LOCUS GL379859 402135 bp DNA linear CON 13-MAR-2015 DEFINITION Caenorhabditis brenneri unplaced genomic scaffold Scfld02_73, whole genome shotgun sequence. ACCESSION GL379859 ABEG02000000 VERSION GL379859.1 DBLINK BioProject: PRJNA20035 BioSample: SAMN02953693 KEYWORDS WGS. SOURCE Caenorhabditis brenneri ORGANISM Caenorhabditis brenneri Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 402135) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis brenneri Sequencing and Analysis Consortium TITLE Direct Submission JOURNAL Submitted (21-JUL-2010) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA REFERENCE 2 (bases 1 to 402135) CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (28-JUL-2011) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA REMARK Annotation update by submitter COMMENT The organism is Caenorhabditis brenneri Sudhaus & Kiontke, 2007; strain PB2801. This strain is derived from the wild isolate LKC28. It was inbred in Scott Baird's laboratory for 20 generations by transferring one gravid female per generation. The strain LKC28 was established from worms collected by Hernan Ruiz in 2003 from roots of Liriope (Convallariaceae) grown in a nursery in Costa Rica (Provinciade Alajuela) (Sudhaus & Kiontke 2007). LKC28 and three other strains of C. brenneri were described in Sudhaus & Kiontke, 2007. Annotation was added to the scaffolds in July 2011. ##Genome-Assembly-Data-START## Assembly Method :: PCAP v. 9/3/04 Assembly Name :: C_brenneri-6.0.1 Genome Coverage :: 9.5x Sequencing Technology :: ABI ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..402135 /organism="Caenorhabditis brenneri" /mol_type="genomic DNA" /submitter_seqid="Scfld02_73" /strain="PB2801" /db_xref="taxon:135651" /chromosome="Unknown" assembly_gap 3691..3700 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<11553..>11974) /locus_tag="CAEBREN_01490" /db_xref="WormBase:WBGene00140215" mRNA complement(join(<11553..11915,11960..>11974)) /locus_tag="CAEBREN_01490" /product="hypothetical protein" /db_xref="WormBase:CBN01490" /db_xref="WormBase:WBGene00140215" CDS complement(join(11553..11915,11960..11974)) /locus_tag="CAEBREN_01490" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57137.1" /db_xref="WormBase:CBN01490" /db_xref="WormBase:WBGene00140215" /translation="MAKNTRKPNATDRAVTRSQSIRDPTLAPQQEQKQWWNSPMKPKN TREYTMPWCNLVLQEVESKFPTITRKAARRKVRRIIREATESDKARWRLLACLPPKQR KRWTWGTNEMKLIPPRGVNKYLL" assembly_gap 15496..15818 /estimated_length=323 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<17571..>19541) /locus_tag="CAEBREN_13374" /db_xref="WormBase:WBGene00152099" mRNA complement(join(<17571..17761,17808..18032,18272..18935, 19250..19360,19404..>19541)) /locus_tag="CAEBREN_13374" /product="hypothetical protein" /db_xref="WormBase:CBN13374" /db_xref="WormBase:WBGene00152099" CDS complement(join(17571..17761,17808..18032,18272..18935, 19250..19360,19404..19541)) /locus_tag="CAEBREN_13374" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57132.1" /db_xref="WormBase:CBN13374" /db_xref="WormBase:WBGene00152099" /translation="MEFSSNFGFTGPYTANSGFNFLEPQHLQNYASTVNSEYTGFNGF NQNQHFLQYPNYPYGTEWYDPYTNYNITPQFTGFGDVNQNPLMNFGWNYNFMGLHTWE PQPYQNFDIGPSPIQSLSTQEDDESDLEEEEDEEEEKDEANESICLDAQPIVPNVLKP ILTNNIKKCVPDESRNAKIIASEKARLQKMSEAERKEYYRRKRLSKWGVDPNTKELSP EDKQRIKKFNEKRVERRRIQRLKEKMILEIPDKLATVGDLEKASGINEKNAIEKVKRA TYRKDRYKKISSEKRKARAQAASLDSSKDSSTPTPKIKPRVRANCKGLTQAQKNARRA ELARNNRRNMSAERKQEMKEKRDLQLKRKKEKMMEELGEEFEAVEAAKIAKKNEATKR WRQNLPAERLQDYSERLKKRRIEVREAEKKKKQRKGKAGTKRNIDCGNTT" gene complement(<20690..>22652) /locus_tag="CAEBREN_10008" /db_xref="WormBase:WBGene00148733" mRNA complement(join(<20690..20763,20812..21027,21074..21145, 21209..21307,21600..21680,21737..21955,22009..22213, 22527..>22652)) /locus_tag="CAEBREN_10008" /product="hypothetical protein" /db_xref="WormBase:CBN10008" /db_xref="WormBase:WBGene00148733" CDS complement(join(20690..20763,20812..21027,21074..21145, 21209..21307,21600..21680,21737..21955,22009..22213, 22527..22652)) /locus_tag="CAEBREN_10008" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57098.1" /db_xref="WormBase:CBN10008" /db_xref="WormBase:WBGene00148733" /translation="MYVFLGKKSYFIFSDSVKNTMKHCRSKRDVSIHLPRIMEGDETF KSNLDMEENLQVIATKSYLTNKMKRKIEKGSVEERVMAILTANSLCQESPSKEGQLEV HPMLSTIREKIDEKCARLENKKRLFAIKELAPVELEVARKLEEQKYKRNLYARNQYHA LPIEIRREMNKRKAAAKRQKSRENSLHKTEVEETKNVQFLGNLSNNDEPLDFAKDPEV LTVPETFEVPEAASSHDINENMEIEGSQTSANSVTIDSRGKTPGKMRIKKPFKPKELT ESQKIQRREEARRKYREMPEDKKKAMMKKGTEYTRKRRQKLREEKAKNAQLQDKNPFN KDEPLDEKNLKMLLDIIQSLGPIPAEQGK" gene complement(<23695..>26255) /locus_tag="CAEBREN_20823" /db_xref="WormBase:WBGene00159548" mRNA complement(join(<23695..23771,24186..24695,24742..24886, 25815..25961,26193..>26255)) /locus_tag="CAEBREN_20823" /product="hypothetical protein" /db_xref="WormBase:CBN20823" /db_xref="WormBase:WBGene00159548" CDS complement(join(23695..23771,24186..24695,24742..24886, 25815..25961,26193..26255)) /locus_tag="CAEBREN_20823" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57095.1" /db_xref="WormBase:CBN20823" /db_xref="WormBase:WBGene00159548" /translation="MGNGYNADPPIYWDGSGEVNKDYTQESNQSDVSQGWSEAPQQQW SDYNHSIGGYYVYPDVYQPDYTGTCQEAYYDSQYATGNDMLAQDSQQTVDTMAPSNEG KPEKPAPKKKKTPKVQEKPEGIPEVDPTPEELLVLKLLDQAKVEMVKEKELLEQEKDE TDEMKRMDKDRVDKERRKLEALRSAITDPNDLEAQKIIEKQRIKLRHVKDTERCRNQR KTAPTPPPEVVERRRAIWAESQRLRYKNLTVEQREKKRARGKAAFQAAQAKIRQEKAE KAAAKKAAEESKEPTEPEMEEQDDGGAGEHETDPIAH" gene complement(<26468..>32583) /locus_tag="CAEBREN_22723" /db_xref="WormBase:WBGene00161448" mRNA complement(join(<26468..26745,26994..27266,27685..28363, 29145..29274,31213..31285,31532..31823,31870..32235, 32368..32454,32530..>32583)) /locus_tag="CAEBREN_22723" /product="hypothetical protein" /db_xref="WormBase:CBN22723" /db_xref="WormBase:WBGene00161448" CDS complement(join(26468..26745,26994..27266,27685..28363, 29145..29274,31213..31285,31532..31823,31870..32235, 32368..32454,32530..32583)) /locus_tag="CAEBREN_22723" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57119.1" /db_xref="WormBase:CBN22723" /db_xref="WormBase:WBGene00161448" /translation="MDQFENVYQPDGVGEYYWNYVDFPVNWCAEPSSCFDNGTSHAKE TSQDPSTPVDLNNVIHEDLPNRQSIANKTKYEIKQQKRKEKYHQLPPRDRYLFNYRNR YQVDPRRTKLTEEEEGKIKRVKTRNAMDTWQRRQKEKFGEQEDSGQSGNENEKEMESM KLSRGTLGNDHLALESDGPKTLNDLLILKNAKNPNGADPYFWRKLKHPPLTRKERQLK HNEQRRKKYRASKTEIYAPREARLQESETARGAVMKVEDRCKQRVNEQDSNPALHEQA TRGSHGNIGYVYTQLHMNEPFYDVTPPTWYDVYEPADYVDANRYDDAYGTVDCVDANQ NLYPYQQLYDIEPIETQILEYDVEPSPPLLFEDPISSAPFGKAQSDEQKEQRRIKRNA QARERYQRLSKAQRQDYMKRGNMYTYGVDPSNPNLTQEDHLHIVKTKEMQLEERRQRY HELPEEEKKEKIRRGNEQRGKRRLKEYLIMSTPVENVTEEVLEQTLDISERKNREVEK YSEWYQRQSEEKKQEIRERDREAKKLKRQSQSMMKTMGQQSFDELVSAPEFQDFSYPV PQDHLQNEPPTANLEYMSSSTTPNQLAIDKLKHEQIKFLRRQRIRENERARYHALTEE QRKEKNRKNCECRRRNADRRKGGRAYRGTSSTSEGWSSEPTHEQLMEEQRKIAIRKAR KNELKRAHYQSLTKEERREHNKKKNAYKKIKLEKKKLENQMKCMDIDVDDPGPLDDVE HIF" gene <33132..>33606 /locus_tag="CAEBREN_08561" /db_xref="WormBase:WBGene00147286" mRNA join(<33132..33478,33525..>33606) /locus_tag="CAEBREN_08561" /product="hypothetical protein" /db_xref="WormBase:CBN08561" /db_xref="WormBase:WBGene00147286" CDS join(33132..33478,33525..33606) /locus_tag="CAEBREN_08561" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57153.1" /db_xref="WormBase:CBN08561" /db_xref="WormBase:WBGene00147286" /translation="MRSIVAFFALALLFTFCYCATQFTATGVIYCPSKDEWEYKVELW EGKNYIGGGKVLDTKKGKGNDQVVFYELVGDTVLTNFPVGHLAIEINHSCKNAKNKFQ IWPGYSMYVPLDSDKAYGFGAHNLGKNDETGGYFQEDRFN" gene <34733..>35319 /locus_tag="CAEBREN_08157" /db_xref="WormBase:WBGene00146882" mRNA join(<34733..34826,34871..34993,35036..>35319) /locus_tag="CAEBREN_08157" /product="hypothetical protein" /db_xref="WormBase:CBN08157" /db_xref="WormBase:WBGene00146882" CDS join(34733..34826,34871..34993,35036..35319) /locus_tag="CAEBREN_08157" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57128.1" /db_xref="WormBase:CBN08157" /db_xref="WormBase:WBGene00146882" /translation="MKSIQSADLSSYKEIYETLFVNYLEEECKDNNCKEIYERCSTGC SYRQFLRYECNDGLESAKTKFCEKEGLMKHTLCFNWPLYAIIGSAVFAVLILLGLGVF FYLRRKKKMQKKKQSGITGIGTGSGTGTGSGTATGATIPQTQGPPKNEEYHNLNMGAT TGGQRY" gene complement(<36089..>38419) /locus_tag="CAEBREN_03720" /db_xref="WormBase:WBGene00142445" mRNA complement(join(<36089..37270,37954..38115,38231..38298, 38347..>38419)) /locus_tag="CAEBREN_03720" /product="hypothetical protein" /db_xref="WormBase:CBN03720" /db_xref="WormBase:WBGene00142445" CDS complement(join(36089..37270,37954..38115,38231..38298, 38347..38419)) /locus_tag="CAEBREN_03720" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57123.1" /db_xref="WormBase:CBN03720" /db_xref="WormBase:WBGene00142445" /translation="MTTSDETYEKIRKIIWDKEDSSVQVFRRQDNFDNEDLEGYESEE GNELFGEEMDPDPQEEEEQIFTVPINMATRGQLAEADRKWKEAAKLKRVRFESDYGMS HDFQEHTSSQRYAMGQEEPAGAVQYLETPNQWTNVETNQQRTLTQVQRPKNFKKLDKM ARTLSTLKSVPGDQEVLQEQYKKFFMEEQRLLSITTDVATPEEWSMAKGIFKRRKKLA ELSFPGKLDGQLFNFPVIMVDDVSSQDKNIPVIRIEDSEGTGRREATKLVSIAPRHQE IQGIEEVPDDDDDLDVVVLSDGDEDEMDEGPRDGDEEVMILDEQIFIEDGIPDEQECQ KPNLNSWQQYKRNPVRKCRKRRFEDPVYVYEEPPVVTKKRKRVRFQKTHSGTLEQQLR TKHAALTPQKRIVPPPPPPPKIIEAQLFIPERLRVAEGLRRQKQQRRRLQEDQLLSIP YDEATPEQIYKAELIQMERQKQKNQGNAFQDVYVVARKACWQSL" gene <39625..>40893 /locus_tag="CAEBREN_22682" /db_xref="WormBase:WBGene00161407" mRNA join(<39625..39724,40484..>40893) /locus_tag="CAEBREN_22682" /product="hypothetical protein" /db_xref="WormBase:CBN22682" /db_xref="WormBase:WBGene00161407" CDS join(39625..39724,40484..40893) /locus_tag="CAEBREN_22682" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57150.1" /db_xref="WormBase:CBN22682" /db_xref="WormBase:WBGene00161407" /translation="MPISEIKEIQLETHEDVYEQLFIHYLDEKCKRNDAEMCKPYLTS TIPSTAATTTAGVEAKTMSYKLFIYGGIAAAVLLVCFCFILILVVVRTDNDKKAAQEA KQQANLEAQMKTKKKKKRKKRGGRTSGTSRHGTTTSRHKKRRKHKTRRSRTSGTGTTR KSTRTGSGY" gene <43987..>44322 /locus_tag="CAEBREN_07532" /db_xref="WormBase:WBGene00146257" mRNA <43987..>44322 /locus_tag="CAEBREN_07532" /product="hypothetical protein" /db_xref="WormBase:CBN07532" /db_xref="WormBase:WBGene00146257" CDS 43987..44322 /locus_tag="CAEBREN_07532" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57147.1" /db_xref="WormBase:CBN07532" /db_xref="WormBase:WBGene00146257" /translation="MSSSFEAQHSLISEEIQRLQRCEQYCLHGLAHQDQQFQTFAATS QNSSGYQEQFKKTEYAAMATTCTYLFVNNLKEQKMYELAEVEKRIQEQKMSETSLKVS GESGGYGFQ" gene <45432..>45809 /locus_tag="CAEBREN_06431" /db_xref="WormBase:WBGene00145156" mRNA join(<45432..45719,45789..>45809) /locus_tag="CAEBREN_06431" /product="hypothetical protein" /db_xref="WormBase:CBN06431" /db_xref="WormBase:WBGene00145156" CDS join(45432..45719,45789..45809) /locus_tag="CAEBREN_06431" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57104.1" /db_xref="WormBase:CBN06431" /db_xref="WormBase:WBGene00145156" /translation="MLVSPFEEERARISDRLEKLNGELRNVSAMMEEFKIKYVRPAMQ IRSPTSAQLFFLNALIQQATNFSIAFFELKKTYNEELEKIKEVDNRETIHNELAKFNM " gene complement(<46439..>47162) /locus_tag="CAEBREN_18851" /db_xref="WormBase:WBGene00157576" mRNA complement(join(<46439..46848,46899..47021,47069..>47162)) /locus_tag="CAEBREN_18851" /product="hypothetical protein" /db_xref="WormBase:CBN18851" /db_xref="WormBase:WBGene00157576" CDS complement(join(46439..46848,46899..47021,47069..47162)) /locus_tag="CAEBREN_18851" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57133.1" /db_xref="WormBase:CBN18851" /db_xref="WormBase:WBGene00157576" /translation="MHGIQEIKLSTHQDVYEQLFIMYLEDECAASDCSQAYDRIVKGC GYHQYHKDFCNNGAVGAVPKYCNLNGGSKSPFCAKHLTSTTTISTTASTTAPTTSSSN TMLIVGAIGGVIFLCMLAVMFFCCFKKQNEKKTDPQPASNSQSGEKTTKRRKKKKKHE STTGSFQSTDGSTMPTTTAATKKHKKNKKKKKGKKKATSTSGTESTGV" gene <47324..>47794 /locus_tag="CAEBREN_17309" /db_xref="WormBase:WBGene00156034" mRNA join(<47324..47691,47743..>47794) /locus_tag="CAEBREN_17309" /product="hypothetical protein" /db_xref="WormBase:CBN17309" /db_xref="WormBase:WBGene00156034" CDS join(47324..47691,47743..47794) /locus_tag="CAEBREN_17309" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57121.1" /db_xref="WormBase:CBN17309" /db_xref="WormBase:WBGene00156034" /translation="MMRSVVFFMMLLSNIAASNDKSRLRAYVALYCPLEKHWSYTAEM WESDGDQGDGDSGNDKLTTRTGTGTNQLQVFDIDQEVEDNLKYGSEAEIEIRIEHDCN LQNTKVNLKLWDELKIPLGQGDTYAFKALHLTQPQGN" gene <48465..>48877 /locus_tag="CAEBREN_21683" /db_xref="WormBase:WBGene00160408" mRNA join(<48465..48613,48658..>48877) /locus_tag="CAEBREN_21683" /product="hypothetical protein" /db_xref="WormBase:CBN21683" /db_xref="WormBase:WBGene00160408" CDS join(48465..48613,48658..48877) /locus_tag="CAEBREN_21683" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57105.1" /db_xref="WormBase:CBN21683" /db_xref="WormBase:WBGene00160408" /translation="MRSIFLFSALFLTFMVVIEAVGVHPDKREAATAVDPNFGHANAG VWKNNGKKREKRYGYYGGYGGYGGYGYGGYGYGGYGGYGGWGGYGRGYGGWGRGYGGY GGYGGGWRRGGWGRGYGWGK" gene complement(<50362..>51359) /locus_tag="CAEBREN_13654" /db_xref="WormBase:WBGene00152379" mRNA complement(join(<50362..50629,51289..>51359)) /locus_tag="CAEBREN_13654" /product="hypothetical protein" /db_xref="WormBase:CBN13654" /db_xref="WormBase:WBGene00152379" CDS complement(join(50362..50629,51289..51359)) /locus_tag="CAEBREN_13654" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57142.1" /db_xref="WormBase:CBN13654" /db_xref="WormBase:WBGene00152379" /translation="MIRGILGSPKPPIAMLWKRLKTTRKTRTARRYYGRGGWGRGYGG RRWGGWGGWGRRYYFYYSPRRRYYYGGYYGRYYGGYYGYGYGSSLYNLCYNWVWGCSI SNYYYYHAKA" gene <52730..>53357 /locus_tag="CAEBREN_25373" /db_xref="WormBase:WBGene00164098" mRNA join(<52730..52956,53003..>53357) /locus_tag="CAEBREN_25373" /product="hypothetical protein" /db_xref="WormBase:CBN25373" /db_xref="WormBase:WBGene00164098" CDS join(52730..52956,53003..53357) /locus_tag="CAEBREN_25373" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57116.1" /db_xref="WormBase:CBN25373" /db_xref="WormBase:WBGene00164098" /translation="MSKILAIILLVAPMLYGIPLIPAEKSEIPKAATPELLKSPKSHY EAERIESDKITEAIGNSQEVEVIEGDYSRNQTKIRTARHGHGGSHSSSSDHSSHSSSG GSHSYSGDHSHYGGWHHHSYSSYSPSYYSSSSYTPSYDYSSSYTPSYYGSYGYGYSNT GYSNNYYGYGNSNYYCYYYGYNCNTYSSYYYGK" gene <56939..>57295 /gene="Cbn-cnc-6" /locus_tag="CAEBREN_02928" /db_xref="WormBase:WBGene00141653" mRNA join(<56939..57090,57142..>57295) /gene="Cbn-cnc-6" /locus_tag="CAEBREN_02928" /product="CBN-CNC-6 protein" /db_xref="WormBase:WBGene00141653" CDS join(56939..57090,57142..57295) /gene="Cbn-cnc-6" /locus_tag="CAEBREN_02928" /codon_start=1 /product="CBN-CNC-6 protein" /protein_id="EGT57127.1" /db_xref="WormBase:CBN02928" /db_xref="WormBase:WBGene00141653" /translation="MRLIILFGLVALIATVFSAPNPGTGKEHQVAEAWSPDHGPFGAA KDGGVDEVDHSRSKRWGGWGWGRPWGMGWGRPWGGYGWRRPWGMGGWGGYGGYGWGR" gene complement(<58361..>60062) /locus_tag="CAEBREN_23513" /db_xref="WormBase:WBGene00162238" mRNA complement(join(<58361..58958,59769..59879,59923..>60062)) /locus_tag="CAEBREN_23513" /product="hypothetical protein" /db_xref="WormBase:CBN23513" /db_xref="WormBase:WBGene00162238" CDS complement(join(58361..58958,59769..59879,59923..60062)) /locus_tag="CAEBREN_23513" /note="contains similarity to Pfam domain PF04435; contains similarity to Interpro domain IPR006570 (SPK)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57159.1" /db_xref="InterPro:IPR006570" /db_xref="PFAM:PF04435" /db_xref="WormBase:CBN23513" /db_xref="WormBase:WBGene00162238" /translation="MMFTPEDDPKMWNFIAENYLIYGPFEIFTKMKESLGYEHVDKSL YYRFRNILAPNLHLTTYNVETKLQIAKKFNILLNEEFKQSLLPTMNLIFDANGYIEDF SWKNDFSWKNMMSMPTTSSEVLLSLATSSPIELKRPKRELNSLDFSTPKKTRRKSTET NNVMNVEDLVSGPFMDSLKEVISETVLASNRKLIQELKSSNLVSSSNGNAMDPTASST TPLSTKHNFLQGLKNLVNRVNTPELEDIRNRINSLEERLEEDDTSLSISSIHSFLDEG LKMIGG" gene complement(<60936..>61956) /gene="Cbn-smi-1" /locus_tag="CAEBREN_24689" /db_xref="WormBase:WBGene00163414" mRNA complement(join(<60936..61202,61402..61536,61582..>61956)) /gene="Cbn-smi-1" /locus_tag="CAEBREN_24689" /product="CBN-SMI-1 protein" /db_xref="WormBase:WBGene00163414" CDS complement(join(60936..61202,61402..61536,61582..61956)) /gene="Cbn-smi-1" /locus_tag="CAEBREN_24689" /note="contains similarity to Pfam domain PF04938; contains similarity to Interpro domain IPR007022 (Survival motor neuron interacting protein 1)" /codon_start=1 /product="CBN-SMI-1 protein" /protein_id="EGT57135.1" /db_xref="InterPro:IPR007022" /db_xref="PFAM:PF04938" /db_xref="WormBase:CBN24689" /db_xref="WormBase:WBGene00163414" /translation="MDQEACLGPDSTDLEDVDADPNAPAMSAAAYFRQMKAERKAAAN VVRVSRNERSVSPEAKKKKKQWLESVGYQKEEDVTTKKNISTLVPSEEWRVKRCRQFG EFRAETAAKIATTKPMIIKELRAPQEENWHEILLEKCLPQFQNVVDKFPNHTGTPPSW QMVFAIPKKHLSQLIEYLIDWSEEEGLSRPIREWIYVLLLVIDLPLVQDVISALRTLL KDCRKLRSQLTPDRKSEADEYSLFITIIGNFFGQKDLADV" gene complement(<62349..>62793) /locus_tag="CAEBREN_29931" /db_xref="WormBase:WBGene00191896" mRNA complement(join(<62349..62532,62729..>62793)) /locus_tag="CAEBREN_29931" /product="hypothetical protein" /db_xref="WormBase:CBN29931" /db_xref="WormBase:WBGene00191896" CDS complement(join(62349..62532,62729..62793)) /locus_tag="CAEBREN_29931" /note="contains similarity to Interpro domain IPR011990 (Tetratricopeptide-like helical)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57106.1" /db_xref="InterPro:IPR011990" /db_xref="WormBase:CBN29931" /db_xref="WormBase:WBGene00191896" /translation="MAALAKLYEEEGNQKMAEHMLREMVRVDPLNCEWWQQLGCSLMK RGDSERATECLTAASQLDRSTPLLPFSVVPMVFPANFR" gene complement(<65221..>67564) /locus_tag="CAEBREN_31683" /db_xref="WormBase:WBGene00193648" mRNA complement(join(<65221..65752,65800..65899,65948..66267, 66310..66395,67185..67284,67329..>67564)) /locus_tag="CAEBREN_31683" /product="hypothetical protein" /db_xref="WormBase:CBN31683" /db_xref="WormBase:WBGene00193648" CDS complement(join(65221..65752,65800..65899,65948..66267, 66310..66395,67185..67284,67329..67564)) /locus_tag="CAEBREN_31683" /note="contains similarity to Interpro domains IPR011990 (Tetratricopeptide-like helical), IPR008940 (Protein prenyltransferase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57110.1" /db_xref="InterPro:IPR008940" /db_xref="InterPro:IPR011990" /db_xref="WormBase:CBN31683" /db_xref="WormBase:WBGene00193648" /translation="MERVAIIRAKDTAAKKQSSGTEGIEWYRKIITCLGDKYTGERLK QKLSRQFAELLIRATVPIEEKSMSEAMQTKAMNMKLYHGSHKTFFTPKSKIEEIILLL LINEVLSTREVLSTINQYQLLAQIYERAMKFANNDSFLWQQFALSAICCGRFSRAIRV FEQSILASTIASESLNSSTTSNGATTSSSTTSSTDSTPRAHPRPNSPDSDMFSSLKLT NNPSCALSVISEYMMISQVLIERFANYEPAIEYSAKAVELCGKEGQLSFLKGRCQLLH AIAYGFRASEEPSWDLKKVQLSKTVQLIEECVSSDPHDYLALYYAAYFHAISRDLESA KDRCSRSLALNGDQPGAIMLLALIFTAYGDLKGALELVINALTEFEHNYGLMVLRLHI ETKFGRIEESLDTCTHLLDFWKKQPVQQQLAYSAGILDEERSQRTLNGTDIIGGSQKT GELCFNQ" assembly_gap 67568..72696 /estimated_length=5129 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<73142..>75655) /locus_tag="CAEBREN_14190" /db_xref="WormBase:WBGene00152915" mRNA complement(join(<73142..73705,75205..75335,75379..>75655)) /locus_tag="CAEBREN_14190" /product="hypothetical protein" /db_xref="WormBase:CBN14190" /db_xref="WormBase:WBGene00152915" CDS complement(join(73142..73705,75205..75335,75379..75655)) /locus_tag="CAEBREN_14190" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57139.1" /db_xref="WormBase:CBN14190" /db_xref="WormBase:WBGene00152915" /translation="METVTPALRKTKKQKVPKPPRIKKETAVKKESRSRHEKKRREEM NEVINEMMELLPEGTGPKKSKKGDHKPRHPDKCFIIGSSVDMIKNSDWRPGLLTDPIT RDVFGLANSFMIFLNNFIITAVEGEYRSVFDIEKNRMLGRDIRCFLDFESGTRLSFLE ATQLLHQFQLRSFLAKSMTCKMKTSPESPSDAILVCVPDDLPKIPEVPTPVAPVEVAP PASPPPSEMERSRPILAALLRRKDPPLETSTPSTSSFLSPTSSNSTLPFPMGVPVNAA PIKTTRKINVPQGPQKRKRLRSMNVIVETFPLDAKEEEKPPKKTRKR" gene complement(<77063..>77595) /locus_tag="CAEBREN_18465" /db_xref="WormBase:WBGene00157190" mRNA complement(join(<77063..77141,77474..>77595)) /locus_tag="CAEBREN_18465" /product="hypothetical protein" /db_xref="WormBase:CBN18465" /db_xref="WormBase:WBGene00157190" CDS complement(join(77063..77141,77474..77595)) /locus_tag="CAEBREN_18465" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57149.1" /db_xref="WormBase:CBN18465" /db_xref="WormBase:WBGene00157190" /translation="MIYPGAGGPELDKMASEKVKKDIGTFITFGLLVEAGKAVFRRPT YPKLILSAAFAAHYFGIDGILV" gene <77978..>79400 /locus_tag="CAEBREN_06640" /db_xref="WormBase:WBGene00145365" mRNA join(<77978..78127,78173..78311,78359..78462,78513..78635, 78711..>79400) /locus_tag="CAEBREN_06640" /product="hypothetical protein" /db_xref="WormBase:CBN06640" /db_xref="WormBase:WBGene00145365" CDS join(77978..78127,78173..78311,78359..78462,78513..78635, 78711..79400) /locus_tag="CAEBREN_06640" /note="contains similarity to Pfam domain PF07534; contains similarity to Interpro domain IPR006571 (TLDc)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57157.1" /db_xref="InterPro:IPR006571" /db_xref="PFAM:PF07534" /db_xref="WormBase:CBN06640" /db_xref="WormBase:WBGene00145365" /translation="MGNDHSKRKDTSEKKSEGESACAKSSNPQNDAYFSRISDGKNEV SAEKLVRLFDQDLAESLLKYFTGSKHEKYVTREQFNRKFTPLYGTSTDIYVAMLEPVH HFIKVCSDSAGASAIQGDEHFIKILVEKMTSGKTGVEAVESMLSWRRDNCIKFPQAVQ NRIVSAVTGNKIPNPDYSSDILTPLQMYYLQSALPNFFFPAKPSETPGGGHWTPLYTS LQHGISTNRFETLVFDYRGPTVTIFRLKDERVVALASDQEWRHSGSRFGGPFTSFFEI LPQLRRIDEPNSIYCNLKLRSCSFGISFKNELKIGKDFDEILDIEVWGCAGAGTLADQ QKLKNWQKQQAEKHKKVPLPGNWDDNPDKTLLEMAGFQFSNERAAMEMEAKKKEQDKS QSEKSASEK" gene complement(<82544..>84956) /locus_tag="CAEBREN_03038" /db_xref="WormBase:WBGene00141763" mRNA complement(join(<82544..82960,83012..83143,83856..83941, 84640..84821,84868..>84956)) /locus_tag="CAEBREN_03038" /product="hypothetical protein" /db_xref="WormBase:CBN03038" /db_xref="WormBase:WBGene00141763" CDS complement(join(82544..82960,83012..83143,83856..83941, 84640..84821,84868..84956)) /locus_tag="CAEBREN_03038" /note="contains similarity to Pfam domain PF00907; contains similarity to Interpro domain IPR001699 (Transcription factor, T-box)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57097.1" /db_xref="InterPro:IPR001699" /db_xref="PFAM:PF00907" /db_xref="WormBase:CBN03038" /db_xref="WormBase:WBGene00141763" /translation="MQILLKLLDNSLWREFDAHQNEMIITKIGRNLFPILEFSFKGLS EHSKYRIGITMEAMSFNKLKYTGGRWESLDVVEELLKPNEVFLEKSGRELLQRGLKLE KLKLTNSKDAVHKSDQMIRVQSMRQYIPTINLYEFHPHGGFHHVGKFQFPETKFIAVT AYQSDSVKHLKVQKNKFAQGFRDGAKTSSSSPSTIPTGTKRPTSTTSSNSSPDSTLSI DVPDFLLAKKERKDAPTFTTQQENVTPTSNFYHFPMPPFQGFQQNFQHSFQGFDANFN PANFWGPQNQHYDYHNNPYAWNQWS" gene complement(<86676..>102451) /locus_tag="CAEBREN_05905" /db_xref="WormBase:WBGene00144630" mRNA complement(join(<86676..86687,86737..86799,86986..88210, 88263..88904,89247..89374,90776..90854,92325..92562, 93137..93406,93452..93628,96212..96335,98385..98533, 98582..98696,98741..98892,101721..101923,102129..>102451)) /locus_tag="CAEBREN_05905" /product="hypothetical protein" /db_xref="WormBase:CBN05905" /db_xref="WormBase:WBGene00144630" CDS complement(join(86676..86687,86737..86799,86986..88210, 88263..88904,89247..89374,90776..90854,92325..92562, 93137..93406,93452..93628,96212..96335,98385..98533, 98582..98696,98741..98892,101721..101923,102129..102451)) /locus_tag="CAEBREN_05905" /note="contains similarity to Pfam domain PF07653; contains similarity to Interpro domains IPR008957 (Fibronectin type III domain), IPR001452 (Src homology-3 domain), IPR011511 (Variant SH3)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57148.1" /db_xref="InterPro:IPR001452" /db_xref="InterPro:IPR008957" /db_xref="InterPro:IPR011511" /db_xref="PFAM:PF07653" /db_xref="WormBase:CBN05905" /db_xref="WormBase:WBGene00144630" /translation="MAPSTSSALPPTTSYSNHLGPAPSTSSLLTASDTVLLQLRAKPH HRVFRALFQYLPMRDSPNDNPQCELTLAPGDICLVKGEMDSDGFYEGEMLDGRHGLLP SNYIERIPDSVLLNNARAPSPSFPMRIPQHLSTIQHDFSSPDHSTLPDSVCPYPPTDV TKVTVQEIKNNETPRIPCPRELIVEKKLSRSALVSWGAPEESYVAVSQYHVCVDGNVK AIIPGSYKLRALIEDIPLELSTNLSVRAVTEHGHSPDACCTISLGNEAQVAPQQVRVW AITPVSACVRWYPSDSNAEHIVSLNAVKVGVCPPTVFQVQLQGLQPSTIYRVSVRTKH PKAVLEQRPVERCLDFKTLPKIGLPDPPTHVQVEIGPQPGTLLVSWHPVTNQPKPPSR AAVSSYLVYADGKNIAQVPNATADHVVIRLSDLSDDPPIFITVRTKTKEGAVSSDSNV ARVPRTQPTGLPPSVPPQQLITAGTAIDPASGLPLMDMTSSYPSYQLGQQAVTNSMYM PLGSGGTLTNAGVPPMTNGHVTTGFTSAPSTAPARMVGATGLMSYQQTSYPNVQAMQQ SAPTSAPNMPSGYATFDRSASLGAQPSSILLSGAAPRPSSVGQTQPAWQKQTSAPMSQ YYTFHPNFLHTEPSGADEPRPSVLEMENSYLMRHRQAADWTSAPESRDARARVEAYSR GLARAGSADERTRYGLGGSVQVGGPLQRVQPAPPSVQRLIAPRLARVKSESGFGTRSE PDLRPPTLDSDEGRWFVSLFDYTTEMSPNPNAEQVELQFRKFQLMKVYGPCDDDGFYT AQIGDRVGLVPSNMIIEVHTDDVGKRRSTGAPAPPPPTQPEPALRRQRWGSLKSRSYD YAGENRGTQPRPHHPNYISLDRRDDRDRDRDRDGRYRRQGAMSSYEHRRLPEREEISF PRIPRRGLSARDDGYDDEGYRERRDPRDLRDRERERDRMDRYDRDPRDLRDPRDRDPR DRDPRDRMDRSLDARRLPLDRRTQDDRYPPYEPSYRGDKYRERPRMDDPQGLGPSQNN YDYPPSSRYDSQQPGPSNQQQQQQQMSQMTHQMGQMHMSQTHQGQMGQAQLPQPPVGI PSSSGIGGMGGGGMQMGGAGDYGGMSNGVGPGGQKMARMVAKFDYDSRQLSPNVDAEQ VELSFRQGDVIIVYGEMDEDGFFMGELNGCRGLVPSNFLQPTPLTNLLPSQPTEPMRK GVAFSDTQMIRKAAPIRQTSQTGAQPGPSMASAVAAAASGGAAKPVAKKSTAGAGAAA GKPLAKKTSDVGKSAAPNARKTSTAVKKADTGAKKKG" gene <115805..>116771 /locus_tag="CAEBREN_25483" /db_xref="WormBase:WBGene00164208" mRNA join(<115805..115864,115911..116387,116448..>116771) /locus_tag="CAEBREN_25483" /product="hypothetical protein" /db_xref="WormBase:CBN25483" /db_xref="WormBase:WBGene00164208" CDS join(115805..115864,115911..116387,116448..116771) /locus_tag="CAEBREN_25483" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57085.1" /db_xref="WormBase:CBN25483" /db_xref="WormBase:WBGene00164208" /translation="MQQQQRPMNGEVQRGGNNYKVPPNPMTVQRVIVQKQNQGQRLVQ RPNPSVPQQREITVREVFTPQNGWKPSFNRPGTQVQQAARVSRVSLPAPTGVMYVERS NNQSSSSRPVNLHVTPTPNQRNILRQQQLIQHAQPQNNQLIRNGAAQYQKVTIEPPRV QQFQQPQQQRQVKSPNSQMNQQRPVSNQITRIQTKTPFSRKRSAPTPPTPESVENFAY SPSGAAPSSKRAKESTDWQQSSGMTDQQSTIQPAVNKDGSLPDYVRHIAGFEIRVIRS KDPDMRLFPC" gene <119353..>121236 /locus_tag="CAEBREN_15040" /db_xref="WormBase:WBGene00153765" mRNA join(<119353..119394,119442..119691,119743..119870, 119915..120056,120283..120859,120906..>121236) /locus_tag="CAEBREN_15040" /product="hypothetical protein" /db_xref="WormBase:CBN15040" /db_xref="WormBase:WBGene00153765" CDS join(119353..119394,119442..119691,119743..119870, 119915..120056,120283..120859,120906..121236) /locus_tag="CAEBREN_15040" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57138.1" /db_xref="WormBase:CBN15040" /db_xref="WormBase:WBGene00153765" /translation="MTDTAEKEGMRKVKTIRGIGLPAGTDYPNIEEIPAEPCKDVYWR KEVANSFEVANNGYSFYRIENSIFAKDLSGYWYRLNNETKCFEFLFEGFKDSTDYTRV SLPPQPPTFVGFNSFHQAVFPMNEDGRPILPKDDKGKTIFPFYEGYPLFPVDDSGAVC VPLGDDGKPVFPRIVEEFGAYVPCDVTGRVVLPLDEQGEPIYPRDEEGNVLMPHIIDE HGFPKRAVYVADDGTPILPFHNGEHAIEVHEGEVLFQHEYQHKMMLLAQFPGQKREQV QLMDEQFYQQHAQQYQMNTSASMDVSPGRSPKLEENGGRNTPTTKNTAQNLLLKQLTF LKKKQETPAVVEKPVKPVVPSERPAKPNKEKEKEKRFIPEPIRRDKFNFRDNRNPGPS SHYSRDRIRDRPSSQHRTRSRSLTWSPERKRGSNDRRRSSPRRRREDEGDRRKSSRKE EKSRRKRSSSRSSGSSSANTDYDDDRREKRYRKSEKFRR" gene <121471..>123997 /locus_tag="CAEBREN_20911" /db_xref="WormBase:WBGene00159636" mRNA join(<121471..121557,121606..121673,121723..121819, 121863..122004,122049..122408,122630..123015, 123366..123681,123729..>123997) /locus_tag="CAEBREN_20911" /product="hypothetical protein" /db_xref="WormBase:CBN20911" /db_xref="WormBase:WBGene00159636" CDS join(121471..121557,121606..121673,121723..121819, 121863..122004,122049..122408,122630..123015, 123366..123681,123729..123997) /locus_tag="CAEBREN_20911" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57161.1" /db_xref="WormBase:CBN20911" /db_xref="WormBase:WBGene00159636" /translation="MTRGIVVTNGTPTEGMVFHMALLFDHSYHSVRDFTMMPVQLKIK EKMRPGKRLGTHETVLTEDTLIYGDVLEWPSKDARGRPIEFVREYRKVREVYQTRLFD GEPQILLQGIMSKNRKVLWMVDIWPDLEIPHRIQQMAHPNVTVNAWVILKIRENQTLK YELHSFKETADSFQFLVRKAKWNEGQLGNLSVLYDPVDEKPQNQEYQSTLADTLTGMH GIVISKKIVLDTSHPGYCFHRIVIRDGDNYPENGKTIRFNAERLEFLNIYAIKDLFVV TNEKQMPLTPNGRVKVTISPATTLHGFYYCKTLNCYVDDPDNILEVWLLSEYSKSALQ VGITATEPSTKGTPRFVVAEITDKKLAKLNAFKAEGKMILTDESGIAPNNFRFPVRPG NYTYRDVWIAINDCHPGEIIKPQLKFKYVAVAELEMIQADALRICPKVVVVSNVPDYP DSLSGVDDSFIEAESVMNNVDVPPVFAAMPDEEFEKELKTRGGSVEKMMEELERNPRW HSDPKQLIGRQIEDHLRSCEACADRKFSADCFFAEYLSRVIDKNMGIMEVLKQDIISI LLARRFRN" gene <128951..>129686 /locus_tag="CAEBREN_11309" /db_xref="WormBase:WBGene00150034" mRNA join(<128951..129141,129194..129304,129551..>129686) /locus_tag="CAEBREN_11309" /product="hypothetical protein" /db_xref="WormBase:CBN11309" /db_xref="WormBase:WBGene00150034" CDS join(128951..129141,129194..129304,129551..129686) /locus_tag="CAEBREN_11309" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57160.1" /db_xref="WormBase:CBN11309" /db_xref="WormBase:WBGene00150034" /translation="MTETDHDHYHITDRPLDDYQYLFAIRFFKYIHKNFNTPTPRRDV LQAYLKDTDMMKPPGSRHLLSNIVLQNMVKVTVRIRETHPTVVFVMSIPMDDWIGYNM TVTCKSGLLKKDEHNRMIQYESLDGQCKLLGNHDFIDGVILLA" gene complement(<130182..>132235) /locus_tag="CAEBREN_24184" /db_xref="WormBase:WBGene00162909" mRNA complement(join(<130182..130599,130746..131085, 131462..131821,131867..132107,132161..>132235)) /locus_tag="CAEBREN_24184" /product="hypothetical protein" /db_xref="WormBase:CBN24184" /db_xref="WormBase:WBGene00162909" CDS complement(join(130182..130599,130746..131085, 131462..131821,131867..132107,132161..132235)) /locus_tag="CAEBREN_24184" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57101.1" /db_xref="WormBase:CBN24184" /db_xref="WormBase:WBGene00162909" /translation="MTRGIVITNGNAANTKVLVFETGYQSIRDFQVLPVQQKPKDALN YGDSLEFSIPRGGQVVREYRKVRKVYETCLFDGEPQILLQGIMSPDRKVLWMCNIWPD LEIPFRLHQMAHPNVTVNAWVILKIRENQTLKYELHSFKETADSFQSLARKAKWNEGQ LGNLSVLYDPVEEKSQNKEYQSTLADTLTGMHGIVISKKIALVTSHPGYCFHRVVIRD GDNYPENGTTIRFNAEKLEFLNIYALKNFSVVSTQKQMPLSPNGRVKVTINYQEGLHG FYYCKTLNCFVDDPDNLLEAWLLSEYRKSALQIGITATEPSTRGTPRFVVAEITDKKL AKLTAILGEQRKDFPPGTRVLFSAINENNSWKITAIRENQKESSVEAVKIQKTIWFHV PEASGCDELSFAISTDLFGLVQSATHSRTPLRPAKHKYRNLWIAINDCHPGEIIKPQL KFKYMAMGDVGTIKGMAEPVGDKIVLE" gene complement(<133411..>135330) /locus_tag="CAEBREN_22861" /db_xref="WormBase:WBGene00161586" mRNA complement(join(<133411..133701,133892..134020, 134069..134249,134460..134634,134935..135236, 135287..>135330)) /locus_tag="CAEBREN_22861" /product="hypothetical protein" /db_xref="WormBase:CBN22861" /db_xref="WormBase:WBGene00161586" CDS complement(join(133411..133701,133892..134020, 134069..134249,134460..134634,134935..135236, 135287..135330)) /locus_tag="CAEBREN_22861" /note="contains similarity to Pfam domain PF01734; contains similarity to Interpro domain IPR002641 (Patatin/Phospholipase A2-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57162.1" /db_xref="InterPro:IPR002641" /db_xref="PFAM:PF01734" /db_xref="WormBase:CBN22861" /db_xref="WormBase:WBGene00161586" /translation="MTDTNEIGETKRYPELNPETLGDYSEKNFNEISNNFLIAFGDYS NFPVEEEDRKSAGSNDEGSEKSLTSSSDSSVSISNKEIDEKLQKEEWENERKKRQVPL RRARDPANRTPLKDASSVCLSFGGCGFLGSYQFGAAKMFYDHGKELLKRVDRYSGCSS GSLISTILIFAPEKITEAVEEIYKMADEVNNTALGAMSPGFVIGDRLRKVVERFVPDD ISKANGLLFVSVTRLKTWKNELISNFTSKSDLIDCLMASCYHPMYSSGLSGKAPILRG EPYIDGGYSNILPEFLDKRTVSVTAFAGDADVCPAEKSALFNDWMFAFFNQNMKVTFS NMKRVSNALFPPPRGMLQQYFEAGAKDAEKLLKEAGMYE" gene <137482..>142118 /gene="Cbn-clp-4" /locus_tag="CAEBREN_23923" /db_xref="WormBase:WBGene00162648" mRNA join(<137482..137536,139338..139469,139517..140347, 140454..140776,141136..141557,141698..>142118) /gene="Cbn-clp-4" /locus_tag="CAEBREN_23923" /product="CBN-CLP-4 protein" /db_xref="WormBase:WBGene00162648" CDS join(137482..137536,139338..139469,139517..140347, 140454..140776,141136..141557,141698..142118) /gene="Cbn-clp-4" /locus_tag="CAEBREN_23923" /note="contains similarity to Pfam domain PF00648; contains similarity to Interpro domains IPR001300 (Peptidase C2, calpain, catalytic domain), IPR000169 (Peptidase, cysteine peptidase active site), IPR022684 (Peptidase C2, calpain family), IPR022683 (Peptidase C2, calpain, domain III)" /codon_start=1 /product="CBN-CLP-4 protein" /protein_id="EGT57130.1" /db_xref="InterPro:IPR000169" /db_xref="InterPro:IPR001300" /db_xref="InterPro:IPR022683" /db_xref="InterPro:IPR022684" /db_xref="PFAM:PF00648" /db_xref="WormBase:CBN23923" /db_xref="WormBase:WBGene00162648" /translation="MANHAKLVDQEIYRNPVDDFELNYQEYLKDDDDDAVTPDGKEIA VSKAPKTRTSHGLGCRMKGLFDGFGGSDIKNIMRHMRRRHPCNGQALTNFMLSGKMEK VVDQHVRDFVHHFGRINPDNGRIMGAIRGNDFFNFGGLHNNLGNTGKVYLDKMISGKC GKRKVHKFRPIIQELDFGGEGAKPTPGGATKPVTPAAPKPATPKPVAPIPSPAKPSPV KPTSPDEHVYPEAKASDFGLDFETERERCLRNKTLFEDPEFPATNASLYYRTPPRDRI IWKRPGEIIANPQLITQGESRFDVKQGALGDCWLLAALANITLYDALFYRIVPPNQSF TENYAGIFHFQFWHYGKWVDVVVDDRLPTVNNKLYYLHSADNTEFWSALVEKAYAKLH GGYENLDGGTTAEALEDFTGGLTEYFDLRKSDKATVLAALVKGMEMGSLFGCSIDADA NIKEAQLRNGLVCGHAYSITAIHNVTYYGQDLTLMRLRNPWGNEKEWNGAWSDSSSEW SKIDAATKKQIDVQFARDGEFWMSFEDFFANFTQMEACNLTAEIFDEIAEMTGVSRAK ETNPEEEHQWNEVMEDGEWSSKKGTAGGCNNNPSTYPKNPQFATYFTAPENSIEADGN VTVIVAVLQKYRRELRSKGKDLLPIGVSIYSLGTGSTRTPLTSEFFSRNRPIARTTVF VNTREVTVRFRVPPGEYVIVPCTFDAYDDAEFLLRCYANGKLRSK" gene complement(<143750..>145365) /locus_tag="CAEBREN_13782" /db_xref="WormBase:WBGene00152507" mRNA complement(join(<143750..144295,144348..144408, 144874..145087,145296..>145365)) /locus_tag="CAEBREN_13782" /product="hypothetical protein" /db_xref="WormBase:CBN13782" /db_xref="WormBase:WBGene00152507" CDS complement(join(143750..144295,144348..144408, 144874..145087,145296..145365)) /locus_tag="CAEBREN_13782" /note="contains similarity to Pfam domains; contains similarity to Interpro domain IPR002921 (Lipase, class 3)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57083.1" /db_xref="InterPro:IPR002921" /db_xref="WormBase:CBN13782" /db_xref="WormBase:WBGene00152507" /translation="MRRVVALLLLLGAVSVAGAPTNHATFSDAFVRKYFPTIFASTEA PNAANCLDKVFKNYELKKHINVKCDETDGLDTCSGLTFVSHDDKAIVIAFRGTKGKLQ LLVESEEIMYRNKTAWYGGGNVGSYFAHAFNLIWNDGMKTDLNLLIHKYPTYEIWVGG HSLGGSMAALAANFLISNGLATSSNLKMITFGEPRTGDKEFADIHDSLVPYSYRVIHK KDIVPHIPLNGMEGFHHHRSEIWYNNEMATADFKECDAQESPFCSDSHLDYMIADHHR YYGMFMSFYGRRNCTGDPAN" gene complement(<146916..>149942) /locus_tag="CAEBREN_00279" /db_xref="WormBase:WBGene00139004" mRNA complement(join(<146916..147203,147874..147987, 148105..148230,148408..148554,148737..148810, 149281..149366,149854..>149942)) /locus_tag="CAEBREN_00279" /product="hypothetical protein" /db_xref="WormBase:CBN00279" /db_xref="WormBase:WBGene00139004" CDS complement(join(146916..147203,147874..147987, 148105..148230,148408..148554,148737..148810, 149281..149366,149854..149942)) /locus_tag="CAEBREN_00279" /note="contains similarity to Interpro domain IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57091.1" /db_xref="InterPro:IPR002213" /db_xref="WormBase:CBN00279" /db_xref="WormBase:WBGene00139004" /translation="MKKEKNPNTFSLIVTEGKTKVGVDVGKMLNEYGGKVHMYRVCNE NNKDTCGYWEDYIVVGSLKDDDHAEWDVWGDGKTSSTTIVGLNVSIPFPQMATYRRVV WNAKGKEEEHLYRVCNGKNKKICGFWENVKTKKKVPSGPTTYNKKNKKLVIKNIRATD QATYYTGNKKKKFEGVKRIQPEKSKKKAFKENKIDGTLLNIILRASSSKNMPVGLDVS IKFPPMATYRREVRNARGKADEHLYRVCNGKNKKTCGFWENVKTKKKVPSGPTSYNKK KKELVIKKIRLTDQAIYYTGNKKKKFEVFVM" gene complement(<150936..>151513) /locus_tag="CAEBREN_09944" /db_xref="WormBase:WBGene00148669" mRNA complement(join(<150936..151112,151157..151303, 151349..>151513)) /locus_tag="CAEBREN_09944" /product="hypothetical protein" /db_xref="WormBase:CBN09944" /db_xref="WormBase:WBGene00148669" CDS complement(join(150936..151112,151157..151303, 151349..151513)) /locus_tag="CAEBREN_09944" /note="contains similarity to Interpro domain IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57136.1" /db_xref="InterPro:IPR002213" /db_xref="WormBase:CBN09944" /db_xref="WormBase:WBGene00148669" /translation="MRKLTILLFLVAYFSTACYAEEEEEGEETSPVGSGARVVYKKSN RNNGVPGIQVNAGTQLSIPLPKATTYRRIVKNAEGKEIEHLYRVCNKKNKTTCGYWEN TKTKKKVASGETTFAGRAVTINGATTYFKKKELIISNILKTDSGKYMTGDKKHSYNVK VN" gene complement(<151791..>152348) /locus_tag="CAEBREN_20693" /db_xref="WormBase:WBGene00159418" mRNA complement(join(<151791..151925,152025..152171, 152217..>152348)) /locus_tag="CAEBREN_20693" /product="hypothetical protein" /db_xref="WormBase:CBN20693" /db_xref="WormBase:WBGene00159418" CDS complement(join(151791..151925,152025..152171, 152217..152348)) /locus_tag="CAEBREN_20693" /note="contains similarity to Interpro domain IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57131.1" /db_xref="InterPro:IPR002213" /db_xref="WormBase:CBN20693" /db_xref="WormBase:WBGene00159418" /translation="MRKLAVFLFLVAFFSATCFAEEEEEEESPSTGSGGNGVSGIQVD AGTQLTIPLPQATTYRRIVKNAKGKEIEHLYRVCNGKNKKTCGYWENVKTKKKVASGK TNFANKALTINNIRKTDSGKYMTGNKKHSYNVKVN" gene complement(<153054..>153581) /locus_tag="CAEBREN_16461" /db_xref="WormBase:WBGene00155186" mRNA complement(join(<153054..153197,153258..153404, 153483..>153581)) /locus_tag="CAEBREN_16461" /product="hypothetical protein" /db_xref="WormBase:CBN16461" /db_xref="WormBase:WBGene00155186" CDS complement(join(153054..153197,153258..153404, 153483..153581)) /locus_tag="CAEBREN_16461" /note="contains similarity to Interpro domain IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57090.1" /db_xref="InterPro:IPR002213" /db_xref="WormBase:CBN16461" /db_xref="WormBase:WBGene00155186" /translation="MKKLIILMALTAHFSQLSDASSMPVEITGMGVFEGETVSMLLPQ TATYRRTVKNAKRKEIEHLYRVCNGKNKKTCGYWENTNTKKKVASGTTTYNKNKHQLI IKKVKKTDAGVYTTGNKMNAFEVYVFA" gene <154064..>155262 /locus_tag="CAEBREN_09203" /db_xref="WormBase:WBGene00147928" mRNA join(<154064..154088,154133..154200,154244..154326, 154376..154484,155116..>155262) /locus_tag="CAEBREN_09203" /product="hypothetical protein" /db_xref="WormBase:CBN09203" /db_xref="WormBase:WBGene00147928" CDS join(154064..154088,154133..154200,154244..154326, 154376..154484,155116..155262) /locus_tag="CAEBREN_09203" /note="contains similarity to Pfam domain PF04909; contains similarity to Interpro domain IPR006992 (Amidohydrolase 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57134.1" /db_xref="InterPro:IPR006992" /db_xref="PFAM:PF04909" /db_xref="WormBase:CBN09203" /db_xref="WormBase:WBGene00147928" /translation="MPICEFTPTSKTRKIDVHAHVLPKNIPDFQEKFGYPGFVRLDHK EDGTTHMIKDGKLFRVVEPNCFDTEARIADMDRANVNVQCLSTVPVMFSYWAKPADTE IVARFVNDDLLAECQKYPDRLVPLGTLPMNDVERAIQVSSV" gene complement(<155406..>163831) /locus_tag="CAEBREN_30881" /db_xref="WormBase:WBGene00192846" mRNA complement(join(<155406..155523,155583..155669, 155721..156040,156089..156219,156878..156989, 157035..157152,157689..157791,162211..162484, 162532..162624,162669..162777,163776..>163831)) /locus_tag="CAEBREN_30881" /product="hypothetical protein" /db_xref="WormBase:CBN30881" /db_xref="WormBase:WBGene00192846" CDS complement(join(155406..155523,155583..155669, 155721..156040,156089..156219,156878..156989, 157035..157152,157689..157791,162211..162484, 162532..162624,162669..162777,163776..163831)) /locus_tag="CAEBREN_30881" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR018000 (Neurotransmitter-gated ion-channel, conserved site), IPR006028 (Gamma-aminobutyric acid A receptor), IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding), IPR006029 (Neurotransmitter-gated ion-channel transmembrane domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57109.1" /db_xref="InterPro:IPR006028" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR006202" /db_xref="InterPro:IPR018000" /db_xref="WormBase:CBN30881" /db_xref="WormBase:WBGene00192846" /translation="MHYLQFLLLAVLLLMCQARKSVYRRNSPSLRRLTRNYDWEVDEH GALRPIINPAKVERATKNCANDSFILGTIMSNYNRHKIPGGQVEVSVEVWVQEITTIS DITSDFQLDIYIYETWHDPALNYAFLNPCKYNLSLNSVLLEKLWTPNSCFINSKTADI HKSPFPNIFLMIYANGTVWTNYRLKLQGPCIMDLTKFPFDNVTCSLTFESFNYNTDEV KMDWSENGVQKMRDKMELADYELVDIHKIRNTEEYPAGYWHELTMSFEFKRRAGWYIL QAYLPTYLTICISWISFALGSKAIPARTMLGVNSLLAMTFQFGNIIRNLPRVSYVKAI DVWMLSCMTFVFCSLLELAWVGYLSREEEPTAPKSSPCSQVAPKPIHPPPVQQSANST VIRRQKQPKNEEESALLSLRDNDYGYIPPGFGLNGNLASAMKSFSSSCSCEPTNVVNM MLDEAETIPASTSSSLSRKQRREILAHKIDSVSVFMFPFLFVLFNIAYWQHYLRVN" gene <164217..>168539 /locus_tag="CAEBREN_03221" /db_xref="WormBase:WBGene00141946" mRNA join(<164217..164351,167262..167363,167601..167966, 168366..>168539) /locus_tag="CAEBREN_03221" /product="hypothetical protein" /db_xref="WormBase:CBN03221" /db_xref="WormBase:WBGene00141946" CDS join(164217..164351,167262..167363,167601..167966, 168366..168539) /locus_tag="CAEBREN_03221" /note="contains similarity to Pfam domain PF04909; contains similarity to Interpro domain IPR006992 (Amidohydrolase 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57079.1" /db_xref="InterPro:IPR006992" /db_xref="PFAM:PF04909" /db_xref="WormBase:CBN03221" /db_xref="WormBase:WBGene00141946" /translation="MALFFVKTKKKTEEDCVAGRRKEKGKKNWLKDEFNPSKQKEKAL EEVRRCVSLGMKGFEIGSHVGEKSLDHRDFWPLYKVCEDLSVVLFVHPWDMHMWDGRL QKYWMPWLVGMPSETAQAICSVLMGNILVMFPKLRFCFAHGGGSYPIIRGRVSHGWNV RPDLCATDCQTSPKELDGLLWTDSLVHDPKALELLISTVGKDHIVLGTDYPFPLGELE VGKVVEEYEPFSQSDREDLLWKNAIRMLDIDENTLSNKNF" gene complement(<168711..>169901) /locus_tag="CAEBREN_15393" /db_xref="WormBase:WBGene00154118" mRNA complement(join(<168711..169114,169507..169603, 169650..169727,169776..>169901)) /locus_tag="CAEBREN_15393" /product="hypothetical protein" /db_xref="WormBase:CBN15393" /db_xref="WormBase:WBGene00154118" CDS complement(join(168711..169114,169507..169603, 169650..169727,169776..169901)) /locus_tag="CAEBREN_15393" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57094.1" /db_xref="WormBase:CBN15393" /db_xref="WormBase:WBGene00154118" /translation="MDEELATYKLQLQQVQAALLGDPNNQELLKLKEDLTEIIELQED LQEKDKAESSEKSVVAPQVIHKWTVGERVIAPHPDGKKVFARIDSLTPAGVAITFTST GTKTIVDPADLQLPPENQRKNYAFDNTKSAAGPSTQHGKKEWQAEKERRRQKALKKQQ KQKELDSIKDGEKKSWQKFNTKASAKGLKGMKKINATGSSQDGSSSGDKRGAIVSSRS SQFSFRATRGAMDSLF" gene <172451..>172754 /locus_tag="CAEBREN_18965" /db_xref="WormBase:WBGene00157690" mRNA join(<172451..172565,172714..>172754) /locus_tag="CAEBREN_18965" /product="hypothetical protein" /db_xref="WormBase:CBN18965" /db_xref="WormBase:WBGene00157690" CDS join(172451..172565,172714..172754) /locus_tag="CAEBREN_18965" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57146.1" /db_xref="WormBase:CBN18965" /db_xref="WormBase:WBGene00157690" /translation="MGLHSIKDSNVTELGMRRQSTRKKPSARNGEEKRVETRENPHRR DNDAMTP" gene complement(<177475..>180333) /locus_tag="CAEBREN_16147" /db_xref="WormBase:WBGene00154872" mRNA complement(join(<177475..177612,177994..178054, 178661..178828,178876..179112,179156..179247, 179295..179721,180038..>180333)) /locus_tag="CAEBREN_16147" /product="hypothetical protein" /db_xref="WormBase:CBN16147" /db_xref="WormBase:WBGene00154872" CDS complement(join(177475..177612,177994..178054, 178661..178828,178876..179112,179156..179247, 179295..179721,180038..180333)) /locus_tag="CAEBREN_16147" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57155.1" /db_xref="WormBase:CBN16147" /db_xref="WormBase:WBGene00154872" /translation="MQPKTMDLKAKAYKLLRSHDVKDLVWSFSPKSIVEAEKRKLVIT AKLEDLKTDRMDGNGVSRFTLCTLGQLFSRIMYMLQEKWEETDKDHLVQNHMSYTHLG DPSPGADIIFVATFLPGQNGTDFLHFCIEADSKQKRTIIGNGSSSIAIIRPTVVASTQ TEGDASEEKSPRDDSSRSGPSLPAAQATSSSSAPPSAPTNAELREQPAVAVGNPESAK KSILRRPAVVGVPAAKQRRVVFVEEKETKSFMLVGVSSRHPKSNDELEKMLKAIVKAE NVEFESLPIKKRRSFVLRFSVKTSQECRKVERLIEQQRWHEFFSVVYLCSDAAEPFFW NSMPMTTIIETMFLAQRMVRNPQEDHSLDAQLKNKRFLALSIEDAALKEEVLSGLNDR GKSLFKKDVQPQASKRGLMFGFPLKSGRKDRTNSQAHSLHRFSWKRMSWTRQLATPVR YSLVLSLSLYWKCLGERVDRRE" gene <189832..>206444 /gene="Cbn-cdh-12" /locus_tag="CAEBREN_14950" /db_xref="WormBase:WBGene00153675" mRNA join(<189832..190308,190464..191027,191441..191575, 191624..192721,192876..192992,197072..197368, 197976..198830,199333..199833,200115..200588, 201111..201760,201905..203705,203873..204080, 204618..204764,204813..205575,205977..206129, 206315..>206444) /gene="Cbn-cdh-12" /locus_tag="CAEBREN_14950" /product="CBN-CDH-12 protein" /db_xref="WormBase:WBGene00153675" CDS join(189832..190308,190464..191027,191441..191575, 191624..192721,192876..192992,197072..197368, 197976..198830,199333..199833,200115..200588, 201111..201760,201905..203705,203873..204080, 204618..204764,204813..205575,205977..206129, 206315..206444) /gene="Cbn-cdh-12" /locus_tag="CAEBREN_14950" /note="contains similarity to Pfam domain PF00028; contains similarity to Interpro domains IPR020894 (Cadherin conserved site), IPR002126 (Cadherin)" /codon_start=1 /product="CBN-CDH-12 protein" /protein_id="EGT57092.1" /db_xref="InterPro:IPR002126" /db_xref="InterPro:IPR020894" /db_xref="PFAM:PF00028" /db_xref="WormBase:CBN14950" /db_xref="WormBase:WBGene00153675" /translation="MVIDRSDLSPGSYLVRLSASLSLPVYPSTLKEANLFVTVVCNGY AYPLFTVHIDPTNRFAPQFYHEPYVVPIQKNLPVWTVIDTPVAAIDWDPEESYQLKFW LEDSHKGIDLVEETARPKSKDLISGSGDWSEQQLPTKVQLRVTGLYELPMSLRLIVSD NAKENPRKSTTFINLVEKNGVVHTTRATVPSPQRTTVKVTVPPTTTTVPTTTTTATTT TTLPSTTTITTTTTVAPETTTTYSEDIIDSEVTKTPAELISELKKALQTAITSKKEKD DDVELDFVAFGAKNREMNAIETENSAEIEKFENSEELGNTRFTQCSLRTTVPENSPKG TKVAHLEVMNKRNTTKIRLIDPDGTFTIDEDTDDVVILDSKLVDRELFNTLELVAEIE NADPTVQCTRIRVYVDLDDENDNRPVFENENYFFHVDPKIPPGREIGRFVAQDIDQGS NGQITYHLLTENVPFQVGTIGKKGVLMTMGKLDSEVSSYNLTVEARDHGEELQKSAKV PVEIFVLGAKEGGAKETKLVKKPAAVVEGVKTVQNEVVENPETSGTEENPDEDVEVVT IIEEVVEEEEAPEEVVAERTTTSEVPSGASVERTTTDETSEEVEEEKEDGVVEDTVEE EVTEAAPDEDEEPEGSEASENTETGKSVVKDDSEDAPAAPETLAAPEEPTDDSEPAVD ASTELPRPKPAEDVNNVEESRESKEEEEAPPPPTKAFSFPQTEYTYDAFGMEIRENDI LGKVEAGPNVEFYAIDREVIGLIKINEAGELLAGKNLNRRQDGPLKFGVSATNGFETA RAQVTVLRDANKDVMSAMPRFDRDTYRFSINENQQPEVIGFVRAFHSAISSSESVRLT YSLIAPAHIDDLPFEIHQQSGEVSTSRPLDTEQKKFYRFQVRACLTQTICSTSDVIVE VVDVNDNAPVFMNRKLEATVESDVPPGTKIVKLLAKDADSGNNSMLTFALDSNQDTFS IDPTTGQLTTAQSLTHPLYNILVTVSDNGVPRRSDSAEVTVVVKGTNPSPPAFDQKEY KAVIPSPIRAGQVIGEVHATDPDPGMEGLVTYKLLRADNDDHRKFMINSKTGVISAIT PLTLDDGPIELGVEASDNGKNMKRKVKTTMKIDIIDSKTLKFLPLPTTVYISTEKAVG SVILRVSAVSTENENIKFRALQENSQFVMDGDLLRVATHLIEGESILSIRAETDTVHV DHQLKVIVMSDRDKYPVFPQLTYDFDVSTDGHFPRVVHQFNAKLGAGQLRYTFYPPSP APKGFYLDDKTGELFVTSHFPETSRETTFVVVRAVNMQANKFYSDVGVAITPVSTTNP TLRFQQPTYNFEVYESLAEGEAIGTISVTGAPSNCKFSISPDDSFLGIHQNGTLFLAR SVDAEELEDSLVQEFTVTATAGSETARSRVQVAIRDVNEFQPEFDEDDVEMSIERTDA TPGTKIGRVMAHDKDVSEKNKLIYRIVGGSGRKLVFIQEDGTIIVGDEKIPSDTEEFD LIIEAVDRNGNHDSTHVIVYVDGDTPDSASDERPLFLGQPLVWNVSEGTTESFELRAT GNSVHFKIIGGDPNGHFDIVHLPENNTARLRIVSELDRKRQYTLQIEAREERSQLTSV AEVVVHVVSTRGSAPQFTKDEYSGTIPVDIPVGFPIVTIEAVDMDHDSIEFSLQGDPC DNQFQIDNKGKVSYKVAKEQRTDGNVVCVVVASDGEHSTDTTLRLTVQPGATITQPPT PNHAPTFSAPEYLFTVSQNATELGEVQASDPDNDPIDYSIEPTEYRNLFHVDSNGRIT VQGGVEQPRYSFLVVAEDRGNPIMSSFVNVKVTVVLAEEQMDNEVTMGTKSPGDLGRT ATPAPPFQFTQNVYSWRVQAGLPVGTIVGNIKAIGEKADDIEYTFISGDHLSIDSEGR VAVMKPFEKTVNDVVIATRRGGEILAETRVFVGVEGVVTTSTTLGTTKPTTTPEDISE ETEEPSTEAPPTLATTQTTTSEVPVEPKTRPTLAPTFPSSQPTLKTQRPTQPTLAPLV LPTQAVTARIIPLDVSSSGFSFSSPFYSAFSLEGNYKSGIELEIKPPLSTNSQGAPVQ YSIEDTTSHLPFFLTPDGKLIMFEADREKHGSYLFTILAKSSSNEMARARLNVTILDV NDNYPKFQNHPETLGIARTMYVGSPVYQMKADDMDEMNEITYQIEPKDYFSIDPKEGL IRVNGDLRAAPEYQELKVTAQDSGKPPLKTDALLKIQMFDEPLGIPKLPKDQLETVIT TQMVPGTEIKQFVGGPNVDEKERIIYRLVDSVNGLFEIRNDGFLVLTRRPLDSEANKY HQLNITAENSKGMDWTVLPIFIEGRLSFGVTPSVPTPSSSTSCQFAQKVYRAQVRENA SPHEAVIRVQAGCQNNQQKFRYAFHTQTKEFEIDSQSGQIYTSLPLDRETKSTYLLTV NVIEQNRMMTKRQSDALIEQSASKLSAWQTLVVVTVLDENDNSPTFLHLLSDSTLAAV VDQNANVMTPVIHLQARDLDVTPEILKFNLEGEGAENFHINASNGLVQLATSLEKSHI EHFELQATVSDGKHTVHVPLNIYVLSVDTNVIQLTKETPHSEIDPSGLERKLTEILGM ETKILVAQPFVGDDGKTDFTKSHVFVYSVDNSKPIGRDELKGLLQSHQHELHPLQITQ YSLLTTGNAAAGPQTLLTVILLIVLIALLLFICALIMFCAKRRARNNSNVMEGSYMIN SIGSGPRPYDVENITRVTAQTVLAGRPLPDPQEHRIDIPSDHHTDVALERDDTTREFS NSVRERPSLIQSAIQRQNV" gene <208385..>210271 /gene="Cbn-mboa-6" /locus_tag="CAEBREN_24509" /db_xref="WormBase:WBGene00163234" mRNA join(<208385..208764,209047..209637,209815..>210271) /gene="Cbn-mboa-6" /locus_tag="CAEBREN_24509" /product="CBN-MBOA-6 protein" /db_xref="WormBase:WBGene00163234" CDS join(208385..208764,209047..209637,209815..210271) /gene="Cbn-mboa-6" /locus_tag="CAEBREN_24509" /note="contains similarity to Pfam domain PF03062; contains similarity to Interpro domain IPR004299 (Membrane bound O-acyl transferase, MBOAT)" /codon_start=1 /product="CBN-MBOA-6 protein" /protein_id="EGT57089.1" /db_xref="InterPro:IPR004299" /db_xref="PFAM:PF03062" /db_xref="WormBase:CBN24509" /db_xref="WormBase:WBGene00163234" /translation="MGVIGALSEATSASEDALRLLLSVLAGYPLAVVHRTFFYNKTAQ IQQIFFVTVGIALWYFNCGSSVIHALLSIVAAWLITNFMRGTDASIYAAHIVFLGHLL FGYWHHETDTYDITWTTPFCIMTLRFIGLVMDIYDGAQKPESLKPDQKLTAITDKPSL LEIAAFGLFFQGTLVGPQFTLSKFRSFVGGEWLDAEGKPPKSAFLPSIGRFLAGCTYM VLHQWGQFWIPDAYFNSDAYNNLSFFWRWSWVTLWFRLTMYKYCAMWLITEGASILSG LGHNGKDATGEDRWDGVRDLHIIKWETGHDYNSVVESFNCGTNTFAKNHIHRRLRWLN NKLASHVITLGYLAVWHGYHLGYFLLFGVELGCVQAQNQLYALIKRTPGWSEAISQPI ARPFIWLFGKITISYSMGFAFLMFGLIKTKYWIGPVKSLYFIGFFIYFVFWPILHIVL LRVLPRHPKKPEESSAKSAEAKKEL" gene complement(<210439..>210843) /locus_tag="CAEBREN_22322" /db_xref="WormBase:WBGene00161047" mRNA complement(join(<210439..210537,210583..>210843)) /locus_tag="CAEBREN_22322" /product="hypothetical protein" /db_xref="WormBase:CBN22322" /db_xref="WormBase:WBGene00161047" CDS complement(join(210439..210537,210583..210843)) /locus_tag="CAEBREN_22322" /note="contains similarity to Pfam domain PF05180; contains similarity to Interpro domain IPR007853 (Zinc finger, Zim17-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57086.1" /db_xref="InterPro:IPR007853" /db_xref="PFAM:PF05180" /db_xref="WormBase:CBN22322" /db_xref="WormBase:WBGene00161047" /translation="MLRSTITALYRASRGISQTVPRFSATAIGKQEPQLSLSYTCKVC GTRQGPKTFAKSSYDKGVVIVTCTGCHNHHIIADNIGWFEDFKGKNIEDHLKSKGEAV KRGTTTRNEDGIFEIQK" gene complement(<210992..>211676) /gene="Cbn-rps-22" /locus_tag="CAEBREN_00379" /db_xref="WormBase:WBGene00139104" mRNA complement(join(<210992..211288,211581..>211676)) /gene="Cbn-rps-22" /locus_tag="CAEBREN_00379" /product="CBN-RPS-22 protein" /db_xref="WormBase:WBGene00139104" CDS complement(join(210992..211288,211581..211676)) /gene="Cbn-rps-22" /locus_tag="CAEBREN_00379" /note="contains similarity to Interpro domain IPR000630 (Ribosomal protein S8)" /codon_start=1 /product="CBN-RPS-22 protein" /protein_id="EGT57152.1" /db_xref="InterPro:IPR000630" /db_xref="WormBase:CBN00379" /db_xref="WormBase:WBGene00139104" /translation="MVRMNVLADALNAINNAEKRGKRQVLIRPASKVIVRFLTVMMKH GYIGEFEIVDDHRAGKIVVNLTGRLNKASVISPRLNIRLNDLEKYTNTLLPSRQFGYL ILTTSAGIMDHEEARRKHLGGKILGFFF" gene <212166..>214424 /gene="Cbn-polh-1" /locus_tag="CAEBREN_09917" /db_xref="WormBase:WBGene00148642" mRNA join(<212166..212293,212343..212489,212534..212687, 212740..213729,213777..213965,214269..>214424) /gene="Cbn-polh-1" /locus_tag="CAEBREN_09917" /product="CBN-POLH-1 protein" /db_xref="WormBase:WBGene00148642" CDS join(212166..212293,212343..212489,212534..212687, 212740..213729,213777..213965,214269..214424) /gene="Cbn-polh-1" /locus_tag="CAEBREN_09917" /note="contains similarity to Pfam domains; contains similarity to Interpro domain IPR001126 (DNA-repair protein, UmuC-like)" /codon_start=1 /product="CBN-POLH-1 protein" /protein_id="EGT57167.1" /db_xref="InterPro:IPR001126" /db_xref="WormBase:CBN09917" /db_xref="WormBase:WBGene00148642" /translation="MRRVISLIDMDCFYAQVEQRDNPALWDQPVIVVQHSRQGVEGGI LAVSYEARPFGVKRGMSVADAKLKCPQINVCHVPIGEYADKADIQKYRDASAEVFRVL NNFDTSIIVEKASVDEAFLDLTTYTNERLEELRENGNLEEFTAIEHLPTTFLATGEDV KENDHLREQMLTDFITGSLHSTENILLLIAACTVEAIRDRIHEETQFYCSAGVGNNKM MAKLVCARHKPRQQTLIPWVYVREILRTTPIGDVRGFGGKLGNRVQELLNITLMGEIL EIDYSLLVESFPDQHEYLIAIAQGMCDEPVRPRKESSSIAVSKNFPGKLAIRTIQELR KWLDGLTKELAKRLWTDQNENKRTAENLVYSLLTEEGKPQKTLKINNYHPDVLFGQIW AAIKVLNRSNLANSEQGPWTPPILNISLSASRFQPGIPAATRSIKEFLGEKKRRKWVR QHAVYDENDGRADVIIEEPPPPKTPAASKPSTSTIGSVEYIVIDDSDEETAPPPPPKS TTNIDYITVDGKKISKKVFRNLPPEIKKQYEHRIALEEARLLKAKSDAKNSRKRAGPI KSDVQKTKKPKPLDSFFKKKT" gene <214786..>215823 /locus_tag="CAEBREN_02210" /db_xref="WormBase:WBGene00140935" mRNA join(<214786..214845,215059..215108,215158..215275, 215443..215613,215743..>215823) /locus_tag="CAEBREN_02210" /product="hypothetical protein" /db_xref="WormBase:CBN02210" /db_xref="WormBase:WBGene00140935" CDS join(214786..214845,215059..215108,215158..215275, 215443..215613,215743..215823) /locus_tag="CAEBREN_02210" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57120.1" /db_xref="WormBase:CBN02210" /db_xref="WormBase:WBGene00140935" /translation="MTKPIGWCATWLPLIKVAQAICHFIVIIMFLDGRAQWYVYNAIF IFSFLALFFSFFTILLRFFELTDLHVMSFNFAAMLLNFLLMGICLAFSGLLIWDICNM RYGPSKIRYHERLAPANIGQDAWIRRCVVAATSLLLAGILYLITYLKLRGYAASVNQ" gene complement(<216432..>222082) /gene="Cbn-pqn-41" /locus_tag="CAEBREN_25882" /db_xref="WormBase:WBGene00164607" mRNA complement(join(<216432..216722,216776..217159, 217208..217438,217495..217804,218050..218154, 218543..218979,219267..219798,219845..220506, 221948..>222082)) /gene="Cbn-pqn-41" /locus_tag="CAEBREN_25882" /product="CBN-PQN-41 protein" /db_xref="WormBase:WBGene00164607" CDS complement(join(216432..216722,216776..217159, 217208..217438,217495..217804,218050..218154, 218543..218979,219267..219798,219845..220506, 221948..222082)) /gene="Cbn-pqn-41" /locus_tag="CAEBREN_25882" /codon_start=1 /product="CBN-PQN-41 protein" /protein_id="EGT57158.1" /db_xref="WormBase:CBN25882" /db_xref="WormBase:WBGene00164607" /translation="MAPFPIVRRVLCFSILVPYASLDPPTYSLSLASFPFSSLWGYVM CRDNQLRQRLLDPASSALSSAFHSTRLSSLEERLIELGVEHEVDQNQQRLQLEFETCH QQQQEQLQLQQLQQQQQQQVELQQHQFAHHQNPYHQVGTPQSQESDFATPKIPQQDKQ KRKYTKRKPPIVASSEMKSPGTTSMETAVVAAASQQAQPIHPPLPDGAAGSHAPPPTE AASPVPTTSSNKRSASESPTGSVGQGAKVAKIEDDVIAATSSANAAFFAANPQSIIGI SAQTQAQFQQQQAQQAAAAIAAAGVPTAATTPATSSLYVHTGGAPAAGTTPSAAAPVA TVPSAAAAAATAQGSAAHTEAMRILTAQMTQNGGLPFLGTNVPNTIPYMAALQQQFQQ LTQPPNGTAAVGGSINGIQFPPNAALGPQLAGAALLAAVPGAHQGHGANVKKTGRWSG MHVKIAHDIQAQRGTGEKKVSNAGSQSSTSAAAAAAAAASTTQAPQPPPQQQSTSSTP SASKKSSPKSAAQLAAAEKAATPVIVSSQAAAPAAPSAPPATAQAPASSAAAASQPQP PPASSAPVGNGARHAPATSQPPIQFTQFPPPQLSGGPTYAGNPQLMAAAINEATRRVA ATPKPPAARPPSAAVAVSAAQASNLAAAAAAAQQAQQQQQQRSLIGIATSHHPTAVTQ AQPTAQQIATSMGVPAAQVNELAQQQAALQLLLQQQQQAREQQSLAQQQQHQQQQLFN MLAQAQAQQQQQQQQAQVPASAAATAATQQAQAQAQAQAQAQAQAQAAAQQQQQQLQI QMILSALQQQPHNPFALQIAQQVQQSQPAAQPGQADQIAVLRQIEQQQAALAAQAQAQ AQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAAAVAQQQQQQQLQQLLAAGTAGGQQ DLMRILQAATSQQQQQHHQQQLAAAAAASRQQPNAAAQFDALMQQRLMQAQQQQQQQQ QQPQAQQLQQLLGMQPHFFAAVAQQQAQAQAQAQAQAQAQAQQQQQQKPPQMPNGR" gene complement(<229112..>236985) /locus_tag="CAEBREN_17620" /db_xref="WormBase:WBGene00156345" mRNA complement(join(<229112..229312,231341..231406, 232086..232329,232375..232940,232986..233146, 233194..233452,233500..233706,233750..233956, 234004..234807,235164..235492,235626..236019, 236073..236326,236544..236731,236791..236822, 236882..236929,236977..>236985)) /locus_tag="CAEBREN_17620" /product="hypothetical protein" /db_xref="WormBase:CBN17620" /db_xref="WormBase:WBGene00156345" CDS complement(join(229112..229312,231341..231406, 232086..232329,232375..232940,232986..233146, 233194..233452,233500..233706,233750..233956, 234004..234807,235164..235492,235626..236019, 236073..236326,236544..236731,236791..236822, 236882..236929,236977..236985)) /locus_tag="CAEBREN_17620" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57129.1" /db_xref="WormBase:CBN17620" /db_xref="WormBase:WBGene00156345" /translation="MTPKVKPKNPENNGEPEETDDVETPTKKEKSTPTKKKLERKSKN LQKKKKKYAKKRKEEEVRIFFPPPRINPPLKTPFRLHNTTCQHHGWAWNNLNLPKYAT NQVGWRASYRKMRSIYLIDSRRAEFLTAFNLYSHKRIRKAIVAPNRNGVQKLDRMPRS WNPETENSKFFDETDEEVIPPVKPVKTEEEPAEEAPPNRRKFFQNRIKTVKRMAFLTM FRKKRSKNPRYRRYLRRTRTKHQRMIEFRRPRNGKWLRIRNKERVTIIPRIRILRKNL VHKRECRVDPENLLRWLKRQELDEEKKILKEKEKILREQAEDAEWERYESTRSWDSEV VSNRIVLEVDQLFRHKNEDWIVIEKKGSPIQGYQYMLVPVSEYNGEIKMRYDRQYVDH RFRKMRNENGRRVEFVTSLPIYKPKPPKIHYPTFAGQYEEQERELERRRLEEEERDNR DAQYEMKDRTNFKVLMKRQSLIKRYRQAIQKEVWRRRRRHLKELSDPMSDSDSEDSDY EDDDVDMNPELDSSFYDCEPSTSTAPPPRRIPKPIKSILKPYDTPLLNDVKMEEEDEE VAETKKIKEEVLEASVKIEMNGFPEEIPLKKNGRRRISKKNDVLSDHEDVPVIKKEVI FQHDDVAEPKDNKNKNKKNGKNNKVKKFEINGINHEEDVKEFKTEIDDIKIDVNILTN ETQQISLNYSPVAFKPVNESHNNSPRKVSSSDKPVNHVRFELTKSQQLAALYKPMTWQ IKELIRTVGVGRGYKMRTKRSRYNEKVRLYNIFGGKNRQTKAAPKRLDVFEKGIDIRE EPIPFVEEFILDDHALVAFASYDDLKRFEQAKTLRQEEMIQKFWRTQCLKNIAQFESG FDERKIMQEEIESLENEMKVQKSTENQELDQENKEAFETAGRQVEAIIEKTGDCPFDT LEEYFAISADFQKQEDIRIEEDQIDIETEHWDQELEELISLIKKEFSLVDLMMRYLSN RHLLTMQLVVSGMNQSPIDREDLLLKVRRLLQELESKRMESLERAKRRYDKTEEHLQR FRIHRIRAIKRAKKLVKSLRKSKKNGRKCNGTTATTETIDGDEEQPKKGKRKWRIVLK PFEEKIGNMKKKKKKRKRKRRKKKIRRARRSHLKQGDMPVSRDLRWGFKSFIFRNGMA RRMPSITMNTIRRAVAWGAKIEDLYGETEFEKLLRSYLEQQEKSMAQDVTIEQKMELI MKLKVLTLDEARKRATEKQRKMIDNAVEMMIKSRMQQINTDHRAWLDSAECKLYRVTS ITIIMAAHNDPRWIILANTWIFCLWRLILPFIFNQNIEDGSGIILDLCQNMDVITALF NV" gene <237330..>238391 /locus_tag="CAEBREN_07920" /db_xref="WormBase:WBGene00146645" mRNA join(<237330..237424,237484..237559,237608..237746, 237793..238251,238300..>238391) /locus_tag="CAEBREN_07920" /product="hypothetical protein" /db_xref="WormBase:CBN07920" /db_xref="WormBase:WBGene00146645" CDS join(237330..237424,237484..237559,237608..237746, 237793..238251,238300..238391) /locus_tag="CAEBREN_07920" /note="contains similarity to Interpro domain IPR018247 (EF-Hand 1, calcium-binding site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57082.1" /db_xref="InterPro:IPR018247" /db_xref="WormBase:CBN07920" /db_xref="WormBase:WBGene00146645" /translation="MPPESVKTARIRGSKARNESGSVSPSALSDPGRGKMIFAEKMRN MYGNQDPKELEIKIEQLWNGLTPLQREKFIGVSGEKENVKVKSEVPNAKPVVPILERR NNCKAIAKVLDLKVTKPMTPYADLVKNRISSVWKEGSVDNFRQAKISPLSLLTCSTTV QTPPPSPPNDTEFDDKNMTNDMTKTEVVKPKDTPKKATFKMPSLNLSAPPKKGTFKTV TRKFVVKKVQKPIGPRISYEKACQEYYKALSQSFLVDNYATDTTMLPIYADIIEGCQP IREYTFGGLL" gene complement(<238762..>240465) /locus_tag="CAEBREN_18861" /db_xref="WormBase:WBGene00157586" mRNA complement(join(<238762..239007,239232..239405, 239713..239757,239833..>240465)) /locus_tag="CAEBREN_18861" /product="hypothetical protein" /db_xref="WormBase:CBN18861" /db_xref="WormBase:WBGene00157586" CDS complement(join(238762..239007,239232..239405, 239713..239757,239833..240465)) /locus_tag="CAEBREN_18861" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57100.1" /db_xref="WormBase:CBN18861" /db_xref="WormBase:WBGene00157586" /translation="MLYTEHLELVAENGPRSKCQLKEDCGTPTLEIFDSDSTFTSVDL SSSTTIVNGILSLITTLLYILALLKLLCFKNPSVTHFREISKPIFVLAATVILRNLFF ISSFIYLSNCRCPWKVYMVNQLLFVTEFSSHYLAILLIFLMALNRYLFFCKRFYYKYF NTGTKLVLWFILCIFVSIASTITGIMSSKVELAYHYEVGFVAAGHSGGFQNDRFLRNH SFFQNRAIIINRLYITFPVLSIVCFIFIFLRIKKNAALISTATSRNQNNGTEKVFEQI LVIALFYLCSYSIQEVVISNEIFYYSNPHQLLYINLFTFINHLPQFMFPLLLIFRNVP PPKCRIVWFTQNTNIVATSHVVINYNNNNNN" gene complement(<241116..>242424) /locus_tag="CAEBREN_15168" /db_xref="WormBase:WBGene00153893" mRNA complement(join(<241116..241325,242071..242241, 242287..>242424)) /locus_tag="CAEBREN_15168" /product="hypothetical protein" /db_xref="WormBase:CBN15168" /db_xref="WormBase:WBGene00153893" CDS complement(join(241116..241325,242071..242241, 242287..242424)) /locus_tag="CAEBREN_15168" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57088.1" /db_xref="WormBase:CBN15168" /db_xref="WormBase:WBGene00153893" /translation="MVFWISLCFILAISTSVSAIWSSQVQRQYIQDIGFVAVGVRGGL HMLINRLYYLLPFCSIICYFIMFHHFKRVGQQSSNLAVSSQNSGPRKIFVQMITASCY GAMAIFVEFVYFFGLYEWSYEHQLIFINLVTISNYLPEMSFPFLLLLQLIRIPNRIHM MLGSEIRNQNIT" gene complement(<243957..>246024) /gene="Cbn-glb-30" /locus_tag="CAEBREN_20478" /db_xref="WormBase:WBGene00159203" mRNA complement(join(<243957..244268,244508..244646, 245081..245187,245235..245286,245474..245569, 245954..>246024)) /gene="Cbn-glb-30" /locus_tag="CAEBREN_20478" /product="CBN-GLB-30 protein" /db_xref="WormBase:WBGene00159203" CDS complement(join(243957..244268,244508..244646, 245081..245187,245235..245286,245474..245569, 245954..246024)) /gene="Cbn-glb-30" /locus_tag="CAEBREN_20478" /note="contains similarity to Pfam domain PF00042; contains similarity to Interpro domains IPR012292 (Globin), IPR000971 (Globin, subset)" /codon_start=1 /product="CBN-GLB-30 protein" /protein_id="EGT57113.1" /db_xref="InterPro:IPR000971" /db_xref="InterPro:IPR012292" /db_xref="PFAM:PF00042" /db_xref="WormBase:CBN20478" /db_xref="WormBase:WBGene00159203" /translation="MESLSHLTPIDREILNKSWAIVSKDMQQVAVNIFQMIFEQAPDA KLMFSFMMKDYKEDKKSNEFIFHAVRFLQVIESTMTHLDDPSQLDAVFLNLGKIHAKH EEQLGFRFSKHKEMSFAEIDSAIILWREVLRFIIDRMKVGYSESGAIRKSNKQAINGQ HSISAEDSGLSSGLSVETKQDLTQVKILSTPSKIYKHASPNRMASRHSVAVIRTNGTA TTTDATPTSTTCNILKTLASISPKCVRRRLSLSPAPRSHV" gene <246523..>246588 /locus_tag="CAEBREN_13170" /db_xref="WormBase:WBGene00151895" mRNA <246523..>246588 /locus_tag="CAEBREN_13170" /product="hypothetical protein" /db_xref="WormBase:CBN13170" /db_xref="WormBase:WBGene00151895" CDS 246523..246588 /locus_tag="CAEBREN_13170" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57078.1" /db_xref="WormBase:CBN13170" /db_xref="WormBase:WBGene00151895" /translation="MNLGIGIERGRKGDGEMKNWI" assembly_gap 248270..248279 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 249732..249741 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<251685..>253212) /locus_tag="CAEBREN_00619" /db_xref="WormBase:WBGene00139344" mRNA complement(join(<251685..251836,252124..252530, 252584..252846,253129..>253212)) /locus_tag="CAEBREN_00619" /product="hypothetical protein" /db_xref="WormBase:CBN00619" /db_xref="WormBase:WBGene00139344" CDS complement(join(251685..251836,252124..252530, 252584..252846,253129..253212)) /locus_tag="CAEBREN_00619" /note="contains similarity to Pfam domain PF03770; contains similarity to Interpro domain IPR005522 (Inositol polyphosphate kinase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57165.1" /db_xref="InterPro:IPR005522" /db_xref="PFAM:PF03770" /db_xref="WormBase:CBN00619" /db_xref="WormBase:WBGene00139344" /translation="MVLNIKRASSLDGATVNVQDILKPFDHQVGGHTPFTSLAHGHLL KPCDEREIYFYQKMPKILKKIAPLCCSTIQGSSVSTFDDSCHNCRQHHQLENVIIPES IEGSPILNKRKLSKNFIVLSDLTYRMKSPRILDLKLGTRQHGDQATMAKIACMTAKCQ STTSASLGIRLCGMKCPPCDSKNQMAINKYEGRAMDKLELFMALQQFFDVPEMVLELV QRKLIAIRDVLNEADGVRLFGASLLIVIESEPSESTPIDNLVRIKVVDFANSTFNGFQ GDNFYEGRDEGSILGLETLLGIVQA" gene complement(<268801..>272523) /locus_tag="CAEBREN_19463" /db_xref="WormBase:WBGene00158188" mRNA complement(join(<268801..268917,268961..269050, 269098..270639,270685..270914,271120..271649, 272270..>272523)) /locus_tag="CAEBREN_19463" /product="hypothetical protein" /db_xref="WormBase:CBN19463" /db_xref="WormBase:WBGene00158188" CDS complement(join(268801..268917,268961..269050, 269098..270639,270685..270914,271120..271649, 272270..272523)) /locus_tag="CAEBREN_19463" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR008616 (Fibronectin-binding A, N-terminal), IPR008532 (Protein of unknown function DUF814), IPR021846 (Protein of unknown function DUF3441)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57102.1" /db_xref="InterPro:IPR008532" /db_xref="InterPro:IPR008616" /db_xref="InterPro:IPR021846" /db_xref="WormBase:CBN19463" /db_xref="WormBase:WBGene00158188" /translation="MKNRFTLVDVIAATTELKKLQGMRVNNVYDIDNKTYLIKLSRTD EKAVILFESGVRLHQTFHDWPKSQTPSSFSMKLRKHINQKRLTSIRVVGFDRLVELVF GTEDRENRLYVELYDRGNVVLTDHELTILNILRVRTDKDTSVRWAVREKYTFTEEISE ETANSRHGKFKFEDFAKAVSAIPDGKEEQLGRIVSQFTRCGNPVTKEILCKCGLKAEQ KISNKSDLSGITEKFEDILKATEEIWEMVEENPKGVISYTEVPSPTSAPIQLYQEFNP IPMPLTSKFTKELPSFCESVDEFYSRIETQKQEQKAINMEKQALKKLENVEKDQKDRI EALQMTQEQREHMANRIILNQELVEKALLLIRSALANQFSWQTIEEMKKTAAKNGDPV AKSIDSFKFESNEFVMTLGDPYDDEAEILKVPIDISMNASKNAQRHFVDKKSAAEKVK KTVASSEKAIKNAQEKAKSTLEQVKIVTEVKKSRKAMWFEKFRWFISSEGYIVVAGRD AQQNELLVKKYLRPNDIYMHADVRGASSVVIRNKSFEESQEIPPKTLTEAAQMAVCYS NAWEATVTASAWWVRPEQVSRTAPTGEYLPSGSFMIRGKKNFMPPSQLVMGLGVLFRM DEESIERHVAIEKEKKKDEEKLEEKQQENERKSPEKPEETTVETDDADVEFPDVQVKI AQTEEEEVYLIEVGPKNPPSKQQQQNQKAAPEKMTQKYLEDKDKDQMAGPSAKTQKRK QRKEKMVKQKYKDQTDDDLELHKELLKPHGKVVEEKPEQPKFEPRPPKEETKKEENRP QKSEKTGQEEEPEDVEEEDKEAAAEEQSLLTTLTAQPLDEDTLLFAVPVVAPYSALST YKYRVKITPGIGKRGKATKSAIELFTRQRTDRQAALIKSLLSDDSASRNLPTKVRISA PQLHAK" gene complement(<273035..>274946) /locus_tag="CAEBREN_20610" /db_xref="WormBase:WBGene00159335" mRNA complement(join(<273035..273199,273553..273790, 273844..273942,273990..274292,274339..274781, 274827..>274946)) /locus_tag="CAEBREN_20610" /product="hypothetical protein" /db_xref="WormBase:CBN20610" /db_xref="WormBase:WBGene00159335" CDS complement(join(273035..273199,273553..273790, 273844..273942,273990..274292,274339..274781, 274827..274946)) /locus_tag="CAEBREN_20610" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57118.1" /db_xref="WormBase:CBN20610" /db_xref="WormBase:WBGene00159335" /translation="MDFYSARITEVEAQLLAKQIEKFTISSLRNDEVIGLQNGRNLAD FPPEVLCNIFSFVGSKSTNPAPTDNFMEYLRARDPNDYQNRSWPQAQRDPPGKLDWTA KTRDEYAVRNLMSLRRVCSKFEDIINNQMVPGIDFDFLMIDVKIQGNQETPRAVVVFK YGGDGSRYPATHLRRIRRYNEIDFEHIQKFERIRNLYITDMVLTEELFETILRLDLTK ATTITFERVLDVNFNENINIVNYIQNFLNTLNSPANVFFNSNVFNPNVVLFGLDENNM EVIEDEATNAQIRDLEENMKRHKMYRAGYKNRTNFAEFRRYRAFNVVNNILHSKQYIS SGIPEKKSEVKMIKKQLKMDLDNLTKNRGSELKKAGKWHLRKVFELLEKQPATGRKKL LYHLKMLKKISGECPLISTDEEMSIVRQWNETRHRDHLIQQFPFLAKFQLKSRLYSIT RPYSA" gene <276119..>279232 /locus_tag="CAEBREN_30030" /db_xref="WormBase:WBGene00191995" mRNA join(<276119..276188,276239..276346,276394..278236, 278468..278777,278834..>279232) /locus_tag="CAEBREN_30030" /product="hypothetical protein" /db_xref="WormBase:CBN30030" /db_xref="WormBase:WBGene00191995" CDS join(276119..276188,276239..276346,276394..278236, 278468..278777,278834..279232) /locus_tag="CAEBREN_30030" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57111.1" /db_xref="WormBase:CBN30030" /db_xref="WormBase:WBGene00191995" /translation="MNKDEEEIRCQTMWQLDQDKKYQEVTEHLLTGCLNCITNPKKRF SGQEMLFPNGPPPWIKVPEAEKNNPESWKKYQKKKVHVEMTPEEFERYLIDSDISDGQ MVFEVAKFKRCEKVIAWSTVHKIRKQQKEILLEKEKKEKEMKKKELEAKKESERLKKA DEKRKNDEKKQQKNEEKQEYLDKMREEMKLLDTALEEDAPSEKESESDSEVVPEDRAT KLNNLLQTKSFNLKHQMPWAPSSYDMLYFEQKSKLDQAQQKRIIGMCQNMLYRGSLRH AGNKLEMKDMRQACDSEYEMLVKAALEHARNEAVHPVDLMNQNTKMKCLQAFRNREPD NAHYLFKTPVFTVEDIEMIAGIKSEKQAIIPRMETLLKPASYQDELIIPDISKKCELR LCKRLNEPKVKIHLDQTVLSLITTCSQVSVMMDATTACHLLSPNWEGRDYEFGIPIVV KTERCDGQDRKIVVLSKPMFSNTISSATIQRKTIKRTLKSHFVVRKAAQNPVNISTSS SQTPDDTQIFSDSQDSTKSTDDVPSTSSDFLDNIISKMDKPKKNPKNKETFPNSTFQY AVFRVGDARLLIRSNAPYKHVEAGDRQHEMLQNAKGVTFEPRVEYLPNGGAMELGAVE WMWNYSKAVLKMSDSHILYRTSYKIDHVLQVDATTMRVDLMEPPPDALGLLSARTLML EQMIAQLENLENGEYMAFQSKNKPLVVVSKCDAEQRGGVSIDAMRIKENDIQNISQTI KDDYFHGFSQEVPFQWQIVQGRAPQMLMAADSPLAHLKPSKGNFEKLQRKKFSLKRKF QERAAEKEEAKRQGDIDWDDPNLYADFTNPSVVPLDFRPNYHDTKKKRGKGQFFGRGA GRGGGRGHHRRGGKTAGRGARGGGRGGGSQQSQAPNATGESSSSQNVEVVNIP" gene complement(<279846..>281636) /gene="Cbn-sms-3" /locus_tag="CAEBREN_14516" /db_xref="WormBase:WBGene00153241" mRNA complement(join(<279846..279878,280295..280598, 280649..280872,281083..281336,281384..>281636)) /gene="Cbn-sms-3" /locus_tag="CAEBREN_14516" /product="CBN-SMS-3 protein" /db_xref="WormBase:WBGene00153241" CDS complement(join(279846..279878,280295..280598, 280649..280872,281083..281336,281384..281636)) /gene="Cbn-sms-3" /locus_tag="CAEBREN_14516" /codon_start=1 /product="CBN-SMS-3 protein" /protein_id="EGT57164.1" /db_xref="WormBase:CBN14516" /db_xref="WormBase:WBGene00153241" /translation="MGSGSKGISTVISARGAPETDTDSGRTTGRGSEWAKCIFLFFFL LISGMSNWAVIAYTHDYVPRQPLPDLVFSLVGEQRWASSLGDMCVALCIVILGALLVI HQHRGTVLKRVVFCAATLYAMRSVTLAATQLPSGYTDNQGRCRDQVESKASVFFGRLF EQTIRIGFQSKDQMLCGDLLFSGHTLVMVTCSLAVAYYLPKSIKPLQWIAHISCFIGM ICMIISRTHYTIDVIIAYWLSNMVFRIYHAYCEVDMCMERHKSILYSWWPCRIIDWLE QDIVPGRLDNRCSLPWKRLTTRRRGNGQRERGGANSNEQESSDSSSTTCETTTNTNTN NCHHHQKHVSISSSSTYPLPC" gene complement(<291211..>294653) /locus_tag="CAEBREN_00937" /db_xref="WormBase:WBGene00139662" mRNA complement(join(<291211..291282,292479..292714, 294647..>294653)) /locus_tag="CAEBREN_00937" /product="hypothetical protein" /db_xref="WormBase:CBN00937" /db_xref="WormBase:WBGene00139662" CDS complement(join(291211..291282,292479..292714, 294647..294653)) /locus_tag="CAEBREN_00937" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57122.1" /db_xref="WormBase:CBN00937" /db_xref="WormBase:WBGene00139662" /translation="MLEYPITHPTTSIHYSQILATSSSNSEEDHLNHHHHLQHQHHQK TGKYRLIQNDEEDEETFREGAESATSNTVLLMADTITPKLLKLSLDPSRSVISDPSEI SP" gene 298300..298371 /locus_tag="CAEBREN_26726" /db_xref="WormBase:WBGene00187337" tRNA 298300..298371 /locus_tag="CAEBREN_26726" /product="tRNA-Met" /db_xref="WormBase:CBN26726" /db_xref="WormBase:WBGene00187337" assembly_gap 299659..299668 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(300742..300813) /locus_tag="CAEBREN_27178" /db_xref="WormBase:WBGene00187789" tRNA complement(300742..300813) /locus_tag="CAEBREN_27178" /product="tRNA-Glu" /db_xref="WormBase:CBN27178" /db_xref="WormBase:WBGene00187789" gene <300815..>302252 /locus_tag="CAEBREN_04996" /db_xref="WormBase:WBGene00143721" mRNA join(<300815..300822,301628..301831,301993..302077, 302121..>302252) /locus_tag="CAEBREN_04996" /product="hypothetical protein" /db_xref="WormBase:CBN04996" /db_xref="WormBase:WBGene00143721" CDS join(300815..300822,301628..301831,301993..302077, 302121..302252) /locus_tag="CAEBREN_04996" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57096.1" /db_xref="WormBase:CBN04996" /db_xref="WormBase:WBGene00143721" /translation="MKKTVTCPTHIPPNADLEKEGLDVKLPPGWYRIGTMTIRHDKGW LNLYRRRAIGHGYWDFYTNIPERNCAGTFGLHAGDNISGSVAVKNKDCFDKLIYQIEK KSTIEKIDVYQCRKCIFHSCWLGSRLLPRARDYYTNLRSL" gene complement(<302455..>309308) /locus_tag="CAEBREN_29062" /db_xref="WormBase:WBGene00191027" mRNA complement(join(<302455..302494,302635..302752, 302941..303070,303301..303404,303451..303879, 304144..304435,304470..304678,304727..305171, 305219..305528,306251..306826,307079..307419, 307697..308011,308230..308339,308675..>309308)) /locus_tag="CAEBREN_29062" /product="hypothetical protein" /db_xref="WormBase:CBN29062" /db_xref="WormBase:WBGene00191027" CDS complement(join(302455..302494,302635..302752, 302941..303070,303301..303404,303451..303879, 304144..304435,304470..304678,304727..305171, 305219..305528,306251..306826,307079..307419, 307697..308011,308230..308339,308675..309308)) /locus_tag="CAEBREN_29062" /note="contains similarity to Interpro domain IPR011990 (Tetratricopeptide-like helical)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57107.1" /db_xref="InterPro:IPR011990" /db_xref="WormBase:CBN29062" /db_xref="WormBase:WBGene00191027" /translation="MNETLESVVHEAGSAYSEGRYREARDLYESALLEHPNNGILHAN LSAILLKMNLPEYSLKHSEKAVKLCPQWAKAHYRKGESLKASSRIFDSILAFANGIRL DSTNFQILKSLSDSITVFYGQKFPWENLKLLKLDQDVPTILSTLGQLILSENRPEEAV KILNWSIELDLKSVKLQESVYGALASAYCTMGKYPEALESLRKQLDTALRIDTPSVPK IRENLAQVAEICEDYNVAIEMRTIWGKKNENDLSENLKLCELYLKSGAPEKVLSILDR EPSTKIPVQMMIGKAYMAQGEYQQALRTLIPISRNRENHSFELVDSINKCMVELEDLN SSIEFLNKIIGENQENADLTLHCYSLLCQTQITAGNLETSLKIAKYVLKLAKNLSNLD IHEANAFRLLAIIYEHQKDFGSAVILWKKYVDFDGVLTEEERMKGLIQMARIAQNEMV NEDVGRIFEKAERILERLSRPSEKVMFYSAKYRWLLSIGHISEAKDILKNLESILKNE KTLDSKSKSLVYEDLAMTPENFKKFSKIPERNSKILSLEQSLTEAQDANDMYREARIL EKIGNLFSENPTENDQKLAEKYYNQQLEVGKQLKNAKMMADSHANVAKLKWRSGDYKE VCEHSRCALTIFKLASDNEQKVEMLILLARAEMERNNPEIALSAIEKAINLAEDCESN EKLATSFRLISEIYQKSGESEEISIQFVRRHIDLFEYEKDQMKKWESLRDLLKYEVNR SHGDVGKVENLLRIMTVQVDLKEPQLLEILESLSNTPCFQNLSGKILQFLSEHPENIQ SLDKLLRFCRFDPEILFRISKFATENQEFWVYLTIFAPRIVEKWRKVREPSPIISALL CYQKNDWIAALDHLKFTNNLSQEMRNLLKLLEMNATWNLKTSGKSTKFLDDFSDVETQ TRIFDMFYDRISHQYIKNEIIKFHVEMLNGKFDMMADGIRSIDKIVCAAHLDERELIE MWFYVRLEEYLESFHVSDAFIDKFLRGSSSELLRFAAIFTAISVSEKLKVLEILENCE FAIIQKRLPNYCSMRRVDKMKYAKIEGVYTFEVGSLTVVFDFEQGNDEFKVLWIQNSE SLTLYDHLLQRFLQSYGYQQLHHTLFTNLLIGPKTDRIQAKTHKFWLETSRILGESVE KSIDILKFGEVSDEIKGVQAPEFELKNCELFKIIADKFQDSYGVIVRNMAEFLEFFDI FCMKLKEFPRFLLVIRANIPKLSQETERIFEFVDCEVQFVSSIREAEELIEHHLSKFP MKGCLRTLRYDIKLALEGNYCIPETENPTNFEEILEEFGKPRILQILNWDSLRTSEIN SEVQKIPEKKLRKFCEFLVYSVSSSQIQRM" gene complement(303116..303187) /locus_tag="CAEBREN_26478" /db_xref="WormBase:WBGene00187089" tRNA complement(303116..303187) /locus_tag="CAEBREN_26478" /product="tRNA-Met" /db_xref="WormBase:CBN26478" /db_xref="WormBase:WBGene00187089" assembly_gap 305977..306208 /estimated_length=232 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<309730..>310400) /locus_tag="CAEBREN_14345" /db_xref="WormBase:WBGene00153070" mRNA complement(join(<309730..309795,309971..310090, 310200..310313,310374..>310400)) /locus_tag="CAEBREN_14345" /product="hypothetical protein" /db_xref="WormBase:CBN14345" /db_xref="WormBase:WBGene00153070" CDS complement(join(309730..309795,309971..310090, 310200..310313,310374..310400)) /locus_tag="CAEBREN_14345" /note="contains similarity to Pfam domain PF00166; contains similarity to Interpro domains IPR020818 (Chaperonin Cpn10), IPR001476 (Chaperonin Cpn10, subgroup), IPR018369 (Chaperonin Cpn10, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57084.1" /db_xref="InterPro:IPR001476" /db_xref="InterPro:IPR018369" /db_xref="InterPro:IPR020818" /db_xref="PFAM:PF00166" /db_xref="WormBase:CBN14345" /db_xref="WormBase:WBGene00153070" /translation="MFLTAVRRSSNVLKSFKPLYDRVLVERVAAETKTKGGIMLPEKS QGKVLEATVVSAGLGLRNEKGELVPLTVKPGDRVLLPEYGGTKVIVEDKEYSIFRESD LLGVFQ" gene <311243..>313323 /gene="Cbn-hsp-60" /locus_tag="CAEBREN_03890" /db_xref="WormBase:WBGene00142615" mRNA join(<311243..311389,311506..312207,312423..313118, 313165..>313323) /gene="Cbn-hsp-60" /locus_tag="CAEBREN_03890" /product="CBN-HSP-60 protein" /db_xref="WormBase:WBGene00142615" CDS join(311243..311389,311506..312207,312423..313118, 313165..313323) /gene="Cbn-hsp-60" /locus_tag="CAEBREN_03890" /note="contains similarity to Pfam domain PF00118; contains similarity to Interpro domains IPR017998 (Chaperone, tailless complex polypeptide 1), IPR018370 (Chaperonin Cpn60, conserved site), IPR001844 (Chaperonin Cpn60), IPR002423 (Chaperonin Cpn60/TCP-1)" /codon_start=1 /product="CBN-HSP-60 protein" /protein_id="EGT57099.1" /db_xref="InterPro:IPR001844" /db_xref="InterPro:IPR002423" /db_xref="InterPro:IPR017998" /db_xref="InterPro:IPR018370" /db_xref="PFAM:PF00118" /db_xref="WormBase:CBN03890" /db_xref="WormBase:WBGene00142615" /translation="MLRLARKGVQTAIVRSYAKDVKFGAEGRQAMLVGVNLLADAVSV TMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAGD GTTCATVLARAIAKEGFESIRQGGNAVEIRRGVMNAVDVVVAELKKLSKQVTTPEEIA QVATISANGDTVVGNLISDAMKKVGTTGVITVKDGKTLTDELELIEGMKFDRGYISPY FITSAKGAKVEYEKALVLLSEKKISQVQDIVPALELANKLRRPLVIIAEDVDGEALTT LVLNRLKVGLQVVAVKAPGFGDNRKNTLKDMGIATGATIFGDDSNLIKIEDITANDLG EVDEVTITKDDTLLLRGRGEQAEIEKRIEHITDEINQSTSEYEKEKLNERLAKLSKGV AVLKIGGASEVEVGEKKDRVTDALCATRAAVEEGIVPGGGVALLRSLNALKSYKAANE DQQIGVNIVKKALVQPISTIVKNAGLEPSSIIDEVVGNSNAAYGYDALNSKFVNMFEA GIIDPTKVVRTALQDASGVASLLATTECVVTEIPKEEPAGPAGGMGGMGGMGGMGGMG F" gene complement(<314814..>318033) /locus_tag="CAEBREN_28746" /db_xref="WormBase:WBGene00190711" mRNA complement(join(<314814..314963,315150..315259, 316389..316518,316679..317090,317136..317266, 317555..317692,318001..>318033)) /locus_tag="CAEBREN_28746" /product="hypothetical protein" /db_xref="WormBase:CBN28746" /db_xref="WormBase:WBGene00190711" CDS complement(join(314814..314963,315150..315259, 316389..316518,316679..317090,317136..317266, 317555..317692,318001..318033)) /locus_tag="CAEBREN_28746" /note="contains similarity to Pfam domain PF04991; contains similarity to Interpro domains IPR007074 (LicD-like), IPR009644 (Fukutin-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57108.1" /db_xref="InterPro:IPR007074" /db_xref="InterPro:IPR009644" /db_xref="PFAM:PF04991" /db_xref="WormBase:CBN28746" /db_xref="WormBase:WBGene00190711" /translation="MNSIKSCSPSTRLSDSCRTWLLELGQTPVPALLIDRHILRQLEY GRCDQVELNISVKIGVDDVFQWKSHSWDQKFEVMYYSNDTHNDFLDFQNEQRRIIPKN FPYLRIGNLLVPTVIPVFLELWHRSNYIPCRNMTIKRDSPKLKNFPFLQKLILKDPRI PAVESVRHLANLRDQLLRFGIIPFLNGGTFLGWFRECSVIPHTTDMDIAIFSENWNPE FFEFLWSRESDFKVKRQLGMVNDSYEITVLPRVGFPTPIDIFLLYEGRNETTGTNYRW VGGTAIDGKKYKYIYPPYDPYCAADLLGHIFWVTCTPEEKVLQEYGPNWYVDQNSLKY VWNAARNVVENGQFTEEQMRDEVYNEYRFKQFT" gene <321075..>322178 /locus_tag="CAEBREN_15402" /db_xref="WormBase:WBGene00154127" mRNA join(<321075..321796,322043..>322178) /locus_tag="CAEBREN_15402" /product="hypothetical protein" /db_xref="WormBase:CBN15402" /db_xref="WormBase:WBGene00154127" CDS join(321075..321796,322043..322178) /locus_tag="CAEBREN_15402" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57126.1" /db_xref="WormBase:CBN15402" /db_xref="WormBase:WBGene00154127" /translation="MRAGPKFSKYAFFQTVPTPTPSPSPPPISTSDASTNTDEPHLSL EDLQPILTNSIAKHLKERLPPKHPEPKKTREDPIEDPTPSKPPVQNQNVLQNSTYNLF PRMSKLKDLDAIIKQKETQLAILNLEIETNRNIKKVIEMRAVMKEKKEKKAAEEKSEA KMEPEPPKKAPSESEDTSSSSRSSTSGTESSETGTSSSSDSSSEDSTSPSSSSSPPSS AETVRAAQPGQNLAVKDKNDGDSTIEDPFSSRQESSPPEEVPPESPTTAYLNQVRNNI MNQMQKRYL" gene <326015..>328109 /locus_tag="CAEBREN_23322" /db_xref="WormBase:WBGene00162047" mRNA join(<326015..326160,326207..326333,326381..326473, 326523..326855,327128..327591,327641..>328109) /locus_tag="CAEBREN_23322" /product="hypothetical protein" /db_xref="WormBase:CBN23322" /db_xref="WormBase:WBGene00162047" CDS join(326015..326160,326207..326333,326381..326473, 326523..326855,327128..327591,327641..328109) /locus_tag="CAEBREN_23322" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57143.1" /db_xref="WormBase:CBN23322" /db_xref="WormBase:WBGene00162047" /translation="MKFDDFLFTYLGEMGKYQKIQFFLVCLPTIVVSMHALSWTFASV DTPYRCRLPTDLPKNENYYTPLLNFTKCTNDADANVPISEYGRPGITCHYERCRLPDN ETCSEHIFDHSKVEYTAVQRWEITCDRSWIKATIQAAYYLGQMAGSMTFGVLGDRIGR KKVFFLAILIQITCAYLIAIAPYWWLYAIARAGIGFSHPGIFVIAVVIGMELVGPQYR KLASVITGLFFALGQVFLGIEAIFFTNYQILHVVIASPALLFLSYWWLVPESARWLVS QKRYQEADEVLQKAAKVNGAVLPENWWEQLDDQTTSQDGTPARKLTGADLFKTPELRK RTLVVFFLWPVISMVYYGMAMKANVLGGDIYINFIFAAFVEIPALFIVYLLIDRIGRR YILAGGLFIAGACLLVNWLMGDNVQLWMAITQMAFTKGSITGVYAAIYTYSPELFPTV IRNTAMGFCSTIARVGAIAASYISMWIAEQFGKVFMIIPFGIMAVSAAILTIVFLPET MGKPLPESIEEIEEGTSYRSSHEMQPLSKTDEETA" gene complement(326883..326954) /locus_tag="CAEBREN_26754" /db_xref="WormBase:WBGene00187365" tRNA complement(326883..326954) /locus_tag="CAEBREN_26754" /product="tRNA-Gly" /db_xref="WormBase:CBN26754" /db_xref="WormBase:WBGene00187365" gene complement(<328473..>328924) /locus_tag="CAEBREN_05265" /db_xref="WormBase:WBGene00143990" mRNA complement(join(<328473..328778,328880..>328924)) /locus_tag="CAEBREN_05265" /product="hypothetical protein" /db_xref="WormBase:CBN05265" /db_xref="WormBase:WBGene00143990" CDS complement(join(328473..328778,328880..328924)) /locus_tag="CAEBREN_05265" /note="contains similarity to Pfam domain PF00137; contains similarity to Interpro domains IPR020537 (ATPase, F0 complex, subunit C, DCCD-binding site), IPR002379 (ATPase, F0/V0 complex, subunit C), IPR000454 (ATPase, F0 complex, subunit C)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57154.1" /db_xref="InterPro:IPR000454" /db_xref="InterPro:IPR002379" /db_xref="InterPro:IPR020537" /db_xref="PFAM:PF00137" /db_xref="WormBase:CBN05265" /db_xref="WormBase:WBGene00143990" /translation="MYCQRLALPLTRSLLASRAPLALRMENAVAARMISTTVARKDID SAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFSYAILGFALSEAMG LFCLTMGFMILFAL" gene <330347..>331293 /locus_tag="CAEBREN_08715" /db_xref="WormBase:WBGene00147440" mRNA join(<330347..330509,330679..330862,330907..331066, 331114..>331293) /locus_tag="CAEBREN_08715" /product="hypothetical protein" /db_xref="WormBase:CBN08715" /db_xref="WormBase:WBGene00147440" CDS join(330347..330509,330679..330862,330907..331066, 331114..331293) /locus_tag="CAEBREN_08715" /note="contains similarity to Pfam domain PF08718; contains similarity to Interpro domains IPR014830 (Glycolipid transfer protein, GLTP), IPR002355 (Multicopper oxidase, copper-binding site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57112.1" /db_xref="InterPro:IPR002355" /db_xref="InterPro:IPR014830" /db_xref="PFAM:PF08718" /db_xref="WormBase:CBN08715" /db_xref="WormBase:WBGene00147440" /translation="MAAAVVGEPGDVQDQPGHETYFAKPEHFFPHLTEDGKIPTAQFL SACQGIADFVSFLGTTFTLVRKDIQGNVDKVRARFEKDQEGQKYLQDLIDADLAEHGG KFGIATEGLLWLKRGLSFMLELLAEMVAAYNGGLPHNKTEDLSAAVATAYAKSLKRHH GFIAKQAFKVVTMAVPYRHTILKAVALGQEGLDDICIRHIEAHLDNFRLNVKTLVEYY IAKNLDTPDP" gene <331570..>331918 /locus_tag="CAEBREN_16693" /db_xref="WormBase:WBGene00155418" mRNA join(<331570..331623,331763..>331918) /locus_tag="CAEBREN_16693" /product="hypothetical protein" /db_xref="WormBase:CBN16693" /db_xref="WormBase:WBGene00155418" CDS join(331570..331623,331763..331918) /locus_tag="CAEBREN_16693" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57141.1" /db_xref="WormBase:CBN16693" /db_xref="WormBase:WBGene00155418" /translation="MPFRLFRVFLNNERTIQQLSESAPVRLAAKAIVRGMKQVESKVE KIDVGKKFDKFKSIYEEEYQKALKK" gene complement(<332075..>333004) /locus_tag="CAEBREN_11632" /db_xref="WormBase:WBGene00150357" mRNA complement(join(<332075..332194,332241..332321, 332372..332596,332960..>333004)) /locus_tag="CAEBREN_11632" /product="hypothetical protein" /db_xref="WormBase:CBN11632" /db_xref="WormBase:WBGene00150357" CDS complement(join(332075..332194,332241..332321, 332372..332596,332960..333004)) /locus_tag="CAEBREN_11632" /note="contains similarity to Pfam domain PF09360; contains similarity to Interpro domains IPR006622 (Iron sulphur-containing domain, CDGSH-type, subfamily), IPR018967 (Iron sulphur-containing domain, CDGSH-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57081.1" /db_xref="InterPro:IPR006622" /db_xref="InterPro:IPR018967" /db_xref="PFAM:PF09360" /db_xref="WormBase:CBN11632" /db_xref="WormBase:WBGene00150357" /translation="MLGRACQKLQAATPITTSLRGKARGVIVQSYSADVLPYKGKPAA GRSNRVRLEAGKTYHWCSCGLSVTQPFCDGTHKVPGLTNVKPVSFQVEKTADYSLCDC KQTDTRPICDGKHSDVSKAPRDLNASRMVAFDESPVYEGVAHKLGYKPKNGGFQ" gene <333693..>334396 /locus_tag="CAEBREN_22421" /db_xref="WormBase:WBGene00161146" mRNA join(<333693..333923,333975..334145,334190..>334396) /locus_tag="CAEBREN_22421" /product="hypothetical protein" /db_xref="WormBase:CBN22421" /db_xref="WormBase:WBGene00161146" CDS join(333693..333923,333975..334145,334190..334396) /locus_tag="CAEBREN_22421" /note="contains similarity to Pfam domain PF00583; contains similarity to Interpro domains IPR022610 (GCN5-related N-acetyltransferase, C-terminal), IPR016181 (Acyl-CoA N-acyltransferase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57145.1" /db_xref="InterPro:IPR016181" /db_xref="InterPro:IPR022610" /db_xref="PFAM:PF00583" /db_xref="WormBase:CBN22421" /db_xref="WormBase:WBGene00161146" /translation="MKLNENVQITGKNCVLVPYEPCHVKKYHKWMEDEEIRRLTGSER LSLKEEYEMQKSWREDEDKLTFIVLNKEDSEEENRMVGDVNLFISTSASSENPSEDVT EGEVEIMIAEPSGRGKGIGEEAVSLIISWALKNLQINVFRAKITDDNTPSLSLFQKKL GFEQVGYSTAFKEYTLELPQDRLISHFSKVLENSEIEEYKRV" gene complement(<334476..>335593) /locus_tag="CAEBREN_01323" /db_xref="WormBase:WBGene00140048" mRNA complement(join(<334476..334640,334684..334971, 335017..335188,335235..335312,335356..335477, 335528..>335593)) /locus_tag="CAEBREN_01323" /product="hypothetical protein" /db_xref="WormBase:CBN01323" /db_xref="WormBase:WBGene00140048" CDS complement(join(334476..334640,334684..334971, 335017..335188,335235..335312,335356..335477, 335528..335593)) /locus_tag="CAEBREN_01323" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002917 (GTP-binding protein, HSR1-related), IPR011619 (Ferrous iron transport protein B, N-terminal), IPR006073 (GTP1/OBG), IPR006703 (AIG1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57117.1" /db_xref="InterPro:IPR002917" /db_xref="InterPro:IPR006073" /db_xref="InterPro:IPR006703" /db_xref="InterPro:IPR011619" /db_xref="WormBase:CBN01323" /db_xref="WormBase:WBGene00140048" /translation="MHMSVQLKIMEAKLRSVDLVVEVHDARIPVTGRNEQFFRHLYAI RPHILVLNKCDLIDMKLYKRKIEDYYYERGVQKVLFTDCKKRLPRALNDVKKSMLDAL ENTPRFNRAVKTEYQAMVVGIPNVGKSSLINAIRTHTLGIKRKAVEAGARPGVTVRVQ NRVRILDKPPIYIIDTPGVLSPNHRNIDDAMKLALCDLVLESHVNLYYLADYLLFWLN QSGDFSYLKLLGIEDQTDPIDDIQEVLAKTCAANDFRIQRSMGERWDFDRAAKHFIQL YRNSKFQDSCLDNDLFLYRN" assembly_gap 336524..336997 /estimated_length=474 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <337484..>340514 /gene="Cbn-snf-6" /locus_tag="CAEBREN_20781" /db_xref="WormBase:WBGene00159506" mRNA join(<337484..337579,337625..337718,337766..337825, 338414..338734,338788..338938,338986..339357, 339407..>340514) /gene="Cbn-snf-6" /locus_tag="CAEBREN_20781" /product="CBN-SNF-6 protein" /db_xref="WormBase:WBGene00159506" CDS join(337484..337579,337625..337718,337766..337825, 338414..338734,338788..338938,338986..339357, 339407..340514) /gene="Cbn-snf-6" /locus_tag="CAEBREN_20781" /note="contains similarity to Pfam domain PF00209; contains similarity to Interpro domain IPR000175 (Sodium:neurotransmitter symporter)" /codon_start=1 /product="CBN-SNF-6 protein" /protein_id="EGT57114.1" /db_xref="InterPro:IPR000175" /db_xref="PFAM:PF00209" /db_xref="WormBase:CBN20781" /db_xref="WormBase:WBGene00159506" /translation="MSISSNEQEHRNGRPGGTNHVDMSLYPPFIKQLDAKLPDYTREG DIEYPFEEITGVGDENRIRGNWSNKSDYLLAVIGFTAGVGSFWKFPFLVFKHGGAAFL VPYLIMLCLAALPMFFMEMVLGQFSSSAAISVWKVVPLFKGVGFAQVTISGFFAVFFN IISAWTLFYLINSFSFSIPWSNCANSWSGENCTLGTRIQCREMNGTLLVNGSCVIEKS FSNETTVIPLHDLDSIPSLKYFHNDVLMLSNGVDDFGTLNWYLGLCVLVCWIAVFLCL FQGVKSSGKVVYVSVILPFIIITVLLTRLLTLDGSISAVLYFLSPKWDVLKDLHVWGE AAVQAFYSVSCCSGGLFTIASYSRFHNNVYKDICLVLVVDVIVSLIGCLLTFSAIGFT CYEFAIALDKFHIRDGFHLVFVFLAEALAGVPVAPLYAGLFFIMILLVVHATQMFVVE TIVSSLCDEYPERLRRNRRHVLTTVCALFICLSIPFCCSAGLYWMELLTQFVLTWPLV VIAFLECMAINWIYGVDNMLDNAKWIVGHWPPCYIFWKILFKFICPLVYLSILCFLWL DWNSISYESYQFPYWSIVTAWGIATLPLILIPIVGIWQFCIAKGSITQKWWRVLYPDD AWGPALAIHRAEKFPLQIPEARRLLLPPEVEITASQRDLQVKPIGFSSINLFHFQEDI PMNGVLTGARSSEFGHQTDGRSVRSTGVTGDVKSIAATINTIPKFERETAI" gene <341701..>343180 /locus_tag="CAEBREN_24962" /db_xref="WormBase:WBGene00163687" mRNA join(<341701..341763,341811..341929,342151..>343180) /locus_tag="CAEBREN_24962" /product="hypothetical protein" /db_xref="WormBase:CBN24962" /db_xref="WormBase:WBGene00163687" CDS join(341701..341763,341811..341929,342151..343180) /locus_tag="CAEBREN_24962" /note="contains similarity to Pfam domain PF07851; contains similarity to Interpro domains IPR012926 (TMPIT-like), IPR003529 (Long hematopoietin receptor, gp130 family 2, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57093.1" /db_xref="InterPro:IPR003529" /db_xref="InterPro:IPR012926" /db_xref="PFAM:PF07851" /db_xref="WormBase:CBN24962" /db_xref="WormBase:WBGene00163687" /translation="MTTEKLENEWKLVQDDFQKLERIHDEYIQKSRQVSKFQDTAGKA MKHHNYLIKNWKETMRQTQQTIDKLESPEQKKTAQERVAKLREELEVSNLRLRDMQGE LPAQSNGFYLNLILGSNLNVSLLTKTEKFKYKEEYEGFKWNITILICVLALISWMWPF RVFDSILCFLMVWYYCTLTIRESVLRVNGSKIKGWWLSHHYLSCAVPGIVLTWKDGLC YQEFRPYFLVFTFYISLVQLAQNQYQSGCLRRLHSLGQGHQMDITVEGFTSWQFKGLT FLLPFLTIGYVGLVQKKKQFLIFLQLFQLYLSWKLFGHTKTDACDGLWQVWALSLLLG AIAGGNIVTTSMVCIRKLKTSPSYTNIVALTRKYSSRHKINQAPPTFEHTASSASTRA PPPPTDKLHIH" gene <344537..>344611 /locus_tag="CAEBREN_18748" /db_xref="WormBase:WBGene00157473" mRNA <344537..>344611 /locus_tag="CAEBREN_18748" /product="hypothetical protein" /db_xref="WormBase:CBN18748" /db_xref="WormBase:WBGene00157473" CDS 344537..344611 /locus_tag="CAEBREN_18748" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57140.1" /db_xref="WormBase:CBN18748" /db_xref="WormBase:WBGene00157473" /translation="MEVWIFEFIGDWIRIEDQVFNKFS" gene complement(<345056..>346834) /gene="Cbn-rep-1" /locus_tag="CAEBREN_25674" /db_xref="WormBase:WBGene00164399" mRNA complement(join(<345056..345315,345362..345797, 345846..346053,346104..346258,346319..346549, 346603..346672,346719..>346834)) /gene="Cbn-rep-1" /locus_tag="CAEBREN_25674" /product="CBN-REP-1 protein" /db_xref="WormBase:WBGene00164399" CDS complement(join(345056..345315,345362..345797, 345846..346053,346104..346258,346319..346549, 346603..346672,346719..346834)) /gene="Cbn-rep-1" /locus_tag="CAEBREN_25674" /note="contains similarity to Pfam domain PF00996; contains similarity to Interpro domains IPR002005 (Rab GTPase activator), IPR018203 (GDP dissociation inhibitor)" /codon_start=1 /product="CBN-REP-1 protein" /protein_id="EGT57115.1" /db_xref="InterPro:IPR002005" /db_xref="InterPro:IPR018203" /db_xref="PFAM:PF00996" /db_xref="WormBase:CBN25674" /db_xref="WormBase:WBGene00164399" /translation="MEEKLPEYADVVVLGTGLPEALLAAACGRAGLSVLHLDRNQYYG GDWSSFTMTMIHEAAENKDCKLSSEEVSKISSTFLKNNEKLIELGDRKVVDDMDIKWI PREMDEVPMQEKLKALGQMRKFSIDLLPKMLLSKGDMVRTLCDSQVSMYAEFKLVDRQ LCPSECEKTKKILLNPVPVSKGEIFQSEALTMLEKRNLMKFITFCTLWNGKTKSEQFI VMDGTGDRPFAEFLEMMGVSKKLQEFIIHTIGILDSQPTTASGMKACCEFMNSVGCYG PSPFLFPIYGCGELSQCFCRLAAVFGSIYCLGRPIQALVEEDGKIVAVIADNQRINCR HVIMSSRYVPEDIPLQSSQKFDRIVYATDKPLKKDEKEAMTLVNLAAFRPDSEVSRVV EAGGYMSTAPNGHFLVHATGTQEGSSNVESLVERLFEENEISPYWKMSFTMNSLKFDS SQMGGVSNIVVAPPVDPSIHYANVIDEVLLHFSFSFIFDIF" gene complement(<347362..>349826) /locus_tag="CAEBREN_24242" /db_xref="WormBase:WBGene00162967" mRNA complement(join(<347362..347454,347865..348027, 348073..348227,348276..348608,348657..348756, 348807..349143,349188..349446,349503..349611, 349717..>349826)) /locus_tag="CAEBREN_24242" /product="hypothetical protein" /db_xref="WormBase:CBN24242" /db_xref="WormBase:WBGene00162967" CDS complement(join(347362..347454,347865..348027, 348073..348227,348276..348608,348657..348756, 348807..349143,349188..349446,349503..349611, 349717..349826)) /locus_tag="CAEBREN_24242" /note="contains similarity to Pfam domain PF00443; contains similarity to Interpro domains IPR001394 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2), IPR018200 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57156.1" /db_xref="InterPro:IPR001394" /db_xref="InterPro:IPR018200" /db_xref="PFAM:PF00443" /db_xref="WormBase:CBN24242" /db_xref="WormBase:WBGene00162967" /translation="MKENVISKIVHSEYTKLKPQTLSRQNAHFASEPTTIETIPPDVD ARAFLASVIVALLAFLGPFTMDLRGYSPQAIVAGTLIGGTLAAAVTYAFMTSKSETEG DYFPFNFQKILIFLASTSKIVPGLINQGNTCYMNALLQGLASCPSFVGWLRSLKPKPG SFVECLTNVLDDLTQSNGATILPSAIVDSLSVHGWNINIGVEHDLYELFNVFVTTWED ELKASRKVLMNQSIENCCEESSSDESSTDSFAGINGVTGNNTSAISRKLLSFQRVASM ARIDASLRSPCVGLTATEYRCCNSECRYRTVKYESFTVLTLTIPNSQMGTSTNTEALL RRYFCSEIIRDATCDKCKAAERKQQGFLKKHGIVKLPQTLMIRIERVGMLPHGSMKLS EHVHFGEMLSLQDVCFRKNPKINQKAYDDSTNLWQLPDGTSRVVGGAEETRSRSSPIH PTQHVHSGELGPNYAMIDGGSFVAERREAQKYAYQLRAVSEHRGGPYSGHFVTYRRAN YPHHHSWYYTSDATVMRVPYSSVAACQSYMLFYERVRPHRLYDR" gene <351212..>353846 /locus_tag="CAEBREN_17252" /db_xref="WormBase:WBGene00155977" mRNA join(<351212..351454,351503..351673,351855..352018, 352064..352889,352939..353006,353054..353448, 353500..353656,353702..>353846) /locus_tag="CAEBREN_17252" /product="hypothetical protein" /db_xref="WormBase:CBN17252" /db_xref="WormBase:WBGene00155977" CDS join(351212..351454,351503..351673,351855..352018, 352064..352889,352939..353006,353054..353448, 353500..353656,353702..353846) /locus_tag="CAEBREN_17252" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR002464 (DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site), IPR007502 (Helicase-associated domain), IPR011709 (Domain of unknown function DUF1605), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57087.1" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR002464" /db_xref="InterPro:IPR007502" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR011709" /db_xref="InterPro:IPR014001" /db_xref="WormBase:CBN17252" /db_xref="WormBase:WBGene00155977" /translation="MSKYHPGHGQREHHHHPGPSRRGFARPDDSADAPRTGPLILEEK TAENTGGQPVDEQLKVHNNPYASLNIQQQRLRLPITKNRGHILYMCERYRTVIIVGET GCGKSTQVPQFLLEAGWAADGRQIAITQPRRVAVVTLATRVAEEKDCILGHDVGYTVR FDDVSDKDTKVKFMTDGLLLREILMDPLLSKYSIIMIDEAHERSCNTDILLGLLRKIM QVRNDLRIIVSSATLDAELFKDFFEMNETRNPDKDTAGIISVEGRTHPVSVHHTKTSV PDYCQAAVDTVINIHKHEMPGDILVFLTGQDEVEEVCEKLREGARSLRNVDKLWVVPC YGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAVNASNG VESLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPEKEFDKLAEGTIPEIQRCHLAATI LQLKALGVQNVHRFHYLSPPPSWSMIQGLELLYALGAIDETSQLTDPLGVQMAEFPLP PMHSKCLLKSAEFGCSDEIVTIVAMMQIQDVFITPFRARHQADIIRKKFAVEEGDHMT MLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIPKVSCRGLINS SENIRQCLVTGFFSQAAQYHYTGKYMTVKENFPFNVYKGSSIMFKKDYPKWVIFTEVM QDSIRDVTVIEPEWLYELAPHYYEFGTEGELAEKRMNLGK" gene <355041..>355768 /locus_tag="CAEBREN_24966" /db_xref="WormBase:WBGene00163691" mRNA join(<355041..355176,355225..355343,355391..355522, 355619..>355768) /locus_tag="CAEBREN_24966" /product="hypothetical protein" /db_xref="WormBase:CBN24966" /db_xref="WormBase:WBGene00163691" CDS join(355041..355176,355225..355343,355391..355522, 355619..355768) /locus_tag="CAEBREN_24966" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57144.1" /db_xref="WormBase:CBN24966" /db_xref="WormBase:WBGene00163691" /translation="MNSTFLTFLLLCTLAVQLSFTFTDDELLLEVHSACPPMTMSCPK KEYAIVPHNHIWNDSAVMKSLVIKQLKEEEIKPTNLKKFLKKTFCCYEGPCMAACGLH HHEETKLAQGFPENAQQILALNLPELEPFRKYVEKYIEKNGFQREDEYPAEIEEFLDA ITKLDALINDLLSNRVDN" gene <357029..>357785 /locus_tag="CAEBREN_22202" /db_xref="WormBase:WBGene00160927" mRNA join(<357029..357179,357304..357416,357463..357594, 357636..>357785) /locus_tag="CAEBREN_22202" /product="hypothetical protein" /db_xref="WormBase:CBN22202" /db_xref="WormBase:WBGene00160927" CDS join(357029..357179,357304..357416,357463..357594, 357636..357785) /locus_tag="CAEBREN_22202" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57125.1" /db_xref="WormBase:CBN22202" /db_xref="WormBase:WBGene00160927" /translation="MGKLMIFVFCFLHLLHPALSATKWPSFTDSQIMELLPRICPAKN LLCPSPRYSKETYVWDEVKVLSSEAVATFKSGKIKREDTYRFFKKEFCCDEPQCLKLC GIFKKEEIGLVKDFPGNVRKIFSLKLDGLEKFRQNVEKYLRHSNNTSSRGYPAEIEDY FDFIAKHEDRILSLLGKSKNE" gene complement(<358224..>359449) /locus_tag="CAEBREN_21762" /db_xref="WormBase:WBGene00160487" mRNA complement(join(<358224..358361,358418..358549, 359150..359268,359314..>359449)) /locus_tag="CAEBREN_21762" /product="hypothetical protein" /db_xref="WormBase:CBN21762" /db_xref="WormBase:WBGene00160487" CDS complement(join(358224..358361,358418..358549, 359150..359268,359314..359449)) /locus_tag="CAEBREN_21762" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57080.1" /db_xref="WormBase:CBN21762" /db_xref="WormBase:WBGene00160487" /translation="MIALISVLLLASIVTPSEPRMITDDMFLTAISNLCRPGSMSCPR KEFSTNPMMYEWDKAAILASPVISDIRNGKVDPEDWKALITHTFCCKEGDCLRECRIF RITESSLVEGFPGNTDQIFSLPIPALQRYRPHVDAFKKIYGLEGIITPAEIEEYFDYL AANERKLKILLALQ" gene <362190..>364160 /locus_tag="CAEBREN_13476" /db_xref="WormBase:WBGene00152201" mRNA join(<362190..362216,362284..362488,362965..363179, 363471..363668,364062..>364160) /locus_tag="CAEBREN_13476" /product="hypothetical protein" /db_xref="WormBase:CBN13476" /db_xref="WormBase:WBGene00152201" CDS join(362190..362216,362284..362488,362965..363179, 363471..363668,364062..364160) /locus_tag="CAEBREN_13476" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57151.1" /db_xref="WormBase:CBN13476" /db_xref="WormBase:WBGene00152201" /translation="MSSKSDVEQDFFVEIDDTVGDYSARSVSAALRKVENLKVDDLPA EHRCGLLRRHAEYLYMMSNYETMKEKRVEMLETAYKKARQGHVMNPNDFECAKVLCST CGRLAEESSLKKKLDYGFKFKTYLDEAIAISDQDFELCHMRGRFCYTVASLSFVERCA AKVIGQIPDVSYKMALDDLLKADRLEQGVAENQLFIGKTYMALGDMVNAKKWLVKTAS NTTEVPLEQEYVDEAAALLEEKKFKSIKI" gene complement(<364466..>365390) /locus_tag="CAEBREN_21791" /db_xref="WormBase:WBGene00160516" mRNA complement(join(<364466..364610,365326..>365390)) /locus_tag="CAEBREN_21791" /product="hypothetical protein" /db_xref="WormBase:CBN21791" /db_xref="WormBase:WBGene00160516" CDS complement(join(364466..364610,365326..365390)) /locus_tag="CAEBREN_21791" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57124.1" /db_xref="WormBase:CBN21791" /db_xref="WormBase:WBGene00160516" /translation="MAPMRRWIILLLFAVLLVSQVISQSEPTKDKKQGRKVSELGPSY MRKRTQFPSIFLRPYRPTLALLLVS" assembly_gap 373960..374260 /estimated_length=301 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<380774..>387905) /gene="Cbn-trp-2" /locus_tag="CAEBREN_24560" /db_xref="WormBase:WBGene00163285" mRNA complement(join(<380774..380855,380903..381031, 381079..381220,381700..381790,382289..382336, 382386..382459,382614..382685,382728..382972, 383513..383638,383684..383771,383822..384011, 384067..384206,384507..384638,385174..385318, 385366..385455,385501..385683,385727..386071, 386407..386505,386756..386828,387694..>387905)) /gene="Cbn-trp-2" /locus_tag="CAEBREN_24560" /product="CBN-TRP-2 protein" /db_xref="WormBase:WBGene00163285" CDS complement(join(380774..380855,380903..381031, 381079..381220,381700..381790,382289..382336, 382386..382459,382614..382685,382728..382972, 383513..383638,383684..383771,383822..384011, 384067..384206,384507..384638,385174..385318, 385366..385455,385501..385683,385727..386071, 386407..386505,386756..386828,387694..387905)) /gene="Cbn-trp-2" /locus_tag="CAEBREN_24560" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002153 (Transient receptor potential protein), IPR005821 (Ion transport), IPR004729 (Transient receptor potential channel), IPR013122 (Polycystin cation channel, PKD1/PKD2), IPR020683 (Ankyrin repeat-containing domain), IPR013555 (Transient receptor potential II)" /codon_start=1 /product="CBN-TRP-2 protein" /protein_id="EGT57103.1" /db_xref="InterPro:IPR002153" /db_xref="InterPro:IPR004729" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR013122" /db_xref="InterPro:IPR013555" /db_xref="InterPro:IPR020683" /db_xref="WormBase:CBN24560" /db_xref="WormBase:WBGene00163285" /translation="MSSSEVSEFRMIEDDDDVSKDVTWLESDSSRLREKQFLLSCERG DIGSVRKLLAGISTENFNINCLDPLGRNALLIAIENENIEMIELLLDHNIETGDAILY AIGEENVEAVEIIVEHLEKMDKFDAERQGVEITEHSAFTPDITPIVLAAHKDNYECIK LFLDKKGTVPHPHDVRCSCPECYVAREEDSLRLSRSRINAYRALTSPSLICLSARDPI LYAFELSWELKRLSFIENEFRTDYEELSQKCQKFCVHMLDQVRGSKELEVVLNHTTNA WHDVTSANYGNPEKLARLKLAIQLSQKRFVAHPNCQQLLLDIWYEGVESVRCTNFIYK TIFYFLGMMSFPLFSLVYLLAPHSSMGQFAKKPFIKFLSHSGSYIFFLILLIMASQRM NVIDNLLRTDDVDRKETRGPPPTVIECAIFLWVLGLIWVEIKQLWECGLYNYCRNLWN ILDFITNSLYLCTTALRVVSYVQVEKEARQANSVHIARHLPRRDWDAWDPTLLSECFF ATANIFSSLKLVHIFTVSPHLGPLKISLGRMVIDIVKFFMVYALVLFAFACGLNQLLW YYASMRQNECNLYEQYKNEKSLSYKYEHLKESCDDKYKSCSSIYHTAETLFWALFGLV DLTHFRLKEDHFLSEWTGKTIFGSYCCCSIIVLLNMLIAMMSNSYQYISDQADIEWKF ARSRLFLEYFDDTATLPPPFNIVPSPKSIYYCLNYLTKKLCNCTKLQQPSKQKSMRNQ KILRSVNDRENNYRDISAFRYELLGILRNAGYQTGHTDINQKTSSRNKKKTAMAERRL KNSALLHQEFPVPQMFQSGQRNMSISSIQSNGRLKPSFLPSTSKLSWNNLRVKASRLS KSKSIDTTHLDVTRLQALSKKSPLQKQAHTSFETTSLNDDTDELL" gene complement(<392191..>394964) /gene="Cbn-tbc-10" /locus_tag="CAEBREN_10907" /db_xref="WormBase:WBGene00149632" mRNA complement(join(<392191..392274,392398..392667, 393205..393460,393507..393622,393938..394154, 394203..394456,394806..>394964)) /gene="Cbn-tbc-10" /locus_tag="CAEBREN_10907" /product="CBN-TBC-10 protein" /db_xref="WormBase:WBGene00149632" CDS complement(join(392191..392274,392398..392667, 393205..393460,393507..393622,393938..394154, 394203..394456,394806..394964)) /gene="Cbn-tbc-10" /locus_tag="CAEBREN_10907" /note="contains similarity to Pfam domain PF00566; contains similarity to Interpro domain IPR000195 (RabGAP/TBC)" /codon_start=1 /product="CBN-TBC-10 protein" /protein_id="EGT57163.1" /db_xref="InterPro:IPR000195" /db_xref="PFAM:PF00566" /db_xref="WormBase:CBN10907" /db_xref="WormBase:WBGene00149632" /translation="MQISSTSSNGIYSNIDYRMTVSCPPETFDDTVPSKQIKKEISFV IERPERPGETSSHHGSKRSSVSYSADEEYDNFPEDEVAAQNQKISQNIETFEPQPVTS RSQNTVQFSLDNLTKKTTETHPETDRFGFFIEERGSATPPLDPKVLRRREKKWIQMLD NWRYFMDEKFELVKNRCRKGIPPSLRGRAWKYLSGATYQMEVSSNRFVFDYCVKQAGD PKWNEDIQKDLSRQFPEHEMFARVGKYGSNGKNDLFDLLKAWTVLHPEEGYCQGQAPI AAVLLMHMPVRDAFYCFVQICHKYLPGYYSSGLEAVQVDGDILVKLLKDKSKLTYRHF KNNGVDPALYMIEWFMCVFCRTLPWPTVLRVWDMFLCEGVKILFKVALVLLKYGLGTP SQIKQFPDMPAIVTRLRNLPAEIVEEEFIVQKIGEINLNDADMEKLHFGAMKTRQMRF D" gene complement(<396487..>398058) /gene="Cbn-chin-1" /locus_tag="CAEBREN_12224" /db_xref="WormBase:WBGene00150949" mRNA complement(join(<396487..396645,396690..396759, 396805..397395,397447..397595,397644..397760, 397808..397953,398028..>398058)) /gene="Cbn-chin-1" /locus_tag="CAEBREN_12224" /product="CBN-CHIN-1 protein" /db_xref="WormBase:WBGene00150949" CDS complement(join(396487..396645,396690..396759, 396805..397395,397447..397595,397644..397760, 397808..397953,398028..398058)) /gene="Cbn-chin-1" /locus_tag="CAEBREN_12224" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR020454 (Diacylglycerol/phorbol-ester binding), IPR002219 (Protein kinase C-like, phorbol ester/diacylglycerol binding), IPR000980 (SH2 motif), IPR000198 (RhoGAP)" /codon_start=1 /product="CBN-CHIN-1 protein" /protein_id="EGT57166.1" /db_xref="InterPro:IPR000198" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR002219" /db_xref="InterPro:IPR020454" /db_xref="WormBase:CBN12224" /db_xref="WormBase:WBGene00150949" /translation="MDDDGPPGTSGGSRGYWKQNLYLLQERAPKPNAVVCRRQLPNKP RHFGVEFHGLIDRNEAEKMLLEAGEGSYLVRESNRSRDACTLCMVFDAKVMNYKLYYD GQFYVGEKRFDTMDLLVADGLISMFVDLHAADYIKRMADEAIYEDSPYSRYTNAATTS DIVRRPVKRAHNFTSYTFKAPHYCDYCRNFLWGLVHQGMRCEDCGFAAHKKCSEKTLH DCLPDSKYVKRMFGVDITTLCMAHGADIPPIVSLCINEVESRGLNVEGIYRVSGSYEH MEKLKQQFDSNQYVDLATVADIHTVCGLLKLYFRLLPQQLIPFSVHKQLLVAYQETNQ RAAHERERGLRKVMMELSDANIITLGAVLAHLKKVADHSSKNKMTVENLATIFSPTLF CSGSIPAMPNHQLLHFLINNPRVVPKHH" gene <398329..>401004 /locus_tag="CAEBREN_11654" /db_xref="WormBase:WBGene00150379" mRNA join(<398329..398375,398424..398503,398661..398790, 398835..399493,399549..399883,399933..400247, 400295..400570,400621..>401004) /locus_tag="CAEBREN_11654" /product="hypothetical protein" /db_xref="WormBase:CBN11654" /db_xref="WormBase:WBGene00150379" CDS join(398329..398375,398424..398503,398661..398790, 398835..399493,399549..399883,399933..400247, 400295..400570,400621..401004) /locus_tag="CAEBREN_11654" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR015847 (Exoribonuclease, phosphorolytic domain 2), IPR001247 (Exoribonuclease, phosphorolytic domain 1), IPR012162 (Polyribonucleotide nucleotidyltransferase), IPR012340 (Nucleic acid-binding, OB-fold), IPR015848 (Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT57077.1" /db_xref="InterPro:IPR001247" /db_xref="InterPro:IPR012162" /db_xref="InterPro:IPR012340" /db_xref="InterPro:IPR015847" /db_xref="InterPro:IPR015848" /db_xref="WormBase:CBN11654" /db_xref="WormBase:WBGene00150379" /translation="MRISQLPLRISKRFHSKEYRLAGQEQSVSVEFEGKSEIELKTGH IARFASSAVVASSGDNAVMATVVQRKTKQGDGNGVPLQVEYRPSASAIGRIPTNFLRR ELSQSDNEILISRAIDRSIRPLLPLNSYETQVICKPLVLDENADQIMLGINAASTALH ISSAPFNGPLAALRVAMNSRGDFRINPTQEELHQANLNLIVAMKQNQKTVMIELDCRE TRGEELEQALDVAFTNVEKLHLAMEKLAIDSNIEKDVLPEKSLEKLMTVLDELTRERI YYVMTDSTHDKISRDNEIKAIFQDVANSSELEKFDREDVSTCYSSLTKKILRETVLST GIRCDGRKTTEFRPIRIQVDMYKKLHGCSMFQRGQTQVMSTVTFDSPTAAFHPDSVAQ LLGSQRKKSFMLHYEFPSFAINDIGTSRSLNRREIGHGALAEKALKDLFPKDFPYATR LACQVLESNGSSSMASVCGGSLALFDAGVPMKNAAAGVAIGLISDEQEPDTKYKVLTD ILGIEDYAGDMDFKVAGTKDGFTAAQLDVKNDGLTREQLRESMQAARAGIDHVLKKMN VMRDRPREQFKSTVPIIHSMRIEPHKRVTLFRNNGYNCKLIEAETGVKISAEDESNLS LLAQNKEKLQKAIDLMNEVLESNTNVDFAFGSIVQAEIVEVLDRGVFVTLPGSSRRFF MSNAHLSLNPVRHPEVLGLKVGDKMSCNWFGRDEQTGNVRLSRKTLQGSSPPATSQKK K" CONTIG join(ABEG02002676.1:1..3690,gap(10),ABEG02002677.1:1..11795, gap(323),ABEG02002678.1:1..51749,gap(5129), ABEG02002679.1:1..175573,gap(10),ABEG02002680.1:1..1452,gap(10), ABEG02002681.1:1..49917,gap(10),ABEG02002682.1:1..6308,gap(232), ABEG02002683.1:1..30315,gap(474),ABEG02002684.1:1..36962,gap(301), ABEG02002685.1:1..27875) //