LOCUS GL379918 432738 bp DNA linear CON 13-MAR-2015 DEFINITION Caenorhabditis brenneri unplaced genomic scaffold Scfld02_132, whole genome shotgun sequence. ACCESSION GL379918 ABEG02000000 VERSION GL379918.1 DBLINK BioProject: PRJNA20035 BioSample: SAMN02953693 KEYWORDS WGS. SOURCE Caenorhabditis brenneri ORGANISM Caenorhabditis brenneri Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 432738) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis brenneri Sequencing and Analysis Consortium TITLE Direct Submission JOURNAL Submitted (21-JUL-2010) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA REFERENCE 2 (bases 1 to 432738) CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (28-JUL-2011) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA REMARK Annotation update by submitter COMMENT The organism is Caenorhabditis brenneri Sudhaus & Kiontke, 2007; strain PB2801. This strain is derived from the wild isolate LKC28. It was inbred in Scott Baird's laboratory for 20 generations by transferring one gravid female per generation. The strain LKC28 was established from worms collected by Hernan Ruiz in 2003 from roots of Liriope (Convallariaceae) grown in a nursery in Costa Rica (Provinciade Alajuela) (Sudhaus & Kiontke 2007). LKC28 and three other strains of C. brenneri were described in Sudhaus & Kiontke, 2007. Annotation was added to the scaffolds in July 2011. ##Genome-Assembly-Data-START## Assembly Method :: PCAP v. 9/3/04 Assembly Name :: C_brenneri-6.0.1 Genome Coverage :: 9.5x Sequencing Technology :: ABI ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..432738 /organism="Caenorhabditis brenneri" /mol_type="genomic DNA" /submitter_seqid="Scfld02_132" /strain="PB2801" /db_xref="taxon:135651" /chromosome="Unknown" assembly_gap 5694..29304 /estimated_length=23611 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <32271..>33734 /locus_tag="CAEBREN_08973" /db_xref="WormBase:WBGene00147698" mRNA join(<32271..32649,33616..>33734) /locus_tag="CAEBREN_08973" /product="hypothetical protein" /db_xref="WormBase:CBN08973" /db_xref="WormBase:WBGene00147698" CDS join(32271..32649,33616..33734) /locus_tag="CAEBREN_08973" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35075.1" /db_xref="WormBase:CBN08973" /db_xref="WormBase:WBGene00147698" /translation="MWGDTEKPDPLLLGTHIGDGRHHPHHPHHHAHHAHFGLAGKPFY HVDRFAVTATSSSTTTTTTNSSSSNHHLQNHLHHHHNHHNGMTAGTSSMGQINGSGGS TGSKTRSNQPIVMWKGETSRKKRFETFSIEVLAQFPIMINSKISNVMQLFSECPSVDG FRSVS" gene <40539..>43023 /locus_tag="CAEBREN_02456" /db_xref="WormBase:WBGene00141181" mRNA join(<40539..40716,40830..40898,41321..41476,41810..41891, 42372..42460,42510..42704,42752..42901,42950..>43023) /locus_tag="CAEBREN_02456" /product="hypothetical protein" /db_xref="WormBase:CBN02456" /db_xref="WormBase:WBGene00141181" CDS join(40539..40716,40830..40898,41321..41476,41810..41891, 42372..42460,42510..42704,42752..42901,42950..43023) /locus_tag="CAEBREN_02456" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35060.1" /db_xref="WormBase:CBN02456" /db_xref="WormBase:WBGene00141181" /translation="MMNDYIMFRLLVDDSGRHKQKRNSLQPPVVAGAVGAPGQGAGGP RGSFLIPRKSITAENEPFCSPMVPHVPIRERLARRGTSADMSDDASQYTCYAPRRRRM SLLQTLRQQNRALADSGFDMHRQRTDSESTNRDTCSPTQKPSPPVTPSKKTTMAAQIK NKIFGKKKDSGASGAKVYNNGEYSQSCDLINGRSRKSPSTTNDSGRGSQGHLEEKMEA MVIEEHLENDCGCEEEEEEEIDAPILSSKRSDIRRHRTSSCPDIASLSLNHPTTSSVK SGGKKCPIAVDTESEEDHFERVKRPCSPISAADCLVERRLNRKFIEQRRQQVAM" gene <43526..>49556 /locus_tag="CAEBREN_07224" /db_xref="WormBase:WBGene00145949" mRNA join(<43526..43728,43772..43851,44916..44997,45455..45569, 48381..48464,48517..48819,48870..49168,49225..49354, 49404..>49556) /locus_tag="CAEBREN_07224" /product="hypothetical protein" /db_xref="WormBase:CBN07224" /db_xref="WormBase:WBGene00145949" CDS join(43526..43728,43772..43851,44916..44997,45455..45569, 48381..48464,48517..48819,48870..49168,49225..49354, 49404..49556) /locus_tag="CAEBREN_07224" /note="contains similarity to Interpro domain IPR000008 (C2 calcium-dependent membrane targeting)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35071.1" /db_xref="InterPro:IPR000008" /db_xref="WormBase:CBN07224" /db_xref="WormBase:WBGene00145949" /translation="MKLNGMLPGVTLVFFQTVSLFSLSISYFPTMFSCSPLFHIHFKY FSFFRGHIDEVSDAASRISTMSRRTAQTEDLADFDDNISSVILDHFLSTTELNFDDSD SADFSLSGTVEDEFDEPAPSSSNTATSVQTDLTLLNVEQEIAEYLEHCRDASVNITEE GMNFIAKHFFEYQSFMNIPHKAVHLHKVPASQAGTDPSMGWAPKNMLKAGKHQPAPAA RANRVHRDPRPNGTKYGRAGRHEHREWGDRHGELRDEKVACHKDAWTKFLANDDQGAR TAFECDFEDRVLATEEETLQEKLCRTSPEAMNLNALYAAANKAVSCGGETCELLTILT YAPTVQFVTTTVKKARSLPYNNSPFARIMLFEGRRLVEQKQTTVNPSLVHKSSVDGSK PSSSSASTSSNDNPSDASFSESFLFHVPPTKLDRSHIVIELYDHDDEGGLQKIGHCVI GRLVDGTGNAHWIQMVRQHGLPVCMWHKIGSN" gene complement(<49796..>50924) /locus_tag="CAEBREN_26181" /db_xref="WormBase:WBGene00164906" mRNA complement(join(<49796..49981,50022..50319,50866..>50924)) /locus_tag="CAEBREN_26181" /product="hypothetical protein" /db_xref="WormBase:CBN26181" /db_xref="WormBase:WBGene00164906" CDS complement(join(49796..49981,50022..50319,50866..50924)) /locus_tag="CAEBREN_26181" /note="contains similarity to Interpro domain IPR011333 (BTB/POZ fold)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35012.1" /db_xref="InterPro:IPR011333" /db_xref="WormBase:CBN26181" /db_xref="WormBase:WBGene00164906" /translation="MTAVCATPNQARRVIKTADGQQLVLCASDVHYLSVIENMFSDLK ALNGDIPEEVSYSFTFSNCTIILQAFVLIPISIESQVMYKIIEWSRAAKKSDESKLDF QQFFPDLSVKECIQILEASLFLETNKLGKCAAKWLAARLEGKTTTEMARILDVHCIGL SSEQQQKLNKFNLVTPQYID" gene complement(<51591..>52099) /gene="Cbn-jun-1" /locus_tag="CAEBREN_12462" /db_xref="WormBase:WBGene00151187" mRNA complement(join(<51591..51725,51857..51974,52047..>52099)) /gene="Cbn-jun-1" /locus_tag="CAEBREN_12462" /product="CBN-JUN-1 protein" /db_xref="WormBase:WBGene00151187" CDS complement(join(51591..51725,51857..51974,52047..52099)) /gene="Cbn-jun-1" /locus_tag="CAEBREN_12462" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002112 (Transcription factor Jun), IPR004827 (Basic-leucine zipper (bZIP) transcription factor), IPR011616 (bZIP transcription factor, bZIP-1), IPR004826 (Maf transcription factor)" /codon_start=1 /product="CBN-JUN-1 protein" /protein_id="EGT35038.1" /db_xref="InterPro:IPR002112" /db_xref="InterPro:IPR004826" /db_xref="InterPro:IPR004827" /db_xref="InterPro:IPR011616" /db_xref="WormBase:CBN12462" /db_xref="WormBase:WBGene00151187" /translation="MVWSPESMGMTPEEHLEWMSMDDQEKKKLERKRARNRQAASKCR QKKMDRIKELEDQVLHEKHRGQRLDAELVELNRALENFRRMVERHSVTGCPNNSIRG" assembly_gap 55534..58493 /estimated_length=2960 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<62535..>63890) /locus_tag="CAEBREN_16707" /db_xref="WormBase:WBGene00155432" mRNA complement(join(<62535..62780,62856..63363,63633..63771, 63827..>63890)) /locus_tag="CAEBREN_16707" /product="hypothetical protein" /db_xref="WormBase:CBN16707" /db_xref="WormBase:WBGene00155432" CDS complement(join(62535..62780,62856..63363,63633..63771, 63827..63890)) /locus_tag="CAEBREN_16707" /note="contains similarity to Pfam domain PF05705; contains similarity to Interpro domain IPR008547 (Protein of unknown function DUF829, TMEM53)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35056.1" /db_xref="InterPro:IPR008547" /db_xref="PFAM:PF05705" /db_xref="WormBase:CBN16707" /db_xref="WormBase:WBGene00155432" /translation="MTLVAPAEVTDKEAENITTNKEESKRTGNESAITNLVPGSKTLV VLFGWAGCRDRYLSKYAQYYQDAGISTVRFTAPIAKIRSFSSYRPFARCFHTILREIL CGKEEVTTIYFHVFSMNGCSLLAAYWDQLEELENGKEVRRTAKGLIFDSCPAFTTPSQ SAQAISFATLPPSHYHGALRGSYKAVLYTFFSFHRGVLWLRSFLEKDIYERHYAYFKM ITFDDLPNKQLYIYGPADMVCSEESIEDYAKLMEKRGISISKLRLLDSLHCQHLRSHP VTYTQECLDFVKSGHLPANRSRVALENTEENEQNDVPEELAY" gene <64978..>65877 /locus_tag="CAEBREN_04345" /db_xref="WormBase:WBGene00143070" mRNA join(<64978..65065,65116..65570,65621..65686, 65755..>65877) /locus_tag="CAEBREN_04345" /product="hypothetical protein" /db_xref="WormBase:CBN04345" /db_xref="WormBase:WBGene00143070" CDS join(64978..65065,65116..65570,65621..65686,65755..65877) /locus_tag="CAEBREN_04345" /note="contains similarity to Pfam domain PF00226; contains similarity to Interpro domains IPR015609 (Molecular chaperone, heat shock protein, Hsp40, DnaJ), IPR001623 (Heat shock protein DnaJ, N-terminal), IPR018253 (Heat shock protein DnaJ, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35050.1" /db_xref="InterPro:IPR001623" /db_xref="InterPro:IPR015609" /db_xref="InterPro:IPR018253" /db_xref="PFAM:PF00226" /db_xref="WormBase:CBN04345" /db_xref="WormBase:WBGene00143070" /translation="MFLEECKHNFDTDCLYELLGVKKDCDAKELKKGYYRQSMLWHPD KSNLDEEDKKKYTVKFQLLNKAYQILSDDEKRKIYDETGSVDDEAGELNEDVLKAWRN IFKKVTKEDIDNYMKTYQGSEEQKKELLELYARFKGDFSKIKEYAIGFEDAEELKAAF DLFIKDGEIEKTKKYEMSTSQKKMLGYKRKAEKEAAEFENAQKDDASDLVALIQSRQK ERNSSFLDSLEAKYAPSSSKKAKRQ" gene <66295..>66665 /locus_tag="CAEBREN_20830" /db_xref="WormBase:WBGene00159555" mRNA join(<66295..66373,66457..>66665) /locus_tag="CAEBREN_20830" /product="hypothetical protein" /db_xref="WormBase:CBN20830" /db_xref="WormBase:WBGene00159555" CDS join(66295..66373,66457..66665) /locus_tag="CAEBREN_20830" /note="contains similarity to Pfam domain PF03259; contains similarity to Interpro domain IPR004942 (Dynein light chain-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35052.1" /db_xref="InterPro:IPR004942" /db_xref="PFAM:PF03259" /db_xref="WormBase:CBN20830" /db_xref="WormBase:WBGene00159555" /translation="MSDFEETIRRLQSEKGVIGIIVVDSAGRVIHSTIDSDATQSHTA FLQQLCEKTKTSIRELDSSNDLTFLRLRTKKNEIMIAPDKDHVIMVIKDLS" assembly_gap 66774..66783 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 70151..70160 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<76269..>77826) /locus_tag="CAEBREN_20788" /db_xref="WormBase:WBGene00159513" mRNA complement(join(<76269..76514,76588..77095,77367..77505, 77561..77625,77771..>77826)) /locus_tag="CAEBREN_20788" /product="hypothetical protein" /db_xref="WormBase:CBN20788" /db_xref="WormBase:WBGene00159513" CDS complement(join(76269..76514,76588..77095,77367..77505, 77561..77625,77771..77826)) /locus_tag="CAEBREN_20788" /note="contains similarity to Pfam domain PF05705; contains similarity to Interpro domain IPR008547 (Protein of unknown function DUF829, TMEM53)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35058.1" /db_xref="InterPro:IPR008547" /db_xref="PFAM:PF05705" /db_xref="WormBase:CBN20788" /db_xref="WormBase:WBGene00159513" /translation="MLFEAVVGLTTAFLVTYIGMTLVAPAEVTDKEAENITTNKEESK KTGNESAITNLVPGSKTLVVLFGWAGCRDRYLSKYAQYYQDAGISTVRFTAPIAKIRS FSSYRPFARCFHAILREILCEKEEVTTIYFHVFSMNGCSLLAAYWDQLEELENGKEVR RTAKGLIFDSCPAFTTPSQSAQAISFATLPPSHYHGALRGSYKAVLYTFFSFHRGVLW LRSFLEKDIYERHYAYFKMITFDDLPNKQLYIYGPADMVCSEESIEDYAKLMEKRGIS ISKLRLLDSLHCQHLRSHPVTYTQECLDFVKSGHLPANRSRVALENTEENEQNDVPEE LAY" gene <79679..>80578 /locus_tag="CAEBREN_00201" /db_xref="WormBase:WBGene00138926" mRNA join(<79679..79766,79817..80271,80322..80387, 80456..>80578) /locus_tag="CAEBREN_00201" /product="hypothetical protein" /db_xref="WormBase:CBN00201" /db_xref="WormBase:WBGene00138926" CDS join(79679..79766,79817..80271,80322..80387,80456..80578) /locus_tag="CAEBREN_00201" /note="contains similarity to Pfam domain PF00226; contains similarity to Interpro domains IPR015609 (Molecular chaperone, heat shock protein, Hsp40, DnaJ), IPR001623 (Heat shock protein DnaJ, N-terminal), IPR018253 (Heat shock protein DnaJ, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35042.1" /db_xref="InterPro:IPR001623" /db_xref="InterPro:IPR015609" /db_xref="InterPro:IPR018253" /db_xref="PFAM:PF00226" /db_xref="WormBase:CBN00201" /db_xref="WormBase:WBGene00138926" /translation="MFLEECKDNFDTDCLYELLGVKKDCDAKELKKGYYRQSMLWHPD KSNLDEEDKKKYTVKFQLLNKAYQILSDDEKRKIYDETGSVDDEAGELNEDVLKAWRN IFKKVTKEDIDNYMKTYQGSEEQKKELLELYARFKGDFSKIKEYAIGFEDAEELKAAF DVFIKDGEIEKTKKYEMSTSQKKMLGYKRKAEKEAAEFENAQKDDASDLVALIRSRQK ERNSSFLDSLEAKYAPSSSKKAKRQ" gene <80997..>81367 /locus_tag="CAEBREN_15757" /db_xref="WormBase:WBGene00154482" mRNA join(<80997..81075,81159..>81367) /locus_tag="CAEBREN_15757" /product="hypothetical protein" /db_xref="WormBase:CBN15757" /db_xref="WormBase:WBGene00154482" CDS join(80997..81075,81159..81367) /locus_tag="CAEBREN_15757" /note="contains similarity to Pfam domain PF03259; contains similarity to Interpro domain IPR004942 (Dynein light chain-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35017.1" /db_xref="InterPro:IPR004942" /db_xref="PFAM:PF03259" /db_xref="WormBase:CBN15757" /db_xref="WormBase:WBGene00154482" /translation="MSDFEETIRRLQSEKGVIGIIVVDSAGRVIHSTIDSDATQSHTA FLQQLCEKTKTSIRELDSSNDLTFLRLRTKKNEIMIAPDKDHVIMVIKDLS" gene complement(<81857..>82951) /locus_tag="CAEBREN_12817" /db_xref="WormBase:WBGene00151542" mRNA complement(join(<81857..82228,82281..82613,82661..82747, 82814..>82951)) /locus_tag="CAEBREN_12817" /product="hypothetical protein" /db_xref="WormBase:CBN12817" /db_xref="WormBase:WBGene00151542" CDS complement(join(81857..82228,82281..82613,82661..82747, 82814..82951)) /locus_tag="CAEBREN_12817" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001222 (Zinc finger, TFIIS-type), IPR003618 (Transcription elongation factor S-II, central domain), IPR014754 (Transcription elongation factor, TFIIS, N-terminal, fungal-type), IPR003617 (Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type), IPR017923 (Transcription factor IIS, N-terminal), IPR017890 (Transcription elongation factor S-IIM), IPR006289 (Transcription elongation factor, TFIIS)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35062.1" /db_xref="InterPro:IPR001222" /db_xref="InterPro:IPR003617" /db_xref="InterPro:IPR003618" /db_xref="InterPro:IPR006289" /db_xref="InterPro:IPR014754" /db_xref="InterPro:IPR017890" /db_xref="InterPro:IPR017923" /db_xref="WormBase:CBN12817" /db_xref="WormBase:WBGene00151542" /translation="MTALEQTQALCVQVDDICQNGMESAEDCIKLLDELAKIPMSVEI IQKTNIGIKVNTMRKKVSDEAIAKRAKNIIKEWKNIVDGKGKSQDDGDAPPPAKKQRK ESVEAPKPEKKKLEAPFKRPEPSNRPEIVAQFASAAFPPKHLENDETRLKSAQLLLSA LRSGEMPQGTLDPEELAVQIEEKLHSVHRGTNKNYSAAVRSRIFNLRDKKNLALRENV LTGVVRAEKFATMTSEEMASPEIRNMRDKFTKEAILEHQMSVQQGTPSDMFKCGKCGK KNCTYTQLQTRSSDEPMTTFVFCLECGNRWKFC" gene <83709..>86545 /gene="Cbn-clh-5" /locus_tag="CAEBREN_11491" /db_xref="WormBase:WBGene00150216" mRNA join(<83709..83808,83862..83967,84015..84098,84145..84283, 84328..84975,85027..85145,85193..85793,85842..86131, 86180..86324,86384..>86545) /gene="Cbn-clh-5" /locus_tag="CAEBREN_11491" /product="CBN-CLH-5 protein" /db_xref="WormBase:WBGene00150216" CDS join(83709..83808,83862..83967,84015..84098,84145..84283, 84328..84975,85027..85145,85193..85793,85842..86131, 86180..86324,86384..86545) /gene="Cbn-clh-5" /locus_tag="CAEBREN_11491" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR014743 (Chloride channel, core), IPR000644 (Cystathionine beta-synthase, core), IPR001807 (Chloride channel, voltage gated)" /codon_start=1 /product="CBN-CLH-5 protein" /protein_id="EGT35048.1" /db_xref="InterPro:IPR000644" /db_xref="InterPro:IPR001807" /db_xref="InterPro:IPR014743" /db_xref="WormBase:CBN11491" /db_xref="WormBase:WBGene00150216" /translation="MERAGRSSTLGSTDEVELEPSGTSATIHLDMTGGGGSSSSDFNP FGGIDDVRFKTDDDLPDVMAPPFFSKYGDFHTIDWQRDLARDRLRHKMISKKKVDFPL GLLQSGWDAGAGWICVLFVGLAAGATAGIIDIGARWMSDLKTGVCADRFWLDREHCCW SSNDTFYKDDDCKAWTKWPWMLNYYNSSSFLFLFLEWIFYIGWAVAMSTLAVLFVKIF APYACGSGIPEIKCILSGFVIRGYLGKWTFIIKSVGLILSSASGLSLGKEGPMVHLAC CIGNIFSYLFPKYGLNEAKKREILSASAAAGVSVAFGAPIGGVLFSLEEASYYFPLKT MWRSFFCALVAGIILRFVNPFGSNQTSLFHVDYMMKWTFIELVPFALLGLFGGIIGSL FIFANIRWSRFRKNSKTLGGNPIYEVMIITFITAAISYFNPFTRKSALSMIQQLFDRC EDQVDEDSLCDQNKALSIAFGQLLWALIFKFIITIFTFGIKVPCGLFVPSIGMGAIAG RILGITVDQIFRAVQATPGHSEYFTCQIGKDCVMPGLYAMVGAAAVLGGVTRMTVSLV VIMFELTGSLEFIVPTMVATMFSKWIGDGISKMGIYEAHIELNGYPFLDSKGEYPYST VASQVMRPSIHRQVADEMSMSDLRELKNELSVITESGMSLGDLESLLRQTDFNGFPVV VSQNSMHLVGFITRRDILLALHTARKTQPYVVTNSIAYFSDGVPDSVPGGPAPLRLRK ILDMAPMTVTDQTPMETVIDMFRKLGLRQVLVTKNGKVLGIITKKDILQFMRNKNSQ" gene <88596..>89326 /locus_tag="CAEBREN_01578" /db_xref="WormBase:WBGene00140303" mRNA join(<88596..88691,88773..88866,88915..89030, 89078..>89326) /locus_tag="CAEBREN_01578" /product="hypothetical protein" /db_xref="WormBase:CBN01578" /db_xref="WormBase:WBGene00140303" CDS join(88596..88691,88773..88866,88915..89030,89078..89326) /locus_tag="CAEBREN_01578" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35009.1" /db_xref="WormBase:CBN01578" /db_xref="WormBase:WBGene00140303" /translation="MNNAPMTYKMTPMRDVYYEEEKKVCCGKLTYKNACILIGVMEVA YWAYYGVLLLFAIVHHQKAWSVVFTGVNLIMLTAQVVILWYGVVNEAHKFLQTHLIFL TLTFLWDVVLAIGFFCLSVLPYAYTNDILQYKGAEWNARLFGIIMGSLLLVWFVARFF ATVIIYRYWKLLRALQGYGNDNDF" gene <91852..>92476 /locus_tag="CAEBREN_12666" /db_xref="WormBase:WBGene00151391" mRNA join(<91852..91980,92034..92105,92156..>92476) /locus_tag="CAEBREN_12666" /product="hypothetical protein" /db_xref="WormBase:CBN12666" /db_xref="WormBase:WBGene00151391" CDS join(91852..91980,92034..92105,92156..92476) /locus_tag="CAEBREN_12666" /note="contains similarity to Pfam domain PF00010; contains similarity to Interpro domains IPR015660 (Achaete-scute transcription factor related), IPR001092 (Helix-loop-helix DNA-binding domain), IPR011598 (Helix-loop-helix DNA-binding)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35015.1" /db_xref="InterPro:IPR001092" /db_xref="InterPro:IPR011598" /db_xref="InterPro:IPR015660" /db_xref="PFAM:PF00010" /db_xref="WormBase:CBN12666" /db_xref="WormBase:WBGene00151391" /translation="MTASTSSKSSSTPSTKVSSSSKSFVTKQTKQKRNERERKRVDQV NQGFSRLQESVPRAAGAKKNMSKVETLREAARYIQHLQKQLGMMPTSMPVDFPTPEQS PVYPIPICNMMPQTPSPTYISPYYPAPQTMLIKQEITSQYYSGQENSSSSASSSDSNS GDHHSFYSHGDNY" gene complement(<95394..>96618) /locus_tag="CAEBREN_25241" /db_xref="WormBase:WBGene00163966" mRNA complement(join(<95394..95489,95534..95692,95735..95917, 95967..96485,96532..>96618)) /locus_tag="CAEBREN_25241" /product="hypothetical protein" /db_xref="WormBase:CBN25241" /db_xref="WormBase:WBGene00163966" CDS complement(join(95394..95489,95534..95692,95735..95917, 95967..96485,96532..96618)) /locus_tag="CAEBREN_25241" /note="contains similarity to Pfam domain PF00560; contains similarity to Interpro domains IPR001611 (Leucine-rich repeat), IPR000875 (Cecropin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35045.1" /db_xref="InterPro:IPR000875" /db_xref="InterPro:IPR001611" /db_xref="PFAM:PF00560" /db_xref="WormBase:CBN25241" /db_xref="WormBase:WBGene00163966" /translation="MNVTNITSEDGVKEYENIVVEPEEIEYVEISPDAKNVDLTRHRL KEIGDYSWLTHVEHFSLRWNLIKKIENLDSLTTLTHLEFYDNQITKVENLDSLVNLEV LDLSFNRITKIENLEKLTKLKTLFFVHNKITKIEGLETLTKLEYLELGDNRIAQIENL ENNLKLDRLFLGANQIRVIENVDHLKNLTVLSLPANAITIVDNIAGLTSLKEIYLAQN GIKYICGIDEHLPLEILDLNQNRLEKVENIHQLSTLTDFWARGNKLSDWSILDELVRL PLLSCVYLDSNPFSEADTYRGKVIRFLPQIYRLDGTQCREKSILRPPKVVTESTRVEF ENASEEQQTAESV" gene <105876..>110442 /locus_tag="CAEBREN_06023" /db_xref="WormBase:WBGene00144748" mRNA join(<105876..105902,106054..106613,106718..107016, 107367..107552,107600..107763,107807..108087, 108285..108444,108551..109138,109792..110019, 110335..>110442) /locus_tag="CAEBREN_06023" /product="hypothetical protein" /db_xref="WormBase:CBN06023" /db_xref="WormBase:WBGene00144748" CDS join(105876..105902,106054..106613,106718..107016, 107367..107552,107600..107763,107807..108087, 108285..108444,108551..109138,109792..110019, 110335..110442) /locus_tag="CAEBREN_06023" /note="contains similarity to Pfam domain PF02205; contains similarity to Interpro domain IPR003124 (Actin-binding WH2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35086.1" /db_xref="InterPro:IPR003124" /db_xref="PFAM:PF02205" /db_xref="WormBase:CBN06023" /db_xref="WormBase:WBGene00144748" /translation="MFSGHPILDEIKKGFKLRPTKTVDKSKPIIYAEGEDENEVAVTK RAPPSGILPPGQAIPKPSFIPPPIPNGFIPPPFEGGIPPPPPMFSGGIPPPPPMMGGI PPPPPMFGAPPPPPPPSSALGAAPQPPRPKTPLNPALAKLGGKTPGTVDRGEFLKGIQ GGFKLKKTVTNDKSGLFVDEEMREKSVTLVEAAPSSYIAPDRGRSPARPHSSLGFGSE DNRFRTPEPRDDSPEQLLGQRRPIVMRQKGAPPPPPPEFGFDSEKQKVTSEDIEKEIK KGSVASKMAALMGNMGYSAEKCEQIGTGTLPRATFRRSPLRSSMMSSSSEVNNNHDND TPKPKPVSKWHVDTNYGLKSASRSNVPIEKEERASSVMRDRSSSWLDLTRPSTVERAR TQSPIPLCERLELDDLDFDQLVDEVAAEEAAKAARSVEKPPPLEKKKSTTIKKKSKNL PEPISVTTDFCTTGARRPSTTPQIQETPPTPAQKKTYGYTSTSSVPNNSKGTSTWRST SPSAVEPSGGMSPISSMSSASAPSPSSLSAGSVSPDSTPKKRIGANPNFEKAKEKWGA VPNADDSPPTARGYLMRESKTPTREESTPVREKTPVKTTTPEEPKSKKVTTASSAMNK NKEKEKSPPCFAVTAAEAKGAAAVAKAKSRKKSLKSTPSVPLSTTSSITTTTNKPTST SSTKPNTSSSSTEHSPSPKPTTASSQKRDSISNADIKKKTPYGQPMTGTVADRANKFR QQLQIDDEKGKKPWQHPFMSSSSNPSTSTLSAREQLFASSPRHHSPSQHVINVPISAP WYSREPIINSEPPTQNSTPRLSNASKYSPNSYRISFDEFTVPHPSQMRDHLHFNIDLS HDMPLFVSRR" gene <113115..>114277 /locus_tag="CAEBREN_03170" /db_xref="WormBase:WBGene00141895" mRNA join(<113115..113225,113333..113360,114093..>114277) /locus_tag="CAEBREN_03170" /product="hypothetical protein" /db_xref="WormBase:CBN03170" /db_xref="WormBase:WBGene00141895" CDS join(113115..113225,113333..113360,114093..114277) /locus_tag="CAEBREN_03170" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35013.1" /db_xref="WormBase:CBN03170" /db_xref="WormBase:WBGene00141895" /translation="MSAVEERQPEKRALEKGDENDDVVPAKEAKIENGKAEEEPKEKV VTEEAEGEEEGDDEDADDEEEEVNDEDSSEGEGEGSDGGDGEEEEGSGDDEDGEEAEG GDESD" gene <116407..>116903 /gene="Cbn-rpl-32" /locus_tag="CAEBREN_14063" /db_xref="WormBase:WBGene00152788" mRNA join(<116407..116483,116531..116699,116745..>116903) /gene="Cbn-rpl-32" /locus_tag="CAEBREN_14063" /product="CBN-RPL-32 protein" /db_xref="WormBase:WBGene00152788" CDS join(116407..116483,116531..116699,116745..116903) /gene="Cbn-rpl-32" /locus_tag="CAEBREN_14063" /note="contains similarity to Pfam domain PF01655; contains similarity to Interpro domains IPR001515 (Ribosomal protein L32e), IPR018263 (Ribosomal protein L32e, conserved site)" /codon_start=1 /product="CBN-RPL-32 protein" /protein_id="EGT35032.1" /db_xref="InterPro:IPR001515" /db_xref="InterPro:IPR018263" /db_xref="PFAM:PF01655" /db_xref="WormBase:CBN14063" /db_xref="WormBase:WBGene00152788" /translation="MVHVSGTKVKVVKKKLTKFKRHESDRYRRVAPSWRKPKGIDNRV RRRFRGMRAMPTIGFGTDKRTRFVLPNGYKKVLVQNVKDLDMLLMQSYKYIGEIGHGV SAKSRKGIVERAAQLNIKLTNGNARLRTEESE" gene complement(<117306..>118685) /locus_tag="CAEBREN_17995" /db_xref="WormBase:WBGene00156720" mRNA complement(join(<117306..117428,117477..118087, 118262..118341,118385..118563,118617..>118685)) /locus_tag="CAEBREN_17995" /product="hypothetical protein" /db_xref="WormBase:CBN17995" /db_xref="WormBase:WBGene00156720" CDS complement(join(117306..117428,117477..118087, 118262..118341,118385..118563,118617..118685)) /locus_tag="CAEBREN_17995" /note="contains similarity to Pfam domain PF03357; contains similarity to Interpro domain IPR005024 (Snf7)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35085.1" /db_xref="InterPro:IPR005024" /db_xref="PFAM:PF03357" /db_xref="WormBase:CBN17995" /db_xref="WormBase:WBGene00156720" /translation="MVSYLPEEWQDDIKMSGLMSVMKDRAVNKVDYDRKLRFWTDTIY ASCVGEKNAVFDLLVLKRRFRRKDKIPASLNIVLERMKEIGDIMTLAEWRDRHSGWLG WGISKTKATTETFDIILEHLTDTGDLTVGTTKTGEKVLKFKDHGSADPLKFTEADSSV VDIRKAMTKLDREIQQLEQKVKKYDEQCRACLRSGDKGRAQNFLRQRKRAEKDVADKD VQYQKLLTILHQISAAKNNKDVLKAYQSGAAAFKATLARQGLSPDKVHETMDDVANSI DEYKEIEEAISSPFISSSAVSDTELEQELDELISESKKDESIQLPNAPTNRFGLFDRE VTPEEDQLEKRLARLRQAV" gene <120135..>130829 /locus_tag="CAEBREN_28637" /db_xref="WormBase:WBGene00190602" mRNA join(<120135..120287,120405..120881,120957..121294, 121344..122038,122082..122789,122848..123263, 123304..123400,123443..123533,123578..123773, 123821..123913,123959..124221,124269..124491, 124541..125124,125177..125394,125445..126049, 126104..126357,126405..126627,126677..127260, 127313..127530,127581..128592,128656..129888, 129938..>130829) /locus_tag="CAEBREN_28637" /product="hypothetical protein" /db_xref="WormBase:CBN28637" /db_xref="WormBase:WBGene00190602" CDS join(120135..120287,120405..120881,120957..121294, 121344..122038,122082..122789,122848..123263, 123304..123400,123443..123533,123578..123773, 123821..123913,123959..124221,124269..124491, 124541..125124,125177..125394,125445..126049, 126104..126357,126405..126627,126677..127260, 127313..127530,127581..128592,128656..129888, 129938..130829) /locus_tag="CAEBREN_28637" /note="contains similarity to Pfam domain PF00443; contains similarity to Interpro domains IPR001394 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2), IPR018200 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site), IPR018247 (EF-Hand 1, calcium-binding site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35024.1" /db_xref="InterPro:IPR001394" /db_xref="InterPro:IPR018200" /db_xref="InterPro:IPR018247" /db_xref="PFAM:PF00443" /db_xref="WormBase:CBN28637" /db_xref="WormBase:WBGene00190602" /translation="MPIGISANSPIDGDTAPLNVSNNESGDEGPRKRSASPETANQSA WGDNPAKKICTEGIDQWVQSTSDAAPPDISHAYQDNHDVLVSMGFVLTKILSGSIFKF NFRFKTDEIDAALRLSNNEMEKAVQYLTREITGLDAAPRPTPSSVEKPKNTYPIPGIL PFEDSDEEDIPDDRKTVWDEEQMIRLRVIIDSNPRYVIFHQNGTLHRRMMIAENIIAL GKHERMPEVLHFVDEILPFIIGRHVNCSDVRPGFELLRQLLELQPPYIGDPEARIIEQ FFIACTPLLCSRLTLTPSSVKTVLAIDEMFNFRNKFFVQGVQYIDTPERVFPPLKYID IERLERLEFKRIYAYLADVFVTALIPMIDSKIDVHSDEKFFEVTLLDLQCLLRSLNIF SNFIRRDNDVILIKMETYVTKALDRFRIVNDKEIRDALIRRNGLDLLQEIVILCDRFD LDVASTTQAARLDYLRKWIRCPQMECILNALEELGTIADRFHRNGGLTITRPKSHVNE EFFKKWLEENKVLQIVLTGNMDHVVYVERIQPILQYMTPELTLDDMKFVWSLRKGRMG VSVENFNKIMEFISKSVNNEQIEWLIELFKKSFRSRETRLYEPIFNFAYTIANQKEKD DECRLKICNIIWELINIARGPPRCSSFKAIEHGMKKHCDLLNIIFDKTERDTFLENMM ESLHDDDGFNEITVVYLSIMFEKLKRILTPKRSFNGGGWLDFLLLFSIFFSISDEVLV KVNELRCHLRDKRLSDPILSRLEHVRQIAHERYEASQQATQDSLSNAVFESTSDAYGG HHVDNILATSIYGCTDYAFILQNSLRLLKWLHDFDASIVDVDYVDSLFRIFIEQPDST SQEKTEIFGFLFEVKMSLMRKDTSRAIISHLCKMDMFTLQITGLRCFCKYWEELPILS NEEIRPVESFIVKVIKDNECKLFVWKLILFNQYDDVVEKCIETFCERDLVLVDAPFAV RHHTLNFLSVFCFYVEKLKSELYKRSGRPDTEIKYDRKELELDLEEIRQHNVRLDDIL TETISRALNRLIRFMTRFVELGNEKNHMIRENPSHGSLISGHPVTFSIELKNDDDDMD YFQCGLNSWKQFVCDSSTTVGEFKVRLAKRLVFHEAMPEFTVHKRDEDLTMGEANLRY DFLTLQNVKLASETDSIFLSEKLRILVKQKKSSNRRGADPQSHQIIQKKALREDYLPM AVISKYNFYDLLHELSSTGDKYIRASVRKLLLLLPTQPSLLKQLTYGVRDESTSPDDM SDSDDISQDDFAKKIKNMYAEYMSPSEPGKMLYALETISSIVAPTRLTMQATEESIEL THALLNTTLIDDLTSEILTKPHTIPINKCSAGDRHAIFERILQIMRSVYTGRNTFTKM IKNEIRIREEMAKTCDRMVQSRQTPRPIDPALEFALIKQQITPPPAVVDNQNNPAQAT SLPVLEFNITFSSIIRKSLKKWSLSKLIYFFESVRNFQWIHVATESLVCKEIQPFYKT KKGFEKSNPTASELIREVAKGERWGDECRLIIVKKAFSLFRHVLRDWVEDHRESAMPL LEKLFVENSWLQFYQDVLVNSQQEAYRKYVQESLVKLGKDSYEITTITLKMLLDMFMS LPLHEGHTSDLGELQRRQRQHCDGIVQAVVEIFYFDSPRRCREDQKDIECSQIGRKPI DIIRDQIQSLIMFKPKVSAPRXXXXPSHGSLISGHPVTFSIELKNDDDDMDCGLNSWK QFVCDSSTTVGEFKVRLAKRLVFHEAMPEFTVHKRDEDLTMGEANLRYDFLTLQNVKL ASETDSIFLSEKLRILVKQKKSSNRRGADPQSHQIIQKKALREDYLPMAVISKYNFYD LLHELSSTGDKYIRASVRKLLLLLPTQPSLLKQLTYGVRDESTSPDDMSDSDDISQDD FAKKIKNMYAEYMSPSEPGKMLYALETISSIVAPTRLTMQATEESIELTHALLNTTSI DDLTSEILTKPHTIPINKCSAGDRHAIFERILQIMRSVYTGRNTFTKMIKNEIRIREE MAKTCDRMVQSRQTPRPIDPALEFALIKQQITPPPAVVDNQNNPAQATSLPVLEFNIT FSSIIRKSLKKWSLSKLIYFFESVRNFQWIHVATESLVCKEIQPFYKTKKGFEKSNPT ASELIREVAKGERWGDECRLIIVKKAFSLFRHVLRDWVEDHRESAMPLLEKLFVENSW LQFYQDVLVNSQQEAYRKYVQESLVKLGKDSYEITTITLKMLLDMFMSLPLHEGHTSD LGELQRRQRQHCDGIVQAVVEIFYFDSPRRCREDQKDIEWSQIGRKPIDIIRDQIQSL IMFKPKFSTTNNDIALTENVYAAAKMRMITCLLSYCSQADIEDCSTAFLEAIVNDFLF PELPDIYDSMFEEESIRWEYQARDQAIQTINAFCERSYRNSFQLLNMWNRFPVSQKTY DPAYRPIIRPKTFDKVGMKNDGGTCYMNAMIQQLVHVPGLARDLVSLQNIDSSLRWGD NTAALLCELQKVFAQLIFSQCQAIVPFGLWKEFRFEPDMPLNTKQHHDAIDFYSILLD KCDNVLKKLNLPPLFQNRFFGKYSYEKICYGCWHRYKSPDEEFNCVSLALSGDNLGEA LENFLAAHVMEGENAYHCEKCNEKKTTLNRSSFYELPSTMTIQLKRFTYDLVNNMIRK DNQFFSFPFEIDMAPYMSTSRHVPDEHVQDLFDEMLWGNTGNEEPASPEHNKNGVSEK SNMGSGSASTPSLDSNQKKFRRHRSSTMRLSQSFANTSGFEIPAQQKPLIYELVGVLA HSGIATAGHYYSFIKERRDEYKDSPTYGKWHQVNDMSVTSMSLNNIDDIWYGGTFTQE GGIKMKITKIYLNFKYISVFLGMDERVRHWNAYVLFYEKKNDEPTVTIPSLIGSFNQV KPKVTFDVTDEQMDDGEDKYAEIEEVLKMEMSESRKLRVKMFKSLDEKLKKFLNDEYL KFLEDRDFFSFDLYQIYINSFLPLLRRDNSLEYTVEEMSKPEFFKAAFENVATYIIRV AWIMFDDSRPKTFPRAATELIKLLLHRHPDNKMVFFRVLEANNSEMLTRMLETTEHDL RISFWSCMRVALRLWVLENGNKDDSVLDPSPDSTDLDDDDDDEDDEDDEDDDLEDEDS EAEEMMRPDLIRNNPMALVSHLMNQARPPPLKLNPIDLSKARSQRVSLIEEKYYLTFH FQLNIIRRIIQVLP" assembly_gap 125961..125970 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 131251..134612 /estimated_length=3362 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <135495..>136320 /locus_tag="CAEBREN_23286" /db_xref="WormBase:WBGene00162011" mRNA join(<135495..135689,135742..135867,135916..136032, 136078..>136320) /locus_tag="CAEBREN_23286" /product="hypothetical protein" /db_xref="WormBase:CBN23286" /db_xref="WormBase:WBGene00162011" CDS join(135495..135689,135742..135867,135916..136032, 136078..136320) /locus_tag="CAEBREN_23286" /note="contains similarity to Interpro domain IPR001441 (Di-trans-poly-cis-decaprenylcistransferase-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35069.1" /db_xref="InterPro:IPR001441" /db_xref="WormBase:CBN23286" /db_xref="WormBase:WBGene00162011" /translation="MIDVGWICVGAVRAVYWLVMLVCNFLGYSPLWAQIAMKNRKMDN TRIRIPAHLAVCFTEEKLIDLNDVLELMDSCVATGIRQLSLYDPFGILVAQIEQIKQT CRLFNRVDLFSDGKSVHSNGLSNLQVNVLSRNMGKKALVEACKTLCLDDDQITVEKIS KTLEDRFHLSDPDFLLQIGNVPTLCGYPPWNLRITEFLQSPRLPCSRRALDSCVEAFS HRDIRVGK" gene <137885..>140182 /gene="Cbn-gcs-1" /locus_tag="CAEBREN_18653" /db_xref="WormBase:WBGene00157378" mRNA join(<137885..137953,138000..138273,138371..138447, 138495..139070,139121..139825,139874..139996, 140042..>140182) /gene="Cbn-gcs-1" /locus_tag="CAEBREN_18653" /product="CBN-GCS-1 protein" /db_xref="WormBase:WBGene00157378" CDS join(137885..137953,138000..138273,138371..138447, 138495..139070,139121..139825,139874..139996, 140042..140182) /gene="Cbn-gcs-1" /locus_tag="CAEBREN_18653" /note="contains similarity to Pfam domain PF03074; contains similarity to Interpro domain IPR004308 (Glutamate-cysteine ligase catalytic subunit)" /codon_start=1 /product="CBN-GCS-1 protein" /protein_id="EGT35019.1" /db_xref="InterPro:IPR004308" /db_xref="PFAM:PF03074" /db_xref="WormBase:CBN18653" /db_xref="WormBase:WBGene00157378" /translation="MGLLTKGSPLTWAETIPHIDYIKKHGIKQFINLYHRLKSRHGDQ LKWGDEIEYTIIKFDHDNKKVRVSCRAEELLNRLQAEEQMNAMLGTANKFLWRPEFGA YMIEGTPGMPYGGLIACFNIVEANMKLRREVVKKLLKKDETCLSISFPSLGVSGFTFP EVAADRTNDDAANSIFWPEQAVFLGHPRFKNLTKNIKGRRGSKVAINVPIFKDTNTPS PYVEDLSAFGGPDDTRDAKPDHIYMDHMGFGMGCCCLQVTFQAVNVDEARWLYDQLTP ITPILLALSAATPIFRGKLSNVDSRWDIISASVDDRTPEERGLEPLKNSKWVIDKSRY DSTDCYIYPCSVGYNDIPLQYDETIYQQLIDGNIDEPLAKHIAHMFIRDPHQVFRERI EQDDEKSSEHFETIQSSNWMNMRFKPPPPDAPEIGWRVEFRPTEVQLTDFENAAYCCF VVLLTRMIISFRLTYLMPISMVTENMKRAQQKDAVLNQKFLFRKGLAECKSAPENLKG SEKCGPPSQDMEEMSIDEIMNGKKNGFPGLISLIRQFLDSADVDVDTRCTISQYLNFI SKRATGEISTLAHWTREFVQSHPAYKHDSDVNDTIVYDLMKKMDAISSGEDHCDKLLG CYRSKTDHAISSAVRKAEEHMIVSSQKRAH" gene <141988..>142212 /locus_tag="CAEBREN_12963" /db_xref="WormBase:WBGene00151688" mRNA <141988..>142212 /locus_tag="CAEBREN_12963" /product="hypothetical protein" /db_xref="WormBase:CBN12963" /db_xref="WormBase:WBGene00151688" CDS 141988..142212 /locus_tag="CAEBREN_12963" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35088.1" /db_xref="WormBase:CBN12963" /db_xref="WormBase:WBGene00151688" /translation="MFPFGILLFRLFSDSSPFFARDLSASLSSHRASSSFSDKCKKKQ YQRISRERKRPMKPILSSTSSYPPSLQATV" gene <145622..>147838 /locus_tag="CAEBREN_02300" /db_xref="WormBase:WBGene00141025" mRNA join(<145622..145767,147206..147626,147677..>147838) /locus_tag="CAEBREN_02300" /product="hypothetical protein" /db_xref="WormBase:CBN02300" /db_xref="WormBase:WBGene00141025" CDS join(145622..145767,147206..147626,147677..147838) /locus_tag="CAEBREN_02300" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35076.1" /db_xref="WormBase:CBN02300" /db_xref="WormBase:WBGene00141025" /translation="MASEISRLMISLLILFVALLTSTDSAPAFCRACNKNCFMPINGT EEINSTAIDVDLLREIETNGIESTESSRRTKREVEFRACSRFQIEMLLIPLAIAMIPL VLCALFLCTCCCGPKESRGKLPAEFLAALPMSKKRTDKLASEEIELEWGDGYVARKDS SRTKFSTTVSYIEARRESIWSATSVASDTAVENLKHESAKCETQLGAPSAPKLTKAKS CDSIKKTRFSDTVSVISLDSSSRR" gene <155883..>167873 /gene="Cbn-dep-1" /locus_tag="CAEBREN_04805" /db_xref="WormBase:WBGene00143530" mRNA join(<155883..156109,156166..156264,156405..156567, 156616..156859,156975..157144,157255..157413, 157461..157615,157666..157813,157862..158510, 158722..159118,159174..159249,159328..159583, 164734..164851,166065..166427,166767..167217, 167270..167499,167549..167684,167736..>167873) /gene="Cbn-dep-1" /locus_tag="CAEBREN_04805" /product="CBN-DEP-1 protein" /db_xref="WormBase:WBGene00143530" CDS join(155883..156109,156166..156264,156405..156567, 156616..156859,156975..157144,157255..157413, 157461..157615,157666..157813,157862..158510, 158722..159118,159174..159249,159328..159583, 164734..164851,166065..166427,166767..167217, 167270..167499,167549..167684,167736..167873) /gene="Cbn-dep-1" /locus_tag="CAEBREN_04805" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR008957 (Fibronectin type III domain), IPR003961 (Fibronectin, type III), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)" /codon_start=1 /product="CBN-DEP-1 protein" /protein_id="EGT35082.1" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR008957" /db_xref="InterPro:IPR016130" /db_xref="WormBase:CBN04805" /db_xref="WormBase:WBGene00143530" /translation="MIRWKYGIHSLIWLLLVLHFSTCQSDSLTTSAEQHELFAIKKDS LSPWSQILVSLPRRHPLYQSFAAKVQDVTENISDEIRDSNKTFVSSDDSPYNIRIHAL RPGHRYSIAIYGQKDGSTSLIKEESVVMDPRAPDFRSTDSDIQVAEHNITMRTIKNDS YLQDSFSIEYRQINPDKKFPVLQILDIPEQKNLEFYLGNLNSGFDYSVRVIAHKDGMS SRPWISTLTTKPSPIKEVNINQNTGSFDHGYLHATKPSPIKEVNINQNTGSCVEVTWK TDEFSGADFYTIQYALQSNPSNSTNMTIPSTETSISICDSMLQGEAYQIVASVQKGGQ MSEPLLTKFQLRPLPPIDFRVRADLKRGKYKMLAELPTSSKIDKCQITVAGDEVERSV NYANIEQTKSGHRICWFNFALSPGERFDFSISSMSDESTSQKLQKSIVLTPAFDFNAF GLTLQESNGGIELIWPKSEVFMSRVKDIWNKVVGADSLLNMRITPIGNNEETDKTMKF ETSPKNLDPVFAKNLVKGACYRVQLFTVTKTGIISETRHNETIRMSSPAVNVSLESVT RSSATLRIVFSTHHDSTSISNCQMHIVVRDMNGKSVFDKRMQLTSTFAPLLNLDGLRP FHKYTVNTQIICGGGNETPQCPAATRTMRQLSFSTRQDKPAAVQSLKVEPLNSYSVML TWLPPALPNGILTHYNVNVTKMGSDETRTIDVGVSSNRSDHTVQVVIDELFGGHTYNF SVRAVTEAGFGETSPVIPSVSMPLMAPPKPIVSPVIMKESIGSHSMIVRFPTTMFDNR NGEIKQFAIIVSETTADESINRWLETDNGTYTWQQVQRFDVWPSYVAKLQDIQKVKQD ADVSIFEELGDDESCREVRADRICNGPLRSASKYRVRIRLFTSPTLFTDSPPSQVMTT GSATPAIPLLTVVAVLIVIAFAGIVGTIFLFFWNRTKKARLAAAAFKNGPSKEKESQW EALKMMMAERAADCLAKLGLDATTPPPSSTTSSNSPTSTSTTMTDCGSNPHLGAPNAN AGGHRRTRSLRERTGVEHRLERLSSGPIHRTPLYTVVSGANTNKSRPVRLEDFAEHVR LMSADSDFRFSEEYDMMRNVGVGQSVAASELIVNRPKNRFTNIPAYDHSRVKLSNPSN IEGGDYINANYVPGFSSRREFIAAQGPLPSTRDHFWQMTWEQQCPAIIALTKCVEKGR DKCHQYWPDHPNVPVMYGEIEITIVAEKEYEEFVIRDIRLEKSGPDGRITRYVRHLHY MAWPDFGAPAHPNGIIQFSRMFRHHLPHSPHNAPTIVHCSAGVGRSGTFISIDRLLQT SSLGEPVDVFGTVCEMRYERCQMVQNEQQYIFIHYCVLHVLQGSSPSPTSSSGAHHNA GFVQDGQMIVESGF" assembly_gap 156890..156899 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <169090..>169963 /locus_tag="CAEBREN_29245" /db_xref="WormBase:WBGene00191210" mRNA join(<169090..169518,169562..>169963) /locus_tag="CAEBREN_29245" /product="hypothetical protein" /db_xref="WormBase:CBN29245" /db_xref="WormBase:WBGene00191210" CDS join(169090..169518,169562..169963) /locus_tag="CAEBREN_29245" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35028.1" /db_xref="WormBase:CBN29245" /db_xref="WormBase:WBGene00191210" /translation="MSSSEDAVEAILKAQSSAWNTYPKLIQRAALPPISPKTTPSMLI KNESIGSSSQFLFYKSFHRKVYLLCYSYLRFSSEQSRPSTSTTSRPPTTKIGFPALPK LPTTLQKPLEPVSEKPQTPLYPIPRTNISYVLNLNDIDENEVLRPESVASTVIDSDRE IERKLLRIPETFSEFRELSVDLDQVSIEDIEKMLQNTKAHDHHSNGLVSMSSLLNSIR IIHPSDTWQHLLDWLIATSIMEDKETEPASTSSNVIFFIDYQLFFEVLQNDKQSREVL " gene <171242..>171953 /locus_tag="CAEBREN_03438" /db_xref="WormBase:WBGene00142163" mRNA join(<171242..171342,171567..171660,171710..171791, 171838..>171953) /locus_tag="CAEBREN_03438" /product="hypothetical protein" /db_xref="WormBase:CBN03438" /db_xref="WormBase:WBGene00142163" CDS join(171242..171342,171567..171660,171710..171791, 171838..171953) /locus_tag="CAEBREN_03438" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35044.1" /db_xref="WormBase:CBN03438" /db_xref="WormBase:WBGene00142163" /translation="MTGVGSNYLSHDPLSMSFAFIYILMSLICCVTTRNYDPICLRMC AVFSLLMTIASGYLVYQHSSQTQQVCLRKCVRAEDYFHTQLAIICGIQVLNCLISIVY SILSLRKSPKNQAYDRVKMEPEDLPVTI" assembly_gap 172311..182150 /estimated_length=9840 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<182945..>184128) /locus_tag="CAEBREN_17173" /db_xref="WormBase:WBGene00155898" mRNA complement(join(<182945..183620,183671..183854, 183901..184008,184053..>184128)) /locus_tag="CAEBREN_17173" /product="hypothetical protein" /db_xref="WormBase:CBN17173" /db_xref="WormBase:WBGene00155898" CDS complement(join(182945..183620,183671..183854, 183901..184008,184053..184128)) /locus_tag="CAEBREN_17173" /note="contains similarity to Pfam domain PF06309; contains similarity to Interpro domains IPR001270 (Chaperonin clpA/B), IPR010448 (Torsin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35070.1" /db_xref="InterPro:IPR001270" /db_xref="InterPro:IPR010448" /db_xref="PFAM:PF06309" /db_xref="WormBase:CBN17173" /db_xref="WormBase:WBGene00155898" /translation="MRAHYVLLLLLQIVGVNGELISVLTGTAIAIATGAFWGLKDKIK CQLYECCHEPDVNFNYHSLDADIANLLFGQHLVKDVVVNALKAHWHNENPKKPLVLSF HGYTGSGKNYVAEIIANNTFRQGLRSGFVQHIVATNDFPDKSKIEDYQMELRNRILST VQKCHRSLFIFDETDKLPEQLLGAIKPFLDYYSTISGVDFRRSVFILLSNKGGGKISD ITLKQYENGYPREQLRLESFERELMNFSFNEKGGLKMSELISNHLIDHFIPFLPLQRE HVKSCVDAYLRKRGRSDLVSNVDFVERVLNSLQYFPDSSKAFSSSGCKRVDAKTDLEL AKIRPQFQFDDEL" gene <187711..>189834 /locus_tag="CAEBREN_30311" /db_xref="WormBase:WBGene00192276" mRNA join(<187711..188211,188322..188957,189005..189420, 189470..189604,189687..>189834) /locus_tag="CAEBREN_30311" /product="hypothetical protein" /db_xref="WormBase:CBN30311" /db_xref="WormBase:WBGene00192276" CDS join(187711..188211,188322..188957,189005..189420, 189470..189604,189687..189834) /locus_tag="CAEBREN_30311" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35022.1" /db_xref="WormBase:CBN30311" /db_xref="WormBase:WBGene00192276" /translation="MSLSELSVLSARTAISFHEIDLEMLKENQKMMEEDEARMAVGEE AQVEETKRKVDEIPETFVFVAIDDQNLCNGIEENSFVYKSLVFRVKQVVDGGIRRVYL SVQPSTPAEWQLLVQLRIKTGSHSNVLNVVDKDVFKFDSFSYPLNVEVQSNEVKFLKF EMRVLNHMYLELPKFEDGDEIIEFDDGSRIRIHSNMLALLSEFMGKAEQEFISRSDCP AIKATSSEKEAFLELLYQAYPTRRPIYASFRRLTAGAVGYKCDTLIYHLSKHLIEYNF RPVSFRRAEQLIHEKHFQMTFIQRFQAAIENRLEPAIRELAFQAALDGTWNRMIQSGF EPENFCGRQVYTQIVCPAILLARNSKPDSTTLNPPENKLNFVELKDGDNTKSAILFRG TLFYINSGLLSAYGKEMLCIGQNGEYIARYTPEFHRECARGDLIPGEVLVQLLTYMHP MGDVPHPDMIRACIVFAHDHGWNVIKENLEQEFEPPITPDEYMSQLVFADKFGLENLI RINVQRAESSCREFAERLERHGQLKLLKDRTREGIMDRMCSGWGLNPMVNRLSTRVPT TFYHRTVGLQRGKAVVVGEGRAIDTLNSLASEHAFGEPNELIVLD" gene <191801..>196250 /locus_tag="CAEBREN_11825" /db_xref="WormBase:WBGene00150550" mRNA join(<191801..191964,192006..192124,193427..193525, 193577..193750,193796..193936,193980..194224, 194274..194880,194933..195095,195141..195250, 195296..195401,195447..196084,196132..>196250) /locus_tag="CAEBREN_11825" /product="hypothetical protein" /db_xref="WormBase:CBN11825" /db_xref="WormBase:WBGene00150550" CDS join(191801..191964,192006..192124,193427..193525, 193577..193750,193796..193936,193980..194224, 194274..194880,194933..195095,195141..195250, 195296..195401,195447..196084,196132..196250) /locus_tag="CAEBREN_11825" /note="contains similarity to Pfam domain PF00041; contains similarity to Interpro domains IPR008957 (Fibronectin type III domain), IPR003961 (Fibronectin, type III)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35087.1" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR008957" /db_xref="PFAM:PF00041" /db_xref="WormBase:CBN11825" /db_xref="WormBase:WBGene00150550" /translation="MFLLIFLLASYNSIASSSSILVDFTSHAIQPTPQAYIIEYSPPV GYPPSGSAVEGTTFHSLINGTISATEYTVSVSAILMDGTRQNVGELAVFSSPDAPTLD SIETTEHEATISYFPPQGQNITYHIEYYPEEHKEYSNAIDTKASLVRLRGLDSGTTFR LRIRSVYQGVFSQELIDSTFVTQGTANYDYSSSAELYSVRTLPPNFNLGLQTTTEMTS YEYSKEVEEDTSITTPLVAVITTATTPETTPSTINLQEISTTPYVPIITETVPLSTQT SAEITTTTTRKVTTTTTKPKAAPVEVNSGDLGEDHPTETSNALVDLSDMLQEYGHPSE ILLSDENDMLRLDWEAPENANCEAFFVNYTILTLSRPRSFSLATSDEHANIKMFPEHT LDIRVFCMLAGALSKTWWAHRIAHLSKPKPLENVRIAEVNTDEFYVASIKLMWDWPVY HDFERYKIVISYGIGRAESKEMEVTNKEEFVLLDKLEPSNLYSISVKNASTELSLTSK QVQLEQVTAPIISSTVYPGQISSNSININFGDSDPEQGRFDYYLLTFSGNNKNISKKV EMEHEKSFTFTKLIPGKTYQFSVYTVYKGVKSRPVSADITTYPLKVNQLFPVVGKDYV VLYWDIENFADSDCRFRLSYNADNIPTVSVELKGASRHRFSGLKPEVYYTFTITVIMG LGQAAAESESEMITVAIPKGRLSPSIHRQGSRELVVGFDNDLSVFSLLNGSPDNFAVI ISDDTSLNDDNYELKSWFEVKDEDVWGAYRASPSTWNPFDSERVRRAAFTVGTDDCVK RNLDEPYCNGILRAGTDYRVKIRMYTDTKVAMETDWGKIEGAKNSDDDEEEDEEEDDD RRFPCHMYLNGCRRKSSDNRFSLIPFIISIFLGFVHLL" gene <197778..>199011 /gene="Cbn-tomm-40" /locus_tag="CAEBREN_08391" /db_xref="WormBase:WBGene00147116" mRNA join(<197778..197933,197980..198054,198104..198188, 198235..198310,198357..198505,198554..198634, 198680..198839,198888..>199011) /gene="Cbn-tomm-40" /locus_tag="CAEBREN_08391" /product="CBN-TOMM-40 protein" /db_xref="WormBase:WBGene00147116" CDS join(197778..197933,197980..198054,198104..198188, 198235..198310,198357..198505,198554..198634, 198680..198839,198888..199011) /gene="Cbn-tomm-40" /locus_tag="CAEBREN_08391" /note="contains similarity to Pfam domain PF01459; contains similarity to Interpro domain IPR001925 (Porin, eukaryotic type)" /codon_start=1 /product="CBN-TOMM-40 protein" /protein_id="EGT35081.1" /db_xref="InterPro:IPR001925" /db_xref="PFAM:PF01459" /db_xref="WormBase:CBN08391" /db_xref="WormBase:WBGene00147116" /translation="MATPTESEFVSPIPQTNPGSYEELHRKARDVFPTCFEGAKLMVN KGLSSHFQVSHTLSLSAMNTGYRFGATYVGTNQVGPAEAYPILLGDTDVNGNTTATIL HQFGIYRTKLQGQIQQGKLAGAQATIERKGRLSTLGLTLANIDLVNEAGILVGQFLRR LTPRLDVGTEMVYQYGKNIPGGQISVLSYAARYTANHFIAAATLGASGVHLTYYHKQH ENLAFGVEFECNANVGEAVTTLAYQTELPEEGVTMRASFDTNWSVGGVFEKRLSQQLP FTLALSGTLNHVKAAGKFGIGLIIG" gene complement(<199453..>200783) /locus_tag="CAEBREN_08958" /db_xref="WormBase:WBGene00147683" mRNA complement(join(<199453..199610,199653..199813, 199861..199932,200171..200283,200337..200458, 200506..200590,200647..200707,200752..>200783)) /locus_tag="CAEBREN_08958" /product="hypothetical protein" /db_xref="WormBase:CBN08958" /db_xref="WormBase:WBGene00147683" CDS complement(join(199453..199610,199653..199813, 199861..199932,200171..200283,200337..200458, 200506..200590,200647..200707,200752..200783)) /locus_tag="CAEBREN_08958" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35072.1" /db_xref="WormBase:CBN08958" /db_xref="WormBase:WBGene00147683" /translation="MSSVSEKDQKILDDFDYGDDVSIIDRSEIVDWSAIIIKVCLGLL FIGFATGCIIYSVITSEEYQHPASTNSTFFVFDVSQHCDNGTLTWTNRTGSANDYDKI STGIAWLQDATRKRIYHRIGIAADNKDWQVTHYVFMNHTFIVDRNNCSKQSFGYDEYL RKMGFQKIRMQRVESISIGEEESVKVNYFEGEPSRDIQIEGMHPILIRAFTQPDNTFT YAWEYIFSQPSNDETGLFRKDYWYPEMKAGVDDEGVFEELPASCYKDST" assembly_gap 201527..201961 /estimated_length=435 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <202120..>203851 /locus_tag="CAEBREN_28567" /db_xref="WormBase:WBGene00190532" mRNA join(<202120..202122,202288..202373,202420..202864, 202944..203222,203312..>203851) /locus_tag="CAEBREN_28567" /product="hypothetical protein" /db_xref="WormBase:CBN28567" /db_xref="WormBase:WBGene00190532" CDS join(202120..202122,202288..202373,202420..202864, 202944..203222,203312..203851) /locus_tag="CAEBREN_28567" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35026.1" /db_xref="WormBase:CBN28567" /db_xref="WormBase:WBGene00190532" /translation="MVKLLQRKEEKKEAFFEKVKAVENGGPIPKLQTEDGLGPAVDEP KRVFLRRPKDGFASANVVESPPPTTTSPEDQPISRSRPHHKSNQRDQKQPAQTYEERQ AAYQAARNRILGTEYKPDNQEIKEIKFIDRSKSPETLKMTQQNMVEHYGEELSRELMQ QPVENFMAPQVQFVPDFSHPPPYLSLQDRCAAYNGPHGYQTMSQNVPQSQQQHQFIEN PYYMQVNGQMPVQYVQNQMPHFIPQDPSAVSPSPQGYMDSNPYYYCQPNQQQMNYVAG NLPNMAYPPPNFPPQGHQNQQIMNQMNSQQMLQMRPMNGPMLNQFQVLPGLSRPNNPS VHGASPSLGPGRVQNKQQMMFQSDSGPPMKPPSLMSNMQEKNTHKNGGQPRQFHNQQN GQFNQNQNSNFNGMTNGRKQSNKNSRAQQKGNDILMNKNNFNYPHPSVSNVQNPIPFG " gene complement(<204620..>206065) /locus_tag="CAEBREN_00563" /db_xref="WormBase:WBGene00139288" mRNA complement(join(<204620..204685,204729..205051, 205097..205216,205270..205527,205574..205686, 205735..205810,205874..205997,206045..>206065)) /locus_tag="CAEBREN_00563" /product="hypothetical protein" /db_xref="WormBase:CBN00563" /db_xref="WormBase:WBGene00139288" CDS complement(join(204620..204685,204729..205051, 205097..205216,205270..205527,205574..205686, 205735..205810,205874..205997,206045..206065)) /locus_tag="CAEBREN_00563" /note="contains similarity to Pfam domain PF03839; contains similarity to Interpro domain IPR004728 (Translocation protein Sec62)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35054.1" /db_xref="InterPro:IPR004728" /db_xref="PFAM:PF03839" /db_xref="WormBase:CBN00563" /db_xref="WormBase:WBGene00139288" /translation="MAPRNQKGIPSEEDIKMTNEQEGVAKYLRFNCPTATTLFEGNEV HYFSGNKAVDTLWESKYGNKAKKDPMFKTRDDCFHYICELNSKGIFFRAKKLVAKKKE NKEKGNDSSAEVTKSPKGTVEKRNKKEKAKEEETATEAEGDEKEVKKDDAKEEEKKKK KVKLLVHEIQTFVDDKDVYVWIFDPTPLFKKVIGVLMLIGTIVGCLFPLWPAWLRQGV YYVSITGIGCFAAIIVTAILRTILFGIIYALTFGKHKLWVLPNLTEDCGVLESFQPWY TYEYCGDEKKESKTDKKEKKKKMKKEKNSDAEDVEEAVVETEKNYEEDDDSEKNSQAS TDDNYEKIGDEEFSAPPSPSEGAARKRRPTKI" gene <206347..>207115 /locus_tag="CAEBREN_00163" /db_xref="WormBase:WBGene00138888" mRNA join(<206347..206477,206527..206566,207002..>207115) /locus_tag="CAEBREN_00163" /product="hypothetical protein" /db_xref="WormBase:CBN00163" /db_xref="WormBase:WBGene00138888" CDS join(206347..206477,206527..206566,207002..207115) /locus_tag="CAEBREN_00163" /note="contains similarity to Interpro domain IPR012576 (NADH:ubiquinone oxidoreductase, B12 subunit)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35059.1" /db_xref="InterPro:IPR012576" /db_xref="WormBase:CBN00163" /db_xref="WormBase:WBGene00138888" /translation="MGGGHHEPFKIPNYSIYNNYRDFPQLAQHEKRLAQIGLKDPWIR NYVYLYDRKYPHVLILPGWKAGVAFTAALILVEEAYQYKTHGTTSWDAHH" gene complement(<209628..>210242) /locus_tag="CAEBREN_11606" /db_xref="WormBase:WBGene00150331" mRNA complement(join(<209628..209666,209715..210053, 210105..>210242)) /locus_tag="CAEBREN_11606" /product="hypothetical protein" /db_xref="WormBase:CBN11606" /db_xref="WormBase:WBGene00150331" CDS complement(join(209628..209666,209715..210053, 210105..210242)) /locus_tag="CAEBREN_11606" /note="contains similarity to Pfam domain PF00036; contains similarity to Interpro domains IPR011992 (EF-hand-like domain), IPR002048 (Calcium-binding EF-hand), IPR018248 (EF-hand), IPR018247 (EF-Hand 1, calcium-binding site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35051.1" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR018247" /db_xref="InterPro:IPR018248" /db_xref="PFAM:PF00036" /db_xref="WormBase:CBN11606" /db_xref="WormBase:WBGene00150331" /translation="MSNDPRRVSLFNRWASKQNNEPVSGFEGLNEEEIMEYKAAFRLF DKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGSGTIDFGEFCQMMKRMNK ENDSEMIREAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQEVDEIIAEIDIDGDGQI DYEEFASTFSA" assembly_gap 212264..212273 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <216924..>220066 /locus_tag="CAEBREN_01471" /db_xref="WormBase:WBGene00140196" mRNA join(<216924..217045,218514..218610,218668..218735, 219056..219341,219385..219647,219692..219941, 219989..>220066) /locus_tag="CAEBREN_01471" /product="hypothetical protein" /db_xref="WormBase:CBN01471" /db_xref="WormBase:WBGene00140196" CDS join(216924..217045,218514..218610,218668..218735, 219056..219341,219385..219647,219692..219941, 219989..220066) /locus_tag="CAEBREN_01471" /note="contains similarity to Pfam domain PF00100; contains similarity to Interpro domain IPR001507 (Endoglin/CD105 antigen)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35065.1" /db_xref="InterPro:IPR001507" /db_xref="PFAM:PF00100" /db_xref="WormBase:CBN01471" /db_xref="WormBase:WBGene00140196" /translation="MNWRFSMLLLLLLCFDGPGIKCQEEEETLPRNEVLGEPTVSCAA DAIYVKLRTKSTFLGHVDVKYTPDKSCFQSLVTNNQIEILIPHEECMVPRRRSLHPTG VILEVSLSVSFHPEFTTVDDRIFNMQCFHQKKSNGSSSSLAIGSPQPPPTDTKGPSCS YEVLTSPEGSPAGRLALGQNVYHSWQCQNVYESCIMIESCQLVGGEETHEVIDSSGCS KHESIMPQLEYHNRTHVGASVKVFGVSHTSIVYFACQVRLHPQLPTGECPKPKCDLMR RKRDESSSQFPSIDVRSQNLEISQLINVTSSTESQIPSESFVQHTCPDIHVESAPAEE ASESKLIEEEKICADFRSVLIVSILLTMALIIITTTIVVLIVRRQKYEIASMS" gene <222750..>223894 /gene="Cbn-set-17" /locus_tag="CAEBREN_17119" /db_xref="WormBase:WBGene00155844" mRNA join(<222750..222815,222872..222974,223026..223091, 223258..223617,223665..223757,223806..>223894) /gene="Cbn-set-17" /locus_tag="CAEBREN_17119" /product="CBN-SET-17 protein" /db_xref="WormBase:WBGene00155844" CDS join(222750..222815,222872..222974,223026..223091, 223258..223617,223665..223757,223806..223894) /gene="Cbn-set-17" /locus_tag="CAEBREN_17119" /note="contains similarity to Interpro domain IPR001214 (SET domain)" /codon_start=1 /product="CBN-SET-17 protein" /protein_id="EGT35053.1" /db_xref="InterPro:IPR001214" /db_xref="WormBase:CBN17119" /db_xref="WormBase:WBGene00155844" /translation="MNGTAIPGLGTPDALKMEKAEKKSYKLVVDYRDGAISIIDGRDL VEGLHREIQDLADQDVEILGTEIEDSAYDENLDIHCDKCKKFYRPYCRMHPLFKIPDR IPKPDKKDSSYSRQTLPLLFRIEKSKLPNAGYGVIADVFIPVGMVFGPYKGQRVQKKS DFLADGYAWLIKCGEKKFYIDGSDEERSNWLRFINSPRHEDEQNMVAFQTNGKIFYRV IKPIRINQELLVWYGSKFGGEFVEGEEGKPKKPNKNPFIW" gene complement(<224673..>243511) /locus_tag="CAEBREN_01947" /db_xref="WormBase:WBGene00140672" mRNA complement(join(<224673..224818,224865..225067, 225175..225619,225706..225886,240302..240586, 240633..241946,241992..242286,242335..242447, 242745..242944,242999..243283,243331..243430, 243479..>243511)) /locus_tag="CAEBREN_01947" /product="hypothetical protein" /db_xref="WormBase:CBN01947" /db_xref="WormBase:WBGene00140672" CDS complement(join(224673..224818,224865..225067, 225175..225619,225706..225886,240302..240586, 240633..241946,241992..242286,242335..242447, 242745..242944,242999..243283,243331..243430, 243479..243511)) /locus_tag="CAEBREN_01947" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35043.1" /db_xref="WormBase:CBN01947" /db_xref="WormBase:WBGene00140672" /translation="MNSPEESAVTDLSKLVANVLNGMLDENATAFELIRYQFHVRSVK DVIRRGSEDTSLIDQIYDLLHNLIIYLNEEIIDTSLNATPSGFADYHFQQLNKRIQLL YEVWKGMQVNEAYKAPELTNHIDACKEAMKHCYEKCKEYPRWTELSDELREFFLDEKK EEKSVIEEVQPTLFAREDGVVSSIAHEKANSEEEGKKTQFVSMAEKVLSNYRAKNPDY KTMRVLINTERKFQLEGIYCDKLINEFISVWDMAIDYETEKPEHKYLFTGLLKKIFIM MSDQRRNDFAIKLFDKYNQDSNDVLPCLENFVENFQIGFTEAVNQLPVDSNAISNNLE LYEKIKAPIVWYLFISPAYTVQQLLNMCVDNKGYIPTVSRIFRTMPTLFERLVKVTPL PFEDGKKEKLLITMLHRVFMIGRTTWKSATQWEHAAMMTVSFAKERKRKEGQPERNED KALIDPFSLVNFALSQIFESRKPAKSVEIFVKLLQRVLANNNNARMLTNYRFANSFSD EGDNVLGTPIIIQLMFDLLMEFDGQSLDVCDGAREILKSIGGRMEHDNTVFDTDTRKY LTEDNFNSAPWWIKYSIYTWYSSALQKPKRQVPSGVYKTIPEQFLDDFEQIKSEDEST VSDCYMRSLFELGLYDVDLAIDLLNYGYGVKFEQNVLEKMALALVDSYGKKMARRNGG LHIGKLISAMLKMFDPVRELAPLSSYCENYLESVKRTEHLLILFKATRIAKEKQLCAS RVRTNDEKQTAYDDILSMNEVAEQLMDVFCETTKNYVDSEAKAIEEFRREADNIIFSK GCGPDQIRAMVERDEREKSLILQLTMIYLNCSHFCRLYQQVPVKLQQLMNSTLEKQFD LQKLLAKKVMDDVLTDQRKTEVVYAFAEPKDQVIVQVAKDAVQPVKASELFVSKQHNS QVPGSSGNISAENVMFNQNNGDYHEKGYNTGNRNNYRKTMYENERPSSSRVGGRNERT NSFRGNRWNPVNDTHAFNARDRDVIYKNTRHSSNNEYDRNPPRNGNSKNSYDQDTLYY DDRRTPFKPQSDRAYDDIRGYSESRDSNYENGWDNRSRRWPSESDYSHDDCENRMLDQ TVRSVRQFSNREQHQNFSKPGCSNSPSTKIQEGKQSKKFGEYNKFQGNSRRPVENRKP RYPSSNYNEQEEENLANKMKLGQPAREELADAMGFNDTPPPVQKPRRGGFRNH" assembly_gap 228575..229038 /estimated_length=464 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<230359..>231814) /locus_tag="CAEBREN_22407" /db_xref="WormBase:WBGene00161132" mRNA complement(join(<230359..230631,230676..231622, 231730..>231814)) /locus_tag="CAEBREN_22407" /product="hypothetical protein" /db_xref="WormBase:CBN22407" /db_xref="WormBase:WBGene00161132" CDS complement(join(230359..230631,230676..231622, 231730..231814)) /locus_tag="CAEBREN_22407" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR020810 (Enolase, C-terminal), IPR020811 (Enolase, N-terminal), IPR020809 (Enolase, conserved site), IPR000941 (Enolase), IPR022662 (Methylaspartate ammonia-lyase, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35057.1" /db_xref="InterPro:IPR000941" /db_xref="InterPro:IPR020809" /db_xref="InterPro:IPR020810" /db_xref="InterPro:IPR020811" /db_xref="InterPro:IPR022662" /db_xref="WormBase:CBN22407" /db_xref="WormBase:WBGene00161132" /translation="MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVH EALELRDGDKAVHLGKGVLKAVTNINEKIAPALIAKGFDVTAQKEIDDFMLALDGTEN KASLGANAILGVSLAVAKAGAVHKGLPLYKYIAELAGTGKVVLPVPAFNVINGGSHAG NKLAMQEFMILPVGASSFAEAMRMGSEVYHHLKAEIKKRYGLDATAVGDEGGFAPNIQ DNKEGLDLLNTAIDKAGYTGKISIGMDVAASEFYKDGKYDLDFKNDASDASKWLSGDQ LAELYQSFIKEYPVVSIEDAFDQDDWDNWGKLSAATTIQLVGDDLTVTNPKRIRTAID KKSCNCLLLKVNQIGSVTESIEAAKLSRANGWGVMVSHRSGETEDTFIADLVVGLATG QIKTGAPCRSERLAKYNQLLRIEEELGADAVYAGQNFRNPQV" gene complement(<233115..>234062) /locus_tag="CAEBREN_03236" /db_xref="WormBase:WBGene00141961" mRNA complement(join(<233115..233240,233288..233486, 233533..>234062)) /locus_tag="CAEBREN_03236" /product="hypothetical protein" /db_xref="WormBase:CBN03236" /db_xref="WormBase:WBGene00141961" CDS complement(join(233115..233240,233288..233486, 233533..234062)) /locus_tag="CAEBREN_03236" /note="contains similarity to Pfam domain PF10501; contains similarity to Interpro domain IPR018305 (39S ribosomal subunit, protein L50, mitochondria)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35063.1" /db_xref="InterPro:IPR018305" /db_xref="PFAM:PF10501" /db_xref="WormBase:CBN03236" /db_xref="WormBase:WBGene00141961" /translation="MHRTVPRFIRSQGNVLKGFFGKGGEKETVKQLTVEEQESLRKTL PSIRARESTQVSAPSDSVTDFDDDLFDNRIDTDSIRARGFLKYTQNYTPSTEVKDLVF ETASKCLQAAGITVKNVEEYQFADGDNSVKFEILNRLGNSIKHWPTNGKLVHLKTVED VANFYQEPVKNVTKYTEMARDERNPKNVSIMEQAVRFHPEDTHMYHGGVTAFPGSGGE VISLRQKRLLRQFQPKKEWFDYDDLTFDYSRADKNMPWDPEVAKQMDKYTDKRYNLKT KQFTRIQQ" gene complement(<234416..>236186) /locus_tag="CAEBREN_05455" /db_xref="WormBase:WBGene00144180" mRNA complement(join(<234416..234588,234635..235235, 235279..235847,235894..236011,236058..>236186)) /locus_tag="CAEBREN_05455" /product="hypothetical protein" /db_xref="WormBase:CBN05455" /db_xref="WormBase:WBGene00144180" CDS complement(join(234416..234588,234635..235235, 235279..235847,235894..236011,236058..236186)) /locus_tag="CAEBREN_05455" /note="contains similarity to Pfam domain PF00118; contains similarity to Interpro domains IPR017998 (Chaperone, tailless complex polypeptide 1), IPR002194 (Chaperonin TCP-1, conserved site), IPR001844 (Chaperonin Cpn60), IPR002423 (Chaperonin Cpn60/TCP-1), IPR012716 (T-complex protein 1, beta subunit)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35033.1" /db_xref="InterPro:IPR001844" /db_xref="InterPro:IPR002194" /db_xref="InterPro:IPR002423" /db_xref="InterPro:IPR012716" /db_xref="InterPro:IPR017998" /db_xref="PFAM:PF00118" /db_xref="WormBase:CBN05455" /db_xref="WormBase:WBGene00144180" /translation="MLPVQILKDSAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMD KILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVL AAELLKEAEKLVNQRIHPQTIISGYRRALGIAQEALKKSSIESGDNIREDLLKIARTT LGSKILSQHKEHFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSMNESYLDEGFLLEKLP GMFQPRRVEKAKILIANTPMDTDKVKVFGSRVRVDGVAKVAELEAAEKLKMKEKVDKI LGHNCNVFINRQLIYNYPEQLFADAKVMAIEHADFEGIERLALVLGGEIVSTFDSPQT AQFGYCDLIEEIMIGEDRLLRFSGVKLGEACSVVLRGATQQILEESERSLHDALCVLV THVKESKTVAGAGASEILMSTAIAMEAQKVAGKEALAVEAFGRALAQLPTIICDNAGL DSAELVTRLRAEHANGRHSFGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQI LRVDDIIKAAPRARAQDNRPC" assembly_gap 237752..237761 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 238787..238796 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 239952..240122 /estimated_length=171 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<244434..>245889) /locus_tag="CAEBREN_18669" /db_xref="WormBase:WBGene00157394" mRNA complement(join(<244434..244706,244751..245697, 245805..>245889)) /locus_tag="CAEBREN_18669" /product="hypothetical protein" /db_xref="WormBase:CBN18669" /db_xref="WormBase:WBGene00157394" CDS complement(join(244434..244706,244751..245697, 245805..245889)) /locus_tag="CAEBREN_18669" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR020810 (Enolase, C-terminal), IPR020811 (Enolase, N-terminal), IPR020809 (Enolase, conserved site), IPR000941 (Enolase), IPR022662 (Methylaspartate ammonia-lyase, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35078.1" /db_xref="InterPro:IPR000941" /db_xref="InterPro:IPR020809" /db_xref="InterPro:IPR020810" /db_xref="InterPro:IPR020811" /db_xref="InterPro:IPR022662" /db_xref="WormBase:CBN18669" /db_xref="WormBase:WBGene00157394" /translation="MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVH EALELRDGDKAVHLGKGVLKAVTNINEKIAPALIAKGFDVTAQKEIDDFMLALDGTEN KASLGANAILGVSLAVAKAGAVHKGLPLYKYIAELAGTGKVVLPVPAFNVINGGSHAG NKLAMQEFMILPVGASSFAEAMRMGSEVYHHLKAEIKKRYGLDATAVGDEGGFAPNIQ DNKEGLDLLNTAIDKAGYTGKISIGMDVAASEFYKDGKYDLDFKNDASDASKWLSGDQ LAELYQSFIKEYPVVSIEDAFDQDDWDNWGKLSAATTIQLVGDDLTVTNPKRIRTAID KKSCNCLLLKVNQIGSVTESIEAAKLSRANGWGVMVSHRSGETEDTFIADLVVGLATG QIKTGAPCRSERLAKYNQLLRIEEELGADAVYAGQNFRNPQV" gene complement(<247187..>248134) /locus_tag="CAEBREN_01822" /db_xref="WormBase:WBGene00140547" mRNA complement(join(<247187..247312,247360..247558, 247605..>248134)) /locus_tag="CAEBREN_01822" /product="hypothetical protein" /db_xref="WormBase:CBN01822" /db_xref="WormBase:WBGene00140547" CDS complement(join(247187..247312,247360..247558, 247605..248134)) /locus_tag="CAEBREN_01822" /note="contains similarity to Pfam domain PF10501; contains similarity to Interpro domain IPR018305 (39S ribosomal subunit, protein L50, mitochondria)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35040.1" /db_xref="InterPro:IPR018305" /db_xref="PFAM:PF10501" /db_xref="WormBase:CBN01822" /db_xref="WormBase:WBGene00140547" /translation="MHRTVPRFIRSQGNVLKGFFGKGGEKETVKQLTVEEQESLRKTL PSIRARESTQVSAPSDSVTDFDDDLFDNRIDTDSIRARGFLKYTQNYTPSTEVKDLVF ETASKCLQAAGITVKNVEEYQFADGDNSVKFELLNRLGNSMKHWPTNGKLVHLKTVED VANFYQEPVKNVTKYTEMARDERNPKNVSIMEQAVRFHPEDTHMYHGGVTAFPGSGGE VISLRQKRLLRQFQPKKEWFDYDDLTFDYSRPDKNMPWDPEVAKQMDKYTDKRYNLKT KQFTRIQQ" gene complement(<248490..>249919) /locus_tag="CAEBREN_18976" /db_xref="WormBase:WBGene00157701" mRNA complement(join(<248490..248662,248709..249309, 249353..>249919)) /locus_tag="CAEBREN_18976" /product="hypothetical protein" /db_xref="WormBase:CBN18976" /db_xref="WormBase:WBGene00157701" CDS complement(join(248490..248662,248709..249309, 249353..249919)) /locus_tag="CAEBREN_18976" /note="contains similarity to Interpro domains IPR017998 (Chaperone, tailless complex polypeptide 1), IPR002194 (Chaperonin TCP-1, conserved site), IPR012716 (T-complex protein 1, beta subunit), IPR002423 (Chaperonin Cpn60/TCP-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35067.1" /db_xref="InterPro:IPR002194" /db_xref="InterPro:IPR002423" /db_xref="InterPro:IPR012716" /db_xref="InterPro:IPR017998" /db_xref="WormBase:CBN18976" /db_xref="WormBase:WBGene00157701" /translation="MSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGY RRALGIAQEALKKSSIESGDNIREDLLKIARTTLGSKILSQHKEHFAQLAVDAVLRLK GSGNLDAIQIIKKLGGSMNESYLDEGFLLEKLPGMFQPRRVEKAKILIANTPMDTDKV KVFGSRVRVDGVAKVAELEAAEKLKMKEKVDKILGHNCNVFINRQLIYNYPEQLFADA KVMAIEHADFEGIERLALVLGGEIVSTFDSPQTAQFGYCDLIEEIMIGEDRLLRFSGV KLGEACSVVLRGATQQILEESERSLHDALCVLVTHVKESKTVAGAGASEILMSTAIAM EAQKVAGKEALAVEAFGRALAQLPTIICDNAGLDSAELVTRLRAEHANGRHSFGIDIE KGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIKAAPRARAQDNRPC" gene <251682..>252890 /locus_tag="CAEBREN_25271" /db_xref="WormBase:WBGene00163996" mRNA join(<251682..251887,252196..252460,252504..>252890) /locus_tag="CAEBREN_25271" /product="hypothetical protein" /db_xref="WormBase:CBN25271" /db_xref="WormBase:WBGene00163996" CDS join(251682..251887,252196..252460,252504..252890) /locus_tag="CAEBREN_25271" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35074.1" /db_xref="WormBase:CBN25271" /db_xref="WormBase:WBGene00163996" /translation="MMYQGNRITDGNSRAQSSKIINGDGLTAERLEQLSTHSNKGVIE EEATSGRSTGSSNTEADPFDSVPTRAPPSSRDYEEEPYSRRKHHKKHRKSHRGYYYGS PYTQYYQQRHDPALYRVYPGLHPKDGRYCSDMKAMFAYTCAPSKPLRIDLVEFCKDYS AFCNVPNFHRLPGPRMGPPLTDKGVGHVDVNGHFGFGVGAVPGMEVGVGWGVDVGPIP GMGESVGVGVGLDLGIMGAKTPEAFRRGQDDPNAKGGGIVGINGGVGVKAPGTGDGVG VGTGLGVGK" gene complement(<253268..>254992) /locus_tag="CAEBREN_06778" /db_xref="WormBase:WBGene00145503" mRNA complement(join(<253268..253481,253790..253926, 254846..>254992)) /locus_tag="CAEBREN_06778" /product="hypothetical protein" /db_xref="WormBase:CBN06778" /db_xref="WormBase:WBGene00145503" CDS complement(join(253268..253481,253790..253926, 254846..254992)) /locus_tag="CAEBREN_06778" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35079.1" /db_xref="WormBase:CBN06778" /db_xref="WormBase:WBGene00145503" /translation="MTATTSTSTSSHRFASEPRPAALTKRRDDRIRTFNSFDDITESE EEDIQEPTSSNSSTTSERSPYAVYEQEKLSAAKMRSFSLTNNPFLSPKAMRQFFPPTP RLSRGFSDPIVRRKSSLPTILSCHSPDHSDDFLGLPPIPEATTPASPSTNAPANNPFQ RNDST" assembly_gap 257607..257616 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 266182..266191 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 266938..266947 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<271335..>273716) /locus_tag="CAEBREN_29042" /db_xref="WormBase:WBGene00191007" mRNA complement(join(<271335..271349,272027..272110, 272426..273212,273259..>273716)) /locus_tag="CAEBREN_29042" /product="hypothetical protein" /db_xref="WormBase:CBN29042" /db_xref="WormBase:WBGene00191007" CDS complement(join(271335..271349,272027..272110, 272426..273212,273259..273716)) /locus_tag="CAEBREN_29042" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000832 (GPCR, family 2, secretin-like), IPR000203 (GPS domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35029.1" /db_xref="InterPro:IPR000203" /db_xref="InterPro:IPR000832" /db_xref="WormBase:CBN29042" /db_xref="WormBase:WBGene00191007" /translation="MTPLDVTVPITGTDKTEVRKRRVVSRIVGASLIEDGKEMQVEKL EQPVRITFYHKESAVRHMSSPTCVWWNHHELKWNPSGCRLNSHNKTMTSCDCNHLTHF AVLMDVRGHDLDEVDETLLTLLTYIGCIISIVSLLATFFAYLIFSRNGGDRVFIHENL CLSLAIAEITFLIGITRTENSVQCGLIAAALMYMFLTALTWMLLEGYHIHRMLTEVFP SEPRRFRYMLFGYIPPAIITGIAYVYNSEGFGTSDHCWLTTQNHFIWFFAGPACFIFC CNSLVLVKTLCTVYQHTSGGYLPCRHDVDSGRSIRNWIKGSMALASLLGVTWLFGLFW IEDYRSIVMAYAFTISNSLQGLFIFLFHVVFAEKMRKDFGHWLYRRGCGGSSDSSPNH KRHNVPRDLMSPGMNSSTGSEFLYNTNDKYLTNSDTTNRLSITIECRILSNIPLC" assembly_gap 271500..271989 /estimated_length=490 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 273775..273784 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<276743..>286508) /locus_tag="CAEBREN_01133" /db_xref="WormBase:WBGene00139858" mRNA complement(join(<276743..277122,277174..277309, 277624..278410,278457..279706,279781..279869, 279968..280080,283545..283734,286226..>286508)) /locus_tag="CAEBREN_01133" /product="hypothetical protein" /db_xref="WormBase:CBN01133" /db_xref="WormBase:WBGene00139858" CDS complement(join(276743..277122,277174..277309, 277624..278410,278457..279706,279781..279869, 279968..280080,283545..283734,286226..286508)) /locus_tag="CAEBREN_01133" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000922 (D-galactoside/L-rhamnose binding SUEL lectin), IPR001879 (GPCR, family 2, extracellular hormone receptor domain), IPR022624 (Domain of unknown function DUF3497), IPR000832 (GPCR, family 2, secretin-like), IPR000203 (GPS domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35073.1" /db_xref="InterPro:IPR000203" /db_xref="InterPro:IPR000832" /db_xref="InterPro:IPR000922" /db_xref="InterPro:IPR001879" /db_xref="InterPro:IPR022624" /db_xref="WormBase:CBN01133" /db_xref="WormBase:WBGene00139858" /translation="MRRSKFTHLLFSTLFLTSCLIVGTTSASSKATTDENGECFHFLK ENSVVYIPFATRKNNTIIYKARLYKKYASLKLKKIEVPNQLVPMDCVKQESTISQTYC DGAPAELSCPAGKVISIVLGNYGRFSVTICLPPENDVIPTNNNCQNPKTKSILEKKCN GQSMCEFRVDNKTFNEDPCPNTPKYLEVKYDCVVLATTTTTTTTIPTTTTDSSLISDE EEEESQKDALNSEILKPKKKEDVFCLATNRRGVNWQNTKAGTTSSAPCPEGSSGKQLW MCTKEGQWLTEHPNTAGCESVWVESMSTYLTEVIRTEDASGLPEFLRKLGSETRRPLV GGDLPRVIRLLEKTVDVIAEEPWAFKHLQLTNKRLVEVMNYMLRNQEIWGSWEVRKRK EFASQFILATEKAMIVSAKGMQSSVESNVLVQPAITVEISHKIKMSSQPTDYILFPSA ALWNGQNVDNVNIPRDAILKVSQDETQVFFSSFDNIGHQMTPLDVTVPITGTDKTEVR KRRVVSRIVGASLIEDGKEMQVEKLEQPVRITFYHKESAVRHMSSPTCVWWNHHELKW NPSGCRLNSHNKTMTSCDCNHLTHFAVLMDVRGHDLDEVDETLLTLLTYIGCIISIVS LLATFFAYLIFSRNGGDRVFIHENLCLSLAIAEITFLIGITRTENSVQCGMIAAALMY MFLTALTWMLLEGYHIHRMLTEVFPSEPRRFRYMLFGYIPPAIITGIAYVYNSEGFGT SDHCWLTTQNHFIWFFAGPACFIFCCNSLVLVKTLCTVYQHTSGGYLPCRHDVDSGRS IRNWIKGSMALASLLGVTWLFGLFWIEDYRSIVMAYAFTISNSLQGLFIFLFHVVFAE KMRKDFGHWLYRRGCGGSSNSSPNHKRHNVPRDLMSPGMNSSTGSEFLYNTNDKYLTN SDTTNRLVYNNRMPHPNQISVYQQHPHHQLYEQQPGTYDYATIAYGDMMPGHMNRIAA PPAYQRLAVAEGRYGSQHQLYQGWHHRPPPEFSPPPPPPTSAPSNPRHYGTGSSGRRP PSSKMSDDSAYSDGSSSMLTTEVTPQGQTVLRIDLNKPSMYCQDL" gene complement(<281233..>281876) /locus_tag="CAEBREN_14042" /db_xref="WormBase:WBGene00152767" mRNA complement(join(<281233..281284,281752..>281876)) /locus_tag="CAEBREN_14042" /product="hypothetical protein" /db_xref="WormBase:CBN14042" /db_xref="WormBase:WBGene00152767" CDS complement(join(281233..281284,281752..281876)) /locus_tag="CAEBREN_14042" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35039.1" /db_xref="WormBase:CBN14042" /db_xref="WormBase:WBGene00152767" /translation="MGSCSWGKIEGEPCVKKKGLCRRHAQEEGLYMEGCGEPGGRRGE GKPSREWKFGCVAR" gene complement(<290897..>291208) /locus_tag="CAEBREN_22660" /db_xref="WormBase:WBGene00161385" mRNA complement(<290897..>291208) /locus_tag="CAEBREN_22660" /product="hypothetical protein" /db_xref="WormBase:CBN22660" /db_xref="WormBase:WBGene00161385" CDS complement(290897..291208) /locus_tag="CAEBREN_22660" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35010.1" /db_xref="WormBase:CBN22660" /db_xref="WormBase:WBGene00161385" /translation="MMDVGLGTQYFHFLLLKNLHISCPVARLKKFLFRSMFLTLIHCL NNACQSKYSPGADLSIRLSADWTGAKTKGLPIIVFFFLRKRLFYEIFINYYPDVFANI W" gene complement(<293611..>298484) /locus_tag="CAEBREN_00096" /db_xref="WormBase:WBGene00138821" mRNA complement(join(<293611..293675,293726..294170, 294216..294294,294754..295368,295439..295722, 295769..295863,295972..296030,296074..296131, 296280..297908,298009..298119,298165..298216, 298419..>298484)) /locus_tag="CAEBREN_00096" /product="hypothetical protein" /db_xref="WormBase:CBN00096" /db_xref="WormBase:WBGene00138821" CDS complement(join(293611..293675,293726..294170, 294216..294294,294754..295368,295439..295722, 295769..295863,295972..296030,296074..296131, 296280..297908,298009..298119,298165..298216, 298419..298484)) /locus_tag="CAEBREN_00096" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35037.1" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="WormBase:CBN00096" /db_xref="WormBase:WBGene00138821" /translation="MSDWGNAFDEQCRSEGLEVPEKTEKKQSNSEMDPNEENKGFNSG GISRGGMFGGGPKMNAPPPQTSFGATSGTRVGGSYGSTGPDGRGAAIGSSDEINGGGN VISVGLRKEKPACNFSRGGGFGSNRNTALPPVKSSHEGGRFGAMATKNFDSLISSDNF PIQSKAGGRFGATQASTSHMSIGGRFGSKQPASSTPLDSGLGPGSTPDSSSASSIDGS FVVAKNSLSRTSVGGAFGAKSSPSHVTVTSLGGNSKDLPQPTSTSTPAGTFQSTYSQK NLTPVGGSFGAKVADTSVHITTATDSSDSLKKTMNNTRSSGFTGSNFKTAQLPSGPAF VGGSFGSKDSISSTNLTTTALGQHSTVTENTPQSTSALGSFCFSVQSTKASRGSFGSS IRPTVPSSEEFEVRPTLERKDSIESSSGNSSMMGGATTATAGGGFHSIHYGNTQPKPT VGGSFGASKSSSGVSIGGAFGKTSSGVSIPPHFNVPPPTLSNINRSNLDYPQEKDKSV SIPGPNFKAEASFGLKTTENMKEEKPTFESCFGKSNPSNNSNSSPFGRPPQSVEKNFE EKENVASFTPETGENSHFNTTNDTSKKPSFGPLETKRELGANSSVSNAREESYVPFMP GAPTPMRGGFQGAFRGGRGSGGGGQMDFGSGGQGQMGRGRGQSTQSFVPQQRPTPPSL TSNQAVRPDPKYKYTKSTDETHEKVPIPADIALLNKFIQKEVKMMKDTVVDVQRQDPK SPLYSISSFRELRLKPEVLQALDTLNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTG KTAAFVLTMLCRIDVNLKCPQCICLAPTLELAKQIGEVVEKMGKYMENLKIHYAIKGG NLAAMRGRKLTEQIVIGTPGIVSFNFEKKLRIIAIFQTREYLQKYKCIDPSQIRCLVL DEADVMIYHQGFTDISTTIYKYVCCHLYIYHIIMINYYSMVEEASESVQSMLFSATYD EPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQCASRDSKFAAIVNLYSGLAVASS VIFCHTKASVMWLYENMKARGHQVDVLHGDMTVVERADTIIRFKRGDFKVLITTNVFA RGIDVAQVSVVINYDLPIKYDEQGSPMVIEGFTQPDCETYLHRIGRTGRFGKTGIAIN LIDSEDSMNMINILENHFQMKIARMDPSNIEELEAIEMA" gene <299089..>299652 /locus_tag="CAEBREN_32022" /db_xref="WormBase:WBGene00193987" mRNA join(<299089..299198,299243..299324,299367..299501, 299548..>299652) /locus_tag="CAEBREN_32022" /product="hypothetical protein" /db_xref="WormBase:CBN32022" /db_xref="WormBase:WBGene00193987" CDS join(299089..299198,299243..299324,299367..299501, 299548..299652) /locus_tag="CAEBREN_32022" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35030.1" /db_xref="WormBase:CBN32022" /db_xref="WormBase:WBGene00193987" /translation="MITSINTGMALNRTKTPHDPKKEVRDRTTEIIYLSTKLNQAKET CVNLDKERQKLREVGRRIKEKDIDPVWIFNGSCFLQTSQANSLKIIEKDMKTVEDVRE QVDKVIKQDTDTFLTLHKQRNLGDRGFDLRPLLKNGKLTSE" gene <299805..>304441 /gene="Cbn-rha-1" /locus_tag="CAEBREN_01631" /db_xref="WormBase:WBGene00140356" mRNA join(<299805..299975,300018..300460,300507..300553, 300604..300740,300790..301050,301100..301588, 301631..301805,301848..302358,302408..303082, 303127..303534,303581..303797,303853..303928, 303981..304046,304167..>304441) /gene="Cbn-rha-1" /locus_tag="CAEBREN_01631" /product="CBN-RHA-1 protein" /db_xref="WormBase:WBGene00140356" CDS join(299805..299975,300018..300460,300507..300553, 300604..300740,300790..301050,301100..301588, 301631..301805,301848..302358,302408..303082, 303127..303534,303581..303797,303853..303928, 303981..304046,304167..304441) /gene="Cbn-rha-1" /locus_tag="CAEBREN_01631" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR007502 (Helicase-associated domain), IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR011709 (Domain of unknown function DUF1605), IPR001159 (Double-stranded RNA-binding), IPR014720 (Double-stranded RNA-binding-like), IPR002464 (DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal)" /codon_start=1 /product="CBN-RHA-1 protein" /protein_id="EGT35016.1" /db_xref="InterPro:IPR001159" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR002464" /db_xref="InterPro:IPR007502" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR011709" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014720" /db_xref="WormBase:CBN01631" /db_xref="WormBase:WBGene00140356" /translation="MSRDIKEFLYAWLGRNKHGNPNYDTRGETRGAKQRFKCELRVPN FPYTAFGNSTNKKDAATNAALDFCQYLVREGAMQQNELPTFTSSSLEVASTWQDTNSS EPATMFVGAEDGSTYQQQQPPQPVKQIRYPWSNAYERDEVTHEQYVTQKADEIAASET VDHKSNFHGGWTMENSKKALNEYLQKMRLPQVSYVTKLKESNAVRTMETSAEIFVPQL NKKIIGKGSGSNKKVSEAGCAMNVVRQMFHLNIMQAYSGPTKKTKVSTLPDIDINLPE ELSTRVINYVKSCGIDLPTINESLSSTEAPSSLLTDVKLAQFPNSEASTASNISWAPP LQNWNPWRASNIDEPPLAFMSMDEISHRIIEKEEAKQGPQIEKSKAQRNELPVSQYRD QIVQTVANNRVTLIKGETGCGKSTQVAQFLLESFIGNSKAAHFNAVVSQPRRISAISL AERVANERGEEVGETCGYNVRFDSATPRPYGSIMFCTVGVLLRMMENGLRGISHVIID EIHERDVDTDFVLIVLRDMINQYKDLRVVLMSATIDTDLFTNFFGSMPDVGPTPVIVM HGRTFPVQAFFLEQILQNLRYMPEEVEQKKKKKGAPPPEEDDGDEEVDDKGRNMNILS DPSINESLRTAMSRISEKDIPYGVIEAVLTDIADRGVEGAVLIFLPGWAEIMTLCNRL LEHSEFGQASKYEVLPLHSQLTSQDQRKVFNHYPGKRKIIISTNIAETSITIDDVVYV IDSCKAKERMYTSNNNMVHFATVWASKTNVTQRRGRAGRVRAGYAFHLCSSTRYEALE EHGTAEMLRIPLHQIALTIKLLRLGSVGDFLGKALEPPPYDMVVESEAVLQAMGALDR NLELTSLGQMLARMPIEPVIAKVLILGTALGSGSVMCDVAAAMSFPTPFVPREKHHSR LNGIQRKFSGNKFSDHVALVAVYQGFREAVQMGASAAEREFCDRNSVSNPILKMTDGA RRQLIDVLRNQCSFPEAILYDIGVSVNAPDRELNLMRSLLIMALYPNVAYYTGKRKVL TIEQSSALINKYSVLVPMNNKQEVELPSPLLVFTEKVRTRCISCKGMSVITAIQLLVF GSRKIECIGEGLVRVDDMITIRMDVKTAAALVSLRPCMEALLVRSCENPESLATMNQP DAELRQLLRDISSEDYMSEAGPIKDSLLTDHALVQKPSVPQNRPNNAYSDWASGSSNN SSFQASDSSFLSQGSPNNYAPARGGRMYSSRGNRRGNTYHPYARPFPPPNAGMGYQQF NNSGYGAGGDWNNSPSMRGGYGGGYGRPGGGEGYQGGRGGRGRGGNRGWNASQW" gene <307155..>310400 /locus_tag="CAEBREN_18595" /db_xref="WormBase:WBGene00157320" mRNA join(<307155..307195,307257..307284,307786..307876, 307931..308055,309075..309411,309465..309553, 309602..309678,309725..309840,309890..310074, 310299..>310400) /locus_tag="CAEBREN_18595" /product="hypothetical protein" /db_xref="WormBase:CBN18595" /db_xref="WormBase:WBGene00157320" CDS join(307155..307195,307257..307284,307786..307876, 307931..308055,309075..309411,309465..309553, 309602..309678,309725..309840,309890..310074, 310299..310400) /locus_tag="CAEBREN_18595" /note="contains similarity to Pfam domain PF00149; contains similarity to Interpro domain IPR004843 (Metallo-dependent phosphatase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35034.1" /db_xref="InterPro:IPR004843" /db_xref="PFAM:PF00149" /db_xref="WormBase:CBN18595" /db_xref="WormBase:WBGene00157320" /translation="MLSPALLKVSLNRRSSAPVPQDEKMMFPSRSRTASYLQPMMEDQ ELIGFNRDRRRSSGSIIVDSFELGNASPSRRASIASALPLDKKSKRKISNLVPLHQYT EDPTLAWEMLKEKRPVKPVRQMRLDTPVKPDHVRFVCIGCTHGEQMDLSKLPPGDVLL VAGDFTSCGLPNEVHNFNKLLGKLKYAYKVVIGGNHECTFDDTFLKLNKESEPKEMAL KQALLSAIHSDSKGGISAKDLLSNAIYLEDSVIELFGITIYGTPWQPKVDNWAFNLSR GQSLLDKWNMIPTGVDVLLTHTPPLGHGDMMNNGQRMGCVELLNTVFKRVRPKYHVFG HIHEGYGCTTDGYTKFINCCLCNENLDMKNEPVIFDIPVHPHTKQFYVQNVKKILKRF QKKK" assembly_gap 310802..313398 /estimated_length=2597 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <313488..>313733 /locus_tag="CAEBREN_28187" /db_xref="WormBase:WBGene00190152" mRNA <313488..>313733 /locus_tag="CAEBREN_28187" /product="hypothetical protein" /db_xref="WormBase:CBN28187" /db_xref="WormBase:WBGene00190152" CDS 313488..313733 /locus_tag="CAEBREN_28187" /note="contains similarity to Interpro domain IPR000276 (7TM GPCR, rhodopsin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35027.1" /db_xref="InterPro:IPR000276" /db_xref="WormBase:CBN28187" /db_xref="WormBase:WBGene00190152" /translation="MRTPTNFFLGNLAVADLLVAVFCILQNMIHIVGFDHGDWPLGKS LCKIYLGLTNMMPCTSAGILVLVSIEKYIAVLHPLSG" gene <314065..>314927 /locus_tag="CAEBREN_23948" /db_xref="WormBase:WBGene00162673" mRNA join(<314065..314352,314600..314757,314807..>314927) /locus_tag="CAEBREN_23948" /product="hypothetical protein" /db_xref="WormBase:CBN23948" /db_xref="WormBase:WBGene00162673" CDS join(314065..314352,314600..314757,314807..314927) /locus_tag="CAEBREN_23948" /note="contains similarity to Pfam domain PF00001; contains similarity to Interpro domain IPR000276 (7TM GPCR, rhodopsin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35041.1" /db_xref="InterPro:IPR000276" /db_xref="PFAM:PF00001" /db_xref="WormBase:CBN23948" /db_xref="WormBase:WBGene00162673" /translation="MIFHDYKLSDSKGSLEAANGYANATVPGASWQMKNGRIVIYKQE SLLNVPIREKKPKEPKRPKDSEGRRKVVRLLVAVVVCFAVLTFPHHARILFTNFRTGV ICNSHWTRIAQPLSYILLFISSAINPILYACLSKRFRNALSDVLHCRKGLFSKIPRSR NRTLVSDVPPDDTPCPSPVPAIRMQRLR" gene <320366..>323199 /locus_tag="CAEBREN_10469" /db_xref="WormBase:WBGene00149194" mRNA join(<320366..320512,320719..320842,320912..321583, 321763..322082,322129..322384,322430..322674, 322933..>323199) /locus_tag="CAEBREN_10469" /product="hypothetical protein" /db_xref="WormBase:CBN10469" /db_xref="WormBase:WBGene00149194" CDS join(320366..320512,320719..320842,320912..321583, 321763..322082,322129..322384,322430..322674, 322933..323199) /locus_tag="CAEBREN_10469" /note="contains similarity to Pfam domain PF01757; contains similarity to Interpro domain IPR002656 (Acyltransferase 3)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35011.1" /db_xref="InterPro:IPR002656" /db_xref="PFAM:PF01757" /db_xref="WormBase:CBN10469" /db_xref="WormBase:WBGene00149194" /translation="MLLGIYLLLLSPVLVSAGLEEYDEPFILQFINRSQTLDLSSKCK QSLALVYDYLNDIETLTDQKICYFESFATGPNDLFLSRDQDRWVYKGYECLLSAGETV YSKSEHPMHYCYTHDDDKDKRVPAFSVCIPSPCADENQKLLEEWRRITHPEATEPITF TACTRSRHEKQWFELPIPIADFGFNMALAMLVVMATIFHNMRGEDAKTWSARILLAFS AKTNFKKLIALPKDPQSCITCLLGLRFGSMVWTLIGHSFIFVQAYMENVEDFKESMVN NFFNQWITNFTLSVDVFLTLGGTVLSYSWFRKWLKNTSEEEPTWSSWGYWLRFYRHRV VRLYPAYLYTLLAVTLRISVTHFHPMWPPTDPAIQCPKYWWQNVLFVNSILDNQCMPW TWYIGTEFIYYLISPIFLVLLRKTPKFGFFVCFGVIMLSAGLNVESIVRNNFPPTQFL WKQPEIFNPNFIQHHLELYIKPQYRIGPYLIGILLGYQLARYQRIPVKPQQSNRYIIT MWSVAFFGIFFGLYGLYPALQGWDSIAWRAYHLLYGALHRDIFSIGIAFLIYICHTGI GGPINVFLSSNFFLPLANLSFSAYLFHMIPVVLTYMLVPFPIYFNTQIPLFIHCFVQL LITYVFAIICTMVSELPALNIERLLLSTPPKTTLKPIPPTDSELQLKTSEKA" gene complement(<323711..>325263) /locus_tag="CAEBREN_15246" /db_xref="WormBase:WBGene00153971" mRNA complement(join(<323711..323848,323994..324252, 324299..324394,324455..324582,324630..324937, 324986..325064,325111..>325263)) /locus_tag="CAEBREN_15246" /product="hypothetical protein" /db_xref="WormBase:CBN15246" /db_xref="WormBase:WBGene00153971" CDS complement(join(323711..323848,323994..324252, 324299..324394,324455..324582,324630..324937, 324986..325064,325111..325263)) /locus_tag="CAEBREN_15246" /note="contains similarity to Pfam domain PF00266; contains similarity to Interpro domains IPR020578 (Aminotransferase class-V pyridoxal-phosphate binding site), IPR015422 (Pyridoxal phosphate-dependent transferase, major region, subdomain 2), IPR000192 (Aminotransferase, class V/Cysteine desulfurase), IPR015421 (Pyridoxal phosphate-dependent transferase, major region, subdomain 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35014.1" /db_xref="InterPro:IPR000192" /db_xref="InterPro:IPR015421" /db_xref="InterPro:IPR015422" /db_xref="InterPro:IPR020578" /db_xref="PFAM:PF00266" /db_xref="WormBase:CBN15246" /db_xref="WormBase:WBGene00153971" /translation="MSSRAPPKALLQDMVVPPRQLFGPGPSNMADSIAETQSKNLLGH LHPEFVQIMGDVRLGLQYIFKTDNNYTFAVSGTGHSGMECAMVNLLEPGDRFLVVEIG LWGQRAADLANRMGIEVKKISAPHGKAVPVEDIRKAISEYKPNLVFVCQGDSSTGVAQ PLETIGDACREHGALFLVDTVASLGGTPFAADDLKVDCVYSATQKVLNAPPGLAPISF SDRAIEKIRNRKQRVASFYFDALELGNYWGCDGELKRYHHTAPISTVYALRAALSAIA KEGIDESIQRHKDNAQVLYSALKKNGLEPFVEDEKLRLPCLTTVKVPEGVDWKDVAGK MLTNGTEIAGGLGATVGKIWRIGTFGINSNKAKIENVVELLSNSIKETRSKI" gene complement(330537..330609) /locus_tag="CAEBREN_27170" /pseudo /db_xref="WormBase:WBGene00187781" tRNA complement(330537..330609) /locus_tag="CAEBREN_27170" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN27170" /db_xref="WormBase:WBGene00187781" gene <332716..>336149 /locus_tag="CAEBREN_28929" /db_xref="WormBase:WBGene00190894" mRNA join(<332716..332790,335079..335624,335883..>336149) /locus_tag="CAEBREN_28929" /product="hypothetical protein" /db_xref="WormBase:CBN28929" /db_xref="WormBase:WBGene00190894" CDS join(332716..332790,335079..335624,335883..336149) /locus_tag="CAEBREN_28929" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35023.1" /db_xref="WormBase:CBN28929" /db_xref="WormBase:WBGene00190894" /translation="MLSSKFSGLIIAVEELNHGEKREVFIACFVVIMFSAGLNVESIV RNNFPPTQFLWKQPEVFNPNFIQHHLELYIKPQYRIGPYLIGILLGYQLARYQRIPVK PQQSNRYISKSVLSQIILNFNNSVTMWSVAFFGIFFGLYGLYPALQGWDSIAWRAYHL LYGALHRDIFSIGIAFLIYICHTGIGGPINVFLSSNFFLPLANLSFSAYLFHMIPVVL TYMLVPFPIYFNTQIPLFIHCFVQLLITYVFAIICTMVSELPALNIERLLLSTPPKTT LKPIPPTDSELQLKTSEKA" assembly_gap 333264..333273 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 334040..334938 /estimated_length=899 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<336665..>338210) /locus_tag="CAEBREN_25384" /db_xref="WormBase:WBGene00164109" mRNA complement(join(<336665..336802,336941..337199, 337246..337341,337402..337529,337577..337884, 337933..338011,338058..>338210)) /locus_tag="CAEBREN_25384" /product="hypothetical protein" /db_xref="WormBase:CBN25384" /db_xref="WormBase:WBGene00164109" CDS complement(join(336665..336802,336941..337199, 337246..337341,337402..337529,337577..337884, 337933..338011,338058..338210)) /locus_tag="CAEBREN_25384" /note="contains similarity to Pfam domain PF00266; contains similarity to Interpro domains IPR020578 (Aminotransferase class-V pyridoxal-phosphate binding site), IPR015422 (Pyridoxal phosphate-dependent transferase, major region, subdomain 2), IPR000192 (Aminotransferase, class V/Cysteine desulfurase), IPR015421 (Pyridoxal phosphate-dependent transferase, major region, subdomain 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35080.1" /db_xref="InterPro:IPR000192" /db_xref="InterPro:IPR015421" /db_xref="InterPro:IPR015422" /db_xref="InterPro:IPR020578" /db_xref="PFAM:PF00266" /db_xref="WormBase:CBN25384" /db_xref="WormBase:WBGene00164109" /translation="MSSRAPPKALLQDMVVPPRQLFGPGPSNMADSIAETQSKSLLGH LHPEFVQIMGDVRLGLQYIFKTDNNYTFAVSGTGHSGMECAMVNLLEPGDRFLVVEIG LWGQRAADLANRMGIEVKKISAPHGKAVPVEDIRKAIAEYKPNLVFVCQGDSSTGVAQ PLETIGDACREHGALFLVDTVASLGGTPFAADDLKVDCVYSATQKVLNAPPGLAPISF SDRAIEKIRNRKQRVASFYFDALELGNYWGCDGELKRYHHTAPISTVYALRAALSAIA KEGIDESIQRHKDNAQVLYSALKKNGLEPFVEDEKLRLPCLTTVKVPEGVDWKDVAGK MLTNGTEIAGGLGATVGKIWRIGTFGINSNKTKIENVVELLSNSIKETRSKI" assembly_gap 345684..346332 /estimated_length=649 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 347135..347623 /estimated_length=489 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 350363..351362 /estimated_length=1000 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <354012..>354940 /locus_tag="CAEBREN_03606" /db_xref="WormBase:WBGene00142331" mRNA join(<354012..354027,354074..354265,354450..354529, 354575..354780,354829..>354940) /locus_tag="CAEBREN_03606" /product="hypothetical protein" /db_xref="WormBase:CBN03606" /db_xref="WormBase:WBGene00142331" CDS join(354012..354027,354074..354265,354450..354529, 354575..354780,354829..354940) /locus_tag="CAEBREN_03606" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35025.1" /db_xref="WormBase:CBN03606" /db_xref="WormBase:WBGene00142331" /translation="MSRKNGFSVVSVFILCSMAQVTCEEFELENTEQLVECVQCVQLW RSASAKEGKVCTSGASTCRGNACFMRQCKHCPVYQYMSGCVNFSPWQLADLEMNRRTS ELRMRRVGAVLLCEDTFNQTTCVCNRRDKCNSIHSRLPFATYSEGLFKGVVNFDTIIA AIDPRYLEVMSGYHFRFLASSSSFSSFSFSIAITTLFLLSH" gene complement(<355077..>357806) /locus_tag="CAEBREN_21844" /db_xref="WormBase:WBGene00160569" mRNA complement(join(<355077..355191,355681..355934, 355978..356221,356270..356367,356412..356516, 356562..356665,357086..357175,357223..357304, 357421..357483,357804..>357806)) /locus_tag="CAEBREN_21844" /product="hypothetical protein" /db_xref="WormBase:CBN21844" /db_xref="WormBase:WBGene00160569" CDS complement(join(355077..355191,355681..355934, 355978..356221,356270..356367,356412..356516, 356562..356665,357086..357175,357223..357304, 357421..357483,357804..357806)) /locus_tag="CAEBREN_21844" /note="contains similarity to Pfam domain PF01400; contains similarity to Interpro domains IPR001506 (Peptidase M12A, astacin), IPR006026 (Peptidase, metallopeptidase), IPR013032 (EGF-like region, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35018.1" /db_xref="InterPro:IPR001506" /db_xref="InterPro:IPR006026" /db_xref="InterPro:IPR013032" /db_xref="PFAM:PF01400" /db_xref="WormBase:CBN21844" /db_xref="WormBase:WBGene00160569" /translation="MAVSECAIPYYRTHSNFGSLGRRKVRQVQRDLSYRWPNNTVPYF VGNVTNSIKKSVRMAIEELHAWTCVRFQNINQRNTNGDSVRIVDLGSCSSPIGRQQIG IQDVSLTKNCWGMGTAIHELMHAIGIEHTQSRSDRNQYLDILAQNIDQRDLPNFELLS PRLWANLVPYDYGSVMHYSADSFSNTDDEQTMLPKDRSFIETMGSMIPNFYDFDQINQ YYQCYDSCRNGGYVANCLNGGIPNPNNCAVCNCPMGYGGDLCDQRPEGCGSTIVATDR WQKQKLTVRFNRNDDQYFTFCNSWIVAPTNRTIQVIYEITSDSVRRQICSFGCYEGGI EVKHLEDPRITNDRDCCLNTPLNLTTTVNPLPVILYTSGATVIYDFSYRYL" gene <361907..>362294 /locus_tag="CAEBREN_05286" /db_xref="WormBase:WBGene00144011" mRNA join(<361907..362099,362149..>362294) /locus_tag="CAEBREN_05286" /product="hypothetical protein" /db_xref="WormBase:CBN05286" /db_xref="WormBase:WBGene00144011" CDS join(361907..362099,362149..362294) /locus_tag="CAEBREN_05286" /note="contains similarity to Interpro domain IPR013032 (EGF-like region, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35049.1" /db_xref="InterPro:IPR013032" /db_xref="WormBase:CBN05286" /db_xref="WormBase:WBGene00144011" /translation="MSSLRQPATLSMCPAECNHRGSCWYSQAIYFCRCVGDYFGEFCE LLSTSTSLSVNSDETGFDASSILLFVTVGIAVCAALVYVLSWKQDDVAAFWKTVCKRC ADLKDRWMGQ" gene <364552..>365302 /locus_tag="CAEBREN_04114" /db_xref="WormBase:WBGene00142839" mRNA join(<364552..364600,364651..364928,365264..>365302) /locus_tag="CAEBREN_04114" /product="hypothetical protein" /db_xref="WormBase:CBN04114" /db_xref="WormBase:WBGene00142839" CDS join(364552..364600,364651..364928,365264..365302) /locus_tag="CAEBREN_04114" /note="contains similarity to Interpro domain IPR020376 (Uncharacterised protein family F46C5.1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35046.1" /db_xref="InterPro:IPR020376" /db_xref="WormBase:CBN04114" /db_xref="WormBase:WBGene00142839" /translation="MHSQTFIITSIFLVVIFAFCSAAPMIEEPKLEKPTNLEILFAKI VKKQNESKQHRLINFISRAMPGGVDAPVAMMAEYETFKSDKSANFLNDGAGHVVFRQY RRARLSDILHNVNRRAGGV" gene <366650..>367103 /locus_tag="CAEBREN_01487" /db_xref="WormBase:WBGene00140212" mRNA join(<366650..366692,366740..367005,367059..>367103) /locus_tag="CAEBREN_01487" /product="hypothetical protein" /db_xref="WormBase:CBN01487" /db_xref="WormBase:WBGene00140212" CDS join(366650..366692,366740..367005,367059..367103) /locus_tag="CAEBREN_01487" /note="contains similarity to Interpro domain IPR020376 (Uncharacterised protein family F46C5.1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35047.1" /db_xref="InterPro:IPR020376" /db_xref="WormBase:CBN01487" /db_xref="WormBase:WBGene00140212" /translation="MLRFAVIAVLISIPFILAAPEIDSSDSGSGLDVLYKKLMKKQET VKNSRLIDFISRGAPSGVDAPIPSIAEYETFKSDKSVNFLSDGAGHIVFRQFRRIRIS DLLGSQMKNRPGVRL" gene complement(<372044..>372974) /locus_tag="CAEBREN_32045" /db_xref="WormBase:WBGene00194010" mRNA complement(join(<372044..372133,372182..372317, 372367..372452,372497..372592,372761..372865, 372912..>372974)) /locus_tag="CAEBREN_32045" /product="hypothetical protein" /db_xref="WormBase:CBN32045" /db_xref="WormBase:WBGene00194010" CDS complement(join(372044..372133,372182..372317, 372367..372452,372497..372592,372761..372865, 372912..372974)) /locus_tag="CAEBREN_32045" /note="contains similarity to Pfam domain PF03248; contains similarity to Interpro domain IPR004932 (Retrieval of early ER protein Rer1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35021.1" /db_xref="InterPro:IPR004932" /db_xref="PFAM:PF03248" /db_xref="WormBase:CBN32045" /db_xref="WormBase:WBGene00194010" /translation="MDDGLRDRPGVTSRFFHSLEVKYQYYLDRLTPHTAIRWVIALIS LVFFASRIVLLQGFYIVAYAVGIYYLNLFLLFLTPSIDPALEFEDEDDGPVLPSKTND EFRPFMRRLPEFKFWHSFMKATLIAITCTFFEFFDVPVFWPILVMYFFILTFLTLKRQ IMHMIKYRYIPFTVGKPRMQGKEDTGKVVVG" gene <373612..>375473 /locus_tag="CAEBREN_16672" /db_xref="WormBase:WBGene00155397" mRNA join(<373612..373736,373855..373945,373992..374258, 374308..374434,374479..374708,374752..374891, 375051..375193,375241..>375473) /locus_tag="CAEBREN_16672" /product="hypothetical protein" /db_xref="WormBase:CBN16672" /db_xref="WormBase:WBGene00155397" CDS join(373612..373736,373855..373945,373992..374258, 374308..374434,374479..374708,374752..374891, 375051..375193,375241..375473) /locus_tag="CAEBREN_16672" /note="contains similarity to Pfam domain PF00400; contains similarity to Interpro domains IPR019781 (WD40 repeat, subgroup), IPR001680 (WD40 repeat), IPR011042 (Six-bladed beta-propeller, TolB-like), IPR015943 (WD40/YVTN repeat-like-containing domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35036.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR011042" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR019781" /db_xref="PFAM:PF00400" /db_xref="WormBase:CBN16672" /db_xref="WormBase:WBGene00155397" /translation="MIDIDSVSLPVLITGFVGFVTVMGVAIIYVAKKEREGEQEEIDV VMDEVTETVISEEPNKKSKHQRKNDQWKTKEPAFSHKWSVGVLKGHTKEVTDIAFASD GKKFVSISGDRTVTLWDVRDFAQKEHKSVRQTIEYDTPTHVVFAPDCKSVVFSVKRDN KLCVYKLAKKTEGSGSHHFVHIDNLEFERVHQVDIQHIGIAGNAKYLMSAALDNKVCI YDLRGQLLKTIDPKVGTLYDCRLSPDGRFIIVSGFTPDVFVFEPVFSRDGTFQNVKKV FSLSGHQSGVLAAAFNGSSTRAVTISRDGRWRIFDVDIRYEAGQDARILREGCWEPLR GATSEKVRLEMSPSGDSFAVSFETNLKVFSSEDETKDYTELKDICSTTISSIAYSPEG TLISTCGDKYVRVIHNVPEYHSQVVKFTHQMSEATVESSRRRLKERIDEAQQYLLKFD C" gene <377333..>379104 /locus_tag="CAEBREN_18498" /db_xref="WormBase:WBGene00157223" mRNA join(<377333..377434,377482..377586,377758..378045, 378089..378392,378437..378615,378682..378822, 378874..>379104) /locus_tag="CAEBREN_18498" /product="hypothetical protein" /db_xref="WormBase:CBN18498" /db_xref="WormBase:WBGene00157223" CDS join(377333..377434,377482..377586,377758..378045, 378089..378392,378437..378615,378682..378822, 378874..379104) /locus_tag="CAEBREN_18498" /note="contains similarity to Pfam domain PF00328; contains similarity to Interpro domain IPR000560 (Histidine phosphatase superfamily, clade-2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35020.1" /db_xref="InterPro:IPR000560" /db_xref="PFAM:PF00328" /db_xref="WormBase:CBN18498" /db_xref="WormBase:WBGene00157223" /translation="MFRVLFFTIAWSWAYGANIPPVRDGVMELKMVHIVWRHGDRSPT TTFKADPFQEDAWTFGGGGWGQLSPMGMYQHLALGKKLRNRYVYTVNSTYNFLPSVYD QKTMYVRSTGINRTLVSATSNMLGMYGQDDYGSTAGTDYPDAKGWPRGFVPIPIHTVD YDSDHIGNMDSNCPRREWLWNLAQQSDEVKNWRNSAAVSSVIDKLTSLVNETWSLEDF WIVPDALFIEQIYYNETLRKKNLWFTDDFYNQIVAVNDQIYMYEYGIFNKTVTMQNMN IGLELLKVRSGPLMNDMVDRINRKSDCTYGGSKADDCNWINGLKYFVYSAHDETVYAV LVALGIERFAIIPHGYPLYSAAVSVEYWRNTTDNNDYFKLVYHKQSGDDFSVMTSEIE GCGGDYCSMDVLIQVAKRLKTDQPIDQWCLVTESSSTHSISISFVFILAAIINYFSL" gene complement(<379230..>384240) /locus_tag="CAEBREN_13074" /db_xref="WormBase:WBGene00151799" mRNA complement(join(<379230..379517,379567..379692, 379735..380031,380106..381326,381373..381555, 381605..381778,381824..381970,382760..382915, 383090..383224,384229..>384240)) /locus_tag="CAEBREN_13074" /product="hypothetical protein" /db_xref="WormBase:CBN13074" /db_xref="WormBase:WBGene00151799" CDS complement(join(379230..379517,379567..379692, 379735..380031,380106..381326,381373..381555, 381605..381778,381824..381970,382760..382915, 383090..383224,384229..384240)) /locus_tag="CAEBREN_13074" /note="contains similarity to Pfam domain PF02363; contains similarity to Interpro domains IPR003341 (Cysteine rich repeat, tripleX), IPR013032 (EGF-like region, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35068.1" /db_xref="InterPro:IPR003341" /db_xref="InterPro:IPR013032" /db_xref="PFAM:PF02363" /db_xref="WormBase:CBN13074" /db_xref="WormBase:WBGene00151799" /translation="MSDVSALVEIRRRFTFSAHNTIREHLAPFYIQCQESQRPESSPS SRHLCTVANDGGKRKEHLPRVCSTDKRNSPFYEINDMKTNLILFLLVLGAYFVQSQQS VISRAKRQCPCAQLSQKSKCNCYPIGGGMQRCKCSNEPQSSSCSCANKAQTSVCQPQC QKSCVDSCVRNSHQPQLLCDKTCQFTCNKACSPTSTSSSSSSSFPPIKVVVNQQTKAS QCPQACAQSCSNSCTSQPNKSTCINMCLKSCEPTCIQAAVSINVKEFMRTSTTTTAPV NSCVSACQPTCDAQCIDVIKRYEVIIQKLPVVQQCPSQCQPTCSPQCIQSVTVSIQAQ TTVQPTTVSCIPACQPACTPQCVQAVTTTTETCIPACQPSCQPQCVERQLQIQIVTAQ TTRAPETCIPACQPACQPQCVYQYLSSGVSTVPPITKVCISVCQPACDPGCLAIYTTT PTTPAPLQCISQCQPACLPSCTETFTTTISMPKQCVPECQPACETKCIVAQIVLKIKN NYQQQIQPSYSPPASCVPQCQPACTQECVAAQPNFSVQIKMIDDLTTTTSTPSPQCIP QCQPSCEQRCIQTYKIQIQQMNAQQNQQRQYNCVPACQPACEQSCIQSQYQVTVQQSY SKVNQGNSCPSACQPACEPLCVQQITVQTTVPITKSCVPQCQPACSQECVQQATFSIS IPMTTPAPSCSPQCQPACDPQCISFTLKLPAVTTPPPTCQPQCQPACQPSCVETYTFT LPMSDHGSKQCAPACQPSCDSKCIQNYQFEIVIPQADNNCMPACTQSCQTSCVQQNSQ SVPQCSTACTDSCRSSCVEIVKESAEPTFKLEIVLQKPMEETVQCAPQCASQCVEQCK TQLLTQIEFCVPACQNACQQNCPLQVEPCAMSGSQCNCSTGFSICGSNQCCRKRRR" gene complement(<387373..>388438) /locus_tag="CAEBREN_18980" /db_xref="WormBase:WBGene00157705" mRNA complement(join(<387373..387723,388355..>388438)) /locus_tag="CAEBREN_18980" /product="hypothetical protein" /db_xref="WormBase:CBN18980" /db_xref="WormBase:WBGene00157705" CDS complement(join(387373..387723,388355..388438)) /locus_tag="CAEBREN_18980" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35055.1" /db_xref="WormBase:CBN18980" /db_xref="WormBase:WBGene00157705" /translation="MRTLEVFDLFENEKKHNYLNGIEADKSTIWYKENELILFLFYCF VIGTSLSFFKKVGNGPKNQRDILNPTKDFIPKLLGPAIQEGDSLVTYFSMISQIHIFS FLGSKESCTRLSNNVSIQSVFLEIERALATFFSEFLPVGSIL" gene <389229..>390056 /locus_tag="CAEBREN_12295" /db_xref="WormBase:WBGene00151020" mRNA join(<389229..389400,389450..389544,389599..389649, 389698..389793,389895..>390056) /locus_tag="CAEBREN_12295" /product="hypothetical protein" /db_xref="WormBase:CBN12295" /db_xref="WormBase:WBGene00151020" CDS join(389229..389400,389450..389544,389599..389649, 389698..389793,389895..390056) /locus_tag="CAEBREN_12295" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35066.1" /db_xref="WormBase:CBN12295" /db_xref="WormBase:WBGene00151020" /translation="MVRQLPILFFLLHIGYSHADLMRTVYCANKCNDYLRVPEANIPK CEERHLKLNQCGTVISCSWADVELEKQRPVANATDEIVCCYNVVLKEKGDCDAQQTLT STNKHNHRQSHTTDCFSQSPALFSVIAILLILLAGQTFYIMWTCAFHRRMYHQKVCQL DESTVTHSQGPLYSSKPICESRLLSFEHLPN" gene <390660..>390897 /locus_tag="CAEBREN_24086" /db_xref="WormBase:WBGene00162811" mRNA join(<390660..390798,390842..>390897) /locus_tag="CAEBREN_24086" /product="hypothetical protein" /db_xref="WormBase:CBN24086" /db_xref="WormBase:WBGene00162811" CDS join(390660..390798,390842..390897) /locus_tag="CAEBREN_24086" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35084.1" /db_xref="WormBase:CBN24086" /db_xref="WormBase:WBGene00162811" /translation="MGCGGGYGGFFGGSYGLGYGGYGGYGGYGMGGYGLGYGGYGMFG GYGGGCGYSMMGGCFGKKKK" gene complement(<394627..>394794) /locus_tag="CAEBREN_29718" /db_xref="WormBase:WBGene00191683" mRNA complement(join(<394627..394721,394770..>394794)) /locus_tag="CAEBREN_29718" /product="hypothetical protein" /db_xref="WormBase:CBN29718" /db_xref="WormBase:WBGene00191683" CDS complement(join(394627..394721,394770..394794)) /locus_tag="CAEBREN_29718" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35031.1" /db_xref="WormBase:CBN29718" /db_xref="WormBase:WBGene00191683" /translation="MASQFANQHMNTAKQCRNHGYSTEALQQEEALSTLESTD" gene <399335..>400662 /locus_tag="CAEBREN_21328" /db_xref="WormBase:WBGene00160053" mRNA join(<399335..399552,399651..399873,399967..400177, 400259..400449,400498..>400662) /locus_tag="CAEBREN_21328" /product="hypothetical protein" /db_xref="WormBase:CBN21328" /db_xref="WormBase:WBGene00160053" CDS join(399335..399552,399651..399873,399967..400177, 400259..400449,400498..400662) /locus_tag="CAEBREN_21328" /note="contains similarity to Pfam domain PF04790; contains similarity to Interpro domain IPR006875 (Sarcoglycan complex subunit protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35083.1" /db_xref="InterPro:IPR006875" /db_xref="PFAM:PF04790" /db_xref="WormBase:CBN21328" /db_xref="WormBase:WBGene00160053" /translation="MRGYPVYAMGPPDEPVWSRNEQSLSRGVSHQTMAQPITSTYPTS YSAHSQAYPSQTTVIHSTTKPVADADIYRVGIYGWRKRFLYTFILILAIGIVLNLSLT FWIMSVLDFSPNGIGTLKIEDDGIRVEGRAQFDRPVHFSKLSTLDEETLTVDSFRGVN LQARKPNGDVASKFSLMPEGKAQVTCERFEVFDEDQKLLFFADSDEIGLKLENLRILD DGGSVFEGAIQTSSVRPQPDSPLRLESPTRSVSVDAAQDIEILAAAGEVSVNSLLDIS ISSKQGEIRLESSSIYMEKLARSDGRGSPQTQVCVCHNGRLFLAAPNADCRADRDICA N" gene complement(<401155..>413003) /locus_tag="CAEBREN_23274" /db_xref="WormBase:WBGene00161999" mRNA complement(join(<401155..401397,401454..401804, 401855..402665,402751..403333,403378..404748, 404796..405059,405111..405657,405717..406730, 406924..407487,407536..407712,407794..408184, 408235..408411,408457..408709,408835..409455, 409504..409761,410015..410721,410767..411061, 411106..411265,411322..411534,411635..411750, 412976..>413003)) /locus_tag="CAEBREN_23274" /product="hypothetical protein" /db_xref="WormBase:CBN23274" /db_xref="WormBase:WBGene00161999" CDS complement(join(401155..401397,401454..401804, 401855..402665,402751..403333,403378..404748, 404796..405059,405111..405657,405717..406730, 406924..407487,407536..407712,407794..408184, 408235..408411,408457..408709,408835..409455, 409504..409761,410015..410721,410767..411061, 411106..411265,411322..411534,411635..411750, 412976..413003)) /locus_tag="CAEBREN_23274" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR021643 (Mediator complex subunit Med13, N-terminal, metazoa/fungi), IPR009401 (Mediator complex, subunit Med13)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35064.1" /db_xref="InterPro:IPR009401" /db_xref="InterPro:IPR021643" /db_xref="WormBase:CBN23274" /db_xref="WormBase:WBGene00161999" /translation="MRKDIFRRNENFTKVSSQQNQPLYGEASKIPAGSGPARDSAEDM PSSKEGDKDASRKQKIVKRPEFNNGGSLEDCVSNVYALLDLPGIKWKCFRPKPNAPRG LPLASDLILKAYSKCVLNEILATWRRKPLPPTDNTDMLPAPYFSNDSAKELWVFWFDE EPEELAKHCEGLESDEELSSANQMNIVSYEVRTILFKALHIVLERDLIKDGFVRFGRW FTVPLSARENYLHYLHSNHSPAIRFNFFVHGSHTVCASVQAQRQPTLIALAKRHIECK AVKRFPVVVGPWSMRGILVQDQLTILADPSMQENVEKEYNQWKEYIQIEEKEPEIIVE ERPKTPDPEPSVLHPTRVLLASSSDEEPTTSYETDQANPESVPQRPRWMYEQDAPSEK PRELTYEEKEKRNQAREVRRRRRKNREERRKEQERQRSEVKNPEEYDSDVVTDPEVEN KEEESVDSEIPKMVLVEIDNVRMLYPSKLICVTLDDDRQMLESMGLKTNPVPSELHVP GRRPRVKNVVNLSNPVLSTRAVVQYCENEIRQQREEMKRRCKKPITMRKRRAAVNDTF LTWKTKYQKSYHTPIREHNMLEAADDVYVMGDKLDRYGDLCQEHERVRYQEIALEGRT TLIERKDDFHAYHKKRMTKTLKERQKRRPLKKKVKSKGSKRRQQGNVAKLARIIKPSK KIIEKKAKPAKKVKIPGAVKPSANVKPSKSVKLSRRLKSIEKALILRNKRPLTWIERW KLSKKIRGIRIKRRSIYASKNKKIKLKGKKSFCGYFWVVLRRRKRKRYYGFPGFMIEI INRRIKRKRLRTKSAEQRRERNKKMGSLNADYKKIFEESDEALTSTVRPDNDDEPKSV DKFSIHDWSKCEAEMYTPGKIPDCEIEEIKPVYDMILPNPHHEEAVKPTPFYPIHFLS NNEANNEFEMMSGDEEMSEERFNEVFKDKLNRWKPNFTRGEKIENADYQFDPSNRPVG SPKEYHLKEIPKKSKFEPVLAIPPGNKYFKGSIIKNGLRGFEELCAEKDAQDAMKKAK YLKKTRRKVTKREIKTARACHLELKRQIVKRSLKKTLKKLRLIISKDTVVEESKKFKQ LTTIRINNVRMNKFLYEKELARQVLLLCDPSSIFRHVENGGPYGLCDVSGLISPDYSN TPHSFDDEHSDSEMDERYGLGEGTSDKYQDGDSVDMIEPETQVIDELPMEMNSMTDHI RTVGDHLGPDGMLSPPASNEMPKGGPLSVGPPSIESQGLNQIYPTPPSVQMLQGDASQ ALSPGMHIKMRYTVNTGEDDIERISIPGGGATIVEIKADDDETRNMKKWNNITKKSKL EIETVPSELVYKSMVTRKFDCAPHRAFAVLIQPKASDRRIPPPFALPQPSTSVHPSLS TPMAPVFQSPALPPQHIPSPFSVGPMGHPSMGPPAYPGTPGAFPPTTPTYSQMTPRPG SNFGPGPGYSYPHQMGAPGYPGQMGQMGQMGVQRQYSNPQMFQHHQHQMQQMQMRMQQ MRQMGQGVPPGYGAPGMPPYQPGTPGSGGYVTPVGGPSSVQRLNNFVNQSQFGPTNGP YGSMQPMIPQSPNFNQQYSGMGNPMGSPMVNPMMSPMQQHQFHQQQMMQQQQHHQQQQ QQQQIQLQQIQRNHMQLQNSLPPQIAQPPNPQLLLMQQNEQVYNAFHGLSERDKRKFS RRQMQLKSGLMPTSLQPAAIKNLPNPPDANVPYKKQDSSIRPPDLNVPRGDSLTVAIV LSDTLLDLHFDSVFDACPICSCSVSIRSRDLGMYINPHMVLSSRERGHTNMREYTIGN WSGFHVNAPTTCTCGFSAIRHRYLSWCSGLFEEDADEATTSEHAVAPVIPPLDYPKKS TARDMVWFDSKSVHDLALIDQIRKMSYSNSLGKAVAQMGTIKEHNRNIAISVEISSDI TVPSEYILSHVDTLELLMLGNSALGPMQKSGVGNQTPFSQFPQKFLNYFHPWGFQTAN EITELNSSEWDDLLGLITPTLEVSMKQARHISPEVEFKIEGPMTWKEIVMKANRGTPL TEDDDDPALAEPIPAIMRSMPNEAIRAAPNIEQYADQALLGPIDQPKDVMYITIIPDD DLIFEQAVNFMDTVTETYETMRLGRHIPFPVSTGTATRFREVMTSFQSQFPFPEQHQQ LVKAANAQLHNVSQNLAAEIDPLNKKPEYWSKKTKRKIAGQEELKQIETEDPEVNWKD KRQFKRGCRHPKLRFPEKHSTGFYDREGILRVGTPMAPVKSHQSIINTVEFENMTKHL TDSNGFVTRLRLYLQQLEDIVFNVLMDTKEAFERSGYRYQMAVEGRLKRQKHRKDIEE ERIRYSHAKREDEQGNPQPPDEIEIGVGTEIGEATPEPWVDDELEEKRRQRERENEQY PPEGNQAPSPVPAGMIHIPETLSEQEKLVQPTLADIFSDPTVVAPHNAQNIAWKQRDT RVPNPFPYSNQPPVAFEATGSSDTDEYSTLPHVIVLYIVNPFTYGAEKQTALHMRIAI LSFIRAFNSIVGRLPYNYRPQLQLEIIGMESMDPKAVPFPDYLNDPKIPFDILHDNRR KDAPTEYGNHQVARSLSVAVYTHPRVFFPDVYKSVSARCMTAFGPGTQLINTVNSFEK INQESYHRMLKRSKGSDSTEGYGQQGMMPPHQLTKNGYISYQIPSNISCLAPAPPVYQ MDENGKPSIAQMDEQTLFVSYCLIGKEYLVATATDSQGKLIDNCLANIKPRRKNNEVY RYTTKTQILDGMGKLWSFILGVMSSDIKNWRLVVGRLGRIGHGEFRAWTHLLNKTSLL RYSSSLKDICGACRSMPTAVGTPAILSACLITLEPEPSIRIMPEIYDDEETCTKKNSV FHTPGDLSCTHILTFPVGTEINLEVQDQTSDIKAEENWEFGDLDIMEGLDDGDTEIMK DLGLETPSSAAIRHGGQTSMFFSEDSSSIEIQNQPLASGYYISTAPAPELPTWFWATC PSAKRHSPVHLKSSLHINISEVKNDDIAMESSKEKEKEKEKEEKDAHPLESRQTEEVL RHVLESYNALSWLNLNRDTGDRYSCLPIHIQHLLRLYHNVARLLG" gene complement(<415254..>417276) /locus_tag="CAEBREN_06726" /db_xref="WormBase:WBGene00145451" mRNA complement(join(<415254..415384,415989..416230, 416278..416412,416519..416694,416744..417013, 417062..417223,417268..>417276)) /locus_tag="CAEBREN_06726" /product="hypothetical protein" /db_xref="WormBase:CBN06726" /db_xref="WormBase:WBGene00145451" CDS complement(join(415254..415384,415989..416230, 416278..416412,416519..416694,416744..417013, 417062..417223,417268..417276)) /locus_tag="CAEBREN_06726" /note="contains similarity to Pfam domain PF12150; contains similarity to Interpro domain IPR021010 (Cytosolic motility protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35035.1" /db_xref="InterPro:IPR021010" /db_xref="PFAM:PF12150" /db_xref="WormBase:CBN06726" /db_xref="WormBase:WBGene00145451" /translation="MEKGIIDDIWTFQKVGTPFPSNVAKAPGETNKYVALWYKHGKPI MGRAWNDSGVVKVCTFVTDNKIYSGPDVGGSIQLLIMDPGEKPRQFHYDWVNYKKAQS LTMEGKYEMVRCEFSASVYWPDQGLLGCVNTDKLIAHFVDNDGQIKSTKRMEELLVLC KIAGSKESHVSEKEKEKSSAGSSNRLSNVFNDWEDYNWGSPWPVNRNVMSTPKNIPSV GFDQFVALWYRHGKPIMGRAWPKNGRIEASFVDSNREFTGATVGSLQLLISLPPTTVG YDYVWMTYGQVFLFFSFILYLFSSQAVDYRDKDYVPVHLSYICPAIVPVDGKLLLGQV NMKTECATVAMNGTVTQLDGGPVKSIFVLCRQEMAETMLI" gene <419880..>422237 /locus_tag="CAEBREN_08173" /db_xref="WormBase:WBGene00146898" mRNA join(<419880..419915,419984..420100,420734..420926, 420976..421138,421187..421383,421430..421565, 421610..421736,421784..422013,422060..>422237) /locus_tag="CAEBREN_08173" /product="hypothetical protein" /db_xref="WormBase:CBN08173" /db_xref="WormBase:WBGene00146898" CDS join(419880..419915,419984..420100,420734..420926, 420976..421138,421187..421383,421430..421565, 421610..421736,421784..422013,422060..422237) /locus_tag="CAEBREN_08173" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019774 (Aromatic amino acid hydroxylase, C-terminal), IPR001273 (Aromatic amino acid hydroxylase), IPR018301 (Aromatic amino acid hydroxylase, iron/copper binding site), IPR005961 (Phenylalanine-4-hydroxylase, tetrameric form), IPR002912 (Amino acid-binding ACT)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35077.1" /db_xref="InterPro:IPR001273" /db_xref="InterPro:IPR002912" /db_xref="InterPro:IPR005961" /db_xref="InterPro:IPR018301" /db_xref="InterPro:IPR019774" /db_xref="WormBase:CBN08173" /db_xref="WormBase:WBGene00146898" /translation="MPPAGQDDLDFLKYAMESYVADVNADIGKTTIVFTLREKAGALA ETLKLFQAHDVNLSHIESRPSKTHEGCYEVLVEFAEAEDHHKIEEVIEHFQQKAVKKV LVQDWNTKEKQNKDSVPWFPQKISDIDQFANRILSYGAELDCDHPGFKDQTYRERRKF FADIAFNFKHGDKIPTIEYTPEEIATWRTVYNQLTVLYPKNACQEFNYIFPLLQQNCG FGPDRIPQLQDVSDFLKDCTGYTIRPVAGLLSSRDFLAGLAFRVFHSTQYIRHHSAPK YTPEPDICHELLGHVPLFADVEFAQFSQEIGLASLGAPDDIIEKLATLYWFTIEFGLC QQDGQVKAYGAGLLSSFGELEYSLSDKPEVVAFDPAVCCVTKYPITEYQPKYFLAESF SSAKNKLKSWASTINRPFQIRYNAYTQRVEILDKVAALQRLARDIRSDISTLEDALGK VNNLKIKF" gene <423983..>429987 /locus_tag="CAEBREN_12646" /db_xref="WormBase:WBGene00151371" mRNA join(<423983..424038,424102..424145,424193..424458, 424516..424902,424946..425021,425122..425189, 425238..425314,425355..425718,425915..426176, 427308..427563,427895..428051,428119..428286, 428341..428427,428611..428671,428715..428786, 428834..428931,428978..429130,429168..429313, 429363..429478,429525..429613,429658..429813, 429859..>429987) /locus_tag="CAEBREN_12646" /product="hypothetical protein" /db_xref="WormBase:CBN12646" /db_xref="WormBase:WBGene00151371" CDS join(423983..424038,424102..424145,424193..424458, 424516..424902,424946..425021,425122..425189, 425238..425314,425355..425718,425915..426176, 427308..427563,427895..428051,428119..428286, 428341..428427,428611..428671,428715..428786, 428834..428931,428978..429130,429168..429313, 429363..429478,429525..429613,429658..429813, 429859..429987) /locus_tag="CAEBREN_12646" /note="contains similarity to Pfam domain PF01682; contains similarity to Interpro domain IPR002602 (Protein of unknown function DB)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT35061.1" /db_xref="InterPro:IPR002602" /db_xref="PFAM:PF01682" /db_xref="WormBase:CBN12646" /db_xref="WormBase:WBGene00151371" /translation="MENVIHSPLDNKRIYTKDNFYINAIRPKEKEAILYESMLIDGKG SINDIDAFFVTAPPARTTLAPKRLGDNQLPDFVQVSEGSVKEDEQMVKEKPQRTPSSL KLVKLPPQPTSTVAPFKHNSPVRRQLVEAPPPPPQPQLLQPSPVRFPAQPWQIPPLHP QQQSTPNPLTQFFQPIQQPQPLIPPNPFFPQQSVPQPWTSPPLVQPNPNPIPQPPTRN DSFDPYIPIPVGQPPYQFQQNLQQPSQTVESHRQPLHPHGFARTFGQQPIPLPSSAAI DTAFNQAKEREFSVFPPNQILKKPTPPIDYSVDSVAVVTKDQRPPPFVRSIPEKTSEQ LRNFVKVHPHVMNNLQKPLIYRGKEMVIPKMFNFTNAPTPPPIPTRFPQQPLPTQSTA PHAPTQPVSVVASQQSMYFPLMNPNQKLDLCCRKQRISPICQNLCNYDTFNDKTLVAA FLTNQCPGPQLGQAYDCASSKADHTPCCERAGLVSFQGGKCMPFCRTHVATPSNVFDY FVCLQVFETIKGCYRDYSATHPNIFGVTAKSNLDCDFSDDCCWATTREEEQWEIQSAD ELDLNEFRKIFLTGKSRPPPSGNYAIRVENKKKSSLISCAVCSSTGEATVKFRHWQSA NAMLKICWQLAGDGSPTTENCQVARHSKQSKLNTYKFRDIDKNKNFRLVFIVENADAE MDSANEATIIVDRISVDYDSCDHAATHEVEGNVTKKRTRHSKTRQKARSSVTLEKLAQ KDLKMKETLKKQEDKQAYLKNVDQQIAKVVDEVNAKQAAAAAASSSAKTIVPASPKTP VDPLTDLLGSGFVDFLDPNYETNDDEENDESDSEIKDAKKPSVATTTAAPASLTPSPL KSGSAGKPPVKRVETSKKSIDTNGQIASIHKTLKPVEHLPIRPVTTESVVKFLPKGKP MQVQVQNGVFTLPSQPHTQIPLGIPSTCSTSGGCLFEKDFCGWTTPAGVTNKFHLKKI HASSFAEAIVPVGELAVMETETKMTQAHTVIFDALEFSMGTRLIACCLADGQLTCPFS TPSEQTGVLWQFSKFECPINTSKIAFICENFGLTESICAVDNIRIHTSTDVFFLEACQ KDKLHKS" CONTIG join(ABEG02003829.1:1..5693,gap(23611),ABEG02003830.1:1..26229, gap(2960),ABEG02003831.1:1..8280,gap(10),ABEG02003832.1:1..3367, gap(10),ABEG02003833.1:1..55800,gap(10),ABEG02003834.1:1..5280, gap(3362),ABEG02003835.1:1..22277,gap(10),ABEG02003836.1:1..15411, gap(9840),ABEG02003837.1:1..19376,gap(435),ABEG02003838.1:1..10302, gap(10),ABEG02003839.1:1..16301,gap(464),ABEG02003840.1:1..8713, gap(10),ABEG02003841.1:1..1025,gap(10),ABEG02003842.1:1..1155, gap(171),ABEG02003843.1:1..17484,gap(10),ABEG02003844.1:1..8565, gap(10),ABEG02003845.1:1..746,gap(10),ABEG02003846.1:1..4552, gap(490),ABEG02003847.1:1..1785,gap(10),ABEG02003848.1:1..37017, gap(2597),ABEG02003849.1:1..19865,gap(10),ABEG02003850.1:1..766, gap(899),ABEG02003851.1:1..10745,gap(649),ABEG02003852.1:1..802, gap(489),ABEG02003853.1:1..2739,gap(1000),ABEG02003854.1:1..81376) //