGKRSEGSFSIYPVSLTSGVGIIQLL"
     gene            complement(<73332..>76767)
                     /locus_tag="CAEBREN_06182"
                     /db_xref="WormBase:WBGene00144907"
     mRNA            complement(join(<73332..73631,74383..74400,74806..75220,
                     76586..>76767))
                     /locus_tag="CAEBREN_06182"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN06182"
                     /db_xref="WormBase:WBGene00144907"
     CDS             complement(join(73332..73631,74383..74400,74806..75220,
                     76586..76767))
                     /locus_tag="CAEBREN_06182"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37735.1"
                     /db_xref="WormBase:CBN06182"
                     /db_xref="WormBase:WBGene00144907"
                     /translation="MRITPHLQDTGGFFVALIEKVSDINYDPAAASGPAWKKKKMFKD
                     EPFTFLKEDDERWHDIRNHYGVDETFQYQNLFSRRLETNDANSRQLFYANDAIKNFVK
                     ENMAKVSIQNAGMKMFSRTEGKVENTRFRLSQEGIRYLFKFMNKQKVKIGAEDMLYML
                     KSEENLVPLEKLECKGDVRKQQNGTVVVYCDEDEPVCTWQKICKRVGYHTIAPYISKE
                     ERLHLLRMMGVDCAEIELLMKSKRKEKAAQDREAAWSRKQEEEAAKGGSEPSTSAAGA
                     PEEAPGPSDAPGSESAENPENIQEMASE"
     gene            <76987..>79113
                     /locus_tag="CAEBREN_17806"
                     /db_xref="WormBase:WBGene00156531"
     mRNA            join(<76987..77054,77100..77326,78020..78276,78471..78784,
                     78840..>79113)
                     /locus_tag="CAEBREN_17806"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN17806"
                     /db_xref="WormBase:WBGene00156531"
     CDS             join(76987..77054,77100..77326,78020..78276,78471..78784,
                     78840..79113)
                     /locus_tag="CAEBREN_17806"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37731.1"
                     /db_xref="WormBase:CBN17806"
                     /db_xref="WormBase:WBGene00156531"
                     /translation="MANENKDEEKDPMDTVRFKPGKHFGPWIIEKTLDEGGFGQVYLV
                     KTKDGKRAALKAESNEVEGGSAIKLESLILKKLNKNGPMPHVPELFMAAKRKKYCYMI
                     MTLLGDNLKSLKVKRPKERFTRGTWSRVGIQCLYALKYMHDCGFVHRDIKPQNFMLGN
                     EEDKERARIVHILDFGLARSFAKYCETTKTWSARRARGTAEFRGTLRYTSPNVHLRKE
                     QGRVDDVWSLLFVLIELNGGLPWQSCQKREEVEAMKIGMTDRNVMLNMPTCMGGIIPH
                     LRTLDYYQRPDYHLVFRAMWQVMLNEGQTPSSRFDWETKDPDPSVGPADWENSDGRFF
                     KLDSIGISGPPAFDKGAGESTHADEKSDKIESLNPVKQPRKSEKR"
     gene            complement(<79226..>85864)
                     /locus_tag="CAEBREN_18820"
                     /db_xref="WormBase:WBGene00157545"
     mRNA            complement(join(<79226..79355,80713..81310,83559..83908,
                     85620..>85864))
                     /locus_tag="CAEBREN_18820"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN18820"
                     /db_xref="WormBase:WBGene00157545"
     CDS             complement(join(79226..79355,80713..81310,83559..83908,
                     85620..85864))
                     /locus_tag="CAEBREN_18820"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37733.1"
                     /db_xref="WormBase:CBN18820"
                     /db_xref="WormBase:WBGene00157545"
                     /translation="MVHSSRRRIGNKKKGHEPRPNTWRDDRDAPGNQGYREVLKENEK
                     YWQFYKEQNVFPLEQFDEFRAALQRDLPVSFRFQGCHKDREQLIHEMENRFFGKIMEA
                     GDTAVCVPKSLPWYKEAYQTPMSRTAVRSHPILAQLHNFLVTEAELGNLSRQEAVSMI
                     PPLLLAPTSDHYVLDLCAAPGSKTTQLLEMIHENDENPKGMVIANDVDMKRCYMLIHH
                     TLKRFRTAACAVTCEDAARFPQIADNDGGLIQFDRVLADVICSGDGTLRKNPEIWKKW
                     TPQDALGLHRMQIAIARKGAQQLKVGGRMVYSTCSMNPIEDEAVVAQLLRDSKGSLRL
                     MDTSTLLPELKRENGVTSWKVFDRDMKLYTSTEDVTEEKMKKVIVNSLFPPTEEEARE
                     MNLHFTSGSFNQIAMKPGQINQKSQRSGVQIVPFVASPFWGFSRQNQD"
     assembly_gap    82280..82658
                     /estimated_length=379
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            complement(<87522..>93142)
                     /locus_tag="CAEBREN_04117"
                     /db_xref="WormBase:WBGene00142842"
     mRNA            complement(join(<87522..87796,88584..88794,89386..89978,
                     90351..91765,92373..92644,92696..92950,92999..>93142))
                     /locus_tag="CAEBREN_04117"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN04117"
                     /db_xref="WormBase:WBGene00142842"
     CDS             complement(join(87522..87796,88584..88794,89386..89978,
                     90351..91765,92373..92644,92696..92950,92999..93142))
                     /locus_tag="CAEBREN_04117"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37736.1"
                     /db_xref="WormBase:CBN04117"
                     /db_xref="WormBase:WBGene00142842"
                     /translation="MDDFDDHYSKSGGETLTFVDTDECGMSAATQDSQFYDNQFSVPT
                     QSSQVTDFLPGVDATSELTFHDVEDESEDEKSLTDDQQKLPEHACKYCGISDPLCVAK
                     CTVCNKWFCNSNDGTPGGHIVHHMVRSQHKEAYTHKDSPCGDTQLECYRCGSKNVFNL
                     GFIPGKKDQVVVIICRTPCANLAFQNDDNWSPEDWKSVIAEKQLLSWIVNTPSEEQVA
                     RARKITAAQAVRLEELWREHPDATLDDLNKPGLDREPDHVQLKYTDAHHYSKIFRPLV
                     AIEAEYDRRMKEQASQAVGTVRWEQGLRGSVCAFFHLPQFADGVMKLAKGDELRLKHN
                     QTVDGSEWAKVGNVFKIPDNHSEEIGIEIRGQVDRSVQESRIMFTVDVVWNATTFDRQ
                     YRALQALQTDNQSVSPYLYAKLLGKPVDELMLKFELPRRLSAPGLPDLNSSQMQAVKQ
                     VLTRPLSLIQGPPGTGKTVVSATIVYHLVKKTEGNVLVCSPSNIAVDHLAEKIHKTGL
                     KVVRLTAKSREHTDTTIPYLTLQHQLKVMAGPELRKLIQLKEEIGELEAKDDIRYSQL
                     KRVKEHDLLAAADVICCTCSSAADARLTKIRTRTVLIDESTQATEPEILVSIVRGVRQ
                     LVLVGDHCQLGPVVICKKAAMAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSN
                     AFYDGSLQNGVTENDRYMKGVDWHWPTHNKPAFFWHCSGAEELSASGTSFLNRTEAAN
                     VEKLVSKLIKGGVQPLQIGVITPYEGQRSFIVNYMHTQGTLNSKLYESVEIASVDAFQ
                     GREKDYIIVTCVRSNDALGIGFLSDPRRLNVAITRAKYGMVVVGNAKVLSRHELWYEL
                     INHFKKKDMLYEGPISALKPLNMTIPKPVLKAKNNIAGNTNRFGIKRMQYTYNEYKAS
                     DPSVPRLPPTYANSQNLLSMSKLARNFNQNTPVPAHMLDPLVYGHRSQKDRRREQHRQ
                     RAEAAMDFSQDISQSQYGGPSQSQYNDGASLSGWSQSQTAVVNGNSKNRNRPQYQGNT
                     QQMSQDMDEVEQKMVDLLLMSQDC"
     gene            <94421..>104412
                     /locus_tag="CAEBREN_16346"
                     /db_xref="WormBase:WBGene00155071"
     mRNA            join(<94421..94485,94609..94852,96928..97215,99716..99942,
                     102036..102810,104008..>104412)
                     /locus_tag="CAEBREN_16346"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN16346"
                     /db_xref="WormBase:WBGene00155071"
     CDS             join(94421..94485,94609..94852,96928..97215,99716..99942,
                     102036..102810,104008..104412)
                     /locus_tag="CAEBREN_16346"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37726.1"
                     /db_xref="WormBase:CBN16346"
                     /db_xref="WormBase:WBGene00155071"
                     /translation="MTILSKLSQISVKSLVQTSRTSYQTARWLHKPISRTTILKTWRL
                     CGFGTGLAAVTFRKATCAPKLSSKRIDHLRKEDEQASMTLWELWQLIKPFFGWFFAAI
                     VCAILSAYINIQIPLCLGDLVNGIVEIIKDESKNLRSHFDQLKPAAAHLMTMYVVQSA
                     LTFLYITFLTILGERMATKMRSDLFKKLLHHDMAFFDAHKTGELSARLNADVQEFKSS
                     FKLCVSQGLRTFAQTIGCIGSLYFLSPTMTGYTVAVVPGIIMAGSLIGAGLRQLSRRA
                     QAQSATASAVSDEALTNMRTIRAFAMEKLESRLFDAEIDKARSMQEQLGVGIGLFQAG
                     TNLFLNGMILSVLYGGSNLISKGEMTPGALMSFLVSAQTIQRSLSQLSVIFGTAIKGW
                     TAGGRALQFARLEPSIPIDTGVCIPYHSLWGDIKFEDVSFSYPTRPGHAVFENLTLTI
                     PAGQVVALCGPSGEGKSTITHLLERFYEPKSGRITLDGRDLKELNVEWLRGQVIGLIS
                     QEPVLFATSVEENIRYGRPDATDEEVREAARAAHVDEFVSRFPAGYGTIVGERGAQLS
                     GGQKQRIAIARAILKNPPILILDEATSALDSHSEQLVQEALNTVMKGRTVLVIAHRLS
                     TIRSAQLIYVIKDRKALESGTHEQLMAKKGSLYRRLVEAHNVE"
     assembly_gap    96171..96180
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            <111447..>116681
                     /locus_tag="CAEBREN_07763"
                     /db_xref="WormBase:WBGene00146488"
     mRNA            join(<111447..111574,112093..112215,112775..112880,
                     112928..113019,113388..113530,114816..114995,
                     115168..115295,116562..>116681)
                     /locus_tag="CAEBREN_07763"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN07763"
                     /db_xref="WormBase:WBGene00146488"
     CDS             join(111447..111574,112093..112215,112775..112880,
                     112928..113019,113388..113530,114816..114995,
                     115168..115295,116562..116681)
                     /locus_tag="CAEBREN_07763"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37737.1"
                     /db_xref="WormBase:CBN07763"
                     /db_xref="WormBase:WBGene00146488"
                     /translation="METSTWDALNNSIKELSAEEQQAIRNVLEKDLEFQHAEQNRIRS
                     LSTCVAIKKTSVQEKRRASSVAGSESSESGLSSPGNVSHGRTSPLPKWNNRVCSICQC
                     TLGYILNSGTKCKKCATALCDKCAHSVISGTSQNPQKYSLCTVCYSERELSAAKNEWV
                     QGSDEAEKTSEKLLNAMKISEKRMSVQIPATPPAITKGKAPYKRNLTLPAIQTNFLSV
                     PDEAPGVIQSAGGNSNFSPKFWGGSPSPRSPRSFSSANSSNMSINSPAPNDSLRALHP
                     REPIGSPAPRPMSSTPLTGVPEDSTIQIPTVERRRSAFEGSRRSGKLRRQSEATVPTF
                     QLSMC"
     gene            <119446..>119959
                     /locus_tag="CAEBREN_07538"
                     /db_xref="WormBase:WBGene00146263"
     mRNA            join(<119446..119550,119629..119721,119769..119853,
                     119904..>119959)
                     /locus_tag="CAEBREN_07538"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN07538"
                     /db_xref="WormBase:WBGene00146263"
     CDS             join(119446..119550,119629..119721,119769..119853,
                     119904..119959)
                     /locus_tag="CAEBREN_07538"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37725.1"
                     /db_xref="WormBase:CBN07538"
                     /db_xref="WormBase:WBGene00146263"
                     /translation="MEFRRKCSKSAMRHKSQKRKTSPNQDVEKMNEIFKFPRISEAAL
                     MDGSLKICCVVSFKKGNQRCFEGSISVKELCGLRNGTKVFKFIELANIRLYSIDEEEE
                     MPEYDWIISV"
     gene            complement(<122246..>123527)
                     /locus_tag="CAEBREN_25755"
                     /db_xref="WormBase:WBGene00164480"
     mRNA            complement(join(<122246..122439,123416..>123527))
                     /locus_tag="CAEBREN_25755"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN25755"
                     /db_xref="WormBase:WBGene00164480"
     CDS             complement(join(122246..122439,123416..123527))
                     /locus_tag="CAEBREN_25755"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37717.1"
                     /db_xref="WormBase:CBN25755"
                     /db_xref="WormBase:WBGene00164480"
                     /translation="MALDDVARVRCLRNRTAAFEKRNEVHKSLQRIFEITFYCGHTIC
                     RTCALIMACPTGLAQPNRARIQILSCPVCRQDGHFNPQHVQRNYACLPGYVRPRPNN"
     assembly_gap    130501..131500
                     /estimated_length=1000
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            <133040..>133866
                     /locus_tag="CAEBREN_25635"
                     /db_xref="WormBase:WBGene00164360"
     mRNA            join(<133040..133285,133330..133665,133738..>133866)
                     /locus_tag="CAEBREN_25635"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN25635"
                     /db_xref="WormBase:WBGene00164360"
     CDS             join(133040..133285,133330..133665,133738..133866)
                     /locus_tag="CAEBREN_25635"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37720.1"
                     /db_xref="WormBase:CBN25635"
                     /db_xref="WormBase:WBGene00164360"
                     /translation="MAPSKNARTGTRLLESRRRAALRRSEQLAALASRLERVIMARKI
                     EEIVEEVVWRGENNWPADSINFARSLEHWAVPSSWTWIGSMNTEYMGVTAQLFEDQNG
                     LPHRLSSSSIGTRLLEARRSAALRICHTKMATVIRLERMLMARRIASIRKEIVWHEER
                     QCLQQRGRQTTTSSTTSTTITADQLYYDRLQWGITYSAQSDNAPETHTRENTLHVTPR
                     TQEVESPVWDNNDPYLVI"
     gene            <159804..>159905
                     /locus_tag="CAEBREN_30154"
                     /db_xref="WormBase:WBGene00192119"
     mRNA            <159804..>159905
                     /locus_tag="CAEBREN_30154"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN30154"
                     /db_xref="WormBase:WBGene00192119"
     CDS             159804..159905
                     /locus_tag="CAEBREN_30154"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37722.1"
                     /db_xref="WormBase:CBN30154"
                     /db_xref="WormBase:WBGene00192119"
                     /translation="MSDDVNNSATSSTVHFDDTPFEEVYDIETELGR"
     assembly_gap    164017..165016
                     /estimated_length=1000
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            <165986..>167585
                     /locus_tag="CAEBREN_30411"
                     /db_xref="WormBase:WBGene00192376"
     mRNA            join(<165986..166468,167460..>167585)
                     /locus_tag="CAEBREN_30411"
                     /product="hypothetical protein"
                     /db_xref="WormBase:CBN30411"
                     /db_xref="WormBase:WBGene00192376"
     CDS             join(165986..166468,167460..167585)
                     /locus_tag="CAEBREN_30411"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EGT37724.1"
                     /db_xref="WormBase:CBN30411"
                     /db_xref="WormBase:WBGene00192376"
                     /translation="MVMLKASKNSRNIGDGRFDEEDLVASCMLICAEEGNLRALHKLS
                     ALHKLNPNAIRRSPTSEPPGTTPMHCAAKYGHAEVFNYLHMKGGNICARDENGDTPLH
                     VACRFAQHTVAGYVANEKVDVDSINMKGETALHCAVESADTRVVRLLLSLRPRLDLPN
                     ASGDTVLHLAADSINPRIVPLLVCLSPPLHLRNIVSRLSFFG"
CONTIG      join(ABEG02004387.1:1..16770,gap(10),ABEG02004388.1:1..3213,
            gap(10),ABEG02004389.1:1..62276,gap(379),ABEG02004390.1:1..13512,
            gap(10),ABEG02004391.1:1..34320,gap(1000),ABEG02004392.1:1..32516,
            gap(1000),ABEG02004393.1:1..7732)
//