LOCUS GL379914 283667 bp DNA linear CON 13-MAR-2015 DEFINITION Caenorhabditis brenneri unplaced genomic scaffold Scfld02_128, whole genome shotgun sequence. ACCESSION GL379914 ABEG02000000 VERSION GL379914.1 DBLINK BioProject: PRJNA20035 BioSample: SAMN02953693 KEYWORDS WGS. SOURCE Caenorhabditis brenneri ORGANISM Caenorhabditis brenneri Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 283667) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis brenneri Sequencing and Analysis Consortium TITLE Direct Submission JOURNAL Submitted (21-JUL-2010) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA REFERENCE 2 (bases 1 to 283667) CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (28-JUL-2011) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA REMARK Annotation update by submitter COMMENT The organism is Caenorhabditis brenneri Sudhaus & Kiontke, 2007; strain PB2801. This strain is derived from the wild isolate LKC28. It was inbred in Scott Baird's laboratory for 20 generations by transferring one gravid female per generation. The strain LKC28 was established from worms collected by Hernan Ruiz in 2003 from roots of Liriope (Convallariaceae) grown in a nursery in Costa Rica (Provinciade Alajuela) (Sudhaus & Kiontke 2007). LKC28 and three other strains of C. brenneri were described in Sudhaus & Kiontke, 2007. Annotation was added to the scaffolds in July 2011. ##Genome-Assembly-Data-START## Assembly Method :: PCAP v. 9/3/04 Assembly Name :: C_brenneri-6.0.1 Genome Coverage :: 9.5x Sequencing Technology :: ABI ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..283667 /organism="Caenorhabditis brenneri" /mol_type="genomic DNA" /submitter_seqid="Scfld02_128" /strain="PB2801" /db_xref="taxon:135651" /chromosome="Unknown" gene complement(2027..2099) /locus_tag="CAEBREN_26961" /db_xref="WormBase:WBGene00187572" tRNA complement(2027..2099) /locus_tag="CAEBREN_26961" /product="tRNA-Lys" /db_xref="WormBase:CBN26961" /db_xref="WormBase:WBGene00187572" gene complement(<17772..>19644) /locus_tag="CAEBREN_05992" /db_xref="WormBase:WBGene00144717" mRNA complement(join(<17772..18612,18660..18941,19331..19491, 19537..>19644)) /locus_tag="CAEBREN_05992" /product="hypothetical protein" /db_xref="WormBase:CBN05992" /db_xref="WormBase:WBGene00144717" CDS complement(join(17772..18612,18660..18941,19331..19491, 19537..19644)) /locus_tag="CAEBREN_05992" /note="contains similarity to Pfam domain PF06542; contains similarity to Interpro domain IPR009497 (Regulator protein, PHA-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34539.1" /db_xref="InterPro:IPR009497" /db_xref="PFAM:PF06542" /db_xref="WormBase:CBN05992" /db_xref="WormBase:WBGene00144717" /translation="MESACPSSSTIFQNQYLIEKIFNSIEGGLMWNLNIRLVCKDFNT TCLDLIEKEHRAMDFRFLDKKDENEKPMPFVNMRPIRLSNLPGYYDFLTTVAGVQIQH LTISRICELDIQEGFDFHQNLYSKLIKDGKKLKSLTGLQEFCQCCPRCSGLASHCEEF GPINEYITLFRTPKHFKRLIINDLFLEQTANNCVEAASSKEQCHKIMLKCLKDLNVTC SKLVIWVSESRDTPGARDHILLPIEVLDCLLKIWSVESAEIKLIWDILETYHEDEWFQ SNFFTEFRFNDPLGSWVSYRKISHIQVDLTESILCVSDLKSFSPDWPNRLGYENLIGN IIKVFNSDEISINFPHKFDGFHVWTQACLENFLRASMIGFHRSLTMNVKLFVESFCLE VVDGKVGFDIPEEFEVLYPVKPLYLESLPEKLVTEKWIGERCRFEDKEKKLEMNVDLY ALEEDFKRKRAAR" gene complement(<21678..>22220) /locus_tag="CAEBREN_32666" /db_xref="WormBase:WBGene00194631" mRNA complement(<21678..>22220) /locus_tag="CAEBREN_32666" /product="hypothetical protein" /db_xref="WormBase:CBN32666" /db_xref="WormBase:WBGene00194631" CDS complement(21678..22220) /locus_tag="CAEBREN_32666" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34509.1" /db_xref="WormBase:CBN32666" /db_xref="WormBase:WBGene00194631" /translation="MVCRLMRMVPRVKLAQRTKKTPPYPKNLLPNAPIHPQVHSPTNP KSPPMALMKPPHYEVQKEFKNSHRSIREKNEDSPDDPSRPVRRHIPYCDFVYQREFKK SHRSIKEKKQVKKDDDASQYSTKTTKSSRKDNMEKTQREDQSEKTRKSMKSGKSEKSG KSVKTENSEKTEKTSKSTKQ" gene <24841..>27608 /gene="Cbn-atg-18" /locus_tag="CAEBREN_09949" /db_xref="WormBase:WBGene00148674" mRNA join(<24841..24911,25718..25815,25882..26533,26586..26753, 27325..27488,27544..>27608) /gene="Cbn-atg-18" /locus_tag="CAEBREN_09949" /product="CBN-ATG-18 protein" /db_xref="WormBase:WBGene00148674" CDS join(24841..24911,25718..25815,25882..26533,26586..26753, 27325..27488,27544..27608) /gene="Cbn-atg-18" /locus_tag="CAEBREN_09949" /note="contains similarity to Pfam domain PF00400; contains similarity to Interpro domains IPR019781 (WD40 repeat, subgroup), IPR001680 (WD40 repeat), IPR015943 (WD40/YVTN repeat-like-containing domain)" /codon_start=1 /product="CBN-ATG-18 protein" /protein_id="EGT34505.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR019781" /db_xref="PFAM:PF00400" /db_xref="WormBase:CBN09949" /db_xref="WormBase:WBGene00148674" /translation="MSSGTATDENPETINYIGFNQDAKVVAVGHKEGYMFYKTADILE NSTLTYEGENLGSLGLNNCLIIERLFSSALMVVISQKDPRVLHVYHFTSRNIICDHRF NKSVLTVRLNRERIVVCLEDCIFIYNLKDMKMMHTIMDTPMNKLGVLDMTSNAGNALV AYPGSTDTGSVHLFDAINLSSVNTFVAHEGTLACLKFNQDGNMIATASTKGTVIRVYS VPTGNRLFEFRRGVSRCVTIYSLCFSSDSKYLASSSNTETVHVFKLEKTEEGSSKPEA ATEGAGWFDTINKTISAYMPSQVMQVSELMTTERSFATAKLPGATRSNQVALVAHKNQ QYVMAATSDGYVYAYRVDPEGGELDNVKQHRIGPQSESCRISPTGEKKESNQSVPNMD DPDDFPPMSHTSG" gene <28190..>30485 /locus_tag="CAEBREN_10747" /db_xref="WormBase:WBGene00149472" mRNA join(<28190..28270,28844..29140,29276..29656, 30327..>30485) /locus_tag="CAEBREN_10747" /product="hypothetical protein" /db_xref="WormBase:CBN10747" /db_xref="WormBase:WBGene00149472" CDS join(28190..28270,28844..29140,29276..29656,30327..30485) /locus_tag="CAEBREN_10747" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34534.1" /db_xref="WormBase:CBN10747" /db_xref="WormBase:WBGene00149472" /translation="MTWLIWVTLLMVGVTVEQKSQRSILLERACAKRPELDFCGPSSP AVVATSVVPLVIPPAPTTTPSTTTTTTTTEAPSTTPSTSSKNTTESVDFDEELDGGNS TTSEPHERLGSLVKLPKPEKSSTEKVIDAVIEKSGVANTGEPLKNTTVAPVEIEDEKG VLVFVSEFCVVERERFIQRCHGDIEKKEVEFCATYIPACTSTTGVLPVMTYCSRYYKY YPPYCKAQLVDPKALQFCFAFEQFCLPEKAAARSQAAQKPKSSLRKCEDVLPEARKVC NPFPNPKDTFNLVRCTQFITNCKRFVDWL" gene complement(<30642..>32325) /locus_tag="CAEBREN_06501" /db_xref="WormBase:WBGene00145226" mRNA complement(join(<30642..30868,30968..31058,32064..32138, 32176..>32325)) /locus_tag="CAEBREN_06501" /product="hypothetical protein" /db_xref="WormBase:CBN06501" /db_xref="WormBase:WBGene00145226" CDS complement(join(30642..30868,30968..31058,32064..32138, 32176..32325)) /locus_tag="CAEBREN_06501" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34499.1" /db_xref="WormBase:CBN06501" /db_xref="WormBase:WBGene00145226" /translation="MLQLLVASTAPSLGKPNVIKCALVKGVKEQTKKLSVFIEWLCDR KKPFDGPKDENTNRLLYLQEFPWFANESCETVRDLMPVVDCEDSVCIKAVIKQPPAER TICETGGAIVRDCWSRVFSDAVKNPRARRDVVRLAQTSDSEETIGIIYTCEGFLCNSS AVSRFSMLFLPMLLLLIRRN" gene <35408..>36568 /locus_tag="CAEBREN_06649" /db_xref="WormBase:WBGene00145374" mRNA join(<35408..35433,35525..35561,35732..>36568) /locus_tag="CAEBREN_06649" /product="hypothetical protein" /db_xref="WormBase:CBN06649" /db_xref="WormBase:WBGene00145374" CDS join(35408..35433,35525..35561,35732..36568) /locus_tag="CAEBREN_06649" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34545.1" /db_xref="WormBase:CBN06649" /db_xref="WormBase:WBGene00145374" /translation="MQSAIGLLLVIASVSNAQVLSVNCAVPPCPALEPLPYGCAAPPC PQPIAPPPPMPAPAPAYNPYPCANPPCIVVEPVPVAPPTPAYNPYPCATPPCPAPYVP EPPMPAPAPVYEPYPCATPPCPAPIAPAPEPVIQHVPVPYPVQVPVPVQVPVPTPVQV PVPVYQPTYCAVPPCQPARAPAPVYAPAPAPAPAPRGIPVYAPAPACAQPPCPAAYQP YGAQGYAPAYAPYATPSYAPGYAPQYAPSYNPYTSVMRSPLAAAAAPGYYPSPFRRAM LLLGSNKSKKVAVVAADEKKKTA" gene complement(<36835..>37960) /locus_tag="CAEBREN_00254" /db_xref="WormBase:WBGene00138979" mRNA complement(join(<36835..37064,37882..>37960)) /locus_tag="CAEBREN_00254" /product="hypothetical protein" /db_xref="WormBase:CBN00254" /db_xref="WormBase:WBGene00138979" CDS complement(join(36835..37064,37882..37960)) /locus_tag="CAEBREN_00254" /note="contains similarity to Pfam domain PF04155; contains similarity to Interpro domain IPR007284 (Ground-like domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34502.1" /db_xref="InterPro:IPR007284" /db_xref="PFAM:PF04155" /db_xref="WormBase:CBN00254" /db_xref="WormBase:WBGene00138979" /translation="MRSLVVLAALAVTVCFAQDNCYINDSGFTCCNKELEASMKGAMG GSDLLGSADSIQKGAESSLGGKFETVVALDDFAYKSHFKEGKSCKIEKNGQYALAWQP " gene complement(<41909..>49378) /locus_tag="CAEBREN_17492" /db_xref="WormBase:WBGene00156217" mRNA complement(join(<41909..42253,42452..42598,42653..43561, 44983..45237,45288..46163,48169..48224,48275..49118, 49295..>49378)) /locus_tag="CAEBREN_17492" /product="hypothetical protein" /db_xref="WormBase:CBN17492" /db_xref="WormBase:WBGene00156217" CDS complement(join(41909..42253,42452..42598,42653..43561, 44983..45237,45288..46163,48169..48224,48275..49118, 49295..49378)) /locus_tag="CAEBREN_17492" /note="contains similarity to Pfam domain PF04802; contains similarity to Interpro domain IPR006887 (Protein of unknown function DUF625)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34546.1" /db_xref="InterPro:IPR006887" /db_xref="PFAM:PF04802" /db_xref="WormBase:CBN17492" /db_xref="WormBase:WBGene00156217" /translation="MSDTNGITDDPMENGNTSIDSVKEENDKEEEIEEISDESMEIEE EQQIKKEETVEKSEKKQEKQEEEKEQEEETPVKMEEEKEEELEEKPVKEEKETEKEDD VPDSPEETIDEKPEVKDEAEETPEVSEDKDEEMEEEKPKESVKNEGKPVEKEKKSVEK EEKDEKEQEEKVKKEEKTPRKEEKKEPVRDEKVREKSEKPEKPEKSPSKTNEKSSPDA RRREEQLRKNKQSPKKRENNPSGKLTNREHILDHIEIKRDATNRVKLYVLCDQRIWED RGTGHVVTYQMPVEEGQPSNAGNTMVLVRLEGQNKNMLESRILMDTVYQKQQETLIVW SETDVMDLALSFQEKTGCEELWQKICEVQGRDPGDPEHTFDDGDDSDAGDIGTTSRVS LPPIEIGRLSELEALLHMHLASNSAREKMTMAIENDEVVSKLCEVFKMCEDIEHTEGL RTFYSIVKNLFMLNRNTVIEMLLDDKHIKAIIGMFEHDPAYKFPRRHREFVYEKAKYR EVLNITAPELREKIHRLYRAQYIQDACLPSLGLFEENLLSTLGSHVFFCRVDIVSMLQ KDKKAMQELFGQLNSYDTEVLRRRDLVLFLKEMISLSTSIPANGPAANKETFFKLQSM FNNEMLESLEPAFTSPDHETRAAMVDILRVLVDSSSQTIRDFLLRQSRTKENNEDVLL NRMIQHVLTDIDVHLTSGSEMILIMKTLLDPETMASTKTDRSEFLLLFYNRCFDTLIK PMLENVSGGIIKKDDYMMANRQSVVLRLLTFCVEHHSFSMRTRCVNQDLMNKILVLLK SKHSFLVLSALKMLQRVVTVKDDKYVRYLVREKVLDPVMECFRKNGNRYNIINSAVLH LFDFVKSEDVRPLIKYVVENHMEIIENVNYVKTFKEIKIRYDQHRDREETMSVRSEDN SVASPRSARKERNEDQWFDDDEDLEVGTASESAEKDVLTVSPVKKEEAGQRKTGIEPM FPSVLKRKNAIDEDEAAPVFGGGAVNALTDKKIVIKVHSERSQSPSPSPLSSPRTSSS PSPGPSGENEVTSSQNNKESSPTPTVKSLVDYDESDDSDEELPSPDAVPSSSTGSPEN EKNDSGEKVVKEGKKLDSPEYNDVSSTSNEEKFETSENGGDGSTMVSEISRKRTSDGC DPVDAKRIRTDESSSPPPKSNVSEA" gene <51756..>52467 /locus_tag="CAEBREN_03787" /db_xref="WormBase:WBGene00142512" mRNA join(<51756..52223,52282..>52467) /locus_tag="CAEBREN_03787" /product="hypothetical protein" /db_xref="WormBase:CBN03787" /db_xref="WormBase:WBGene00142512" CDS join(51756..52223,52282..52467) /locus_tag="CAEBREN_03787" /note="contains similarity to Pfam domain PF03357; contains similarity to Interpro domain IPR005024 (Snf7)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34562.1" /db_xref="InterPro:IPR005024" /db_xref="PFAM:PF03357" /db_xref="WormBase:CBN03787" /db_xref="WormBase:WBGene00142512" /translation="MNRIFGTAKKVPPPDLNNAISNVESRSESIDKKIQKLDGDLMKL RDQMSKMREGPSKNLIKQKALRILKQKRMYENQKGQLDQQCFNMDQSNFAIQGMKDNQ VTVAAMAAGLKTMQKEYKKMNIDKIEDLQDQMEDMLDMNNEIQEAMSRQYDTPDIDEA DLEAELAMLGDELDIGETDTNYLDEALAAPTVPSDKPKTRIAEGLEVDEFGLPKLPA" gene complement(<52631..>54372) /locus_tag="CAEBREN_00586" /db_xref="WormBase:WBGene00139311" mRNA complement(join(<52631..53507,53901..54070,54118..>54372)) /locus_tag="CAEBREN_00586" /product="hypothetical protein" /db_xref="WormBase:CBN00586" /db_xref="WormBase:WBGene00139311" CDS complement(join(52631..53507,53901..54070,54118..54372)) /locus_tag="CAEBREN_00586" /note="contains similarity to Pfam domain PF06542; contains similarity to Interpro domain IPR009497 (Regulator protein, PHA-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34553.1" /db_xref="InterPro:IPR009497" /db_xref="PFAM:PF06542" /db_xref="WormBase:CBN00586" /db_xref="WormBase:WBGene00139311" /translation="MHTVKLCDRDSFEENIIKEKSETVDSIGRFLLIKLLTFARYLLD LISKYLKKRRARVLAEKVFNNPYLVEKIVRNIPLMDYYSTRVVNKTFNCAVLGILRKD NRIMKLELKHYAQTNPVKDVYVVLINLTPLFLPYCAYYFKFLDKLANSCISDSESRED CYKMLEDRFSKPNISCTTLTLCIHENRDTDNTMIHQNHTPIPFEVLQMALKKWKVQSI EIKFIRNWNDMLHIETWSASNYFTGIRFNDPVDDLEGLEFSQKFSHVQVDLSRSFECG KELKLQHLLRGYENVVANIRRIFHPDQISFDFTHWLFMEPSNPQQLLENLLRVSRLAH CQYLTINFKIYLEILDAIQLSEVFKATGSLRPLYHNALNKKHIFKTVKWVGERFRFVD HREKFIMNADLLVTEENYKKVTLKERQATEFMDMFQLDLFE" assembly_gap 55599..55785 /estimated_length=187 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 56260..56553 /estimated_length=294 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<59567..>61663) /locus_tag="CAEBREN_03154" /db_xref="WormBase:WBGene00141879" mRNA complement(join(<59567..60452,61239..61408,61457..>61663)) /locus_tag="CAEBREN_03154" /product="hypothetical protein" /db_xref="WormBase:CBN03154" /db_xref="WormBase:WBGene00141879" CDS complement(join(59567..60452,61239..61408,61457..61663)) /locus_tag="CAEBREN_03154" /note="contains similarity to Pfam domain PF06542; contains similarity to Interpro domain IPR009497 (Regulator protein, PHA-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34530.1" /db_xref="InterPro:IPR009497" /db_xref="PFAM:PF06542" /db_xref="WormBase:CBN03154" /db_xref="WormBase:WBGene00141879" /translation="MRKKSELIDYISQIFDVRFTIFLLDQLIAIAGYLKKRKSGVIAE KVFSNPFLAENIARNLDMHQLNRFRGVNKSLNNSCLGVIRKDHRVMKIEFMQFVHEFL SNQTIIVHVNLVPVRLSEFSSYLRFLDKLANSLVADSQSKEECYKLLEDCFARPNISC TTLALCIHENRDTDNTETPQDHTPIPWEVLKMALRKWKVQRIEIKLVRILNDMPHIES WSRSNYFTGIRFNDPVDNLRGLEFSQKFSQVKVDLSRSVHCTTDLMFQGVHRGYKNVI ANIRRIFHPDQISVEFTHWRMPMDPSNPQELLENFLRISRLGFHQNLAISFKIYITIE EISEVSKKFKAVGPPRAVYKNVMDPKNLFYFKSGKWVGQLYRFLDFGKNFILNAEIFV EEENLKKVMLEEHQAIEFMDMFQLDVFE" gene complement(<62315..>64120) /locus_tag="CAEBREN_23654" /db_xref="WormBase:WBGene00162379" mRNA complement(join(<62315..62317,62620..62911,62958..63506, 63978..>64120)) /locus_tag="CAEBREN_23654" /product="hypothetical protein" /db_xref="WormBase:CBN23654" /db_xref="WormBase:WBGene00162379" CDS complement(join(62315..62317,62620..62911,62958..63506, 63978..64120)) /locus_tag="CAEBREN_23654" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR013785 (Aldolase-type TIM barrel), IPR001093 (IMP dehydrogenase/GMP reductase), IPR008259 (FMN-dependent alpha-hydroxy acid dehydrogenase, active site), IPR004136 (2-nitropropane dioxygenase, NPD)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34527.1" /db_xref="InterPro:IPR001093" /db_xref="InterPro:IPR004136" /db_xref="InterPro:IPR008259" /db_xref="InterPro:IPR013785" /db_xref="WormBase:CBN23654" /db_xref="WormBase:WBGene00162379" /translation="MTPPPTLLTLEDYRKYSERNLVKLARDYYESGAEQEETLRRNVS AFDRLLIRPRCLRSVAKIDTSVEWLPGKKVPFPVGIAPTAFQKMATKDGELSTVRGAA ASKSIMICSSWSTTSIEDIGKEAKIVGAVLWFQLYVYKDRKVTEELIHRAERAGVEAL VLTVDTPVLGRRMKDTYNKFSLPSHLKFANFEGNTQEKMPEGGKGESGFMQYVSSQID PSLDWNTLQWIRTKTKLPVIVKGVMRGDDALLALSNGVDGIIVSNHGGRQMDSCIATI EALPDVLRAVDKRIPVWMDGGVRNGRDILKAVALGARGVFVGRPVLWGLATA" gene complement(<64660..>69987) /locus_tag="CAEBREN_13324" /db_xref="WormBase:WBGene00152049" mRNA complement(join(<64660..64907,68185..68363,68410..68874, 69278..69397,69445..69557,69607..69813,69883..>69987)) /locus_tag="CAEBREN_13324" /product="hypothetical protein" /db_xref="WormBase:CBN13324" /db_xref="WormBase:WBGene00152049" CDS complement(join(64660..64907,68185..68363,68410..68874, 69278..69397,69445..69557,69607..69813,69883..69987)) /locus_tag="CAEBREN_13324" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR013128 (Peptidase C1A, papain), IPR000010 (Proteinase inhibitor I25, cystatin), IPR000169 (Peptidase, cysteine peptidase active site), IPR013201 (Proteinase inhibitor I29, cathepsin propeptide), IPR000668 (Peptidase C1A, papain C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34572.1" /db_xref="InterPro:IPR000010" /db_xref="InterPro:IPR000169" /db_xref="InterPro:IPR000668" /db_xref="InterPro:IPR013128" /db_xref="InterPro:IPR013201" /db_xref="WormBase:CBN13324" /db_xref="WormBase:WBGene00152049" /translation="MGKPAICLLLFSTLLSSLVTSKVLPIDEEDQLLYERFARQGVEK FNQQSNDVYKWELDRTWEVERKLSGGIHYSIFVTLVKTDCKKGQETGETGEKCRKTDT LKKCQVEISRRVKRHGYGLKDIAHIKNCEEEFTRNIAKFDHRKIKLTHDDSVTVQELR KAKIIKPRDYVIWNSFLDFIDRHEKRYENKREVLKRFRVFKRNAKVIRELQKNEQGTA VYGFTKFSDMTTMEFKETMLPYQWEQPVPMDQANFEKEGVTISEEDLPDSFDWREHGA VTQVKNQGSCGSCWAFSTTGNIEGAWFLAKKKLVSLSEQELVDCDSVDQGCNGGLPSN AYKEIIRMGGLEPEDAYPYDGRGETCHLVRKDIAVYINGSVELPHDEVEMQKWLVTKG PISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPT WGEAGYFKLYRGKNVCGVQEMATSSLVN" gene <83042..>84015 /locus_tag="CAEBREN_06327" /db_xref="WormBase:WBGene00145052" mRNA join(<83042..83250,83349..83529,83959..>84015) /locus_tag="CAEBREN_06327" /product="hypothetical protein" /db_xref="WormBase:CBN06327" /db_xref="WormBase:WBGene00145052" CDS join(83042..83250,83349..83529,83959..84015) /locus_tag="CAEBREN_06327" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34569.1" /db_xref="WormBase:CBN06327" /db_xref="WormBase:WBGene00145052" /translation="MGFDASLLKSVLEQFVDEIGEESVDLIEDRPRFAHAVVVVTDDA TGELCQASCIRQLDDVILHETSVANVASEWMDEDIQRALRELTESRGLLDTPRSSVFV EEKHENQKSVTTTTTSTETSRSSSSRVEFPSMSRRTRSSSAARRFH" gene complement(<85078..>86270) /locus_tag="CAEBREN_18571" /db_xref="WormBase:WBGene00157296" mRNA complement(join(<85078..85303,85346..85482,85710..>86270)) /locus_tag="CAEBREN_18571" /product="hypothetical protein" /db_xref="WormBase:CBN18571" /db_xref="WormBase:WBGene00157296" CDS complement(join(85078..85303,85346..85482,85710..86270)) /locus_tag="CAEBREN_18571" /note="contains similarity to Pfam domain PF00400; contains similarity to Interpro domains IPR019781 (WD40 repeat, subgroup), IPR001680 (WD40 repeat), IPR015943 (WD40/YVTN repeat-like-containing domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34507.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR019781" /db_xref="PFAM:PF00400" /db_xref="WormBase:CBN18571" /db_xref="WormBase:WBGene00157296" /translation="MSKPPKPLFTFFGVDGGATCSCVEHPQLFVGSQKGVVRRYGLES KIMEQMVHVDDEERRIQSVEYSNSHLFVHIRSFAVLKLQQTSETGPWSNIQTIEVDHI GFCNSILLNSQLLFVSADNQRYALLCWTSNNGEIKKSLLCDEKDIQPMCMIVGDVDQK EVLIGMEDGSLAICYGDEDSDFGCHQRPKLGREPIFCVASSSKWVAAGCARSPIFLLD RENLDEKKEINYPPDSAGCSSITFSPNSKQILAGFWDGSIRVFSRNRLNVLLVLSNTH SSNVSSLHWLSMKELVIATSSDSTVSLWKLK" gene complement(<87156..>91167) /locus_tag="CAEBREN_08399" /db_xref="WormBase:WBGene00147124" mRNA complement(join(<87156..87411,87458..87711,88030..88157, 88206..90951,91045..>91167)) /locus_tag="CAEBREN_08399" /product="hypothetical protein" /db_xref="WormBase:CBN08399" /db_xref="WormBase:WBGene00147124" CDS complement(join(87156..87411,87458..87711,88030..88157, 88206..90951,91045..91167)) /locus_tag="CAEBREN_08399" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR022075 (Symplekin tight junction protein C-terminal), IPR021850 (Protein of unknown function DUF3453)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34494.1" /db_xref="InterPro:IPR021850" /db_xref="InterPro:IPR022075" /db_xref="WormBase:CBN08399" /db_xref="WormBase:WBGene00147124" /translation="MSYVIHELDDDLESATDRIGETLKEAREAETIDKKIVSLSTAMH LLCAPNISNYTLDNFLTEMLEFADLNDSRIICLIIDFLLKASAKDFTVCNKAVERYSF YLIPNNQIAKYQSVIKRVVVASTNLYPIILEYAINDKDVQAERCWEAFNLMKSRICML VDNDHEGVRTVTVKFLEALILCQSPKPKELDPKSVWAIEANTRFHKISLTDVPRNHRF LSYHKAQLEAEENFSALLKQTSFTGITSQNLIAVIESLCIITRCRPTWENALPRVFDV IKALHSNVPPMLSKGQVKFLRKSFKYNLLRFLKLPASVPLQKKIVTMLTDYLGASSRE VNQSIPQELIQRAAPRPPPNMEPAAKRAKLTNQIFDDDDDDDEPGTSTTKDARTQAID MTAKFILERLNHETVLNLVKISLYTLPTEMPAAFASSYTPIANAGSEPNRQELAELMA VQMTNKEIGPGYEWLQQKKKKEYEARNKARSEGIAIAPTPHHEPSTGRMSMKAPAPVE KPTAVSQQKAKKAFNLVEETEKLTREEAADMFDLAFESVLLAERRVVAGGAKSDYQKL VVRLATRFWEDCSPYEEKLVSFVLKDHKRRSDLALLWLCELYAQYQGYSNCALRIKEK IENNEGSTQAQRLERYDHAMCRILDSMLERNMEKETLFYKILLETPLLTPNATERLKN ACLAKENEHGMSMLRELILTRNRQRPQLLQFLFGLCFLDRPDLRTSCIDTVKELCNLP FIRSSLSDQARMQITDCLEATPPIYMRKDQRNTEWTEEMYKNAFAVYSILLPSDPLLL APLAHVYSQGNGVLKRIILRTLEPVYRQLSQEMIQTLIEDCPHGAETLLARLVVLLSE RVMPSIEFVQKLKNFHDERKMDLRALLPIIGGLPKDEVFRLIPAFIFKAEYQKNVSIL FRRIYSVRDPNTGESIFDPVEIITEYHKIEAKDDKEAELLVKHLEYLFDATHLKPDIA SQAIETIFRWDDVPFLFLHSLYHLYRKFKFDSFVANLFYKVTEKRMYQQSERWKQAFH TCIKELKTKAYPAVLCLATWEEYEELKALLGKEALADFKAIYLTLSTQQQKNMDEKIK EELHDKERENRDRDRRLRREERKEKDRTEKERVNHFQVARVNYTMGWPRKPGRTRTPL GLSSIIFSHFFHEIHRNSLIFS" gene <91870..>96741 /locus_tag="CAEBREN_05940" /db_xref="WormBase:WBGene00144665" mRNA join(<91870..91929,92006..92159,92207..92318,92374..92627, 92672..93276,93330..93532,93754..96362,96641..>96741) /locus_tag="CAEBREN_05940" /product="hypothetical protein" /db_xref="WormBase:CBN05940" /db_xref="WormBase:WBGene00144665" CDS join(91870..91929,92006..92159,92207..92318,92374..92627, 92672..93276,93330..93532,93754..96362,96641..96741) /locus_tag="CAEBREN_05940" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34566.1" /db_xref="WormBase:CBN05940" /db_xref="WormBase:WBGene00144665" /translation="MDSVDIIEQLKWPSLLQKTNAFLKVAEHILESKLDPKSDKEFRK ILFDCFYKYGEIPLELLLQTLPALLQKAVMTREEILSEFTLRIDKIEQIQRTFPAVLN ASIPSFSNFLAAASKIDPEILTTMFVGEELQKEHYRYILVLIFSGLLNDEQKRRLGNM FKIEQLKELFLQHHPHLYLMEERKRYDPERFLRECPTSELESHPLDNMDFIQRLHLMY ERPAVLRNPNIGEHVLYMPFMFLMIQYIPNSTKVLADTQYVEKYDLKTHTAECQSQIQ YAPMDFYHHTLTLERFISYIVTNQLIAPFVSMLEFAPESLKMFIKPWYLPAVIALLPH CHENDRILKRRIVEWIATMLKEIPAMADAFILYFLGIFQSQHYQLDHYLILDFLVEVS TTVYSYQTAARFMFLITTKLPTKAFECLSRIIAKYPAAIPVAAQRIRLSPEDSEEEFR ANMSFLKDCCLGTDDNDEFIAKINECLKDNGFRLGAAVDALYDLVKNDVLELVPIRKQ LQKKVKSYGNEAALVSYCNILSLGAIQQDEESEEDFQNRKITYIQELHEYTCLKDIGS AAWKALGEFQMVDLETALKVTRSSFGETFTRISSDFRPGYIEFLKKQLEFEKESYQRP LYNTSLQTADLPPLLTKIDNYKENLAAKNNGEAWFWTATLPLSASILQLSAPSNKAQT AVRLLKGCLLNVPTADSVEEMLRHMAGWRICVREALNALCESKSNDLLWARDQIVQEG RLSLTQKSESVDNIMMMLTVLADSVEEKLRLIDDKNLVDEVGKAQKPWTISVLEFVAT RLPKEMKEKREQRVNPIYQVMTQSNKSSLHTAIFCVRLLGKHSAIMEFYRNEKIDIAH DPIFESFFGMNHKLQNEQIPNRNMLWITAEAYGADELTAAAFEREYLQIIDEKSPKKM VEPSLSQESIKEFFANLVMSSKSEIGEIQANSKKVMEKIWNNGTEDVKKQIYEGLAEL ALISGSGRKRTVIPIEKISDSTLLRGILEVFDEKHEADPAILRGLLKALADHQRSDGR FLPPVDWLKLLKRAEWQDDPTEQGRLAFLKLACEQQIPDVVFYYSARMTVKELSTVVD NFKTVSRMLPRRQFMWILKQLTSLARCVDEEKSLVSKISETIASFQKDPIVHLFLTHE LPRLVATIGVTDPILNALKEPLEFAGGISRCFDVWLEARNGEKMNIKRIYDLIQDEDQ EISQCAMYALVSFEARKLNTKQKIDKILDVVTVSRIHRSANGDLQRIFILFLSIIVSL NDEVDIPVCWFGSEPEVVKVMSSARKPFFKVLLESEHMRKVAKHIGSFLRPYCDGDES ELYPTWQKAAAQDMLCTLMATFGADALESLMEEDDEFWQSILPVE" gene <97022..>97979 /locus_tag="CAEBREN_24751" /db_xref="WormBase:WBGene00163476" mRNA join(<97022..97133,97693..97799,97848..>97979) /locus_tag="CAEBREN_24751" /product="hypothetical protein" /db_xref="WormBase:CBN24751" /db_xref="WormBase:WBGene00163476" CDS join(97022..97133,97693..97799,97848..97979) /locus_tag="CAEBREN_24751" /note="contains similarity to Pfam domain PF02290; contains similarity to Interpro domains IPR009018 (Signal recognition particle, SRP9/SRP14 subunit), IPR003210 (Signal recognition particle, SRP14 subunit)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34529.1" /db_xref="InterPro:IPR003210" /db_xref="InterPro:IPR009018" /db_xref="PFAM:PF02290" /db_xref="WormBase:CBN24751" /db_xref="WormBase:WBGene00163476" /translation="MSVEQHIPNDQFLQKLTAFYRDSKIRGPKSVYVTMKPYDGRTKA MPKGTGFKEDDEISCIFRAKWGSKKIATEVKAKEVNNFHSQYSAIIIAQMVNLEKRKK TDDDKKKSTGAAKA" gene complement(<98379..>101890) /locus_tag="CAEBREN_16973" /db_xref="WormBase:WBGene00155698" mRNA complement(join(<98379..98471,99364..100028, 100071..100163,100217..100318,100362..100464, 100968..101228,101305..101376,101732..>101890)) /locus_tag="CAEBREN_16973" /product="hypothetical protein" /db_xref="WormBase:CBN16973" /db_xref="WormBase:WBGene00155698" CDS complement(join(98379..98471,99364..100028,100071..100163, 100217..100318,100362..100464,100968..101228, 101305..101376,101732..101890)) /locus_tag="CAEBREN_16973" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002394 (Nicotinic acetylcholine receptor), IPR018000 (Neurotransmitter-gated ion-channel, conserved site), IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding), IPR006029 (Neurotransmitter-gated ion-channel transmembrane domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34516.1" /db_xref="InterPro:IPR002394" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR006202" /db_xref="InterPro:IPR018000" /db_xref="WormBase:CBN16973" /db_xref="WormBase:WBGene00155698" /translation="MSVCALLLTCALFAAPALGSLQERRLYEDLMRNYNNLERPVANH SEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWKDYNLVWDQAEYGNITDVRFPAG KIWKPDVLLYNSVDTNFDSTYQTNMIVYSSGLVHWVPPGIFKISCKIDIQWFPFDEQK CFFKFGSWTYDGYKLDLQPATGGFDISEYLPNGEWALPLTTVERNEKFYDCCPEPYPD VHFYLHMRRRTLYYGFNLIMPCILTTLMTLLGFTLPPDAGEKITLQITVLLSICFFLS IVSEMSPPTSEAVPLLGIFFTCCMIVVTASTVFTVYVLNLHYRTPETHDMGPWVTILF FKTPDIQKMLQTRNLLLYWIPWILRMKRPGHNLTYASLPPLFTSKPNRHSESLIRNIK DNEHSLSRANSFDADCRLNQYIMTQSVSNGLTSMASIPSTMISSANGTSTDVSQQATL LILHRIYHELKIVTKRMIEGDKEEQASNNWKFAAMVVDRLCLYVFTIFIIASTIGIFW SAPYLVA" gene complement(<109151..>111554) /locus_tag="CAEBREN_25121" /db_xref="WormBase:WBGene00163846" mRNA complement(join(<109151..109315,109759..110052, 110297..110494,110596..110698,110747..110937, 110982..111132,111201..111355,111459..>111554)) /locus_tag="CAEBREN_25121" /product="hypothetical protein" /db_xref="WormBase:CBN25121" /db_xref="WormBase:WBGene00163846" CDS complement(join(109151..109315,109759..110052, 110297..110494,110596..110698,110747..110937, 110982..111132,111201..111355,111459..111554)) /locus_tag="CAEBREN_25121" /note="contains similarity to Pfam domain PF02932; contains similarity to Interpro domains IPR002394 (Nicotinic acetylcholine receptor), IPR018000 (Neurotransmitter-gated ion-channel, conserved site), IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding), IPR006029 (Neurotransmitter-gated ion-channel transmembrane domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34573.1" /db_xref="InterPro:IPR002394" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR006202" /db_xref="InterPro:IPR018000" /db_xref="PFAM:PF02932" /db_xref="WormBase:CBN25121" /db_xref="WormBase:WBGene00163846" /translation="MSGYVREERPILDSSKPVKVMLGVSLQQIINLSEKEEQLEVNAW LKFSWRDENLRWEPTAYENVTDLRHPPDALWTPDILLYNSVDSEFDSSYKVNLVNYHT GYINWMPPGIFKVSCKLDIYWFPFDEQICYFKFGSWTYTRDKIELEKGDFDFSEFIPN GEWIIIGHRTNITVKQYECCPEQYEDITFTLHLRRRTLYYSFNLIAPVLLTMVLVILG FTVSPETCEKVGLQISVSLAICIFLTIMSELTPQTSEAVPLLGVFFHTCNFISVLATS FTVYVQSFHFRNQHVHERMGFWMRFILLEWSPWLFRMKMPDRDNNIQTLKDSWKERNR RESMARTAFEYADGPVTQIHTMGIMLKENFEELIYQVKQEKTADEKGIERLRVLQKIY DHVKMIREHDDDNDEDSRVALEWRFAAIVVDRLCLLAFSILIVIVSIVIAWRAPYLFA " assembly_gap 113466..113889 /estimated_length=424 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<115998..>118646) /gene="Cbn-asns-1" /locus_tag="CAEBREN_14455" /db_xref="WormBase:WBGene00153180" mRNA complement(join(<115998..116127,116667..117300, 117352..117798,117937..118068,118199..118271, 118341..118430,118494..>118646)) /gene="Cbn-asns-1" /locus_tag="CAEBREN_14455" /product="CBN-ASNS-1 protein" /db_xref="WormBase:WBGene00153180" CDS complement(join(115998..116127,116667..117300, 117352..117798,117937..118068,118199..118271, 118341..118430,118494..118646)) /gene="Cbn-asns-1" /locus_tag="CAEBREN_14455" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000583 (Glutamine amidotransferase, class-II), IPR001962 (Asparagine synthase), IPR022310 (NAD/GMP synthase), IPR006426 (Asparagine synthase, glutamine-hydrolyzing), IPR014729 (Rossmann-like alpha/beta/alpha sandwich fold)" /codon_start=1 /product="CBN-ASNS-1 protein" /protein_id="EGT34560.1" /db_xref="InterPro:IPR000583" /db_xref="InterPro:IPR001962" /db_xref="InterPro:IPR006426" /db_xref="InterPro:IPR014729" /db_xref="InterPro:IPR022310" /db_xref="WormBase:CBN14455" /db_xref="WormBase:WBGene00153180" /translation="MCGIWAIIGEQVTPQQQDAFMKIVGRGPDLTVLEEVQPNVHLGF HRLAIVMPGDTPSAQPIVGGGLSVVCNGEIYNHQSLKIDSTLTLKNGGSDCAAIITSF VKHNEDLKETCASLDGVFAFIMADSKNVYIGRDPIGVRPLFYGYNSNGSLLIGSEVKC IEELCERVEYFPPGCCATISLASPTRPVQPQQYYAVPSIADRFLSVDCTKTLVRDILV KSVEKRLMGNRNFGFMLSGGLDSSLIASIATRFLKQKPIAFSVGFEDSPDLENARHVA DYLKIPHEVLVITPQQCIDIIPEVVFALETFDPLIIRCGIAHYLLCQHISKSSDVKVL LSGEGADELFGSYAYMQKAPNALHLHKEILRRMSHLHQYDVLRCDRSTSCHGLEIRVP FLDKKFIDLVSRMPPTYKLMPMKLEKHLLRSAFEGWLPNEVLWRSKEGFAEALGKTDL GDILAEHCNKLIPKELYDSRAERFPDRTPETTEEYWYRQIFEETFVYDKMGHLVHTKV YRTAAWHRPDEKENVNNKETETLEVKSDDLLRLRRRSTGSLGVA" gene <122129..>125758 /locus_tag="CAEBREN_23953" /db_xref="WormBase:WBGene00162678" mRNA join(<122129..122189,123998..124133,124184..124608, 124727..125571,125639..>125758) /locus_tag="CAEBREN_23953" /product="hypothetical protein" /db_xref="WormBase:CBN23953" /db_xref="WormBase:WBGene00162678" CDS join(122129..122189,123998..124133,124184..124608, 124727..125571,125639..125758) /locus_tag="CAEBREN_23953" /note="contains similarity to Pfam domain PF07690; contains similarity to Interpro domain IPR011701 (Major facilitator superfamily MFS-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34506.1" /db_xref="InterPro:IPR011701" /db_xref="PFAM:PF07690" /db_xref="WormBase:CBN23953" /db_xref="WormBase:WBGene00162678" /translation="MVVLTKNAVKINYDDAAKSPDQLLRSMSSVHPISDGIPAQQRPL NYRWFPSWRFMTSIMLCFCFGCVHLMNSNMGMAIVCMVNSSVTYDNETYPENAAPLLD WSSDEQGYIFSAFNAGLLVMLFTGGMADKFNAKYMILVSVAIASLANLTLPYMAPISV YWAIFSRFLVGFADALLQPAMNSLITRWFPTSERSYALGLATGGRQIGTLIIIPAAGA LCSQTEIFGGWPSIFYLSGFIGIIFIFSYIFLGADKPSKQSCITDNELKFITIANQSE DVGKKRTERKVPWKNILTSGAVWASVISLVCHEFPLMTLIMFLPSYLHDVHHYHSTEN GILSALPTVSLWFAKIGSSYLNTWLQQNTKWKKDTICKVLNSIGSIGLGVFLLAATFL DKSHAWMAVLFLCLSMASAGLHTPGCQLALVSVAPAYSGAVTGFTFFFVAVSGIIHPI ITKMIVKDRTAAEWNLVFYISTVIAIFPIVIFNVWGSTEVQWWAKSKASMQQDPNNKK MSKASKGSTSTPSIDSIDMA" gene complement(<125997..>128651) /locus_tag="CAEBREN_15002" /db_xref="WormBase:WBGene00153727" mRNA complement(join(<125997..126346,126652..127378, 127737..128092,128137..128209,128266..128464, 128632..>128651)) /locus_tag="CAEBREN_15002" /product="hypothetical protein" /db_xref="WormBase:CBN15002" /db_xref="WormBase:WBGene00153727" CDS complement(join(125997..126346,126652..127378, 127737..128092,128137..128209,128266..128464, 128632..128651)) /locus_tag="CAEBREN_15002" /note="contains similarity to Pfam domain PF03189; contains similarity to Interpro domain IPR004878 (Otopetrin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34570.1" /db_xref="InterPro:IPR004878" /db_xref="PFAM:PF03189" /db_xref="WormBase:CBN15002" /db_xref="WormBase:WBGene00153727" /translation="MTVLWDNFKIHLSPHLFAIYTLVWTIICIIMEFSPAFRSDAYWL SYSIFGCYNLSISILFYVIVWLTSWRRFPILRVPDSEVKGVGASVFFLKLGAMFFCIG SIVLWSIEFFLAFAQDRRPWICIFRTCLYIIFHATQLVFILKSQQITFYTHRLIVYFG LSHNIAVNLWIWLSLCIAKSGISNDDDVVYNITYGRQYPWVLHPTEEPVVVDLIFESK ENKLRAVKLFGTTAITFLTGNVEFCLLAVGVLLSLFYTTAWSKKPMESGETDENLEQT HIKFKNENTEIAIGLGYGLLILFILSISFGDIMRDSNYPKAAGSIVGIFQLSFYTISI IACLIVFQSLFQHIMRKPNYASQGALPHEKALNVIFLLVGAAGEVIYCSVGLLGVIQG DCLENSEGLVLSTFVVRALEVLIQAVLLFYLLTKGNTIHPCVTYGKQTITFLIALNLI LFGFHTLEGSIRSFGFPSKLDNTSKTLLKISLPLVVFFRFHCSVCFAEVWKIMFYDDS STRPSSVTPSSQNSSISPQNSIDSHSEVSEPGFSPRRYAASSLTVNPENRAAPSRPAP PSARGLLS" gene <131156..>131892 /locus_tag="CAEBREN_07506" /db_xref="WormBase:WBGene00146231" mRNA join(<131156..131317,131367..131458,131504..131711, 131761..>131892) /locus_tag="CAEBREN_07506" /product="hypothetical protein" /db_xref="WormBase:CBN07506" /db_xref="WormBase:WBGene00146231" CDS join(131156..131317,131367..131458,131504..131711, 131761..131892) /locus_tag="CAEBREN_07506" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34531.1" /db_xref="WormBase:CBN07506" /db_xref="WormBase:WBGene00146231" /translation="MSGLKLSILGFLILVTPILQAIAVFTPNWFNGMEVDRFGYRGKQ YQMGIVPYSSKEGEWQGFSSVLLYGSMGLAMLDVLIFLRIYVQISHPSQFPSSNPNPP AYKEKESTSEYPYSCIQLLHAIAVSSAVTVAFNGIAFFLMAINIKQNGLDLSFGYSPW FSVAASILTCGIILLAEFIANRKAMKTSPTGPTAPSI" gene <132899..>133906 /locus_tag="CAEBREN_14597" /db_xref="WormBase:WBGene00153322" mRNA join(<132899..133057,133126..133217,133548..133689, 133736..>133906) /locus_tag="CAEBREN_14597" /product="hypothetical protein" /db_xref="WormBase:CBN14597" /db_xref="WormBase:WBGene00153322" CDS join(132899..133057,133126..133217,133548..133689, 133736..133906) /locus_tag="CAEBREN_14597" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34557.1" /db_xref="WormBase:CBN14597" /db_xref="WormBase:WBGene00153322" /translation="MVGLKLSALGFLVFAVFVLEVVAVFTPAWFTFQAADKNSIVAVF SIGIVPYYSNEDTWLAVSSILLFASLALTTINVFLFFGAHFVVKSQGYSRQVIVLLHA LAISSVAVILFNGTAFILMATNINKKGLSFGYSAWFCVSAVVVTFGSILLAEYIVNRK GEEKEDEAPIESAVPPRILTSSFTNMY" gene complement(<134149..>135827) /locus_tag="CAEBREN_03896" /db_xref="WormBase:WBGene00142621" mRNA complement(join(<134149..134412,134467..134599, 134645..134829,134876..135365,135412..135593, 135717..>135827)) /locus_tag="CAEBREN_03896" /product="hypothetical protein" /db_xref="WormBase:CBN03896" /db_xref="WormBase:WBGene00142621" CDS complement(join(134149..134412,134467..134599, 134645..134829,134876..135365,135412..135593, 135717..135827)) /locus_tag="CAEBREN_03896" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34549.1" /db_xref="WormBase:CBN03896" /db_xref="WormBase:WBGene00142621" /translation="MEDSTPSNIEQEILAEIQVSSNKQKRWEESKLARVIRRGAIYFI FWLSLAWCMVLAVAGFVPSILPSNHRELSAMNAGFLLAGVNLGLYGIVTGFEKKSTRE LEHYKSRAAEDKKALALLDQLKQNQELYQQKVEEELRKVTHISVFSVHPNFQSFLWLS RLLIAICSNMLHAMLKYKLVGESYVAGFLFCVFFFSTYAAHVYCDNTAHSYQKSGDKQ REEKLLVKKGTLIDLRQELLTEIQLYRDKQKRWEASKDARRYKNLAMTHVCYSFLIFT TVIIISIFFPSILPPSHAELSAFYAAAIFFSVLLAWYESRKMSLEKRSIDNSNFEDYQ NKVENGARAQRLLEQLKQNHEMYLREVNKEYKTCIITLVRLKNTMMGMMTIGFGIYKV LEGTIVPIVCWIFWIIIYIVSGHFVMKLDDPNLKFIDWDFWRAAWRREKITCKKCRNK MKPS" gene complement(<136778..>137641) /locus_tag="CAEBREN_24895" /db_xref="WormBase:WBGene00163620" mRNA complement(join(<136778..137059,137202..137241, 137287..137471,137531..>137641)) /locus_tag="CAEBREN_24895" /product="hypothetical protein" /db_xref="WormBase:CBN24895" /db_xref="WormBase:WBGene00163620" CDS complement(join(136778..137059,137202..137241, 137287..137471,137531..137641)) /locus_tag="CAEBREN_24895" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34554.1" /db_xref="WormBase:CBN24895" /db_xref="WormBase:WBGene00163620" /translation="MEEPTPSNIEQELLAEIQVYRNKQERWEDSQTARKYKDRAMDIV FKFFFIYVVYMTISLFFPSILPSIHAELSAIYVSIIFFSIILAWFESRTVLSEKKSID NSNFEDYQSKSMRRFANLMSAMIGVMNVGSCKYMTMEYSYVVSGLLLFISPFYQIGLS SYITKMDNPDLLDQDLIRALWRREITWEQWKNKMNEPIWTEKKQF" gene complement(<138135..>139027) /locus_tag="CAEBREN_16671" /db_xref="WormBase:WBGene00155396" mRNA complement(join(<138135..138317,138360..138486, 138532..138716,138917..>139027)) /locus_tag="CAEBREN_16671" /product="hypothetical protein" /db_xref="WormBase:CBN16671" /db_xref="WormBase:WBGene00155396" CDS complement(join(138135..138317,138360..138486, 138532..138716,138917..139027)) /locus_tag="CAEBREN_16671" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34533.1" /db_xref="WormBase:CBN16671" /db_xref="WormBase:WBGene00155396" /translation="MKVSIPSNIEQELLAEIQVYRDKQERLEESKLARMIKEIAIYFI FYLSFAWCVILFVGSFLPSFLPSIHPELSAINAGFLLAGVLLGLYGVVTMWSEKKSIP QLDHYESKAADDKKALVLLDQLKQNQEMYQQKVKEELRKSFLLLSRLLVAVYSYMPFP VLTYTLVGDSFVKALLYAVFLFSTFACSTYCSNKAFSDQKT" gene complement(<140952..>142113) /locus_tag="CAEBREN_00125" /db_xref="WormBase:WBGene00138850" mRNA complement(join(<140952..141341,141384..141516, 141562..141746,141937..>142113)) /locus_tag="CAEBREN_00125" /product="hypothetical protein" /db_xref="WormBase:CBN00125" /db_xref="WormBase:WBGene00138850" CDS complement(join(140952..141341,141384..141516, 141562..141746,141937..142113)) /locus_tag="CAEBREN_00125" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34519.1" /db_xref="WormBase:CBN00125" /db_xref="WormBase:WBGene00138850" /translation="MQEPISNPPEDLKEKLLTKKDKCIDTRSLNKDQELLAEIQVYRG KQKRWEESMLARMIRRIAIHFIAILSMIWFLIMIVALFRPSILPSIHPELSAINAVIL VVGLLLGLFDTATLRSEKRSFDNLNIDHYQNKVEGDKKAQKLLNQLKQNQDMYQQEVE EELRESFSTLSMLMFAIIALLTSAMENYNFVKESYTLSFLAIVLILLASAAEFYCRRK GHPDDKPIDWGLYRALWRNEITLEEFEQRLNLSESQPEAEKMIGNRKERMVKPESEPE PKNGWRDQEKEKNIYKKL" gene complement(<142394..>143337) /locus_tag="CAEBREN_24156" /db_xref="WormBase:WBGene00162881" mRNA complement(join(<142394..142603,142646..142778, 142824..143008,143227..>143337)) /locus_tag="CAEBREN_24156" /product="hypothetical protein" /db_xref="WormBase:CBN24156" /db_xref="WormBase:WBGene00162881" CDS complement(join(142394..142603,142646..142778, 142824..143008,143227..143337)) /locus_tag="CAEBREN_24156" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34575.1" /db_xref="WormBase:CBN24156" /db_xref="WormBase:WBGene00162881" /translation="MEVSTPSNIEQELLAEIQVYRDKQKQWEESKRARTNRRGAVFLI AILSVAWFLIVVSALILPSVLPSIHPALFAINAGFLLTGVLLGLYDTVMMWSEKKSIE KSSLDYLQTKVEEDKKGEVLLNQLKQNREMYQQKINKELKASFVLLSILMVAISSVTS SAVPTYKFLAESYAAFSLCFVLFLLSFAAQAYCLNKAGSIQKLEGKQPPVEK" gene complement(<143637..>144591) /locus_tag="CAEBREN_11446" /db_xref="WormBase:WBGene00150171" mRNA complement(join(<143637..143846,143893..144025, 144071..144255,144472..>144591)) /locus_tag="CAEBREN_11446" /product="hypothetical protein" /db_xref="WormBase:CBN11446" /db_xref="WormBase:WBGene00150171" CDS complement(join(143637..143846,143893..144025, 144071..144255,144472..144591)) /locus_tag="CAEBREN_11446" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34555.1" /db_xref="WormBase:CBN11446" /db_xref="WormBase:WBGene00150171" /translation="MEEPIFNRSLNIEQELLAEIKVYRDKQKRWGESKLARMIRRGAI HLIYWLSLAWFMTTLIALFLPSILPSIHPELSAINAGFLLAGVLLGLYGIATMRSEKR TIAETSLEYYQSIAEGEKKALGLLDQLEQNQETYQQKVEEELRKIFLLLSRLTTAIYG SMTSALLTYKFFGESYVAGLLYAVFFFSLISADVYCHNQACSDQKSKRKQLAVQK" assembly_gap 145380..145389 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 146996..147005 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <148364..>153742 /locus_tag="CAEBREN_26318" /db_xref="WormBase:WBGene00184989" mRNA join(<148364..148468,148542..148748,148796..148908, 148952..149071,149471..149935,149993..150171, 153495..>153742) /locus_tag="CAEBREN_26318" /product="hypothetical protein" /db_xref="WormBase:CBN26318" /db_xref="WormBase:WBGene00184989" CDS join(148364..148468,148542..148748,148796..148908, 148952..149071,149471..149935,149993..150171, 153495..153742) /locus_tag="CAEBREN_26318" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR013128 (Peptidase C1A, papain), IPR000010 (Proteinase inhibitor I25, cystatin), IPR000169 (Peptidase, cysteine peptidase active site), IPR013201 (Proteinase inhibitor I29, cathepsin propeptide), IPR000668 (Peptidase C1A, papain C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34543.1" /db_xref="InterPro:IPR000010" /db_xref="InterPro:IPR000169" /db_xref="InterPro:IPR000668" /db_xref="InterPro:IPR013128" /db_xref="InterPro:IPR013201" /db_xref="WormBase:CBN26318" /db_xref="WormBase:WBGene00184989" /translation="MGKPAICLLLFSTILISLVTSKVLPIDEEDQLLYERFARQGVEK FNQQSNDVYKWELDRTWEVERKLSGGIHYSIFVTLVKTDCKKGQETGETGEKCRKTDT LKKCQVEISRRVKRHGYGLKDIAHIKNCEEEFTRNIAKFDHRKIKLTHDDSVTVQELR KAKIIKPRDYVVWNSFLDFIDRHEKRYENKREVLKRFRVFKRNAKVIRELQKNEQGTA VYGFTKFSDMTTMEFKETMLPYQWEQPVPMDQANFEKEGVTISEEDLPDSFDWREHGA VTQVKNQGSCGSCWAFSTTGNIEGAWFLAKKKLVSLSEQELVDCDSVDQGCNGGLPSN AYKEIIRMGGLEPEDAYPYDGRGETCHLVRKDIAVYINGSVELPHDEVEMQKWLVTKG PISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPT WGEAGYFKLYRGKNVCGVQEMATSSLVN" gene <154264..>155959 /locus_tag="CAEBREN_26319" /db_xref="WormBase:WBGene00189938" mRNA join(<154264..154406,154778..155326,155372..155663, 155825..>155959) /locus_tag="CAEBREN_26319" /product="hypothetical protein" /db_xref="WormBase:CBN26319" /db_xref="WormBase:WBGene00189938" CDS join(154264..154406,154778..155326,155372..155663, 155825..155959) /locus_tag="CAEBREN_26319" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR013785 (Aldolase-type TIM barrel), IPR000262 (FMN-dependent dehydrogenase), IPR001093 (IMP dehydrogenase/GMP reductase), IPR008259 (FMN-dependent alpha-hydroxy acid dehydrogenase, active site), IPR004136 (2-nitropropane dioxygenase, NPD)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34550.1" /db_xref="InterPro:IPR000262" /db_xref="InterPro:IPR001093" /db_xref="InterPro:IPR004136" /db_xref="InterPro:IPR008259" /db_xref="InterPro:IPR013785" /db_xref="WormBase:CBN26319" /db_xref="WormBase:WBGene00189938" /translation="MTQPPTLLTLEDYRKYSERNLVKLARDYYESGAEQEETLRRNVS AFDRLLIRPRCLRSVAKIDTSIEWLPGKKVPFPVGIAPTAFQKMATKDGELSTVRGAA ASKSIMICSSWSTTSIEDIGKEAKIVGAVLWFQLYVYKDRKVTEELIHRAERAGVEAL VLTVDTPVLGRRLKDTYNKFSLPSHLKFANFEGNTQEKMPKGGKGESGFMQYVSSQID PSLDWNTLKWIRTKTKLPVIVKGVMRGDDALLALNAGVDGIIVSNHGGRQMDSCIATI EALPDVLRAVDKRIPVWMDGGVRNGRDILKAVALGARGVFVGRPVLWGLATAGSSGVS SVMEILQNEFRHAMQLSGYRSIEELQKDDNVLVHVSKL" gene complement(<156212..>159361) /locus_tag="CAEBREN_12219" /db_xref="WormBase:WBGene00150944" mRNA complement(join(<156212..156409,156464..156596, 156644..156828,156877..157188,157231..157348, 157394..157578,158619..158780,158829..158961, 159007..159191,159251..>159361)) /locus_tag="CAEBREN_12219" /product="hypothetical protein" /db_xref="WormBase:CBN12219" /db_xref="WormBase:WBGene00150944" CDS complement(join(156212..156409,156464..156596, 156644..156828,156877..157188,157231..157348, 157394..157578,158619..158780,158829..158961, 159007..159191,159251..159361)) /locus_tag="CAEBREN_12219" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34503.1" /db_xref="WormBase:CBN12219" /db_xref="WormBase:WBGene00150944" /translation="MEEPTPSNIEQELLAEIQVYRNKQKRWEDSQTARKYKDRAMDIV FKFFFIYVVYMTISLFFPSILPSIHAELSAIYVSIIFSSIILAWFESRTALSEKKSID NSNFEDFQSKVENNEKAQGLLDQLKHNHEMYLQKLHKEYIYGLRRLSSLMSTMFPLTN VGFYNYKIMENGYVLALAQFAFVYLIIGLTFSELYGVRGAIYFIFWLSLAWCMVLAFA AFVPSILPSNHPDLSAIYAGFLLAGVNLGLYDIVMLPSEKKSITHYESRAAEDKKALA LLDQLKQNQETYQQKVDEEFRKSFLSFSRLLVAICSNMIHANLKYKFVGESYVAGFLF CVFFFSTYAAHVYCDNTAYSYQKPEEKLLVKRETLTDLNIEQKLLAEIQVYRDKQKRW EESKQARLYKNLAMTHVCYSFFVYTTVILISIFFPSILPSNHAELSAFYAAAIFFSVL LAWYESRKVSLEKRSIDNSNFEDYQSKVENGAKAQRLLEQLKQKREMYLQEVNKEYKM CIITLVRLKNTMMGMMTIGFGIYKVLEGTIVPIVCWIFWIFFYIASGHFVMKLDDPNL KFIDWDF" gene complement(<159765..>160646) /locus_tag="CAEBREN_09189" /db_xref="WormBase:WBGene00147914" mRNA complement(join(<159765..159947,159990..160116, 160162..160346,160536..>160646)) /locus_tag="CAEBREN_09189" /product="hypothetical protein" /db_xref="WormBase:CBN09189" /db_xref="WormBase:WBGene00147914" CDS complement(join(159765..159947,159990..160116, 160162..160346,160536..160646)) /locus_tag="CAEBREN_09189" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34518.1" /db_xref="WormBase:CBN09189" /db_xref="WormBase:WBGene00147914" /translation="MEVSIPSNIEQELLAEIQLYRDKQKLLEESKLARMIKEIAIYFI FYLSFAWCLILFVGSFLPSILPSIHPELSAINAGFLLAGVLLGLYGIVMMWSEKKSIT QLEHYESRAADDKKALGLLDQLKQNQEMYQQKVDEELRKSFLLLSRMLVAVYSYMPFP VMAYTLVGDSFVKALLYAVFLFSAFAAQIYCSNMAFSDRKP" assembly_gap 166073..166082 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <169673..>170113 /locus_tag="CAEBREN_26317" /db_xref="WormBase:WBGene00184988" mRNA <169673..>170113 /locus_tag="CAEBREN_26317" /product="hypothetical protein" /db_xref="WormBase:CBN26317" /db_xref="WormBase:WBGene00184988" CDS 169673..170113 /locus_tag="CAEBREN_26317" /note="contains similarity to Pfam domain PF00125; contains similarity to Interpro domains IPR000164 (Histone H3), IPR009072 (Histone-fold), IPR007125 (Histone core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34536.1" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF00125" /db_xref="WormBase:CBN26317" /db_xref="WormBase:WBGene00184988" /translation="MARTKQTARKSTGGKAPRKQLATNAARKKIKSYGGVIKPRRYRP GTVALRDIRRYQRSTELLIRKLPFQRLVREISQELMIDLRFQTSAVMALQEAAEAYLV GLFEDTNLCAIHAKRVTIMPKDMRLARRIRGERDLNSERDMIPF" gene complement(<170797..>171108) /locus_tag="CAEBREN_26316" /db_xref="WormBase:WBGene00184987" mRNA complement(<170797..>171108) /locus_tag="CAEBREN_26316" /product="hypothetical protein" /db_xref="WormBase:CBN26316" /db_xref="WormBase:WBGene00184987" CDS complement(170797..171108) /locus_tag="CAEBREN_26316" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019809 (Histone H4, conserved site), IPR009072 (Histone-fold), IPR004823 (TATA box binding protein associated factor (TAF)), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone), IPR001951 (Histone H4)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34524.1" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR004823" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="InterPro:IPR019809" /db_xref="WormBase:CBN26316" /db_xref="WormBase:WBGene00184987" /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGV KRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFG G" gene <171311..>171721 /locus_tag="CAEBREN_26315" /db_xref="WormBase:WBGene00184986" mRNA <171311..>171721 /locus_tag="CAEBREN_26315" /product="hypothetical protein" /db_xref="WormBase:CBN26315" /db_xref="WormBase:WBGene00184986" CDS 171311..171721 /locus_tag="CAEBREN_26315" /note="contains similarity to Pfam domain PF00125; contains similarity to Interpro domains IPR000164 (Histone H3), IPR009072 (Histone-fold), IPR007125 (Histone core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34515.1" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF00125" /db_xref="WormBase:CBN26315" /db_xref="WormBase:WBGene00184986" /translation="MARTKQTARKSTGGKAPRKQLATKAARKDVKVPGGVKKPHRYRP GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLV GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" gene complement(<172451..>172834) /locus_tag="CAEBREN_04728" /db_xref="WormBase:WBGene00143453" mRNA complement(<172451..>172834) /locus_tag="CAEBREN_04728" /product="hypothetical protein" /db_xref="WormBase:CBN04728" /db_xref="WormBase:WBGene00143453" CDS complement(172451..172834) /locus_tag="CAEBREN_04728" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR007125 (Histone core), IPR002119 (Histone H2A), IPR009072 (Histone-fold), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34520.1" /db_xref="InterPro:IPR002119" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN04728" /db_xref="WormBase:WBGene00143453" /translation="MSGRGKGGKAKTGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQR VGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGV TIAQGGVLPNIQAVLLPKKTGGDKE" gene <173138..>173506 /locus_tag="CAEBREN_25930" /db_xref="WormBase:WBGene00164655" mRNA <173138..>173506 /locus_tag="CAEBREN_25930" /product="hypothetical protein" /db_xref="WormBase:CBN25930" /db_xref="WormBase:WBGene00164655" CDS 173138..173506 /locus_tag="CAEBREN_25930" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR000558 (Histone H2B), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34571.1" /db_xref="InterPro:IPR000558" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN25930" /db_xref="WormBase:WBGene00164655" /translation="MPPKPSAKGAKKAAKTVTKPKDGKKRRHARKESYSVYIYRVLKQ VHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGE LAKHAVSEGTKAVTKYTSSK" gene complement(<174316..>174726) /locus_tag="CAEBREN_26298" /db_xref="WormBase:WBGene00184969" mRNA complement(<174316..>174726) /locus_tag="CAEBREN_26298" /product="hypothetical protein" /db_xref="WormBase:CBN26298" /db_xref="WormBase:WBGene00184969" CDS complement(174316..174726) /locus_tag="CAEBREN_26298" /note="contains similarity to Pfam domain PF00125; contains similarity to Interpro domains IPR000164 (Histone H3), IPR009072 (Histone-fold), IPR007125 (Histone core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34556.1" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF00125" /db_xref="WormBase:CBN26298" /db_xref="WormBase:WBGene00184969" /translation="MARTKQTARKSTGGKAPRKQLATKAARKNTPATGGVKKPHRYRP GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLV GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" assembly_gap 174798..174824 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <175338..>175649 /locus_tag="CAEBREN_25382" /db_xref="WormBase:WBGene00164107" mRNA <175338..>175649 /locus_tag="CAEBREN_25382" /product="hypothetical protein" /db_xref="WormBase:CBN25382" /db_xref="WormBase:WBGene00164107" CDS 175338..175649 /locus_tag="CAEBREN_25382" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019809 (Histone H4, conserved site), IPR009072 (Histone-fold), IPR004823 (TATA box binding protein associated factor (TAF)), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone), IPR001951 (Histone H4)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34512.1" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR004823" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="InterPro:IPR019809" /db_xref="WormBase:CBN25382" /db_xref="WormBase:WBGene00164107" /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGV KRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFG G" gene complement(<176513..>176896) /locus_tag="CAEBREN_21918" /db_xref="WormBase:WBGene00160643" mRNA complement(<176513..>176896) /locus_tag="CAEBREN_21918" /product="hypothetical protein" /db_xref="WormBase:CBN21918" /db_xref="WormBase:WBGene00160643" CDS complement(176513..176896) /locus_tag="CAEBREN_21918" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR007125 (Histone core), IPR002119 (Histone H2A), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34565.1" /db_xref="InterPro:IPR002119" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN21918" /db_xref="WormBase:WBGene00160643" /translation="MSGRGKGGKAKTGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQR VGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGV TIAQGGVLPNIQAVLLPKKTGGDKE" gene <177201..>177569 /locus_tag="CAEBREN_13824" /db_xref="WormBase:WBGene00152549" mRNA <177201..>177569 /locus_tag="CAEBREN_13824" /product="hypothetical protein" /db_xref="WormBase:CBN13824" /db_xref="WormBase:WBGene00152549" CDS 177201..177569 /locus_tag="CAEBREN_13824" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR000558 (Histone H2B), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34517.1" /db_xref="InterPro:IPR000558" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN13824" /db_xref="WormBase:WBGene00152549" /translation="MPPKPSAKGAKKAAKTVTKPKDGKKRRHSRKESYSVYIYRVLKQ VHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGE LAKHAVSEGTKAVTKYTSSK" gene complement(<178432..>178842) /locus_tag="CAEBREN_26299" /db_xref="WormBase:WBGene00184970" mRNA complement(<178432..>178842) /locus_tag="CAEBREN_26299" /product="hypothetical protein" /db_xref="WormBase:CBN26299" /db_xref="WormBase:WBGene00184970" CDS complement(178432..178842) /locus_tag="CAEBREN_26299" /note="contains similarity to Pfam domain PF00125; contains similarity to Interpro domains IPR000164 (Histone H3), IPR009072 (Histone-fold), IPR007125 (Histone core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34547.1" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF00125" /db_xref="WormBase:CBN26299" /db_xref="WormBase:WBGene00184970" /translation="MARTKQTARKSTGGKAPRKQLATKAARKNTPATGGVKKPHRYRP GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLV GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" gene <179159..>179470 /gene="Cbn-his-38" /locus_tag="CAEBREN_20035" /db_xref="WormBase:WBGene00158760" mRNA <179159..>179470 /gene="Cbn-his-38" /locus_tag="CAEBREN_20035" /product="CBN-HIS-38 protein" /db_xref="WormBase:WBGene00158760" CDS 179159..179470 /gene="Cbn-his-38" /locus_tag="CAEBREN_20035" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019809 (Histone H4, conserved site), IPR009072 (Histone-fold), IPR004823 (TATA box binding protein associated factor (TAF)), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone), IPR001951 (Histone H4)" /codon_start=1 /product="CBN-HIS-38 protein" /protein_id="EGT34559.1" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR004823" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="InterPro:IPR019809" /db_xref="WormBase:CBN20035" /db_xref="WormBase:WBGene00158760" /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGV KRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFG G" gene complement(<180308..>180691) /locus_tag="CAEBREN_12640" /db_xref="WormBase:WBGene00151365" mRNA complement(<180308..>180691) /locus_tag="CAEBREN_12640" /product="hypothetical protein" /db_xref="WormBase:CBN12640" /db_xref="WormBase:WBGene00151365" CDS complement(180308..180691) /locus_tag="CAEBREN_12640" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR007125 (Histone core), IPR002119 (Histone H2A), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34541.1" /db_xref="InterPro:IPR002119" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN12640" /db_xref="WormBase:WBGene00151365" /translation="MSGRGKGGKAKTGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQR VGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGV TIAQGGVLPNIQAVLLPKKTGGDKE" gene <180996..>181364 /locus_tag="CAEBREN_09238" /db_xref="WormBase:WBGene00147963" mRNA <180996..>181364 /locus_tag="CAEBREN_09238" /product="hypothetical protein" /db_xref="WormBase:CBN09238" /db_xref="WormBase:WBGene00147963" CDS 180996..181364 /locus_tag="CAEBREN_09238" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR000558 (Histone H2B), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34567.1" /db_xref="InterPro:IPR000558" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN09238" /db_xref="WormBase:WBGene00147963" /translation="MPPKPSAKGAKKAAKTVTKPKDGKKRRHARKESYSVYIYRVLKQ VHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGE LAKHAVSEGTKAVTKYTSSK" gene complement(<182114..>182530) /locus_tag="CAEBREN_26300" /db_xref="WormBase:WBGene00184971" mRNA complement(<182114..>182530) /locus_tag="CAEBREN_26300" /product="hypothetical protein" /db_xref="WormBase:CBN26300" /db_xref="WormBase:WBGene00184971" CDS complement(182114..182530) /locus_tag="CAEBREN_26300" /note="contains similarity to Pfam domain PF00125; contains similarity to Interpro domains IPR000164 (Histone H3), IPR009072 (Histone-fold), IPR007125 (Histone core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34514.1" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF00125" /db_xref="WormBase:CBN26300" /db_xref="WormBase:WBGene00184971" /translation="MARTKQTARKSTGGKAPRKQLATKAARKNVASKVSGGVKKPHRY RPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAY LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" assembly_gap 182877..182965 /estimated_length=89 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <183195..>183506 /locus_tag="CAEBREN_11893" /db_xref="WormBase:WBGene00150618" mRNA <183195..>183506 /locus_tag="CAEBREN_11893" /product="hypothetical protein" /db_xref="WormBase:CBN11893" /db_xref="WormBase:WBGene00150618" CDS 183195..183506 /locus_tag="CAEBREN_11893" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019809 (Histone H4, conserved site), IPR009072 (Histone-fold), IPR004823 (TATA box binding protein associated factor (TAF)), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone), IPR001951 (Histone H4)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34495.1" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR004823" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="InterPro:IPR019809" /db_xref="WormBase:CBN11893" /db_xref="WormBase:WBGene00150618" /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGV KRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFG G" gene complement(<184600..>184983) /locus_tag="CAEBREN_25719" /db_xref="WormBase:WBGene00164444" mRNA complement(<184600..>184983) /locus_tag="CAEBREN_25719" /product="hypothetical protein" /db_xref="WormBase:CBN25719" /db_xref="WormBase:WBGene00164444" CDS complement(184600..184983) /locus_tag="CAEBREN_25719" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR007125 (Histone core), IPR002119 (Histone H2A), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34497.1" /db_xref="InterPro:IPR002119" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN25719" /db_xref="WormBase:WBGene00164444" /translation="MSGRGKGGKAKTGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQR VGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGV TIAQGGVLPNIQAVLLPKKTGGDKE" gene <185288..>185656 /locus_tag="CAEBREN_03439" /db_xref="WormBase:WBGene00142164" mRNA <185288..>185656 /locus_tag="CAEBREN_03439" /product="hypothetical protein" /db_xref="WormBase:CBN03439" /db_xref="WormBase:WBGene00142164" CDS 185288..185656 /locus_tag="CAEBREN_03439" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000558 (Histone H2B), IPR007125 (Histone core), IPR009072 (Histone-fold), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34537.1" /db_xref="InterPro:IPR000558" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN03439" /db_xref="WormBase:WBGene00142164" /translation="MPPKPSAKGAKKAAKTVTKPKDGKKRRHARKESYSVYIYRVLKQ VHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGE LAKHAVSEGTKAVTKYTSSK" gene complement(<186586..>186996) /locus_tag="CAEBREN_26301" /db_xref="WormBase:WBGene00184972" mRNA complement(<186586..>186996) /locus_tag="CAEBREN_26301" /product="hypothetical protein" /db_xref="WormBase:CBN26301" /db_xref="WormBase:WBGene00184972" CDS complement(186586..186996) /locus_tag="CAEBREN_26301" /note="contains similarity to Pfam domain PF00125; contains similarity to Interpro domains IPR000164 (Histone H3), IPR009072 (Histone-fold), IPR007125 (Histone core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34542.1" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF00125" /db_xref="WormBase:CBN26301" /db_xref="WormBase:WBGene00184972" /translation="MARTKQTARKSTGGKAPRKQLATKAARKDVKVPGGVKKPHRYRP GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLV GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" assembly_gap 187764..187773 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <187962..>188273 /locus_tag="CAEBREN_26302" /db_xref="WormBase:WBGene00184973" mRNA <187962..>188273 /locus_tag="CAEBREN_26302" /product="hypothetical protein" /db_xref="WormBase:CBN26302" /db_xref="WormBase:WBGene00184973" CDS 187962..188273 /locus_tag="CAEBREN_26302" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019809 (Histone H4, conserved site), IPR009072 (Histone-fold), IPR004823 (TATA box binding protein associated factor (TAF)), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone), IPR001951 (Histone H4)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34568.1" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR004823" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="InterPro:IPR019809" /db_xref="WormBase:CBN26302" /db_xref="WormBase:WBGene00184973" /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGV KRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFG G" gene complement(<189026..>189409) /locus_tag="CAEBREN_26303" /db_xref="WormBase:WBGene00184974" mRNA complement(<189026..>189409) /locus_tag="CAEBREN_26303" /product="hypothetical protein" /db_xref="WormBase:CBN26303" /db_xref="WormBase:WBGene00184974" CDS complement(189026..189409) /locus_tag="CAEBREN_26303" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR007125 (Histone core), IPR002119 (Histone H2A), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34522.1" /db_xref="InterPro:IPR002119" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN26303" /db_xref="WormBase:WBGene00184974" /translation="MSGRGKGGKAKTGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQR VGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGV TIAQGGVLPNIQAVLLPKKTGGDKE" gene <189714..>190082 /locus_tag="CAEBREN_15504" /db_xref="WormBase:WBGene00154229" mRNA <189714..>190082 /locus_tag="CAEBREN_15504" /product="hypothetical protein" /db_xref="WormBase:CBN15504" /db_xref="WormBase:WBGene00154229" CDS 189714..190082 /locus_tag="CAEBREN_15504" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR000558 (Histone H2B), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34525.1" /db_xref="InterPro:IPR000558" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN15504" /db_xref="WormBase:WBGene00154229" /translation="MPPKPSAKGAKKAAKTVTKPKDGKKRRHSRKESYSVYIYRVLKQ VHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGE LAKHAVSEGTKAVTKYTSSK" gene complement(<190970..>191380) /locus_tag="CAEBREN_26304" /db_xref="WormBase:WBGene00184975" mRNA complement(<190970..>191380) /locus_tag="CAEBREN_26304" /product="hypothetical protein" /db_xref="WormBase:CBN26304" /db_xref="WormBase:WBGene00184975" CDS complement(190970..191380) /locus_tag="CAEBREN_26304" /note="contains similarity to Pfam domain PF00125; contains similarity to Interpro domains IPR000164 (Histone H3), IPR009072 (Histone-fold), IPR007125 (Histone core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34540.1" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF00125" /db_xref="WormBase:CBN26304" /db_xref="WormBase:WBGene00184975" /translation="MARTKQTARKSTGGKAPRKQLATKAARKNTPATGGVKKPHRYRP GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLV GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" gene <191693..>192004 /locus_tag="CAEBREN_26305" /db_xref="WormBase:WBGene00184976" mRNA <191693..>192004 /locus_tag="CAEBREN_26305" /product="hypothetical protein" /db_xref="WormBase:CBN26305" /db_xref="WormBase:WBGene00184976" CDS 191693..192004 /locus_tag="CAEBREN_26305" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019809 (Histone H4, conserved site), IPR009072 (Histone-fold), IPR004823 (TATA box binding protein associated factor (TAF)), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone), IPR001951 (Histone H4)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34493.1" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR004823" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="InterPro:IPR019809" /db_xref="WormBase:CBN26305" /db_xref="WormBase:WBGene00184976" /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGV KRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFG G" gene complement(<192950..>193333) /locus_tag="CAEBREN_23398" /db_xref="WormBase:WBGene00162123" mRNA complement(<192950..>193333) /locus_tag="CAEBREN_23398" /product="hypothetical protein" /db_xref="WormBase:CBN23398" /db_xref="WormBase:WBGene00162123" CDS complement(192950..193333) /locus_tag="CAEBREN_23398" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR007125 (Histone core), IPR002119 (Histone H2A), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34508.1" /db_xref="InterPro:IPR002119" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN23398" /db_xref="WormBase:WBGene00162123" /translation="MSGRGKGGKAKTGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQR VGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGV TIAQGGVLPNIQAVLLPKKTGGDKE" gene <193639..>194007 /locus_tag="CAEBREN_00264" /db_xref="WormBase:WBGene00138989" mRNA <193639..>194007 /locus_tag="CAEBREN_00264" /product="hypothetical protein" /db_xref="WormBase:CBN00264" /db_xref="WormBase:WBGene00138989" CDS 193639..194007 /locus_tag="CAEBREN_00264" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000558 (Histone H2B), IPR007125 (Histone core), IPR009072 (Histone-fold), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34523.1" /db_xref="InterPro:IPR000558" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN00264" /db_xref="WormBase:WBGene00138989" /translation="MPPKPSAKGAKKAAKTVTKPKDGKKRRHSRKESYSVYIYRVLKQ VHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGE LAKHAVSEGTKAVTKYTSSK" gene complement(<195182..>195598) /locus_tag="CAEBREN_26306" /db_xref="WormBase:WBGene00184977" mRNA complement(<195182..>195598) /locus_tag="CAEBREN_26306" /product="hypothetical protein" /db_xref="WormBase:CBN26306" /db_xref="WormBase:WBGene00184977" CDS complement(195182..195598) /locus_tag="CAEBREN_26306" /note="contains similarity to Pfam domain PF00125; contains similarity to Interpro domains IPR000164 (Histone H3), IPR009072 (Histone-fold), IPR007125 (Histone core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34528.1" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF00125" /db_xref="WormBase:CBN26306" /db_xref="WormBase:WBGene00184977" /translation="MARTKQTARKSTGGKAPRKQLATKAARKNVASKVSGGVKKPHRY RPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAY LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" gene <195911..>196222 /locus_tag="CAEBREN_26307" /db_xref="WormBase:WBGene00184978" mRNA <195911..>196222 /locus_tag="CAEBREN_26307" /product="hypothetical protein" /db_xref="WormBase:CBN26307" /db_xref="WormBase:WBGene00184978" CDS 195911..196222 /locus_tag="CAEBREN_26307" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019809 (Histone H4, conserved site), IPR009072 (Histone-fold), IPR004823 (TATA box binding protein associated factor (TAF)), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone), IPR001951 (Histone H4)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34513.1" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR004823" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="InterPro:IPR019809" /db_xref="WormBase:CBN26307" /db_xref="WormBase:WBGene00184978" /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGV KRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFG G" gene complement(<197114..>197482) /locus_tag="CAEBREN_07662" /db_xref="WormBase:WBGene00146387" mRNA complement(<197114..>197482) /locus_tag="CAEBREN_07662" /product="hypothetical protein" /db_xref="WormBase:CBN07662" /db_xref="WormBase:WBGene00146387" CDS complement(197114..197482) /locus_tag="CAEBREN_07662" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR000558 (Histone H2B), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34564.1" /db_xref="InterPro:IPR000558" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN07662" /db_xref="WormBase:WBGene00146387" /translation="MPPKPSAKGAKKAAKTVTKPKDGKKRRHARKESYSVYIYRVLKQ VHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGE LAKHAVSEGTKAVTKYTSSK" gene <197788..>198171 /locus_tag="CAEBREN_28845" /db_xref="WormBase:WBGene00190810" mRNA <197788..>198171 /locus_tag="CAEBREN_28845" /product="hypothetical protein" /db_xref="WormBase:CBN28845" /db_xref="WormBase:WBGene00190810" CDS 197788..198171 /locus_tag="CAEBREN_28845" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR007125 (Histone core), IPR002119 (Histone H2A), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34510.1" /db_xref="InterPro:IPR002119" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN28845" /db_xref="WormBase:WBGene00190810" /translation="MSGRGKGGKAKTGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQR VGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGV TIAQGGVLPNIQAVLLPKKTGGDKE" gene complement(<198970..>199281) /locus_tag="CAEBREN_26309" /db_xref="WormBase:WBGene00184980" mRNA complement(<198970..>199281) /locus_tag="CAEBREN_26309" /product="hypothetical protein" /db_xref="WormBase:CBN26309" /db_xref="WormBase:WBGene00184980" CDS complement(198970..199281) /locus_tag="CAEBREN_26309" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019809 (Histone H4, conserved site), IPR009072 (Histone-fold), IPR004823 (TATA box binding protein associated factor (TAF)), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone), IPR001951 (Histone H4)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34538.1" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR004823" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="InterPro:IPR019809" /db_xref="WormBase:CBN26309" /db_xref="WormBase:WBGene00184980" /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGV KRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFG G" assembly_gap 199698..199707 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <200117..>200527 /locus_tag="CAEBREN_26308" /db_xref="WormBase:WBGene00184979" mRNA <200117..>200527 /locus_tag="CAEBREN_26308" /product="hypothetical protein" /db_xref="WormBase:CBN26308" /db_xref="WormBase:WBGene00184979" CDS 200117..200527 /locus_tag="CAEBREN_26308" /note="contains similarity to Pfam domain PF00125; contains similarity to Interpro domains IPR000164 (Histone H3), IPR009072 (Histone-fold), IPR007125 (Histone core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34501.1" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF00125" /db_xref="WormBase:CBN26308" /db_xref="WormBase:WBGene00184979" /translation="MARTKQTARKSTGGKAPRKQLATKAARKNTPATGGVKKPHRYRP GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLV GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" gene complement(<201204..>201572) /locus_tag="CAEBREN_12681" /db_xref="WormBase:WBGene00151406" mRNA complement(<201204..>201572) /locus_tag="CAEBREN_12681" /product="hypothetical protein" /db_xref="WormBase:CBN12681" /db_xref="WormBase:WBGene00151406" CDS complement(201204..201572) /locus_tag="CAEBREN_12681" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR000558 (Histone H2B), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34532.1" /db_xref="InterPro:IPR000558" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN12681" /db_xref="WormBase:WBGene00151406" /translation="MPPKPSAKGAKKAAKTVTKPKDGKKRRHSRKESYSVYIYRVLKQ VHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGE LAKHAVSEGTKAVTKYTSSK" gene <201878..>202261 /locus_tag="CAEBREN_24326" /db_xref="WormBase:WBGene00163051" mRNA <201878..>202261 /locus_tag="CAEBREN_24326" /product="hypothetical protein" /db_xref="WormBase:CBN24326" /db_xref="WormBase:WBGene00163051" CDS 201878..202261 /locus_tag="CAEBREN_24326" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR007125 (Histone core), IPR002119 (Histone H2A), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34574.1" /db_xref="InterPro:IPR002119" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN24326" /db_xref="WormBase:WBGene00163051" /translation="MSGRGKGGKAKTGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQR VGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGV TIAQGGVLPNIQAVLLPKKTGGDKE" gene complement(<203184..>203495) /locus_tag="CAEBREN_26310" /db_xref="WormBase:WBGene00184981" mRNA complement(<203184..>203495) /locus_tag="CAEBREN_26310" /product="hypothetical protein" /db_xref="WormBase:CBN26310" /db_xref="WormBase:WBGene00184981" CDS complement(203184..203495) /locus_tag="CAEBREN_26310" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019809 (Histone H4, conserved site), IPR009072 (Histone-fold), IPR004823 (TATA box binding protein associated factor (TAF)), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone), IPR001951 (Histone H4)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34498.1" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR004823" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="InterPro:IPR019809" /db_xref="WormBase:CBN26310" /db_xref="WormBase:WBGene00184981" /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGV KRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFG G" assembly_gap 203769..204024 /estimated_length=256 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <204098..>204514 /locus_tag="CAEBREN_26311" /db_xref="WormBase:WBGene00184982" mRNA <204098..>204514 /locus_tag="CAEBREN_26311" /product="hypothetical protein" /db_xref="WormBase:CBN26311" /db_xref="WormBase:WBGene00184982" CDS 204098..204514 /locus_tag="CAEBREN_26311" /note="contains similarity to Pfam domain PF00125; contains similarity to Interpro domains IPR000164 (Histone H3), IPR009072 (Histone-fold), IPR007125 (Histone core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34552.1" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF00125" /db_xref="WormBase:CBN26311" /db_xref="WormBase:WBGene00184982" /translation="MARTKQTARKSTGGKAPRKQLATKAARKNVASKVSGGVKKPHRY RPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAY LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" gene complement(<205275..>205643) /locus_tag="CAEBREN_21763" /db_xref="WormBase:WBGene00160488" mRNA complement(<205275..>205643) /locus_tag="CAEBREN_21763" /product="hypothetical protein" /db_xref="WormBase:CBN21763" /db_xref="WormBase:WBGene00160488" CDS complement(205275..205643) /locus_tag="CAEBREN_21763" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR000558 (Histone H2B), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34526.1" /db_xref="InterPro:IPR000558" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN21763" /db_xref="WormBase:WBGene00160488" /translation="MPPKPSAKGAKKAAKTVTKPKDGKKRRHSRKESYSVYIYRVLKQ VHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGE LAKHAVSEGTKAVTKYTSSK" gene <205970..>206353 /locus_tag="CAEBREN_14707" /db_xref="WormBase:WBGene00153432" mRNA <205970..>206353 /locus_tag="CAEBREN_14707" /product="hypothetical protein" /db_xref="WormBase:CBN14707" /db_xref="WormBase:WBGene00153432" CDS 205970..206353 /locus_tag="CAEBREN_14707" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR007125 (Histone core), IPR002119 (Histone H2A), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34500.1" /db_xref="InterPro:IPR002119" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN14707" /db_xref="WormBase:WBGene00153432" /translation="MSGRGKGGKAKTGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQR VGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGV TIAQGGVLPNIQAVLLPKKTGADKE" gene complement(<206960..>207400) /locus_tag="CAEBREN_26312" /db_xref="WormBase:WBGene00184983" mRNA complement(<206960..>207400) /locus_tag="CAEBREN_26312" /product="hypothetical protein" /db_xref="WormBase:CBN26312" /db_xref="WormBase:WBGene00184983" CDS complement(206960..207400) /locus_tag="CAEBREN_26312" /note="contains similarity to Pfam domain PF00125; contains similarity to Interpro domains IPR000164 (Histone H3), IPR009072 (Histone-fold), IPR007125 (Histone core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34561.1" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF00125" /db_xref="WormBase:CBN26312" /db_xref="WormBase:WBGene00184983" /translation="MARTKQTARKSTGGKAPRKQLATKAARKTNPGTKSGRISSMTTG GVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGA LQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERS" gene complement(<208258..>208686) /locus_tag="CAEBREN_26313" /db_xref="WormBase:WBGene00184984" mRNA complement(<208258..>208686) /locus_tag="CAEBREN_26313" /product="hypothetical protein" /db_xref="WormBase:CBN26313" /db_xref="WormBase:WBGene00184984" CDS complement(208258..208686) /locus_tag="CAEBREN_26313" /note="contains similarity to Pfam domain PF00125; contains similarity to Interpro domains IPR000164 (Histone H3), IPR009072 (Histone-fold), IPR007125 (Histone core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34496.1" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF00125" /db_xref="WormBase:CBN26313" /db_xref="WormBase:WBGene00184984" /translation="MARTKQTARKSTGGKAPRKQLATKAARKPQQARMSATVGPGVKK PHRFRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEA SEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERS" gene complement(<208955..>212076) /locus_tag="CAEBREN_23305" /db_xref="WormBase:WBGene00162030" mRNA complement(join(<208955..209169,209217..209323, 209369..209981,210064..210229,210277..210745, 211020..211131,212055..>212076)) /locus_tag="CAEBREN_23305" /product="hypothetical protein" /db_xref="WormBase:CBN23305" /db_xref="WormBase:WBGene00162030" CDS complement(join(208955..209169,209217..209323, 209369..209981,210064..210229,210277..210745, 211020..211131,212055..212076)) /locus_tag="CAEBREN_23305" /note="contains similarity to Pfam domain PF03189; contains similarity to Interpro domain IPR004878 (Otopetrin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34563.1" /db_xref="InterPro:IPR004878" /db_xref="PFAM:PF03189" /db_xref="WormBase:CBN23305" /db_xref="WormBase:WBGene00162030" /translation="MSSNILTESLTNKISSASTSYSISTDEYTVNHDSEPQWTKNGKA RHFCINMLSSVYALILTMVAFVIEISPTWRSPDMWLAYSIFCVSMYTVAVAYFAYLYL FVLYPNIINSCIFYLFRRGYIKSTGDWILDEPVYNGEGAGTMYLRVGTLFFGSMGSVL WGTEVLLCFFENQRHGIYVVKYLLAVVFTYMQMHFIFSNSKISLKRSNIIAKFGLMHS VAVNLWTWLSICLIKSVSPSRKVFPGLQRKSWITEHQTHFTTDDFAPHDKQLRAIIKL GSNSDLLLTSLVEFSLIAAVICFIIWKNDDPNPGESPKKAKKRSIRFDCSGTSVGIFI GVIFHIISTIVIGMHGILIKSHKSTAADLLVGFTDLLMFLVCLLACLLAFYQMRKLQY RLHAHGEVIDDILLIVGLAGECVYSCAGMDLYLNDRLTKQTVSWITIPSFVLRISEVL VQTVFILFASRMRCYTYSNQENHPGKQVITFLLVCNINLFIYHTFETMESNFGFPVKL PDNYSVMLSIASPIVVFYRFHSSACLAEIWKHTYSRKHHHNHDHDTIDLEERHVIVDK L" gene complement(<214706..>219283) /locus_tag="CAEBREN_26314" /db_xref="WormBase:WBGene00184985" mRNA complement(join(<214706..214908,214952..215058, 215104..215160,215504..215630,215678..215778, 216212..216391,216924..217025,217401..217869, 218044..218127,218198..218523,219174..>219283)) /locus_tag="CAEBREN_26314" /product="hypothetical protein" /db_xref="WormBase:CBN26314" /db_xref="WormBase:WBGene00184985" CDS complement(join(214706..214908,214952..215058, 215104..215160,215504..215630,215678..215778, 216212..216391,216924..217025,217401..217869, 218044..218127,218198..218523,219174..219283)) /locus_tag="CAEBREN_26314" /note="contains similarity to Pfam domain PF03189; contains similarity to Interpro domain IPR004878 (Otopetrin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34511.1" /db_xref="InterPro:IPR004878" /db_xref="PFAM:PF03189" /db_xref="WormBase:CBN26314" /db_xref="WormBase:WBGene00184985" /translation="MKTSIESTSSDDATALSDYSSTLPENLPTWMKNQKAQSFGLKSL TALYTLILTIVAFIIEISPTWQSDAMHIEYTIFCVLMYSIAILYFIYLYCVILYPIVF NTILLYLERMHVLSVHSIKRWMRPEPVFTGEGAGTLYLRLGTLSCCNPGFSLLRVSRF SEPSMTPSLAVSRVFGTLGSVLWGSEIFLCFFTNARHNIYVIKYIFAFVFTYMQMHFL CCNSKIDLPKNSFIASFGMMHCIAVNLWVWFSLCLAKAVYKSDKKTLKLQKNEEKWKK KNMTLADAVLEMVTTTVAYIVTEGEGDFSASEKQLRSLYKLGSAANFLLTTLVEFSLI AAAVYFIIWKHEGEEKPQEQRKKHVRFDCKSTSVGIFAALVLLIGSFVSISMHYIYNN SDKPRVADEVIGIAETVLFCVTLLAVFAAFVRMRKLQYRLHAHGQVVDEILLIVGLAG EIVYCSTGLDLYLNERLTNMQGTSCLTVVAFVFRIVQVVVQSVFILVASSSPALQIYR LHSLAIFWTSRLRSLSASNVLNQPGKQIITFLVVCNINLFIYHTFETIESNFGFPHKM ASVYSALLNMSSPLVVFYRFHSSACLAEIWKHAYSTKYNHSHHHVHKPLEDHHIA" assembly_gap 220539..223565 /estimated_length=3027 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<225237..>228949) /locus_tag="CAEBREN_07928" /db_xref="WormBase:WBGene00146653" mRNA complement(join(<225237..225346,225452..225783, 226472..227333,227514..227586,227645..227779, 227827..228086,228907..>228949)) /locus_tag="CAEBREN_07928" /product="hypothetical protein" /db_xref="WormBase:CBN07928" /db_xref="WormBase:WBGene00146653" CDS complement(join(225237..225346,225452..225783, 226472..227333,227514..227586,227645..227779, 227827..228086,228907..228949)) /locus_tag="CAEBREN_07928" /note="contains similarity to Pfam domain PF03189; contains similarity to Interpro domain IPR004878 (Otopetrin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34535.1" /db_xref="InterPro:IPR004878" /db_xref="PFAM:PF03189" /db_xref="WormBase:CBN07928" /db_xref="WormBase:WBGene00146653" /translation="MVVRTTSKNELARKEPLREKESIVSVASTSTAPPGHLHALPSPS PSEDPLLEHPQWISNPKATRFLVGLLTSMYLLLLTIVSCLIALSSAWNSPDLWLAETI FSLLMYLIAILFFMYTYFMVIYPKPINMLILFLNRKTSWVPRPDRWLISPALHNGEGA GTLYLRLGALLFGTLGSVLWGCEIYLCFAGECVHRLVVSKHIAAIIFTFLQMHFIVCN SKITFSRSNHLASFGMMHCVAVNIWTWFSMCLVKAQVKRLKKEKKELEHYKNSTASYS SSSSSSEEEDAYEPDSTTILEGLVEAVVEKMKPAMSGMSAGPSGYKSAYSDSHYNATA VNTSMLRMQSMARLGDFSSFLLTCLVEYSLIGAAVCFIIWKYMGAPGIEQTVDKRKKK LRMDCRSTTVGLFAGIFFMMAAFVTIGIYTMLYNKKNTDGADRVIGIVNLILFCVALV ATIFGSWRQRVLQYRLHAHGEVIDEILLIIGVVGELVYCSIGFDMIINGRRTGKAVPN LAIAVFTFRIVQVITQAMYILIASRLRCLSSANAQIQPGKQTLTFLVIINITLFVYHT FEACLAEIWKHTYSTKHNNHHGHTVNSPISSPVGDAHV" gene <231141..>232171 /locus_tag="CAEBREN_23350" /db_xref="WormBase:WBGene00162075" mRNA join(<231141..231287,231518..>232171) /locus_tag="CAEBREN_23350" /product="hypothetical protein" /db_xref="WormBase:CBN23350" /db_xref="WormBase:WBGene00162075" CDS join(231141..231287,231518..232171) /locus_tag="CAEBREN_23350" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34558.1" /db_xref="WormBase:CBN23350" /db_xref="WormBase:WBGene00162075" /translation="MFRTDFNREERGAFPPFPPPPLPSAMIAASCAVSVNSFEEAKRL ASSNSSQSPASIALEKREHRFRPADFRPLPPPHVYLEMIRTLAPHQYIDLTYALAGAV LLDLGYRVPEHYPPLPPKIEPFRDLEAEELAHMTEMSSQSSSEGEYSDASEHSRFVEK LKRRKNRERRAAREVRIAARLLSMGSVKEESDGEEQRKKETFSRENAYKEKTLATFIP RPRIQSFFCPKPLFLHPMLPWFPAMIPPPMLSPPETPQSTPPNKGKSE" gene <233713..>238871 /locus_tag="CAEBREN_18696" /db_xref="WormBase:WBGene00157421" mRNA join(<233713..233941,234673..234962,235504..236892, 237374..237682,238056..238276,238331..>238871) /locus_tag="CAEBREN_18696" /product="hypothetical protein" /db_xref="WormBase:CBN18696" /db_xref="WormBase:WBGene00157421" CDS join(233713..233941,234673..234962,235504..236892, 237374..237682,238056..238276,238331..238871) /locus_tag="CAEBREN_18696" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34548.1" /db_xref="WormBase:CBN18696" /db_xref="WormBase:WBGene00157421" /translation="MPKEDKPSTSTEKEDKNKKKKEEGSTSVEFVVKRKNSIVSSSGS SSSSSSSSSSSSSSSSSTSDQSQLLDSDESLFENEKGTMTNLEGSSSSSGDVQLQHCS IKIHDRTEELFRMRDNNNATPNGTVRLVTNENRVPIKENTHFVPIQNNNNNSDGRGPS TSASYSVTKEVVVPQKQAAKQQNKGRQKAKQLSKKERKKLEEREQAEKGLPRVSYPGQ KERPRVLQQQQQHHQFHQHPHDMSDSEFDAVDNQGLQVHQFDDQMQIEGGGVVRDGNM GITPKNAAAKAVFGDNPTEIGFYRAEEDLGEPVEFIDLQKNAQMRYCRYTTTIGNYTQ LPSSIKTMHRMGFGIGASGIPDTEPLMLMLGGAKPFMKRNFSDYVADASKDTNWVADF WLNCSLDDEYATPRFKECMMRLEKHLNEMYMDIKDRFQQEVVRNLYACDLRKVLLRFS EIERVLVNKSLERGCKNKSFLGLKQDQRQSFIVNQVINWTTDHWQDQYEDEEPSPYRA CNILMYYAVRLPHEKHCHDQGHKKCIMLHFLLSQLTYANKATALKHKFFEGNTITHLA AMAGAPCQIDILLRHEAPMNLLNHNFKSPISLTVKRRIVLPTQQFMWHGADLGGCFWL DYIQPKNKEETVIKEWSEYHDHCDISTPPPRAYDYAFGRYRVLNTSFHSWVEALLFDA DKRCPLTVKTAKSPLHQIRIGRDVSDEIAWLKEGGQGYLTKTFRIAVEKSLVEDWPIV LCFIPCRYTKRDATMPNSHPHIVRVPMLTNAPNVAQCIQDKENKRAKGSTERVDYANE LNGMRPYKMFAEPPTFRFGDKGTEYNDMLRSFFTQEDNGMMYAYSLPKVASDSGRTTA MTVTLKITEQAASKFKDCFFMVQALQFRQWKDQTPLFDHSKAATNLQGDERCKEVAQD MNTRKSENCSDEGDRSMADDEAAARRNAIEAQIALTVEERRLREEDEERRQELRRIEQ NKKTALSRAMKGGQKKDKTE" gene <240277..>240957 /locus_tag="CAEBREN_05700" /db_xref="WormBase:WBGene00144425" mRNA join(<240277..240570,240617..240776,240842..>240957) /locus_tag="CAEBREN_05700" /product="hypothetical protein" /db_xref="WormBase:CBN05700" /db_xref="WormBase:WBGene00144425" CDS join(240277..240570,240617..240776,240842..240957) /locus_tag="CAEBREN_05700" /note="contains similarity to Pfam domain PF01966; contains similarity to Interpro domains IPR006674 (Metal-dependent phosphohydrolase, HD subdomain), IPR003607 (Metal-dependent phosphohydrolase, HD domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34551.1" /db_xref="InterPro:IPR003607" /db_xref="InterPro:IPR006674" /db_xref="PFAM:PF01966" /db_xref="WormBase:CBN05700" /db_xref="WormBase:WBGene00144425" /translation="MTSASSLKIFELLDVLDNLKHLKRTGWVKCGVPEPETVACHMYR MAVLAMALEGEIEGLDAIRAVKMALVHDIGEAIAGDITPHCGVSDEEKFDLEKKAIDT IASYVPNVGEEWSMLWKEYEEAASLTARVVKHLDKFDMIVQADKYEQTHAIDLQQFFT STTGVLTMEPFATWDRELREKRDKRIHKE" gene complement(<241139..>244177) /locus_tag="CAEBREN_23543" /db_xref="WormBase:WBGene00162268" mRNA complement(join(<241139..241173,241787..241971, 242024..242438,242570..242875,243982..>244177)) /locus_tag="CAEBREN_23543" /product="hypothetical protein" /db_xref="WormBase:CBN23543" /db_xref="WormBase:WBGene00162268" CDS complement(join(241139..241173,241787..241971, 242024..242438,242570..242875,243982..244177)) /locus_tag="CAEBREN_23543" /note="contains similarity to Pfam domain PF00135; contains similarity to Interpro domain IPR002018 (Carboxylesterase, type B)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34504.1" /db_xref="InterPro:IPR002018" /db_xref="PFAM:PF00135" /db_xref="WormBase:CBN23543" /db_xref="WormBase:WBGene00162268" /translation="MVAVHGGQMIRGSTATYHSDVITNNFVGQDRNIVVVTVPYRLGV FGLPNLPGDLDGVMDRNLVLYAQKLSETQEHVFRFEEESIADFVIDGELLKTHPREIL KSGNFPKKPLLIGTVPYEMRFTQYFNKTGLLNQEELLELCELFGFVGAYQDPYDFVEK CVEFYMEADTFEFPVDDFVFHVPAALLAQSHASEHPVYLYSYKYPGLGFGFTSAPSPV SPVHSEDFVYLFGVHRSSNFTTRDLKIEHIYSGMVADFVNFGVPKGQEWTKLNPEIMN YMDVDFDKDLMMPGMKYEFYKKQTEFWGEEASGQFSFNEVSTKSFDVFPLRELVEAKN ILLKTRNWNADKIVESAKKNIAEIEKLIVESKITNFAWESRVKF" gene complement(<246181..>247012) /locus_tag="CAEBREN_15525" /db_xref="WormBase:WBGene00154250" mRNA complement(join(<246181..246321,246776..>247012)) /locus_tag="CAEBREN_15525" /product="hypothetical protein" /db_xref="WormBase:CBN15525" /db_xref="WormBase:WBGene00154250" CDS complement(join(246181..246321,246776..247012)) /locus_tag="CAEBREN_15525" /note="contains similarity to Pfam domain PF07859; contains similarity to Interpro domain IPR013094 (Alpha/beta hydrolase fold-3)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34521.1" /db_xref="InterPro:IPR013094" /db_xref="PFAM:PF07859" /db_xref="WormBase:CBN15525" /db_xref="WormBase:WBGene00154250" /translation="MSYTTTIESLHNYDNLNISGRWEVKPSYEAQDLLEPFLMNPDFS PLMREDLSNLPPTMVITCEFDILRDEGLVYAERLKKSGVPTTSIHYENGFHAMLNFHG DLDEATKTVNDIEKWTLDTILKS" assembly_gap 247443..257266 /estimated_length=9824 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<273733..>282113) /locus_tag="CAEBREN_05166" /db_xref="WormBase:WBGene00143891" mRNA complement(join(<273733..273792,274071..274179, 275459..275701,275768..275891,277251..277369, 277435..277493,277548..277782,278264..278769, 278816..278921,278970..279994,280400..280526, 280572..280799,280852..280980,281023..281138, 281188..281284,281459..281742,281790..281944, 281993..>282113)) /locus_tag="CAEBREN_05166" /product="hypothetical protein" /db_xref="WormBase:CBN05166" /db_xref="WormBase:WBGene00143891" CDS complement(join(273733..273792,274071..274179, 275459..275701,275768..275891,277251..277369, 277435..277493,277548..277782,278264..278769, 278816..278921,278970..279994,280400..280526, 280572..280799,280852..280980,281023..281138, 281188..281284,281459..281742,281790..281944, 281993..282113)) /locus_tag="CAEBREN_05166" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR002007 (Haem peroxidase, animal), IPR000483 (Cysteine-rich flanking region, C-terminal domain), IPR000372 (Leucine-rich repeat-containing N-terminal domain), IPR003599 (Immunoglobulin subtype), IPR013098 (Immunoglobulin I-set), IPR019791 (Haem peroxidase, animal, subgroup), IPR013783 (Immunoglobulin-like fold), IPR013106 (Immunoglobulin V-set), IPR013151 (Immunoglobulin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT34544.1" /db_xref="InterPro:IPR000372" /db_xref="InterPro:IPR000483" /db_xref="InterPro:IPR002007" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013106" /db_xref="InterPro:IPR013151" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR019791" /db_xref="WormBase:CBN05166" /db_xref="WormBase:WBGene00143891" /translation="MNLPLLLLVISTHLAVGLDKGCPAPCTCDKKGYVVDCSSAGLTR IPKGISPDVRSLTLRNNRIHTLKRSDLEGFRQLETLVLTHNKIKVVEENILDHLPELK RLSLAHNELVYLPPLASDTRPLASLNLKRNRIQFIDEQVFQYFPDLVQIDLSHNRIQS LRTKLFENLGSLKHLHLHANPWNCDCRVARVKDVLRKVEWERKAYCTHPADLRHQALD ELEDSLLTCSKPEEQSWTGEEFKLVCAKNHSSKPVVWLYEGVEVDSSSLDGYEIHDAV ITVPRKTNVNAMTCTYDYDHVPHHRRARQLHGAPQFTYKPRDNSYREGSEVKINCEVM GNPKPNIIWYHNGQRFTSSRKRQLGLSNNVLRIYPFLEEDSGRYTCEAVNSIGKVSHT FSLDLISSVPPNIYEGPQSVSQNLGGSVVFVCKAKGNPIPDYTWSFDGSTIGHIKGRF MVSDDGTELRISNIEKKDEGYYSCMAGNPVGAMSADAKLTVIGGETKKASAPQIDEEL LRAIAQKARQNVENAVEKTRKQLNQDKITNTQDLKRLFRFSTPKQAVELSKAREIYEE SVRLVREHVEKGLILNVDELHPRNVSYESVLHVTHVQALMGLSGCHTGQFKNPCTDTC FHNKYRSFDGQCNNKNKPMYGVSLMPLRRLLTPVYENGFNTPVGWEKGRQYNGFPMPN VREVSRQLVATETITPHSKLSSMVMQWGQFVDHDLTHTVTALSRHSYATGAFCNRTCD NLDPCFNIPLSPRDPRVVSGSAKYPCIEFERSAAVCGSGETSLVFNRVTYREQMNALT SFLDASNVYGSNEVQAQELRDTYNNNGQLRYDITSAAGKEYLPFEKDSNMDCRRNFSE ENPIRCFLAGDLRANEQLALAATHTIFVREHNRIAKKLKAMNANWDGEVIYHETRKIV GAMMQHITFKHWLPVVFGGQAQMDKFVGRYQGYDPAVDASVTNAFATAAFRFGHTIIN PTLFRLDNNFMPIKQGHIALHKAFFTPELVLTEGGVDPLLRGLFASPLKHPMPTQLLN MELIEKLFMKGHEVSLDLAVMNIQRSRDHGLPSYTEYRKFCNLPVPVVWEDMKGYIKD DMIIQKLRGLYGVPQNIDLWVGGIVEEKLENGLFGPTFACIIGEQFRKMRDGDRFWYE KEGVFTPEQLMEIKKVTLSRLLCDNGDDIDRIQKDVFMYPGKEKENYGKCEDVAMMDL KAWNKCCDDVCPTMLDRILRSRHRGSRLHGCNQNGLWRPEGAKWIPANEYCTECVCQR SRVWCSTKEDCSDNRSPF" gene 281328..281399 /locus_tag="CAEBREN_27082" /db_xref="WormBase:WBGene00187693" tRNA 281328..281399 /locus_tag="CAEBREN_27082" /product="tRNA-Thr" /db_xref="WormBase:CBN27082" /db_xref="WormBase:WBGene00187693" CONTIG join(ABEG02003758.1:1..55598,gap(187),ABEG02003759.1:1..474, gap(294),ABEG02003760.1:1..56912,gap(424),ABEG02003761.1:1..31490, gap(10),ABEG02003762.1:1..1606,gap(10),ABEG02003763.1:1..19067, gap(10),ABEG02003764.1:1..8715,gap(27),ABEG02003765.1:1..8052, gap(89),ABEG02003766.1:1..4798,gap(10),ABEG02003767.1:1..11924, gap(10),ABEG02003768.1:1..4061,gap(256),ABEG02003769.1:1..16514, gap(3027),ABEG02003770.1:1..23877,gap(9824), ABEG02003771.1:1..26401) //