LOCUS GL379840 647152 bp DNA linear CON 13-MAR-2015 DEFINITION Caenorhabditis brenneri unplaced genomic scaffold Scfld02_54, whole genome shotgun sequence. ACCESSION GL379840 ABEG02000000 VERSION GL379840.1 DBLINK BioProject: PRJNA20035 BioSample: SAMN02953693 KEYWORDS WGS. SOURCE Caenorhabditis brenneri ORGANISM Caenorhabditis brenneri Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 647152) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis brenneri Sequencing and Analysis Consortium TITLE Direct Submission JOURNAL Submitted (21-JUL-2010) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA REFERENCE 2 (bases 1 to 647152) CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (28-JUL-2011) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA REMARK Annotation update by submitter COMMENT The organism is Caenorhabditis brenneri Sudhaus & Kiontke, 2007; strain PB2801. This strain is derived from the wild isolate LKC28. It was inbred in Scott Baird's laboratory for 20 generations by transferring one gravid female per generation. The strain LKC28 was established from worms collected by Hernan Ruiz in 2003 from roots of Liriope (Convallariaceae) grown in a nursery in Costa Rica (Provinciade Alajuela) (Sudhaus & Kiontke 2007). LKC28 and three other strains of C. brenneri were described in Sudhaus & Kiontke, 2007. Annotation was added to the scaffolds in July 2011. ##Genome-Assembly-Data-START## Assembly Method :: PCAP v. 9/3/04 Assembly Name :: C_brenneri-6.0.1 Genome Coverage :: 9.5x Sequencing Technology :: ABI ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..647152 /organism="Caenorhabditis brenneri" /mol_type="genomic DNA" /submitter_seqid="Scfld02_54" /strain="PB2801" /db_xref="taxon:135651" /chromosome="Unknown" gene complement(<9612..>10965) /locus_tag="CAEBREN_31260" /db_xref="WormBase:WBGene00193225" mRNA complement(join(<9612..9727,9776..9986,10035..10277, 10322..10537,10599..10768,10815..>10965)) /locus_tag="CAEBREN_31260" /product="hypothetical protein" /db_xref="WormBase:CBN31260" /db_xref="WormBase:WBGene00193225" CDS complement(join(9612..9727,9776..9986,10035..10277, 10322..10537,10599..10768,10815..10965)) /locus_tag="CAEBREN_31260" /note="contains similarity to Pfam domain PF08737; contains similarity to Interpro domain IPR014848 (Rgp1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53301.1" /db_xref="InterPro:IPR014848" /db_xref="PFAM:PF08737" /db_xref="WormBase:CBN31260" /db_xref="WormBase:WBGene00193225" /translation="MLELTATLDREVAIYLAGETIQVTVTVSNLSRGKQGIVEQLAWG SLQLICERTIGANSSLSSSSATSRPRPTTSVTKSAATVYSSPPNILFCELQLGPGQTK QFSCDIPLSRNGIPPTFRGHLVKYSNRVTVAVSHVQEHIKSAHLPIRIIPSVGLETKL SLPVNPFLASTLTRPSVVETVMATVDDLTQARKSLVFALTHNSSTSRVALLTLPKKAY KLGDDVCGFLDFNGATTPCVQYSATIETEEHLIDADVEEGKKKMVKVHCQTAPICTFS PDSTFRLSIPLTATPTFSTDSVQLKWKIRFVFVVTEKAYDVHLNGDVASSSAPTDVPV ESFSWSTDLLVLPCKPQNAALIDNTFPNRISMTV" gene complement(<11181..>12533) /locus_tag="CAEBREN_32805" /db_xref="WormBase:WBGene00195097" mRNA complement(join(<11181..11720,11892..12086,12130..12324, 12372..>12533)) /locus_tag="CAEBREN_32805" /product="hypothetical protein" /db_xref="WormBase:CBN32805" /db_xref="WormBase:WBGene00195097" CDS complement(join(11181..11720,11892..12086,12130..12324, 12372..12533)) /locus_tag="CAEBREN_32805" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53210.1" /db_xref="WormBase:CBN32805" /db_xref="WormBase:WBGene00195097" /translation="MTIITGRQGSVVAVSYDMILVRFEGKGVLFKKDMLSRSFKHDDI VLFNAKKASTVDIEVGDKLSQMANYEIMWLGTDIKFIKPGRMLIAEGAVINIPDEKGQ YMFVDWKYTKNPPCLPKIPGYNKPLTTNVFITRATIRPDVENLTEMFKPGQRVKFVAR EQAPNERGVCWRAALATDEYHEIVMDAPTTQGRPNHRVIPKAGVIPPASGSRMINMKL SSDTHMKPSMNTPSTSSNAALYSQRPLVKPKPLEPPKSSATSPSKSESQNCWSAPSTP VLVKPKPIDGFDYFDCSKEACAARFEHFSEFHLLSSQFQFPFSASDYRDRNPSCFMSQ SSFENCLKIKYLNQMSKELSAIQAAKLCF" gene complement(<12698..>13398) /locus_tag="CAEBREN_29425" /db_xref="WormBase:WBGene00191390" mRNA complement(join(<12698..12894,12941..13093,13140..>13398)) /locus_tag="CAEBREN_29425" /product="hypothetical protein" /db_xref="WormBase:CBN29425" /db_xref="WormBase:WBGene00191390" CDS complement(join(12698..12894,12941..13093,13140..13398)) /locus_tag="CAEBREN_29425" /note="contains similarity to Pfam domain PF00572; contains similarity to Interpro domains IPR005822 (Ribosomal protein L13), IPR005755 (Ribosomal protein L13, eukaryotic/archaeal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53309.1" /db_xref="InterPro:IPR005755" /db_xref="InterPro:IPR005822" /db_xref="PFAM:PF00572" /db_xref="WormBase:CBN29425" /db_xref="WormBase:WBGene00191390" /translation="MGLSNRAIIIDGKNHLLGRLASIVAKKLLQGEKVVVVRAEEITI SGNFHRSKLKYMSFLRKRCNINPARGAFHYRAPGKIFWRTVRGMLPHKTIRGNEALKN LRAYEGVPAKYQKTKTLHTPSASRFRLQPRRKFCLVGRLSHEVGWQYQDVVAKLEAKR KVKGAAYYEQKKKLDKLAVQAKVNAAPKIAQYQKIIEALGYN" gene complement(<13572..>14819) /locus_tag="CAEBREN_31948" /db_xref="WormBase:WBGene00193913" mRNA complement(join(<13572..13900,13944..14179,14226..14667, 14717..>14819)) /locus_tag="CAEBREN_31948" /product="hypothetical protein" /db_xref="WormBase:CBN31948" /db_xref="WormBase:WBGene00193913" CDS complement(join(13572..13900,13944..14179,14226..14667, 14717..14819)) /locus_tag="CAEBREN_31948" /note="contains similarity to Pfam domain PF04055; contains similarity to Interpro domains IPR013785 (Aldolase-type TIM barrel), IPR003698 (Lipoate synthase), IPR007197 (Radical SAM), IPR006638 (Elongator protein 3/MiaB/NifB)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53315.1" /db_xref="InterPro:IPR003698" /db_xref="InterPro:IPR006638" /db_xref="InterPro:IPR007197" /db_xref="InterPro:IPR013785" /db_xref="PFAM:PF04055" /db_xref="WormBase:CBN31948" /db_xref="WormBase:WBGene00193913" /translation="MLSRVWVRGFADGTKKRTQVIIKDGPSLQDFVSSASVAEAVEKY EGKLKLEKGDRRLRLPPWLKKEKVIQILYRNLCRSLQILPSENENVSRLKKQLKHLKL ATVCQEARCPNLGECWGGSEDSLATATIMLMGDTCTRGCKFCSVKTARAPPPLDPMEP ENTSTAVASWGVEYIVLTSVDRDDLPDGGADHLRKTVQLMKMKKPELLIECLLPDFAG DKFSVEKLATSGLDVYAHNIETVERLTPWVRDPRAKYRQSLEVLKYAKEVSPKLITKT SIMLGLGESDAEIKECLTDLRSSNVDVVTFGQYMQPTKRHLLVKEWVTPEKFDEWAEY SRKLGFLYVASGPLVRSSYKAGEFYLKNVLRNRQN" gene complement(<15674..>18719) /locus_tag="CAEBREN_32225" /db_xref="WormBase:WBGene00194190" mRNA complement(join(<15674..15805,15851..16086,16139..16239, 16288..16448,16492..16614,16667..16785,16834..17616, 17675..17904,17954..18205,18254..18365,18420..18552, 18609..>18719)) /locus_tag="CAEBREN_32225" /product="hypothetical protein" /db_xref="WormBase:CBN32225" /db_xref="WormBase:WBGene00194190" CDS complement(join(15674..15805,15851..16086,16139..16239, 16288..16448,16492..16614,16667..16785,16834..17616, 17675..17904,17954..18205,18254..18365,18420..18552, 18609..18719)) /locus_tag="CAEBREN_32225" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53287.1" /db_xref="WormBase:CBN32225" /db_xref="WormBase:WBGene00194190" /translation="MAQEGGTAVIQRYFGGGDNEQRTALQFAFYNTLLFVLLGVALCG LFALYNMMYMFLSPMLWAVLVGTVLFPFKKKVTDIVQGWLRDLQKANQTLAKAVVTLP FTGFSRISETIYTTFASPNGAIIALAYAALKVLSYERTFMYIISWLGRLYGYLDSFIV FFARPWVLPLIIVYFCCYAAWIYVQDPKQINKKLARSFSLPIWIYVISYASLYFGPFR ACVFGLSAAVLGLLSAGIIGNHRPKETEENIEKSDSSENLDDSSSILPPNVENLLESA KEKLDATEKSLMESSILSTSTVDEAITGDWLIRCVFGLCALLWVVRHDGALILLAIPF VIAVLSRVAEQLGITAAVRNFLDSTWQKIAPSVTKIVEITVAGPLRQFVKMLFSSDKY IVESLHDKMDILSSVIVMALLALSALFAILFVGFQLHGETVHLVRLTSNVVNSRPDWL AAAMDYTEDQLEENNIDIDNYVQQVSYFFSSFLRKKYQAYEQGRAWLASNVRSLANAK DTKRADMLEEQVKQVVDKLYNMWEQRNNNYTVAVNQEPRGDVWQQLKGVTDLTALKDE LTLIVKENLDTLMGIAQSVGSVLAVNVTIFSSLIASFAGIILSFGMDLLNTFIELIVF LTMVYYLLSASRTRWLPLQWASDLSAVTATEDSTSPAAQHHITAAIEHAIFGVFILSA KMAVFYGLYTYFVHSLFDLNIVFVPSMAATLFAAIPIMPPYIVAIFGIVELWLVRGEG AAALVFALASFAPVMFADATFYKEVKGSHPYVTGLAIIGGMYWLGLQGAIIGPIILCL CLVLVNVYLQHVKPSALFTPALTPRNVKLHHH" gene <19208..>20216 /locus_tag="CAEBREN_30657" /db_xref="WormBase:WBGene00192622" mRNA join(<19208..19365,19737..19854,20016..>20216) /locus_tag="CAEBREN_30657" /product="hypothetical protein" /db_xref="WormBase:CBN30657" /db_xref="WormBase:WBGene00192622" CDS join(19208..19365,19737..19854,20016..20216) /locus_tag="CAEBREN_30657" /note="contains similarity to Pfam domain PF01632; contains similarity to Interpro domains IPR021137 (Ribosomal protein L35), IPR019338 (Ribosomal protein L35, mitochondrial)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53305.1" /db_xref="InterPro:IPR019338" /db_xref="InterPro:IPR021137" /db_xref="PFAM:PF01632" /db_xref="WormBase:CBN30657" /db_xref="WormBase:WBGene00192622" /translation="MFSKTALTSLFVTRQAPINICNRGIANIPAHEYHIRFDQRVGRK RPAQDVLDRFKRLNNGMWIHAHPGRHKLRYMKDETWQKTSLYYETCTKEQCEILDKLM TPYWLRPKHYPNDPYSQYHVRHNINSPRVDDRGNFVRERKKVLLDDSTSQRFFNDC" gene complement(<20347..>22790) /locus_tag="CAEBREN_32363" /db_xref="WormBase:WBGene00194328" mRNA complement(join(<20347..20555,20604..20756,21089..21268, 21319..21475,21520..21656,21762..21841,21889..22221, 22269..22434,22481..>22790)) /locus_tag="CAEBREN_32363" /product="hypothetical protein" /db_xref="WormBase:CBN32363" /db_xref="WormBase:WBGene00194328" CDS complement(join(20347..20555,20604..20756,21089..21268, 21319..21475,21520..21656,21762..21841,21889..22221, 22269..22434,22481..>22790)) /locus_tag="CAEBREN_32363" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53285.1" /db_xref="WormBase:CBN32363" /db_xref="WormBase:WBGene00194328" /translation="SHCLSGGFLFGYDTGIVSAAMLYVPNASGIKPLDSVWQEIIVSV TPGVAAIGSLCSGPGSDFLGRKKIIIGASVTFTVGAIICAAAWTKIILLIGRILLGLA IGFASMIVPIYVSEASPSHIRGKLVTGFQLMITVGLVIANIIGGAFSYVDPDQVGWRL MFAFAAVPAIIQFVCFLFLPESPRWLYEHGRTVEAREVLTRIYNGHTEWVDYEINEIS FSYEEELRAKAEHSGNGPTIFRILRTPHVRKALIIGSLLQMFQQLSGINTVMYYTGNI IRSAGVKDNHTTIWISVGTSAINFIGTFIPIALVERLGRRVLLLVSMIGVILFLIAMG VSFLLINNDSSLTYPQNQYGLQPNFNTSIKDATKCMKYSNCDFCVTDEYCGFCENKQT KTGYCLPFPTDDSSHFSATGICQFSNLTDNGKSYEWEDTYCHTKFTVLPIIIMVFYLL SFSAGYAPLPWVLNAEFYPLWARSTAVSISTAFNWIFNLIVSLTFLSLSQAATKYGTF FIYCGCTIVALVFVFFFVPETKGYSIDEVEMLFMSKEEREKAQKVLEESKEGKHRNSV ALSFDTKF" assembly_gap 20786..21039 /estimated_length=254 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 23235..24696 /estimated_length=1462 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 28771..28780 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <29438..>32532 /locus_tag="CAEBREN_28318" /db_xref="WormBase:WBGene00190283" mRNA join(<29438..29516,29569..29696,29742..29812,29871..30119, 30165..30344,30393..30564,30609..30953,31009..31108, 31168..31407,31464..31643,31690..32137,32183..32267, 32314..>32532) /locus_tag="CAEBREN_28318" /product="hypothetical protein" /db_xref="WormBase:CBN28318" /db_xref="WormBase:WBGene00190283" CDS join(29438..29516,29569..29696,29742..29812,29871..30119, 30165..30344,30393..30564,30609..30953,31009..31108, 31168..31407,31464..31643,31690..32137,32183..32267, 32314..32532) /locus_tag="CAEBREN_28318" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR000629 (RNA helicase, ATP-dependent, DEAD-box, conserved site), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53299.1" /db_xref="InterPro:IPR000629" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="WormBase:CBN28318" /db_xref="WormBase:WBGene00190283" /translation="MWRGKYSGGYQNRFVSAKSSGTSSLSDGQSMNNVPPPAALTVGN APVPPPNRNVFMSNRKEQEMKKEQEYANLMAYGSTSEKQSRRKRIYDDEYLEGDSDEE KPKKSTSSKPADDEEEDELDAFMAGIEQQASKDKKVSEQKEKDRKEGKDTEDPSKKGL GRADIDEEDMQESLFKFMEDYKEKHENDEEQYEYDEDGNIIWTWKKVIDPLPDVDHSQ IQYPKFNKNFYEEHEDIKRLQYMDVIRLQNTMNIRVGGLKPPRPVCSFAHFSFDKLLM EAIRRSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA GEGPVAVVVVPTRELAIQVKIGDCFVHKFLIFRCSKKPKDSVKFIILMLFVHMEEAVS GNNLMNYKMREPKWLSGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISD HVRPDRQCLMFSATFKQKVERLARDALVDPVRIVQGEVGEANADIEQKVFIMHTQDMK FQWLIRNLVEFASLGKVLVFVTKKLDAEDVAKKLKLKDFDIVLLHGDMLQAERNENLL KFRKKSPILVATDVAARGLDIAEIRTVVNFDMARDIDTHVHRIGRTGRAGHKGTAYTL VTEKDIEMVGHLVKNLESVSQEVPNQLMDLAMKSSWFRAQRAGHGGPSSGTQTRGRMG LGYTPKVRTAGGEQSGGQQYDPLKEQRSSRGSGVGQNQTIDGMIRSAQSFATSSSTSS GAGPSSGANRAQMLKNAFQKSFQSTFQRPTNESSTLPTAVASDPRPEWKKKVDELNAR IAQQQAAASSSSPSSSSAQSSSSSSASKRSRWQ" gene <32851..>35081 /locus_tag="CAEBREN_31058" /db_xref="WormBase:WBGene00193023" mRNA join(<32851..32966,33008..33161,33214..33301,33350..33453, 33504..33576,33623..33701,33746..33863,34078..34235, 34327..34486,34532..34652,34698..34820,34864..34955, 35004..>35081) /locus_tag="CAEBREN_31058" /product="hypothetical protein" /db_xref="WormBase:CBN31058" /db_xref="WormBase:WBGene00193023" CDS join(32851..32966,33008..33161,33214..33301,33350..33453, 33504..33576,33623..33701,33746..33863,34078..34235, 34327..34486,34532..34652,34698..34820,34864..34955, 35004..35081) /locus_tag="CAEBREN_31058" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53307.1" /db_xref="WormBase:CBN31058" /db_xref="WormBase:WBGene00193023" /translation="MMERIRESGRRLHRVYRETIEWRNPLTGLYLMAVNSAFWIGVIY CDIRIQEAVLATASAGVFAWDILLSSSNDHSIITHILMWPFQSIFRTLSVCGSFYSVH LLRAEEIRLACYSAYATLACLLINPVWEYNEVNAKIGSAAQRTAAWFGNWIQYLIITP IVTVYEYTKYIVLFRWVPPLIAYIKHFVFNFRQAFGELVTGIKNWFQVAVIDRIKRIA ARIRQFLRYWFCAEWWPSLKEWLKINVGVPLRYLFDQLCFVFVYIFCAHWFPPLWRFT VKQLKALSALAYEHVWIPTKAYLLCQIERLRCWLRDTLHRIAISVRDSILWPICCLVV EVGKQVSVFVYHLVLEPVLNYFYGRYKIIETSALIYVLGPVCETVIENIPEKNPFCEE SDTEFDGFLPEVNDETDLDENLVDEDDDDLSQLSSSPIPEEEAEFERGLHFNAINGSE SSDDEFDLDVPKRNVRRRRREPKKAEVEADEDYELLQ" gene complement(<35346..>37272) /locus_tag="CAEBREN_28045" /db_xref="WormBase:WBGene00190010" mRNA complement(join(<35346..35647,35698..36269,36323..36580, 36630..36884,37238..>37272)) /locus_tag="CAEBREN_28045" /product="hypothetical protein" /db_xref="WormBase:CBN28045" /db_xref="WormBase:WBGene00190010" CDS complement(join(35346..35647,35698..36269,36323..36580, 36630..36884,37238..37272)) /locus_tag="CAEBREN_28045" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR013027 (FAD-dependent pyridine nucleotide-disulphide oxidoreductase), IPR006322 (Glutathione reductase, eukaryote/bacterial), IPR000103 (Pyridine nucleotide-disulphide oxidoreductase, class-II), IPR012999 (Pyridine nucleotide-disulphide oxidoreductase, class I, active site), IPR004099 (Pyridine nucleotide-disulphide oxidoreductase, dimerisation), IPR001327 (Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region), IPR000815 (Mercuric reductase), IPR016040 (NAD(P)-binding domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53289.1" /db_xref="InterPro:IPR000103" /db_xref="InterPro:IPR000815" /db_xref="InterPro:IPR001327" /db_xref="InterPro:IPR004099" /db_xref="InterPro:IPR006322" /db_xref="InterPro:IPR012999" /db_xref="InterPro:IPR013027" /db_xref="InterPro:IPR016040" /db_xref="WormBase:CBN28045" /db_xref="WormBase:WBGene00190010" /translation="MLRFQRLWSNSRSIMSGVKEFDYLVIGGGSGGIASARRAREFGV SVGLIESGRLGGTCVNVGCVPKKVMYNCSLHAEFIRDHADYGFDVTLNKFDWKVIKKS RDEYIKRLNGLYESGLKGSSVELIRGRASFAEDGTVEVNGAKYRGKNTLIAVGGKPTI PNIPGAEYGIDSDGFFELEDLPSRTVVVGAGYIAVEIAGVLANLGSDTHLLIRYEKVL RTFDKMLSDELTADMDEETNPLHLHKKTQVTEVIKGDDGLLTVKTTTGVIEKVQTLIW AIGRDPLTKELNLDRVGVKTDSAGHIIVDEYQNTTAPGILSVGDDTGKFLLTPVAIAA GRRLSHRLFNGETENKLTYENIATVVFSHPLIGTVGLTEDEAVAKYGKDEVTLYKSRF NPMLFAVTKHKEKAAMKLVCVGKDERVVGVHVFGVGSDEMLQGFAVAVTMGATKKQFD QTVAIHPTSAEELVTMRGGVKPE" gene <37449..>38985 /locus_tag="CAEBREN_32806" /db_xref="WormBase:WBGene00195098" mRNA join(<37449..37455,37503..37615,37894..37986,38033..38160, 38204..38331,38387..38579,38625..38795,38844..>38985) /locus_tag="CAEBREN_32806" /product="hypothetical protein" /db_xref="WormBase:CBN32806" /db_xref="WormBase:WBGene00195098" CDS join(37449..37455,37503..37615,37894..37986,38033..38160, 38204..38331,38387..38579,38625..38795,38844..38985) /locus_tag="CAEBREN_32806" /note="contains similarity to Pfam domain PF10545; contains similarity to Interpro domain IPR006578 (MADF domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53284.1" /db_xref="InterPro:IPR006578" /db_xref="PFAM:PF10545" /db_xref="WormBase:CBN32806" /db_xref="WormBase:WBGene00195098" /translation="MTESTISTSRRGRPVKRRSFAEFLAFDDSPERDSEEETKKTSRK PTKKARRFQETVSKRNRRKRKACDNILTDYQKPSENTDAEIVTETVYYRPSNNSMFIP SITADMIQDDGKSLTVQTSCDDYFKFARNRQTTKNDHADPRKVFAILRAVRKRPIIWD QRLVCHENMPLIRRAWQQIDAELGFDEEYPLARRKQIWKSKKDYYSFALNSDTLGKWM YSSAMEFYYPMVNFRTTVCLRPTLPCSSTSSSSSANLYDKVVLGDKNVKCTSSDKKNV LAFLLKSLHEIGMADSEMMAEHGQKMLKIFQNNLEEMTSKVELEEILM" gene complement(<39160..>42272) /locus_tag="CAEBREN_30062" /db_xref="WormBase:WBGene00192027" mRNA complement(join(<39160..39246,39359..39473,39520..39622, 39665..39758,39810..39983,40113..40251,40297..40384, 40434..40525,40579..40704,40749..40889,40936..41070, 41165..41274,41319..41415,41468..41671,41715..41801, 41844..41938,41988..42137,42180..>42272)) /locus_tag="CAEBREN_30062" /product="hypothetical protein" /db_xref="WormBase:CBN30062" /db_xref="WormBase:WBGene00192027" CDS complement(join(39160..39246,39359..39473,39520..39622, 39665..39758,39810..39983,40113..40251,40297..40384, 40434..40525,40579..40704,40749..40889,40936..41070, 41165..41274,41319..41415,41468..41671,41715..41801, 41844..41938,41988..42137,42180..42272)) /locus_tag="CAEBREN_30062" /note="contains similarity to Pfam domain PF05978; contains similarity to Interpro domain IPR010291 (Ion channel regulatory protein, UNC-93)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53304.1" /db_xref="InterPro:IPR010291" /db_xref="PFAM:PF05978" /db_xref="WormBase:CBN30062" /db_xref="WormBase:WBGene00192027" /translation="MGDSNTWDLVGEQQQRKKSRSPSRASRVDSELIVGVENAAELEA LGLGKEQLEEEARRHKKQRSKSPALESIRKTSIHILQKFGAIPKKKDDSVLLFRIHDI PDITLDSICIRPKEFFEEPKVFSFRDMGREQQKAEVNEKCSYLFRGTSFEQDDHFELP TETGRVPEYDHFCPIHGSRRRLPRNKLVTMQTLMHSVDGDDNEDLSYIYGHDFLAKLV RKKKREMLSGREKERATKIKRKIMSNLWILSVAFLFLFTAFNGLQNLQTSVNGDLGSD SLVALYLSLAISSLFVPSFMINRLGCKLTFLVAIFVYFLYIVINLRPTYSSMIPASIF CGIAASCIWGAKCQYITEMGIRYASLNFESQTTVIVRFFGYFFMIVHCGQVVGNVVSS YIFTLSYSGSLRGPEDSIYDSCGYQFPKNLSLLSELAESNLARPPQKVYVAVCLAYLA CVIISGMIMSMFLNALAKDTRNRKSSQRFNSEIIQLMLKHLINFKFMLLVPLTIFNGL EQAFLVGVYTKAFVGCGLGIWQIGFVMACFGISDAVCSLVFGPLIKLFGRMPLFVFGA VVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQINGFWVALVGRQSLQFAF TKYRFWESLGISIGFALIRHVTVELYLLITFFVLLLGMCGFVAIENYDHIVVSFNFLT SQTKFFSRKRITKREAERYVNPAQCYD" gene complement(<42837..>46497) /locus_tag="CAEBREN_30956" /db_xref="WormBase:WBGene00192921" mRNA complement(join(<42837..42849,43774..43899,43948..44120, 44358..44680,44791..45079,45131..45229,46318..>46497)) /locus_tag="CAEBREN_30956" /product="hypothetical protein" /db_xref="WormBase:CBN30956" /db_xref="WormBase:WBGene00192921" CDS complement(join(42837..42849,43774..43899,43948..44120, 44358..44680,44791..45079,45131..45229,46318..46497)) /locus_tag="CAEBREN_30956" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019143 (JNK/Rab-associated protein-1), IPR021563 (Rab interacting lysosomal protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53310.1" /db_xref="InterPro:IPR019143" /db_xref="InterPro:IPR021563" /db_xref="WormBase:CBN30956" /db_xref="WormBase:WBGene00192921" /translation="MASDLLVNRHFDEFILECCSSDRPSSAAVLHRPRKKISAFVNAM AAARASSPQSPSKHITVVDVYDLAASIGNDFEKLIDNYGNECVRGIMPKVISALETLE AMAAGNDRENEEIMRLSKAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQM VKSLVNENRNLSTTVSSLPANNDSPVSSSMREADLKMLLELKEMSSQQKDEIKALQKD VETYQGQVENLQTSIEKLIRQNEELLRKNASLQKQGRVIVEEKMEVLKRLEKTEESNI ELKKLVKETDRACKDMQIANQDNNEPRFTLGELREVIKEKNILKGRVMELEEELEQFK PGAKKEIMRLDDDDDSDRLVPNSENPSGVEEDDLPVYGPMPKEPDEKLHPWKYERKDS GVRKLCYA" gene <50364..>51934 /locus_tag="CAEBREN_30973" /db_xref="WormBase:WBGene00192938" mRNA join(<50364..50462,50514..50614,50818..50979,51032..51719, 51782..>51934) /locus_tag="CAEBREN_30973" /product="hypothetical protein" /db_xref="WormBase:CBN30973" /db_xref="WormBase:WBGene00192938" CDS join(50364..50462,50514..50614,50818..50979,51032..51719, 51782..51934) /locus_tag="CAEBREN_30973" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53281.1" /db_xref="WormBase:CBN30973" /db_xref="WormBase:WBGene00192938" /translation="MMLRNLYSIGVRLSSKRQPRFFSNIASGGDDDGKGPKIKDVVDD DLLKAIEGVANNIHPQSVTEKKSLKNALINKLVANEKASFDAAASSASNEMLDDQALI GLLADVAGDAKVEKKVPPKSAQLRQEKRGLVLLRKEIFYQAVQSGFTTEEARVKSETI VNDAQIKLAEQRRALLSDAREKSEQQKEELTERSEREQKLFTKALEFLEKIYKDDLIN SDARKPINVDSNAIKLFQQKPLGAWKKTDKYEDTSLRFWNSWDTRAAKYNRFLTLRYI KFFRIANGSFGPTNSFEEQIDWTTKGKQWEYPIDNEFKIGDEANVSFIDHVFLERHLP SLGIPKTGPIAHFMHLVCVGLSKNPYMTAAKKREHLKWFADYFNTEKQKLVHKLHEQE QIAAQNAL" gene <58683..>60295 /locus_tag="CAEBREN_30843" /db_xref="WormBase:WBGene00192808" mRNA join(<58683..58783,58842..59532,59582..60006, 60100..>60295) /locus_tag="CAEBREN_30843" /product="hypothetical protein" /db_xref="WormBase:CBN30843" /db_xref="WormBase:WBGene00192808" CDS join(58683..58783,58842..59532,59582..60006,60100..60295) /locus_tag="CAEBREN_30843" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53295.1" /db_xref="WormBase:CBN30843" /db_xref="WormBase:WBGene00192808" /translation="MKPSTSKVSSVAPIPEEPSAEYVNNNLPDPDDEPFVSDMRDYLA GEELHRQQSQLAKERYARALPEMVNANRTVTAELFTRFTEDEERKKAEMQKNKEAMAA SATPLSRHSGDSRKRRNDVMAQSAGEERKWQQHQQQWMAQSQMQPGFQMQQQMQMYPH HVQQQQYMQMQMAAQQQQQHHEIQMHHNNQMPSTSTADSARSVQTPASIHQQSPMEGR NGNRMAPSRSGMDTSSPTTGLDQQTDENTLAVPDGDWFEKLAVIVAGQYDVNTVLSQD IYDPILNFAEDVPPANGMINGVAQQCPPPIQQLPTPQPQQHHHQQQKMRMLQQQQQNH EEMQRMEHQRHQQLLQAQQAQLAQQRHQQQQMILQQQQMHQQQQQNQMNGGFQSHAQQ QAAYLQAQRMHQMRMQQHQQQQQQQQQLHHHHQQQQQHHQNGGMGYGMPNGYPPQMMH HAAAAYGHHIPQPTPFANIN" gene complement(<61261..>77873) /locus_tag="CAEBREN_31589" /db_xref="WormBase:WBGene00193554" mRNA complement(join(<61261..61347,61723..62007,62056..62331, 62386..62702,63178..63666,63740..63920,66335..66437, 75488..75829,76614..76840,76887..77133,77186..77312, 77438..77654,77707..77725,77785..>77873)) /locus_tag="CAEBREN_31589" /product="hypothetical protein" /db_xref="WormBase:CBN31589" /db_xref="WormBase:WBGene00193554" CDS complement(join(61261..61347,61723..62007,62056..62331, 62386..62702,63178..63666,63740..63920,66335..66437, 75488..75829,76614..76840,76887..77133,77186..77312, 77438..77654,77707..77725,77785..77873)) /locus_tag="CAEBREN_31589" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019748 (FERM central domain), IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR019750 (Band 4.1 family), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR019747 (FERM conserved site), IPR011993 (Pleckstrin homology-type), IPR014847 (FERM adjacent (FA)), IPR014352 (FERM/acyl-CoA-binding protein, 3-helical bundle), IPR018980 (FERM, C-terminal PH-like domain), IPR001478 (PDZ/DHR/GLGF), IPR019749 (Band 4.1 domain), IPR018979 (FERM, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53294.1" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR011993" /db_xref="InterPro:IPR014352" /db_xref="InterPro:IPR014847" /db_xref="InterPro:IPR016130" /db_xref="InterPro:IPR018979" /db_xref="InterPro:IPR018980" /db_xref="InterPro:IPR019747" /db_xref="InterPro:IPR019748" /db_xref="InterPro:IPR019749" /db_xref="InterPro:IPR019750" /db_xref="WormBase:CBN31589" /db_xref="WormBase:WBGene00193554" /translation="MRLGSNSYDVQRTEAFGQAPVKTPPPNQISSSTQQKKWLDPSKN LRKQMVCPPYHLFFRVKFYVRDPNRLRDEFTRFQFYQQVRQNLEEGRLPCNEGSLALL ASYVVQAEVGDYEEKTHGMSRTCLCYKIQFATLPDDFSDRVAELHQLHTGQTPDIAEQ NFLDHARRLEMYGMDVYDGRDANHLPIEIGVGAVGIKVFHEGIKMNEYAWARIRKLSF KKKQFQVLVANEDGVSETIMIFNIMSSKICKLLWKCCIEQHTFFRLKTPPKTPQRKVF NFGSKFRYSGRTEYQTLEENEHRKSAGHRNFHRSLSKSSFLRSTFSGNTQSIDSSRYT NTTTTDSPELPSRLVSFFHFPLSLYIHKSHLACSLSHSGQLLARRLLSAARHDTDSSD ALGYASDGAVVCAPLTTPLSPRRTRDYATDSESSAPSLRQQRLSKEAIYYGTQESCDE KSWTPSMACTSTSPGIHATASVRPATSGTPNGASRKATSGYSAYGYSNSTQTQQPTST TNANYSPYLNGTISRSSGVAVAKAARGGLPPTSQQSYNTSSPRNSVASYSSFASAGIG GSPPRSRRSPQSNKSSSPVGEDQVVTIKMRPDRHGRFGFNVKGGADQNYPVIVSRVAP NSSADKCQPRLNEGDQVLFIDGRDVSTMSHDHVVQFIRSARSGANGGELHLTIRPNVY RLGEELEEPDSNMVPEPARVADSVPRSDKLSQSLHLLEDSLATGKVVDQFEMLYRKKP GLAMNICRLTANLSKNRYRDVCPYDETRVILQTSGSGDYINANFVNMEIPSSGIINRY IACQGPLAHTSGDFWLMVWEQLCTTIVMLTTLTERGRVKCHQYWPRLYETQEYGRLMI RCIKDKQTTNCCYREFSIRDRTTNEERRVTQMQYIAWPDHGVPDDPKHFIQFVDEVRK ARQGSVDPIVVHCSAGIGRTGVLILMETAACLVESNEPVYPLDIVRTMRDQRAMLIQT PGQYTFVCDSILRAYNDGTIKPLAEYQKR" assembly_gap 77772..77781 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<89019..>94307) /locus_tag="CAEBREN_30153" /db_xref="WormBase:WBGene00192118" mRNA complement(join(<89019..89225,89550..89671,89721..90239, 90290..90582,90633..90830,91026..91171,91354..91554, 93773..93852,93901..94003,94052..94132,94266..>94307)) /locus_tag="CAEBREN_30153" /product="hypothetical protein" /db_xref="WormBase:CBN30153" /db_xref="WormBase:WBGene00192118" CDS complement(join(89019..89225,89550..89671,89721..90239, 90290..90582,90633..90830,91026..91171,91354..91554, 93773..93852,93901..94003,94052..94132,94266..94307)) /locus_tag="CAEBREN_30153" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53308.1" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR008946" /db_xref="InterPro:IPR013088" /db_xref="WormBase:CBN30153" /db_xref="WormBase:WBGene00192118" /translation="MEHPIIQTSEFQDQFSQNCSPASVDSSYSSCSSGSSSVEDEIEI YTRLVRNEAPLRKDYFRDMSKNSSCSSSFDYGDLGPSSSRKGSKTTDADIDSLFQSLV MMSKRTANKLEKPVARLATADDMTVSGLMGLLKTEMEILQETSNQVNTVPKPVTKIEV ETIPEEYDQEPSSSTSRTSEMNASITHIKSELDPTMQAFQMPHHDLFLGSAPHYNPFA LTNEFMAAPNSLVPSFPSSFYNPHLHITEPRRSSQGTIPATAPGGTPSPHSSSVPASP PQLQGFLRSFLNPDTLTAPQPQFGAPPDTLQDADKLCAVCSDRAVCLHYGARTCEGCK GFFKRTVQKQSKYTCAGNQNCPIDKRYRSRCQFCRFQKCLDVGMVKEIVRHGSLSGRR GRLSSKTKLARSEDQPSPPLPLLALMGKAVEDHTNVGMNRQFMAPFDEDCAIRVFHCE LHATKKLLLAMPQICEIPEHDFRILLARSFFPIMAIRCANRSDNNTGSIMFDSGELFS LNAFPTVFQQMLRFMVSKGANFSTLVEWEPQSFAALIALQFLSGNTEQNVLELRHKPL VDQVQSTIINALKDHCSGQQNKLAKIVRLLDEFDVFHGLGIQSLDLIYSNHVLPDEFQ YILRLTRMPLRSVDAPVCGSPVVPTSSAPFNFQMGSTAF" assembly_gap 98787..99386 /estimated_length=600 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<111081..>112926) /locus_tag="CAEBREN_10943" /db_xref="WormBase:WBGene00149668" mRNA complement(join(<111081..111167,111248..111337, 111392..111539,111979..112088,112138..112227, 112274..112374,112601..112749,112793..>112926)) /locus_tag="CAEBREN_10943" /product="hypothetical protein" /db_xref="WormBase:CBN10943" /db_xref="WormBase:WBGene00149668" CDS complement(join(111081..111167,111248..111337, 111392..111539,111979..112088,112138..112227, 112274..112374,112601..112749,112793..112926)) /locus_tag="CAEBREN_10943" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53199.1" /db_xref="WormBase:CBN10943" /db_xref="WormBase:WBGene00149668" /translation="MICPDWLVTFSRVFSLTISIGCAIVYLTSFIVAFRLFKRFHVFF LTFYMAMIFTRFLALSIRSSGYFLVLFRESGVPIQIDNALWLAKFAAHASVLGCIFER SYATFYATNYENSRRCYFVTSCVITCIICTGLTYADASSDLGRKINSVCYGLFCAVTT AILIIINRWLVKKSSAAKCNLSERYQLTENIKALRLLLPFVVSISGNSIILSVGIVAF NIDTVFNLPICRLVPYYLPIFYFIIIVTTIFNLAAPFYVLFHNRKPLQNQRIGVAEIR NVLGVNIIGDGMDKEQYFQQYKTQWA" gene <116444..>116707 /locus_tag="CAEBREN_24906" /db_xref="WormBase:WBGene00163631" mRNA join(<116444..116605,116651..>116707) /locus_tag="CAEBREN_24906" /product="hypothetical protein" /db_xref="WormBase:CBN24906" /db_xref="WormBase:WBGene00163631" CDS join(116444..116605,116651..116707) /locus_tag="CAEBREN_24906" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53322.1" /db_xref="WormBase:CBN24906" /db_xref="WormBase:WBGene00163631" /translation="MKSVFLVLLVLLSISSESVAMPSSEIQNTLFKPSSFVFRAKCKI MCSEMCSPVLGVCDRYNKCVCLNNYRVV" gene <119983..>120565 /locus_tag="CAEBREN_05599" /db_xref="WormBase:WBGene00144324" mRNA join(<119983..120063,120114..120290,120518..>120565) /locus_tag="CAEBREN_05599" /product="hypothetical protein" /db_xref="WormBase:CBN05599" /db_xref="WormBase:WBGene00144324" CDS join(119983..120063,120114..120290,120518..120565) /locus_tag="CAEBREN_05599" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53207.1" /db_xref="WormBase:CBN05599" /db_xref="WormBase:WBGene00144324" /translation="MSCILNRIWKTLRQCVGESSTSTDENERYHPVRPADPSPSQSRS ASPDSLCSVSIRHGSSGSECSGDTWKEYEELRKGFRYARNRSVENTSMDSGYESADI" gene complement(<122621..>122662) /locus_tag="CAEBREN_09475" /db_xref="WormBase:WBGene00148200" mRNA complement(<122621..>122662) /locus_tag="CAEBREN_09475" /product="hypothetical protein" /db_xref="WormBase:CBN09475" /db_xref="WormBase:WBGene00148200" CDS complement(122621..122662) /locus_tag="CAEBREN_09475" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53265.1" /db_xref="WormBase:CBN09475" /db_xref="WormBase:WBGene00148200" /translation="MSRFINYEPMKYI" gene <123491..>125283 /gene="Cbn-ben-1" /locus_tag="CAEBREN_23216" /db_xref="WormBase:WBGene00161941" mRNA join(<123491..123656,123916..124271,124320..124482, 124553..125026,125108..>125283) /gene="Cbn-ben-1" /locus_tag="CAEBREN_23216" /product="CBN-BEN-1 protein" /db_xref="WormBase:WBGene00161941" CDS join(123491..123656,123916..124271,124320..124482, 124553..125026,125108..125283) /gene="Cbn-ben-1" /locus_tag="CAEBREN_23216" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002454 (Gamma tubulin), IPR002452 (Alpha tubulin), IPR002453 (Beta tubulin), IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase domain), IPR004057 (Epsilon tubulin), IPR002967 (Delta tubulin), IPR018316 (Tubulin/FtsZ, 2-layer sandwich domain), IPR013838 (Beta tubulin, autoregulation binding site), IPR017975 (Tubulin, conserved site)" /codon_start=1 /product="CBN-BEN-1 protein" /protein_id="EGT53241.1" /db_xref="InterPro:IPR000217" /db_xref="InterPro:IPR002452" /db_xref="InterPro:IPR002453" /db_xref="InterPro:IPR002454" /db_xref="InterPro:IPR002967" /db_xref="InterPro:IPR003008" /db_xref="InterPro:IPR004057" /db_xref="InterPro:IPR013838" /db_xref="InterPro:IPR017975" /db_xref="InterPro:IPR018316" /db_xref="WormBase:CBN23216" /db_xref="WormBase:WBGene00161941" /translation="MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL ERINVYYNEANAGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWA KGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP DRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLS NPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAK GAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNIQ NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRK AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAEEDGELDGTDGDAE" gene <125673..>126425 /locus_tag="CAEBREN_03320" /db_xref="WormBase:WBGene00142045" mRNA join(<125673..125756,125805..126065,126114..126233, 126279..>126425) /locus_tag="CAEBREN_03320" /product="hypothetical protein" /db_xref="WormBase:CBN03320" /db_xref="WormBase:WBGene00142045" CDS join(125673..125756,125805..126065,126114..126233, 126279..126425) /locus_tag="CAEBREN_03320" /note="contains similarity to Interpro domain IPR007714 (Protein of unknown function DUF667)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53162.1" /db_xref="InterPro:IPR007714" /db_xref="WormBase:CBN03320" /db_xref="WormBase:WBGene00142045" /translation="MFHNTFQSGLLSVLYSIGSKPLQIWDTQIKNGHVKRITDEEIQS LVLEIMGNNISTAFISCPVDPEKTLGIKLPFFVMVVKNMNKYFSFEVQIIDDKKIKRR FRASNYQSATRVKPFICTMPMRMDEGWNQIQFNLSDFVKRAYGTNYVETLRIQIHANC RIRRVYFADRLYTEDELPAEFKLYLPIRGQISTQSPAFAMTSE" gene <130586..>136759 /gene="Cbn-pitp-1" /locus_tag="CAEBREN_15553" /db_xref="WormBase:WBGene00154278" mRNA join(<130586..130663,132130..132262,132710..133200, 133288..133534,133621..134138,134191..134409, 134597..134693,135187..135310,135381..135699, 135750..136467,136512..136605,136690..>136759) /gene="Cbn-pitp-1" /locus_tag="CAEBREN_15553" /product="CBN-PITP-1 protein" /db_xref="WormBase:WBGene00154278" CDS join(130586..130663,132130..132262,132710..133200, 133288..133534,133621..134138,134191..134409, 134597..134693,135187..135310,135381..135699, 135750..136467,136512..136605,136690..136759) /gene="Cbn-pitp-1" /locus_tag="CAEBREN_15553" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR013209 (LNS2, Lipin/Ned1/Smp2), IPR004177 (DDHD), IPR001666 (Phosphatidylinositol transfer protein)" /codon_start=1 /product="CBN-PITP-1 protein" /protein_id="EGT53171.1" /db_xref="InterPro:IPR001666" /db_xref="InterPro:IPR004177" /db_xref="InterPro:IPR013209" /db_xref="WormBase:CBN15553" /db_xref="WormBase:WBGene00154278" /translation="MLIKEYRILLPMTVQEYRIAQLYMIQKKSRLDSHGKDSGVEIIS NKPYTDGPGGCGQYTFKIYHVGSRIPAWIRTVLPTNALEAHEEAWNAYPVTKTRYSTP MMDRFSLEVETLYFDDYGQQENVFNLNEKEKANRIIDYMDFVKDPMGSHDYCVEEDPK LYHSEKTGRGPLTDDWVTDHRKKGLPIMCAYKLCKVEFRYWGMQTRAERWIHDLALRN TMMRAHRQAWAWQDEWTGLTMNDIRKLEAEAALHLSKVMAVKEDEDGKNEENDTDEDD DGDAVSDDLYFDCCDTSPIPTQKPSIIRWSSELELEIQDDNSPPLTPHNGSTDIALLI MVFHGDFSPDNPADSKTTDTNTFGSTIETCVQRHYPQLKNRLQIVNVSCGSEMTQVVS KLSNISPSFGLLHPSLSLMLPSAGHLYNEAVEGTIRRANETYNDFIASQPLFNGEVFV VGDCVGGIFLYEAMTRKCDSMAFLKRLSSNVSSRIIKEDQSPHQSMTDITITDTSSIS SCPQQHSIHNQSARDHSSLQNGHSSRRSARNYSAPPSASYVRKKISLVSVDSVSFGAS RLNFQPSTIFLLGCPLGLTLMQRRLEGSEIDGFDSCQLFNLYYPLDPCGARIEPVLDS QLAFVPPYNVPKYQRYPLGDGKTQKFEPSIDTSQMWGSKRIDNLLYCPNSMVALPSSA LPNILHASYWESCDVASFLLRQFVRGEECVLTTLSSSMNNIPLNIDLPTMHWKRRRTR FKIGNLSANHRANDILVTAGMDLTVTAKFCYGPMDLVSLSREPVSVFVCPQRGDWYLH GVFDTDSHGRLTIQLAKTLPCGIHSIKIVVHGDRSYLDAFVAIVPHGTKCAVFSVDGS LTASVSVTGKDPRVRPGAVDVVRYWQEQGYLIIYLTARPDMQQRVVSSWLAQHNFPHA LLFFNNSFSTEPLKQKSLHLRHIVDMGADIHVAYGSSKDVSVYTSAGVDPEHVICVGG SKRRHCVQIDNYSSHLSALNSGQCSLGQRIEDDGLTLQLHRNVQRTPSFTPRGGKFEN EKDRR" gene complement(<138324..>140231) /locus_tag="CAEBREN_16476" /db_xref="WormBase:WBGene00155201" mRNA complement(join(<138324..138544,138897..139005, 140193..>140231)) /locus_tag="CAEBREN_16476" /product="hypothetical protein" /db_xref="WormBase:CBN16476" /db_xref="WormBase:WBGene00155201" CDS complement(join(138324..138544,138897..139005, 140193..140231)) /locus_tag="CAEBREN_16476" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53183.1" /db_xref="WormBase:CBN16476" /db_xref="WormBase:WBGene00155201" /translation="MSAKQSIDSQAEPVVLRLILVSGKTHEFEFHPLTSAHDVTQMVF DQWPQDWYDDKVQSAQMLKLIYHGRFLHGSVTLHALQLMPGKTTVMHLVTRENLPEPN SSGESIYGDRCSESKNHKKI" gene <145768..>145857 /locus_tag="CAEBREN_25015" /db_xref="WormBase:WBGene00163740" mRNA <145768..>145857 /locus_tag="CAEBREN_25015" /product="hypothetical protein" /db_xref="WormBase:CBN25015" /db_xref="WormBase:WBGene00163740" CDS 145768..145857 /locus_tag="CAEBREN_25015" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53240.1" /db_xref="WormBase:CBN25015" /db_xref="WormBase:WBGene00163740" /translation="MEVNDTKNTFPFHFFFLFSFSFSRQVCHY" gene <150333..>153724 /locus_tag="CAEBREN_22617" /db_xref="WormBase:WBGene00161342" mRNA join(<150333..150339,150391..150471,150733..151236, 151610..153326,153550..>153724) /locus_tag="CAEBREN_22617" /product="hypothetical protein" /db_xref="WormBase:CBN22617" /db_xref="WormBase:WBGene00161342" CDS join(150333..150339,150391..150471,150733..151236, 151610..153326,153550..153724) /locus_tag="CAEBREN_22617" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53161.1" /db_xref="WormBase:CBN22617" /db_xref="WormBase:WBGene00161342" /translation="MKIFKLLLIGFLSTSYQQSPTSSNQPEVDEFTLLRISNAISAHV RLINAFERYSVLMQPGNMDETVQEAVRMFFFVNETYANALLKIDASYARRIVDELRKI STKGVALDNAMIAVDQLLDIYNQLHDLPPLAEKNKSFRLPSIVENPMELNVKQLEDYK NKVGDMKDTQWLPPATPPPDDGLPDKPIPSLAGPNDPASRPNSETDRTTEALKAANAI EEFHVETEKIVDQIKRSRRIQDVLDVIDPIKRRIDILSKKEQISIDDLKKMNRLVKIM KQMPSFDTASRVSEALLQLIVENGNSDFVDWNLLKKDLNDVDFGFWLNDAGNTTKLKS ILEPFWTPAEKISKLAQDVKDIARQQGTMGNIKMIHNLMLSASQLGQSADEFDSSLIT LCRVLNDSNSAPQEVSDGYNNITSALDQYLELQKEFDEFLTSENYTLLKQDAEYGRTV RSSVSRDKYESVRKNDKFKEIFNRFDGVYSRLEKFKTETQNIGKRLSSLTLADLTAKA EKWIRTTFKDTVQELEKYQKNVLRAKSGLEFVKLHQSTSSLGSFSLDVKKIQEAIQIF KEGIITTNGELEHLPDEANNEKAYYQYMIYLKDHYHPKDKMASGAILFELFHRFINGS AFDEMLKAGEELGKKIQEFPVSNETRYDLVVKMKKFDTIKDRITELKHQVLLRKGRYD GVPMDELIDLRWLIENLHDLPNPEFIKQEWMDFAEKVGTVEAADFNKTLVNTFDLDFA AHQKQVIDTYKNYRALVRYNKAVLNIEKYLVATILFNLGLYGTAILKMKKDVKRELAE EREMEYMYQKFLMNMANGEQTDYEDDDKD" gene complement(<154257..>155938) /locus_tag="CAEBREN_21549" /db_xref="WormBase:WBGene00160274" mRNA complement(join(<154257..154365,154446..154571, 154677..154818,154864..155049,155204..155340, 155571..155666,155712..>155938)) /locus_tag="CAEBREN_21549" /product="hypothetical protein" /db_xref="WormBase:CBN21549" /db_xref="WormBase:WBGene00160274" CDS complement(join(154257..154365,154446..154571, 154677..154818,154864..155049,155204..155340, 155571..155666,155712..155938)) /locus_tag="CAEBREN_21549" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019424 (7TM GPCR, serpentine receptor class sx (Srsx)), IPR019430 (7TM GPCR, serpentine receptor class x (Srx)), IPR000276 (7TM GPCR, rhodopsin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53275.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR019424" /db_xref="InterPro:IPR019430" /db_xref="WormBase:CBN21549" /db_xref="WormBase:WBGene00160274" /translation="MSAVEVSIPFIGLFIILSVVGVIGNVIVIFAIAGDRNMRKSVMN ILLLNLAVADLANIIFTIPEWISPAFFKTHDWLLPSLMCPLCRYLECVFLFASISTQM IVCIERYIAIVLPIHARRLCSRRNALITVLISWIFVALFASPYAIWHSVRAKTSEDGE LSATCTNFAGKSAWWQRYKLSEFLAFYFIPCLIIIIVYTKVARCLWCKDPTLQSETRS CLDNKLSARSIDALRTRRNVVKMLIACVAVYFVCYSPIQVMFLSKAVLNVTIHPPYDF ILLMNALAITCSASNPLLYTLFSTKFRRRLRDVVYCSPDVENETKKTYLSINNTSITG PRASFN" assembly_gap 158422..159462 /estimated_length=1041 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<160976..>161014) /locus_tag="CAEBREN_06200" /db_xref="WormBase:WBGene00144925" mRNA complement(<160976..>161014) /locus_tag="CAEBREN_06200" /product="hypothetical protein" /db_xref="WormBase:CBN06200" /db_xref="WormBase:WBGene00144925" CDS complement(160976..161014) /locus_tag="CAEBREN_06200" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53270.1" /db_xref="WormBase:CBN06200" /db_xref="WormBase:WBGene00144925" /translation="MRLILRWVQFPW" gene complement(<165998..>166954) /gene="Cbn-cyn-9" /locus_tag="CAEBREN_09210" /db_xref="WormBase:WBGene00147935" mRNA complement(join(<165998..166369,166444..166647, 166693..166820,166861..>166954)) /gene="Cbn-cyn-9" /locus_tag="CAEBREN_09210" /product="CBN-CYN-9 protein" /db_xref="WormBase:WBGene00147935" CDS complement(join(165998..166369,166444..166647, 166693..166820,166861..166954)) /gene="Cbn-cyn-9" /locus_tag="CAEBREN_09210" /note="contains similarity to Pfam domain PF00160; contains similarity to Interpro domain IPR002130 (Peptidyl-prolyl cis-trans isomerase, cyclophilin-type)" /codon_start=1 /product="CBN-CYN-9 protein" /protein_id="EGT53313.1" /db_xref="InterPro:IPR002130" /db_xref="PFAM:PF00160" /db_xref="WormBase:CBN09210" /db_xref="WormBase:WBGene00147935" /translation="MSDLTEKRVFFDIALDEQPVGRIEIKLFVDKAPKTCENFRALCT GEAGRTPNNKTHLHYKGNEIHRIVKNFMIQGGDITEGDGRGGYSIFGRYFEDEKFELK HSRPYLLSMANKGPNSNSSQFFITTAPAPHCNGKHVVFGEVIKGKNVVDLIENQEVDD KSKPRAKVSISNCGELVRKMKHQKTEEGSTDLDEKQKKEEKDRIPEIPRSWLYRSETV KGRSRSPLNERHNNSKRNRSGSRDSYSSNKVDTSKWKFRQFSKFREK" gene complement(<167169..>168749) /gene="Cbn-pdi-1" /locus_tag="CAEBREN_17000" /db_xref="WormBase:WBGene00155725" mRNA complement(join(<167169..167333,167381..168187, 168234..168617,168663..>168749)) /gene="Cbn-pdi-1" /locus_tag="CAEBREN_17000" /product="CBN-PDI-1 protein" /db_xref="WormBase:WBGene00155725" CDS complement(join(167169..167333,167381..168187, 168234..168617,168663..168749)) /gene="Cbn-pdi-1" /locus_tag="CAEBREN_17000" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001393 (Calsequestrin), IPR018247 (EF-Hand 1, calcium-binding site), IPR012335 (Thioredoxin fold), IPR005788 (Disulphide isomerase), IPR013766 (Thioredoxin domain), IPR017937 (Thioredoxin, conserved site), IPR005792 (Protein disulphide isomerase)" /codon_start=1 /product="CBN-PDI-1 protein" /protein_id="EGT53218.1" /db_xref="InterPro:IPR001393" /db_xref="InterPro:IPR005788" /db_xref="InterPro:IPR005792" /db_xref="InterPro:IPR012335" /db_xref="InterPro:IPR013766" /db_xref="InterPro:IPR017937" /db_xref="InterPro:IPR018247" /db_xref="WormBase:CBN17000" /db_xref="WormBase:WBGene00155725" /translation="MTTFSLILLVAASIAAVSAESENVLVLTESNFDETINGHEFVLV KFYAPWCGHCKSLAPKYDEAADLLKGEGSDIKLAKVDATENQALASKYEVRGYPTILY FKSGKPIKYTGGRATSQIVDWVKKKSGPTVTAVESVEQLNELKEKHRVIVIGYFKDAK SEASTIFNEVADSVDDIFFTIAGSSDVATAATLSADGVALIRTDGDDSETNSIEDSEI TNTIVLKQWIHGYKLSPVTEFTHDSAQEIVGGDLKKFHFLIIKKSDPSFDETIAKFTE VAKLFRAKVIFVLLNIDVEENGRILEFLGVDAKNTPANRIVSLDDQVEKFKPQDDEDY ETFTNSYLQGKATQDLKAQELPDDWDALPVKVLVASNFHDIALDESKTVFVKFYAPWC GHCKQLVPVWDKLAEKYENNPNVVIAKLDATLNELADIKVNSFPTLKLWPAGSSTPVD YDGDRNLEKFEEFVNKYAGSDAKSQEHEEL" gene <169623..>170401 /locus_tag="CAEBREN_11997" /db_xref="WormBase:WBGene00150722" mRNA join(<169623..169748,169795..169911,169966..170097, 170141..>170401) /locus_tag="CAEBREN_11997" /product="hypothetical protein" /db_xref="WormBase:CBN11997" /db_xref="WormBase:WBGene00150722" CDS join(169623..169748,169795..169911,169966..170097, 170141..170401) /locus_tag="CAEBREN_11997" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53193.1" /db_xref="WormBase:CBN11997" /db_xref="WormBase:WBGene00150722" /translation="MRLYLAFLLIAWANAFYMKNLNEEESTFDDFQITKAEKLRSNTN SIEMFGQRVELPTWMNTAAEKTRGMFDSATHLFGKGTATSRKSSEGLMTNLKKDEATR IWFAVYLNILVVVLIYVFITIKLALLSLSEGQMERKKRNTYSSHVAFESPDYNLPLTT IATRKPRAMSIDNPASDFEIAREAREDEVVPDVTPLDYDAIPSTECDDRSF" gene <171057..>172270 /locus_tag="CAEBREN_09222" /db_xref="WormBase:WBGene00147947" mRNA join(<171057..171155,171198..171383,171430..171557, 171610..>172270) /locus_tag="CAEBREN_09222" /product="hypothetical protein" /db_xref="WormBase:CBN09222" /db_xref="WormBase:WBGene00147947" CDS join(171057..171155,171198..171383,171430..171557, 171610..172270) /locus_tag="CAEBREN_09222" /note="contains similarity to Pfam domain PF04300; contains similarity to Interpro domains IPR007397 (F-box associated (FBA) domain), IPR001810 (F-box domain, cyclin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53201.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR007397" /db_xref="PFAM:PF04300" /db_xref="WormBase:CBN09222" /db_xref="WormBase:WBGene00147947" /translation="MLACYSDAENVTNESFIQVFHRLDKKSLLNCTLACHRFADLISN DSFWIEHARMHNKQKVLPPLPWRRAVAQKKFDVNESEEVDVSNFKFNMKKMVLGGRGY SPIIPSFHSHFETARENTIRGVIRSDDFSIRASADGIRMELNGGEGCQPHPEVSQCFA YSFSTSAISIFIDLVDSGIDEWILDYVRPKIRITQKINHRHDCSARIAFAAQLNYNET QWIHEFGMRQTAGNTDNKRYKSIVKEWEQWTEDKWEDVSLEFTDYPSGMRHLTVLNEG KDGMFWKGFYGPKVANIQVEVILPDIPIVRAAAADQEKCQEDEEPSEADEPRPGFRMP LHPRRRYMWAVPPAVAREADDNE" gene <172669..>174295 /gene="Cbn-wdr-5" /locus_tag="CAEBREN_24532" /db_xref="WormBase:WBGene00163257" mRNA join(<172669..172791,173197..173448,173493..174150, 174195..>174295) /gene="Cbn-wdr-5" /locus_tag="CAEBREN_24532" /product="CBN-WDR-5 protein" /db_xref="WormBase:WBGene00163257" CDS join(172669..172791,173197..173448,173493..174150, 174195..174295) /gene="Cbn-wdr-5" /locus_tag="CAEBREN_24532" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR013979 (Eukaryotic translation initiation factor 2A, central region), IPR019781 (WD40 repeat, subgroup), IPR001680 (WD40 repeat), IPR011042 (Six-bladed beta-propeller, TolB-like), IPR020472 (G-protein beta WD-40 repeat, region), IPR015943 (WD40/YVTN repeat-like-containing domain)" /codon_start=1 /product="CBN-WDR-5 protein" /protein_id="EGT53260.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR011042" /db_xref="InterPro:IPR013979" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR020472" /db_xref="WormBase:CBN24532" /db_xref="WormBase:WBGene00163257" /translation="METTQDPSTVTEQAASQPMEQSSGSTIPTTTPVDSQVPVTGVTP PAISPSNVDNTPAPDASNSSSNQTQAANSGSSNYKLMSTMEGHTKSISSVKFSPCGKY LGTSSADKTIKVWNLTDLTCEKTLTGHKLGVNDFAWSAESRCIVSASDDKTLKIFDVA TSKMSKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVS AVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDEENPPVAFVKFSPNGKYILASN LDSTLKLWDFNKGKTLKQYTGHDNSKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTK EVVQKLEGHTQPVIASDCHPTQNMIASGALEPDYTIRLWNSEA" gene <174581..>175907 /locus_tag="CAEBREN_18678" /db_xref="WormBase:WBGene00157403" mRNA join(<174581..174661,174708..175064,175109..175720, 175767..>175907) /locus_tag="CAEBREN_18678" /product="hypothetical protein" /db_xref="WormBase:CBN18678" /db_xref="WormBase:WBGene00157403" CDS join(174581..174661,174708..175064,175109..175720, 175767..175907) /locus_tag="CAEBREN_18678" /note="contains similarity to Pfam domain PF01866; contains similarity to Interpro domain IPR002728 (Diphthamide synthesis, DPH1/DHP2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53243.1" /db_xref="InterPro:IPR002728" /db_xref="PFAM:PF01866" /db_xref="WormBase:CBN18678" /db_xref="WormBase:WBGene00157403" /translation="MVTRATQISTLVEEIANDPNLKEDLKILPSNYTFEIPKTIWKIQ STNSKYVALQFPEGLIMYSCVIADILEKYTDCDTVIMGDVTYGACCVDDYTAKSMGCD LLVHYGHSCLVPIQNTDGIAMLYVFVNIHINLSHLIDCVQENFQRKRLAVVSTVQFIP SLQTLRNTFNRDDNSIHIDIPQCKPLSPGEVLGCTSPRLDASKYDAIVYVGDGRFHLE SIMIHNPEIEAFQYDPYSRKMTRELYDHDLMRKNRMGSIEIAKTCKTFGLIQGTLGRQ GNLKVVEELETQLKNKGKNFLRVLLSEIFPEKLSMFPEVDCWVQVACPRLSIDWGTQF PKPLLYPFELAVALETISVPSDHWPMDYYSNDSLGPWTNNNEANRPKREKRKPHIVVR TEKS" gene <176113..>178408 /locus_tag="CAEBREN_14010" /db_xref="WormBase:WBGene00152735" mRNA join(<176113..176116,176171..176304,176352..176592, 176882..176998,177045..177297,177346..>178408) /locus_tag="CAEBREN_14010" /product="hypothetical protein" /db_xref="WormBase:CBN14010" /db_xref="WormBase:WBGene00152735" CDS join(176113..176116,176171..176304,176352..176592, 176882..176998,177045..177297,177346..178408) /locus_tag="CAEBREN_14010" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR013216 (Methyltransferase type 11), IPR005123 (Oxoglutarate/iron-dependent oxygenase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53234.1" /db_xref="InterPro:IPR005123" /db_xref="InterPro:IPR013216" /db_xref="WormBase:CBN14010" /db_xref="WormBase:WBGene00152735" /translation="MYFNEDKLKAIGTRFEGGKLAKKVHKSIEQLKRHDPDVQVSSEP TKFLLVSNSSILCGVSLEELEAIFLPLDEQAEFVVYPNKRSYSFVQCSSVEAAIKVRT ELHGLIPMALKGSHQPFIISYVNELPEAKKCENYRPADLGIIEDYISADYEKQLVHML INHPSVQSLKHRAVVHFGHVFDYSTNSASEWKEAEPIPQIIEDLIDRLLSDKYITERP DQITANVYEPGHGIPSHYDTHSAFDDPIVSVSLLSDVVMEFKDGANSARIAPVLLKAR SLCLIRGESRYRWKHGIVNRKYDVDPRTNRVVPRQTRVSLTLRKIRRKPCECKWKEFC DWDRKGSISISPNDYVSKLIVGEMSVPSSEDLALKLESSYVSDVYENIASHFDETRHS SWKAVKKFIDDIPRGSVLYDIGCGNGKYLIPKDGLFKIGCDMCQGLCEIALKKDCHVA RCDALSLPFRDGSADAAISIAVLHHIATFERRKKMIEEMLRVVKRGSKICVTVWSMDQ SQSEYSKMRGNKDDVGAIDSSSQTTNRLKVHDGKDFEQQDVLVPWTIDKQGETFLRYY HVFKDKEAEDLINNVDGCELISVEKEQGNYIIIARKI" gene complement(<178816..>179842) /locus_tag="CAEBREN_25120" /db_xref="WormBase:WBGene00163845" mRNA complement(join(<178816..179005,179082..179186, 179237..179317,179394..179571,179773..>179842)) /locus_tag="CAEBREN_25120" /product="hypothetical protein" /db_xref="WormBase:CBN25120" /db_xref="WormBase:WBGene00163845" CDS complement(join(178816..179005,179082..179186, 179237..179317,179394..179571,179773..179842)) /locus_tag="CAEBREN_25120" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53288.1" /db_xref="WormBase:CBN25120" /db_xref="WormBase:WBGene00163845" /translation="MEVPDEIDSLLQSSYNMMLLTKQDLTVNGSRRKLILNDLQRENK QIMALQDENRQLRETTDEYLTTMRDILESHAELETTIEMQDQNKEVDDIDNIIFEMAN TDLESRLKGKALKMQKMMDELEILRKSEHQALQLAVQANKNYKEMFKMACLSNPSAIN VLKSAMRIINEEGANAEGHAQLDTIQYEDHEGDQDSNETIIQKSDFA" gene complement(<180290..>180788) /locus_tag="CAEBREN_17431" /db_xref="WormBase:WBGene00156156" mRNA complement(join(<180290..180523,180570..>180788)) /locus_tag="CAEBREN_17431" /product="hypothetical protein" /db_xref="WormBase:CBN17431" /db_xref="WormBase:WBGene00156156" CDS complement(join(180290..180523,180570..180788)) /locus_tag="CAEBREN_17431" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53238.1" /db_xref="WormBase:CBN17431" /db_xref="WormBase:WBGene00156156" /translation="MSGVYNQSGESLITKAEIHTFSDNLPDVIASFQALYVKFQEEDG EQTTDVIEREIGDREEQKTGDNTNELSATSVILEHKMLFVKFEAASDVDSDWEDIGSQ TDHSDLSEGHYSDETTEEKQYRETRNKTKSEKKTRRMEHLNKKYQLSE" gene complement(<180995..>182030) /locus_tag="CAEBREN_02010" /db_xref="WormBase:WBGene00140735" mRNA complement(join(<180995..181165,181210..181859, 181907..>182030)) /locus_tag="CAEBREN_02010" /product="hypothetical protein" /db_xref="WormBase:CBN02010" /db_xref="WormBase:WBGene00140735" CDS complement(join(180995..181165,181210..181859, 181907..182030)) /locus_tag="CAEBREN_02010" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53319.1" /db_xref="WormBase:CBN02010" /db_xref="WormBase:WBGene00140735" /translation="MKAMCQNLTEASKCATSAGCDGTFVGAISNAFQFVCIDNLEKVS SQIACIQENAGYLQQDCETECSVQADMIDKAAKNNADQLFNMDRLCNSTSCIANCYQN NLHKYCEIGEDNVIDAIFSQFETLQEQSPFGYLQKDKQNKTGMEKLLGMMMPEECNND KMKIKIPKKIDISSKPKSVGSPPEVPKDVIGQKKTAERSQKNTTEYDDKVTLLAKSGN LSSAAIMIDGKIQTLQCQFLDTHGNPQHTPDFETLSTILSEHFNKKVPTTTQKPVSDK KGMKEMCHETTTDEPQYRNSGSMAVVSMIFGLLAMFYL" gene <182225..>183468 /gene="Cbn-syp-2" /locus_tag="CAEBREN_11656" /db_xref="WormBase:WBGene00150381" mRNA join(<182225..182284,182679..182774,182818..182964, 183007..183258,183304..>183468) /gene="Cbn-syp-2" /locus_tag="CAEBREN_11656" /product="CBN-SYP-2 protein" /db_xref="WormBase:WBGene00150381" CDS join(182225..182284,182679..182774,182818..182964, 183007..183258,183304..183468) /gene="Cbn-syp-2" /locus_tag="CAEBREN_11656" /codon_start=1 /product="CBN-SYP-2 protein" /protein_id="EGT53216.1" /db_xref="WormBase:CBN11656" /db_xref="WormBase:WBGene00150381" /translation="MLAESLATSWRTLGSLLMIMVGPETYPSVLPGMSAKPRSSLKKG SGAPDDNRRVSFASPLSSDKKDSSAHRNDHSITKVVKANRPVVKKSKPADEFVDIISL VNHQSEVIEEIFEMESKFAKQSAMTQNLTIDLANFIESIAKLSSDSTKVESQLEELSA RVANLETNISDLISQASSVCAKYESRIDARSQYSTYLLDLQKAFNAINCVKVGNPEDS HIDYDPLLKIVDQLEACVDKF" gene complement(<184173..>185447) /locus_tag="CAEBREN_05384" /db_xref="WormBase:WBGene00144109" mRNA complement(join(<184173..184223,184280..184409, 184458..184571,184616..184731,184777..184919, 184965..185385,185433..>185447)) /locus_tag="CAEBREN_05384" /product="hypothetical protein" /db_xref="WormBase:CBN05384" /db_xref="WormBase:WBGene00144109" CDS complement(join(184173..184223,184280..184409, 184458..184571,184616..184731,184777..184919, 184965..185385,185433..185447)) /locus_tag="CAEBREN_05384" /note="contains similarity to Interpro domain IPR003874 (CDC45 family)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53254.1" /db_xref="InterPro:IPR003874" /db_xref="WormBase:CBN05384" /db_xref="WormBase:WBGene00144109" /translation="MFQKVQTYFVHSTPKGLDGAQFIAVNRDGSVIYGLRIRVELSII EMPDQVPEVITTATEKTICKYHIASGYSRTFELDYDIDPLTLTRILEFYTITDNLVVL LAYDPEHYQFSQTMIFLDQKNEWAQSVAVRKKTVSRISTPPLVNLSFLDKGRVLLCGA RASEAGINERMTLSIAADPLNSFEKPDDDLSGLMEDFNKFLTSLPPDPDGKTMISLFL LNLDHEKISILLSEVDTLDPQSEPVFTTSRVGIIDRKNNHFSVEKVDNTVLSAGEPLK VTSIANMKTKNGSVWMSFSVTDVELLKTVYWRFKHLYTAHDSRFSRESLFMEV" gene complement(<185685..>188536) /locus_tag="CAEBREN_06067" /db_xref="WormBase:WBGene00144792" mRNA complement(join(<185685..185835,185886..186084, 186133..186340,186387..186845,186894..187375, 187420..187513,188371..188430,188477..>188536)) /locus_tag="CAEBREN_06067" /product="hypothetical protein" /db_xref="WormBase:CBN06067" /db_xref="WormBase:WBGene00144792" CDS complement(join(185685..185835,185886..186084, 186133..186340,186387..186845,186894..187375, 187420..187513,188371..188430,188477..188536)) /locus_tag="CAEBREN_06067" /note="contains similarity to Pfam domain PF02724; contains similarity to Interpro domain IPR003874 (CDC45 family)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53219.1" /db_xref="InterPro:IPR003874" /db_xref="PFAM:PF02724" /db_xref="WormBase:CBN06067" /db_xref="WormBase:WBGene00144792" /translation="MILENNFRQDFYNKIKKDDKSVVLIVSVDTDALCTTMILTHLLK CDDIPFSILAVEGWSTLEKIFEANQESKCNYILINCGATRSLSRLDIPPASTLFVIDS HRPFHIENVYANEQVHLLVNTNEMSELQLPEFQSVMQDESESEDEDDEDDEYVSYEQK MENVQRKAIRREEKRVWEQQRQRILWKYYESTWFSSPVCVTLLELAAEMNRVSAEIMW FSAVGLNSCYIDKLISIEMYTQICVDRMRPFVHRFTPRTIVNQGKIDDLLHITFGREL PLAIYSHWDLFSSMMVNEYFSIKTKNWTQKGDANTRHLLAQLGITLHETKQKFESLPT EQRALVVEVLEKEMDSAFATFFATLGYCGKLSACDVARAVSVRLEMPKSETLMNRFSN GQSILRSSITGERQDRLNLTHTFTSVCQRTLQVTWKSVSAAINQTEIIPNGSYYLFSC TRSIDEDMLDSRHFLYNTTGFMLSAFASMRKGRTSKPLIAMFPLTGESAGWLVVTGVM PVGTIYEDSLMKTCIGRAFERVKKSNPAIRIVADSFNSNIIRLKSEDRTRFIDLLLHT FEGK" gene <193536..>195120 /gene="Cbn-lin-48" /locus_tag="CAEBREN_00506" /db_xref="WormBase:WBGene00139231" mRNA join(<193536..193607,193660..193749,193798..193881, 193981..194287,194774..194898,194944..>195120) /gene="Cbn-lin-48" /locus_tag="CAEBREN_00506" /product="CBN-LIN-48 protein" /db_xref="WormBase:WBGene00139231" CDS join(193536..193607,193660..193749,193798..193881, 193981..194287,194774..194898,194944..195120) /gene="Cbn-lin-48" /locus_tag="CAEBREN_00506" /note="contains similarity to Pfam domain PF00096; contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR013087 (Zinc finger, C2H2-type/integrase, DNA-binding), IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="CBN-LIN-48 protein" /protein_id="EGT53166.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR015880" /db_xref="PFAM:PF00096" /db_xref="WormBase:CBN00506" /db_xref="WormBase:WBGene00139231" /translation="MDSRVWLPLIGTHLLPRDIHMITQILANNNNNALIPSSNSSINS SKPDEKNSKKFLIERFLDDEPSPTPSILSPSPKAAIPSPILNPTVEFVNGGYGVKNPL APFVNSLEQSVPSPTLSNFISSIKEESNDQLMCHICGKKFGLQRLLNRHIKCHSDMKR YLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCEQCDKSFTQRCSLESHLRKVHGVTHHY AYKERRSKVFVCEDCGYTDEQFEVYLNHIKVAHPFSAAYARFTQLQKKNSTNGKQSSG QQLATIST" gene complement(<195487..>198715) /locus_tag="CAEBREN_25965" /db_xref="WormBase:WBGene00164690" mRNA complement(join(<195487..195585,195633..196052, 196102..196302,196389..196658,196709..197011, 197066..197446,197791..197888,198124..198384, 198670..>198715)) /locus_tag="CAEBREN_25965" /product="hypothetical protein" /db_xref="WormBase:CBN25965" /db_xref="WormBase:WBGene00164690" CDS complement(join(195487..195585,195633..196052, 196102..196302,196389..196658,196709..197011, 197066..197446,197791..197888,198124..198384, 198670..198715)) /locus_tag="CAEBREN_25965" /note="contains similarity to Pfam domain PF05186; contains similarity to Interpro domains IPR007858 (Dpy-30 motif), IPR002110 (Ankyrin repeat), IPR020683 (Ankyrin repeat-containing domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53164.1" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR007858" /db_xref="InterPro:IPR020683" /db_xref="PFAM:PF05186" /db_xref="WormBase:CBN25965" /db_xref="WormBase:WBGene00164690" /translation="MSSSDTFEKLYIEQHDAPSEEQVEEWLATGEVLKLEQIVLDGRG HMLKEKKTVNAASNEFLSGLTQYLTKIDAIHKAVEEGDVRRVKSLIDRPLLSTARDNY GMTPIHKALLHGQTNTVRFLLGRFPNCVNATDHAGRTPLHYAAADPNGEHMIKVLQKS GGDAFIEDKHGHTPFYYRTHGQRLNVRSMKDNAVMNQLISGQLSRPLLQDLEEDIYDW IHTGNIGKLEELVLTGYADLLLGRNHEVEDADSIGFLEVLPQYQAKIQSIHKAVETGN LRAVKLLTDRKKLSLCRDTRGLSPLHKAIVFERTDIAKYLIRNYPQSVNAMDQKKRTP LHYAAALKDGGYLYKVMRKSGADPNIYDCNGRPAKYYLKHSGEIDLSAMRLDTRAALK QVLHNRVAPSYLESSIQQWLRDGQLAKLEQLVLSGCGDLLQSRTSSHTETQAFLDKLP EYMEKIEGIHKAIKEGNLDKVKELMKTKKLAIARDRFGCTPLHSAVVHEHTEIVRYIA GHYNSVLNAPDYNKRTAMHYAAAARDGGHYLKILGKAGADPMAVDNEGRTPDYYRRNA VIDLKLIKDRDDDFETINEEYLEDGPLIDSPGTPDSGSEGSFVDSARLLDDEDESIER HRFEKTFRGKIDLPTSENGVYLARTVAPVLTKALAEVLLRRPADPIGFIAEWLTKYVV EVPRRNGNGH" gene complement(<199190..>203553) /locus_tag="CAEBREN_08595" /db_xref="WormBase:WBGene00147320" mRNA complement(join(<199190..199281,200428..200641, 200764..200861,200907..201089,201137..201267, 201322..201416,201838..201954,202096..202165, 202298..202583,203100..203286,203330..203446, 203533..>203553)) /locus_tag="CAEBREN_08595" /product="hypothetical protein" /db_xref="WormBase:CBN08595" /db_xref="WormBase:WBGene00147320" CDS complement(join(199190..199281,200428..200641, 200764..200861,200907..201089,201137..201267, 201322..201416,201838..201954,202096..202165, 202298..202583,203100..203286,203330..203446, 203533..203553)) /locus_tag="CAEBREN_08595" /note="contains similarity to Interpro domains IPR002110 (Ankyrin repeat), IPR020683 (Ankyrin repeat-containing domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53246.1" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR020683" /db_xref="WormBase:CBN08595" /db_xref="WormBase:WBGene00147320" /translation="MSPQALKIAHPNTGSVALILAVLNGHTPIVEAILEYSLNTLNMH DNDGRTALHYAAALSGLNQDHTLYYLLTSKGAKENLPDSEGFTALDVRSNPGLIDLDR ARYTNVYPVPRETAWEVRFASKTPEDFNQEIINGTLDMSHVPNIPEHLDLIKQLTLLQ SQVLGIWDAVAAEDDRSLKQLICEKRMGMVLDRDGRTPLHHAYIKRRNELIEYLLYIC PDSANVKDRHGKTPIEYSPAVKPPPPQLLEPPPTVSDTLLVIPNRERRPSRTALLHKE RFHLPAEEKVARKQSKSDNNMSTSSSSRSRDANSPESLEPDVLNRIQNIDIKNRDYTV LEQLQIEGKGDQIWRAAKRSSERLSRHVQEFRQLQNRMSTAIDAIEKDERKKLDQSVD EEVMATRDSRGMRLLHIAVLREKHEVVEHLAITFPNQIDLTDTLGRTALHYAACQQNA IYDSLVDLGARKDLPDQDGLTAEEYRQNPTRLIRPSSAVSSVMLRSMSTDDEFFDPVE NNNYEYPVDLEVRKGLKDSKFFYSYSSL" gene complement(<204836..>206431) /locus_tag="CAEBREN_06125" /db_xref="WormBase:WBGene00144850" mRNA complement(join(<204836..205171,205217..205480, 205531..205988,206038..>206431)) /locus_tag="CAEBREN_06125" /product="hypothetical protein" /db_xref="WormBase:CBN06125" /db_xref="WormBase:WBGene00144850" CDS complement(join(204836..205171,205217..205480, 205531..205988,206038..206431)) /locus_tag="CAEBREN_06125" /note="contains similarity to Pfam domain PF00102; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53175.1" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR003595" /db_xref="PFAM:PF00102" /db_xref="WormBase:CBN06125" /db_xref="WormBase:WBGene00144850" /translation="MTVSSKQSKGKQRNAKTPKPEDTMDEDEQEPKPPVSREPMSKEP MSKETSKEKLGITAALKETKKLIQGTGNKFKLKSKEKEKDRTTRERKAPSPSTPSGEK TEREINPNSNPNAKMVAAIKGFCRYLLNMKESSLSTYFDERLAKYTPTNCTFSEWERN MAKNRSKEYKVSDASRVRLDIAGKPAYINASHIKFDPTCSEFILTQYPMKDTIHDFWR MVSQKKVNRIITIFEPYVDEAIEEFNKVPSLISPAPVSVLDSINGPVLNLTEKSQTRE QIMTVSIRCDTNQAKSSFFPLFTDHYMNLDNWLINTRKVEIDERNKNWMSLYTVEIVA EECSEASYIRVFNCTTWPWKKVPNEEKKLLALVRAPFKDESPLVAKQDKSEPIVVMCD LGLDRSATVVLTTVIIELVLAGKTPDCDALFKKMRDQRPNVFTMSIFYTYAIRAALFY LKMKHKTMGDPGGEEVNNMITEALNKVPFVSKK" gene complement(<206932..>210790) /locus_tag="CAEBREN_10879" /db_xref="WormBase:WBGene00149604" mRNA complement(join(<206932..207194,207308..207780, 207834..208360,208407..208508,208557..208661, 208708..208821,208871..209093,209341..209568, 209617..209759,210725..>210790)) /locus_tag="CAEBREN_10879" /product="hypothetical protein" /db_xref="WormBase:CBN10879" /db_xref="WormBase:WBGene00149604" CDS complement(join(206932..207194,207308..207780, 207834..208360,208407..208508,208557..208661, 208708..208821,208871..209093,209341..209568, 209617..209759,210725..210790)) /locus_tag="CAEBREN_10879" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53211.1" /db_xref="WormBase:CBN10879" /db_xref="WormBase:WBGene00149604" /translation="MGMTSMTSSNKRKPCVIDNLLEAKRTHNLSQMRQELASLNDKKS EFLRAQKRASLFVDSRRIGAPSVMNEYSNMFKKACILPMESIEEQKLLIEDIVKESVI IEWPRTFPAVYSDQPETELDFAPLIHRARNVVKCRTSHPTMRVKIFAISETNEMSCPQ VVEAFYRASLVKLGAEIPDQKFRQVAGKMILTQREGIAATKSAEQSGAVVNSEGKLLC SQSSSHAQILLFANQLNEQNIRTTSLKYENGFLCATFPEMGVTLNSMVDRRQLSTRYA IQVEVHINIDNRIIVVHSLVSHPFLIAITNDQTEPLLQSIFWNRLLNCDQHESSEYFP DKHQLPWGTLLQALRAFIKSQIPQARFLTDYELRHVQAMLLLPRILRCSSPNELHLLE VNLFGSIGNQQRDLHEEMKRLRNRLLNEPVIDNCLVERKEFITERCISILDMSTELTH TTWQWLHRATEMIQDVGHKLCPSPTCDKKSSKTKKQMAASEDYQTVISLFNKGFLTLC STQKAAVALSSIDRNSSMLMRFCDENMGHFSICYGLESGKPKIGSISAEQVKDFKQGL PEMLIDEHYPSKYHNLIRMNLEDGDDESTPAVSVRKQEIFHNYKTERRSVESVSIMDD ETSRVDVLSGALLARQSPSPQNMTHSQTFDINSFTNNNSHLPSSIFPLLHSLSGNLDI GSLLKNFNPSHEDVDPDNDTSISDASGDEAPTSSMVSLLQGSESHGEEEMNETGNLAQ LLLRQYQ" gene <213049..>214759 /gene="Cbn-tag-347" /locus_tag="CAEBREN_08828" /db_xref="WormBase:WBGene00147553" mRNA join(<213049..213243,213289..213463,213510..213606, 213655..213887,214002..214253,214305..>214759) /gene="Cbn-tag-347" /locus_tag="CAEBREN_08828" /product="CBN-TAG-347 protein" /db_xref="WormBase:WBGene00147553" CDS join(213049..213243,213289..213463,213510..213606, 213655..213887,214002..214253,214305..214759) /gene="Cbn-tag-347" /locus_tag="CAEBREN_08828" /note="contains similarity to Pfam domain PF01342; contains similarity to Interpro domains IPR010919 (SAND domain-like), IPR000770 (SAND domain)" /codon_start=1 /product="CBN-TAG-347 protein" /protein_id="EGT53320.1" /db_xref="InterPro:IPR000770" /db_xref="InterPro:IPR010919" /db_xref="PFAM:PF01342" /db_xref="WormBase:CBN08828" /db_xref="WormBase:WBGene00147553" /translation="MCDEDGMSMSPPPSLSPHPIGASFEGFKTEELERGSPLPLHSPI NLDHGPLHEDDKSAVYQIMYAQPELSDSGYIRPVTPLQITIPDGDASPTVPVSCGVVT GKMHLNLFMCPGIHQPCIEVGNDLLSPKQFTVRGDKERQKDWKASIRVGRSSLRTHME ASTIDFYDHQNRCSGKCQSRNYVNAPTDEALQARKNKRSSEAALLKNEIENEITGREA GMESGIDNEKEEKKPNMKKARGRPRGSVNKPRSLVKIEPEDDSFFEEFFTDAPPPPIP PQAEPEPLVHLVNEPAPPVMPDIKLHNECSSYGEILNCLQNDPMNFWSQMQNSGVIGH FCDDIIVSAINLKQTALEQAVTPNTANMLTRTAFSLGIQSVIVHRVQSIERNVYQQRK HDEMFMEIQAKLAEEQRLKSQQNPSTSAASDESLRTALEMSNEHDDELVDVGKYETYS EAGDTDYHHMMPGPSHLL" gene complement(<215102..>216261) /gene="Cbn-lec-4" /locus_tag="CAEBREN_12742" /db_xref="WormBase:WBGene00151467" mRNA complement(join(<215102..215344,215397..215774, 215822..215933,216030..216145,216259..>216261)) /gene="Cbn-lec-4" /locus_tag="CAEBREN_12742" /product="CBN-LEC-4 protein" /db_xref="WormBase:WBGene00151467" CDS complement(join(215102..215344,215397..215774, 215822..215933,216030..216145,216259..216261)) /gene="Cbn-lec-4" /locus_tag="CAEBREN_12742" /note="contains similarity to Pfam domain PF00337; contains similarity to Interpro domains IPR001079 (Galectin, carbohydrate recognition domain), IPR013320 (Concanavalin A-like lectin/glucanase, subgroup)" /codon_start=1 /product="CBN-LEC-4 protein" /protein_id="EGT53245.1" /db_xref="InterPro:IPR001079" /db_xref="InterPro:IPR013320" /db_xref="PFAM:PF00337" /db_xref="WormBase:CBN12742" /db_xref="WormBase:WBGene00151467" /translation="MTSHESDTPLPVPYTSRLGQPLEAGQTLNVHGKVNEGALVAEIN LLQGGGDIAPNTQVILHLKLNFKDKKMVMNSYENGVWGKEERESLPFHAGDEFDLRIR VLEESFEISADNKKIHEFKYRLPFQAIEYLSVRGEVSLNGIHWGGRFYKLPWETAFPA GHLERGQRIHLYGIPKGDRWSFDLVARNQDILFHFNPRLKEKVVVRNSHRNGFWDNEE REGEFPFKKDIGFDLTIINEEFSIQIFINRQRFGTFQHRTPNPIGDYIGLRIDGEIEV TGIEFSH" gene complement(<217834..>226631) /gene="Cbn-acy-3" /locus_tag="CAEBREN_03406" /db_xref="WormBase:WBGene00142131" mRNA complement(join(<217834..217993,218075..218537, 218589..218889,219034..219386,219441..220335, 220384..220777,220823..220954,221156..221553, 221686..221787,222111..222260,225518..225884, 226567..>226631)) /gene="Cbn-acy-3" /locus_tag="CAEBREN_03406" /product="CBN-ACY-3 protein" /db_xref="WormBase:WBGene00142131" CDS complement(join(217834..217993,218075..218537, 218589..218889,219034..219386,219441..220335, 220384..220777,220823..220954,221156..221553, 221686..221787,222111..222260,225518..225884, 226567..226631)) /gene="Cbn-acy-3" /locus_tag="CAEBREN_03406" /note="contains similarity to Pfam domain PF00211; contains similarity to Interpro domain IPR001054 (Adenylyl cyclase class-3/4/guanylyl cyclase)" /codon_start=1 /product="CBN-ACY-3 protein" /protein_id="EGT53263.1" /db_xref="InterPro:IPR001054" /db_xref="PFAM:PF00211" /db_xref="WormBase:CBN03406" /db_xref="WormBase:WBGene00142131" /translation="MGFSSEWLEQSYLNWRHAASARLIRIVLFVTSGSAFLRTLGHIP GFYALWTAAILLLSTITIIFNVLRPLRITAFQILAGIILLLDVVFSLPGYESLFPALL AVFSLYAFFSLPFYVILATSTLVSIVQTCSFLLFVEPLHTNELLAIIVVHIWTNFTGI YLCSTADRLARNAFLSARNSSEAESTAEFQSNRLNKLLSSFLPFHLINQARHQITLYK PHLYNETYSQVSVAYGRLIGFESVLAQCSSIDAARVLKELDNRIERLAAANGCTRVAS EGITAVCSIPGIDSQHATKLCRFAMELETLINSFRDATTAEVSVCIGIDSGAITAGVV GVSKWHYDVIGSVFDNALLMQSNATEPGVYVSNETRRFLGTTGEFELEKCPIGWKLYG HLPSPELFPINKRFSLVTVPQAVNRVLQSIVAMNPTLKTMGTNKKRKNEKSQEKFDMK KEKVEHSTIISVISQRFRNPGLETEYHKETDHWFIPSLAISIFFLVVYGIYHMLVMPR LITSLALIVGALTVMFFILLMLYIDYFHTFSQFITRTSAGHAVSIILIIVILFVCGIV NTVRDHFQRYHSQYYISLLFQFSCPQPNAPDVCQKAHFSTYSFAMWTITTAVFVRFPS IYLAVLLLISLLTYGLQIYVTRPSEFGPREFMTELDLSCFLISLATLVFVHSRRCEKL LRLDFLAVVKGIEETSMKDKLISLNNQMLLNLVPAHVAPGVIQKAGDVWHHSHQSVGI AYIAVSGFDLEGEAGINGLNYVFSHFDQAISNYKGVEKVKSANRFYIVAVGLLPDAAQ NVNETPWTIGELLSTLAHFIITISQFAVENEFHVQIGVDCGSTLAVVANTDQPRYEIF GETLDRSRTLMQAAGHDTTLVSEEVFLALRPRPLRFSSQPVKVAMNLNAYELITGQRE VSVEIPTMPREEQERHTQGMVEAQFASHSRMYDTQTSEMASSMASSFSSELRSIDGDA ETDSDLEWITPETALMKEPQRNHRFVMKNSDYDPYREPVHRNMRAMSAEQDYRNRRIQ SGSDMSDAECGPTTSRANSRNSCRRGWRPTSKNSLRNGFGLFRKGYSDNEQSIEAINQ IEAAANRVDRMIQELNAFGDFAEVKPLEYQPFPANFGSVKSVHRAMSSACHTEYDNAE SDAVISDVESNANSISQSRNSKSRQKRRWKDARRWHRDAADGDTESQCSSMTGSIDLD PIRWKSTHSIGYENEYEMQSDVEGLALEEMAALSRDIRNNFGDFQLATFDDIDQD" gene complement(<229343..>232299) /locus_tag="CAEBREN_29031" /db_xref="WormBase:WBGene00190996" mRNA complement(join(<229343..229456,229504..229596, 229644..230213,230261..230467,230514..230697, 230912..231240,232099..>232299)) /locus_tag="CAEBREN_29031" /product="hypothetical protein" /db_xref="WormBase:CBN29031" /db_xref="WormBase:WBGene00190996" CDS complement(join(229343..229456,229504..229596, 229644..230213,230261..230467,230514..230697, 230912..231240,232099..232299)) /locus_tag="CAEBREN_29031" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine-protein kinase domain), IPR020685 (Tyrosine-protein kinase), IPR001245 (Serine-threonine/tyrosine-protein kinase), IPR017442 (Serine/threonine-protein kinase-like domain), IPR000980 (SH2 motif), IPR008266 (Tyrosine-protein kinase, active site), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53311.1" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="InterPro:IPR020685" /db_xref="WormBase:CBN29031" /db_xref="WormBase:WBGene00190996" /translation="MSSFDSSSFDSRYPPASSPSSSSLNMLTSMSPTRPQPIPISCKS STNSISSPRPSPGEFSRHSSSQAEKSMSKKEQKSEQKRGRGTNEKSEERSENMKTAPD VDEKLQKLPDFLLTEIRTLEGVSYYHGMMARDIVETKLARCGDYLVRSTDNRISEFEF VLSVFNKKRIHSHMTIRGDQEAKKWYLGLLPENRFPSIIDLVNYFKINPLGAGLYLTR AISKGKHLISHDRITYCPKEDLLGSGNFSDVFRGKMELENVCVKVALKNSKKLNEMLD PAMNKEASKIKKEMIQEAEVMSQLRHTNITAFFGMSTDRLPILIVIEFCNGGNLEGHL KKYNSAISYAERMLYVHDASAGLKYIHSMSITHRDIAARNCLISANGFVKLSDFGMGL KIGQTPAMSSECFPNRWMAPETILKRTHFSKMTDVWSLGILTWEIYTNATKPFFELEN EEVNAALKAGKHPKTPDDIGKLIPLLLKETFKMEPHDRITGEIFHKKVHEHCEQEISL TLNGLTLNQIQGVKRERLYHWDQYVPQVVICDKNGSERGWGDAPPEMLANVVWRGEK" gene complement(<232398..>238889) /gene="Cbn-mtm-3" /locus_tag="CAEBREN_25856" /db_xref="WormBase:WBGene00164581" mRNA complement(join(<232398..232743,232943..233706, 233755..234506,234555..234883,234928..235388, 235440..235640,238586..238666,238715..238839, 238886..>238889)) /gene="Cbn-mtm-3" /locus_tag="CAEBREN_25856" /product="CBN-MTM-3 protein" /db_xref="WormBase:WBGene00164581" CDS complement(join(232398..232743,232943..233706, 233755..234506,234555..234883,234928..235388, 235440..235640,238586..238666,238715..238839, 238886..238889)) /gene="Cbn-mtm-3" /locus_tag="CAEBREN_25856" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR010569 (Myotubularin-related), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000306 (Zinc finger, FYVE-type)" /codon_start=1 /product="CBN-MTM-3 protein" /protein_id="EGT53192.1" /db_xref="InterPro:IPR000306" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR010569" /db_xref="InterPro:IPR016130" /db_xref="WormBase:CBN25856" /db_xref="WormBase:WBGene00164581" /translation="MEIPKESERTGTAAIDIGGARRGDRLDSDPANADMSYIASPSNN IGTSFVHLSPETGGGTTNGNVREAKATVHEDNCSFLNHQRQSMTVLEEESESQNMRIS LTEVVMLPGEDRARLPCGTVEWPIVGGLIFLTNYRVVVALNNPDDTKRYLVFPLQEIE QVDFAPPEAINLQMKGGRVFRIMFPPEKNSDAPLIHKLINTAFQRLNRHITSLYLSKP QEWTSNGTDNPMQSLNVFAWKFSEAVDELEKKGELPSWLKRSDSIANEITHIDFNRLG MSEHFQITSVNEDFEVCPTYPEKIIIPKGITDDEVKAGAKYRSISRFPAVVWRCQKTR AVLLRSSQPQVGILAWRNSTDEKIIEEAVKASRIEGEEKKQFIIMDARGYTSAFANRA RSGGFENTEYYQQAKLEFLGLPNIHTVRTAFAHVRSMLHSQVPTEQLLTTLQSTGWLS NLSSLLVQSANCADHLSKGHSVLVHCSDGWDRTTQVTTLAKIILDEHYRTIEGFEQLI RRDWIAFGHKLYDRQQIGVSGWGEGGERSPIFLQFLEAVRHLQREQPTLFQFSHAYLI KLAKHAYSGLFGTFIFNSHKERREATEKWNGTLVDIWRFIGAHNEEFVNQAYDEKYIG PMKPVNLSVIKLHVWHEVFADEGEGHTLIYNKEERPSSGCSTPMAASAAGNMVKSKSS ESINSLNVDGSLKDNHQERFASACSPSTVSADTSLPMSTSFHQQSIHQCAVSGIAAID SDGLIRFEDDVQAMLRKKNKAKEEAIRLRDQQIEELRKRAIMEKNLASPGQSLCHPES DTETTSTRLERAMSDLSMVDPEKELPNFRPNTTWETAATNCRLCDKEFVKMSVYTEDR QHHCRNCGRVVCEECSKHRYAVIEEGQSVQKRVCDICYESMHEPEGRINSDPNSTTIQ SSSSTVNQNDPGSVNCSDNRENLDLAVSNVVLKTEEADGPIKEADGPIKEADGPIKEA GSPTKKNVSPKKALAKGLQKLKKTIFGKKKEFDVPVAQSPPPEHDLDL" gene complement(<240574..>242235) /gene="Cbn-xbx-5" /locus_tag="CAEBREN_09315" /db_xref="WormBase:WBGene00148040" mRNA complement(join(<240574..240717,240996..241207, 241252..241529,241575..241715,242162..>242235)) /gene="Cbn-xbx-5" /locus_tag="CAEBREN_09315" /product="CBN-XBX-5 protein" /db_xref="WormBase:WBGene00148040" CDS complement(join(240574..240717,240996..241207, 241252..241529,241575..241715,242162..242235)) /gene="Cbn-xbx-5" /locus_tag="CAEBREN_09315" /codon_start=1 /product="CBN-XBX-5 protein" /protein_id="EGT53269.1" /db_xref="WormBase:CBN09315" /db_xref="WormBase:WBGene00148040" /translation="MNFALFGIDIHQVKDIGEAIKMFDFIIFRNSVFKSIMLCSFIFV VVWGGFLMASGLVCCIKRDRRMTRCELTMRTGISCAVAIIFSMAFYNGAFDIHDKMKY TPNFPFLLLNIGHLFFILTLVYGAMKIKNIDDPTDNQADAIRQLQSLQIFGLIVSVPL CYMEFQMFSFHSPRFMFSDYESFVRLIFLAAILLLEPYNSRFRFRERFYRTTSHESPI APAPEAVQVVKSLPKKMNIDDMPPQYQSSAPPAYETARNLPASWTISPSSKEYTGAQI TPVETK" gene complement(<243053..>246921) /gene="Cbn-toh-1" /locus_tag="CAEBREN_02005" /db_xref="WormBase:WBGene00140730" mRNA complement(join(<243053..243167,243347..243468, 243529..243617,243665..243790,244515..244974, 245472..245551,246108..246195,246757..>246921)) /gene="Cbn-toh-1" /locus_tag="CAEBREN_02005" /product="CBN-TOH-1 protein" /db_xref="WormBase:WBGene00140730" CDS complement(join(243053..243167,243347..243468, 243529..243617,243665..243790,244515..244974, 245472..245551,246108..246195,246757..246921)) /gene="Cbn-toh-1" /locus_tag="CAEBREN_02005" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000859 (CUB), IPR013032 (EGF-like region, conserved site), IPR001506 (Peptidase M12A, astacin), IPR006026 (Peptidase, metallopeptidase)" /codon_start=1 /product="CBN-TOH-1 protein" /protein_id="EGT53233.1" /db_xref="InterPro:IPR000859" /db_xref="InterPro:IPR001506" /db_xref="InterPro:IPR006026" /db_xref="InterPro:IPR013032" /db_xref="WormBase:CBN02005" /db_xref="WormBase:WBGene00140730" /translation="MTNSLVLILAPLALAAIGEAAFGNSSKIFEIPGLEVMASDKYPH FTTIETVSRTKVHRHRREVIAGPIYDWNSYEIPFQIWGGDYNFQSLIRRGIRMWEEST CLRFRENMQSRDAIRYVLEKGDSCFTEYIGKNGGHQDIIIGSECAEEYVVAHETGHAL GFWHTHQRPDRDRHISINWKNVMEEATASFMPFRSMLQAFGIRQVSPRRVPYDYGSLM HYHAVAHAVKVSDFTIVPKELKYVTTMGTEKMAFLDAKVINDIYCPNACHGRNHINCL AGGYPDPNNCNVCRCPEGLGGADCGRLQPSPCGGEIHASDQWQTLSSPSGRDVHCYWR ISVPDGSRVRFRLSDGEFPCSYGCQSYVEIKHKLDVRLTGFRSCCYRPKEDTVSESNQ IFVIYHPNGRTARFSLRFRRQA" gene <251159..>253152 /locus_tag="CAEBREN_08701" /db_xref="WormBase:WBGene00147426" mRNA join(<251159..251223,251280..251631,251689..251883, 251927..252522,252567..252652,252696..252917, 252963..253027,253072..>253152) /locus_tag="CAEBREN_08701" /product="hypothetical protein" /db_xref="WormBase:CBN08701" /db_xref="WormBase:WBGene00147426" CDS join(251159..251223,251280..251631,251689..251883, 251927..252522,252567..252652,252696..252917, 252963..253027,253072..253152) /locus_tag="CAEBREN_08701" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53292.1" /db_xref="WormBase:CBN08701" /db_xref="WormBase:WBGene00147426" /translation="MTDNFNYGHRMDFEKLHQHRFNDKVFSSDSMTSSASMQSSFGTH WKKVDSSIKGASIPSKTTTIPSKPTTLAPSLFSSYSTSSTIAPPMNSSASSAASSDST ATFNSNNTTSSLLEHTETREARQCLDLQMEGLDELKTTLNRCSEQFKDNYRRQKVEFD GMKKEEEVQWKTFEQFENCLDEEIQEGITGYERKVEKLCDTINLGLQAIRVKEKIENF VREWEELHSSSNNMLRMISNDEERLAHICQILNLNRTKTAPITTIEGGDSRSEQVYQS LVKMVRDLPLNDSEHANFNAVIQKIEQSQIGSKTKCEMIIQVLITTMGAWEKKSNSMS TFDSADWKSVVSVQSENNTSENGTIFGSSSFALTDPVNLDSNLSDLEGDLRSARIRKA VEGPKQIYELSPWSDASNFSQLSADSCSLSSIQSLGEPNRFTQSLRSTENLNTALSAS SPVSPRPPRSVVDKTPVLQSGIGAGTYSDPYDFGNISHSSLKDIIDQALHTAKDGLES PSTHLLARLQNSEDGFDFKDLVTAISSSSECLSDTQSSHHSSIIH" gene <254522..>255798 /locus_tag="CAEBREN_07497" /db_xref="WormBase:WBGene00146222" mRNA join(<254522..254596,254642..254680,254721..254837, 254883..255014,255057..255291,255391..255452, 255496..255605,255654..>255798) /locus_tag="CAEBREN_07497" /product="hypothetical protein" /db_xref="WormBase:CBN07497" /db_xref="WormBase:WBGene00146222" CDS join(254522..254596,254642..254680,254721..254837, 254883..255014,255057..255291,255391..255452, 255496..255605,255654..255798) /locus_tag="CAEBREN_07497" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53324.1" /db_xref="WormBase:CBN07497" /db_xref="WormBase:WBGene00146222" /translation="MSFSKSRLFEPSYIWKNQKEITEKKGILSRILGLKSDEKSGKNK SHGKYQELNESSEDTEKKTFGSVLKIISSKNGKFSVNWQNENEKIKLLEISEHEMSTV FFETLQKSNFCIGELFLCLEKGKSNSGFLMTHELPQISVGKLYMRMETFEMVEWWMRR ISSIDLTDLSISPFGDHPINLTDELFEMPHVTPCCHYSKIPHFSFYSDNISESVVKAA VESKMSSVNGDYVLEWFFARRVNTEDVLQEVVRPSCERKERFSHQKQCFEPVDVYPVS NENNKKLSLMIVKDPSDHFNPYSLVLFS" gene <256432..>258819 /gene="Cbn-plk-1" /locus_tag="CAEBREN_24396" /db_xref="WormBase:WBGene00163121" mRNA join(<256432..256677,256722..257321,257541..257689, 257733..257910,257954..258400,258449..258562, 258607..>258819) /gene="Cbn-plk-1" /locus_tag="CAEBREN_24396" /product="CBN-PLK-1 protein" /db_xref="WormBase:WBGene00163121" CDS join(256432..256677,256722..257321,257541..257689, 257733..257910,257954..258400,258449..258562, 258607..258819) /gene="Cbn-plk-1" /locus_tag="CAEBREN_24396" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine-protein kinase domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR020636 (Calcium/calmodulin-dependent protein kinase-like), IPR001245 (Serine-threonine/tyrosine-protein kinase), IPR017442 (Serine/threonine-protein kinase-like domain), IPR000959 (POLO box duplicated domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /codon_start=1 /product="CBN-PLK-1 protein" /protein_id="EGT53180.1" /db_xref="InterPro:IPR000959" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="InterPro:IPR020636" /db_xref="WormBase:CBN24396" /db_xref="WormBase:WBGene00163121" /translation="MNRMPNIAKPPAKSSQRKEKAPPEVPAIITDKERGTYYEKGRFL GKGGFAHCYELTNRSTRDVVAGKVVPKTMLVKQYQRDKMTQEVQIHRELCHPNIVKLF HFFEDSLNVYITLELCARRSLMELHKRRKAVTEPEARYFTHQVVEGVLYLHDLKIIHR DMKLGNLFLNDDLVVKIGDFGLATTVDGDERKKTLCGTPNYIAPEVLNKMGHSFEVDI WAVGCILYILLFGQPPFESKSLEETYSRIRHNNYTIPSVASQPAASLIRKMLDAEPTR RPTAKQVHRDIFFKSGFMPTRLPVSCLTMVPKFGGHETSMMEENVAPRGVDPRGQRPL NGRAGLATLPQHMITNNAERERAQQQAAEATFREPEDAYLSQLFHQVAVLLEQRIPGI EEEEAALDGYQSPECLPVFWISKWVDYSDKYGIGYQLCDNSVGVLFNDNSRIMLDQAG NELTYIEKSNKEHYFSMHSGDIPQALNKKVTLLKYFRSYMNDHLVKAGEGSEQRAGDD LARLPTLRVWFRTKSAIVLHLSNGTVQINFFNDHVKMMMCPLMQAVTFIDQNKRMLTY KLSNLQRNGCPEKFLHRLKYAKTMIERLMSDANMVAQNPSRNPDMPRQMGSARSASAG SRGPIHTGSHLPQSASGSNIHPRR" gene <259417..>261177 /locus_tag="CAEBREN_09031" /db_xref="WormBase:WBGene00147756" mRNA join(<259417..259500,259546..259649,259694..259880, 260035..260271,260319..260516,260567..260701, 260749..260882,260970..>261177) /locus_tag="CAEBREN_09031" /product="hypothetical protein" /db_xref="WormBase:CBN09031" /db_xref="WormBase:WBGene00147756" CDS join(259417..259500,259546..259649,259694..259880, 260035..260271,260319..260516,260567..260701, 260749..260882,260970..261177) /locus_tag="CAEBREN_09031" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53213.1" /db_xref="WormBase:CBN09031" /db_xref="WormBase:WBGene00147756" /translation="MDEENSFFNCDFDSELFEEPLDKKASKQEKLDLLEFIGGFEKWN LLADDCKMYIVGLLDYWSRCNLSLCSKKDNQIVKETILFITNGKLPKDDGIRMRPRNL AALCKSDFEQNNTEQAVVNVIVLRENFIEIQTSNNFKRSWKVTQKGDDCLVLSKSSLK SQFTYSNPHKISNSSAEEEFTKIVNKVMENHGTTVKKLAVLNKWNLQCDAFTKLDSLK SLDIYYQNVEDVQYWVDHLNPDVPLNSFALGHQFWWEFGRKLFPFEILQHPSIMTSYD LNVKLRLNITDEQFLSMKCPRMKFHTEMLSFEVLYEFIRRWVDDEIDYDFRKCYIGTG VNYRPHFEKLVTDFGAVEYNYRSHRTPQYEEFFVHFDKYSTSQANFYQINRRNDPYNS ISVLISFDLFLVLRTGFPSTRMGRPFMKLVFPEEDL" gene <261346..>262006 /locus_tag="CAEBREN_04136" /db_xref="WormBase:WBGene00142861" mRNA join(<261346..261489,261537..261874,261928..>262006) /locus_tag="CAEBREN_04136" /product="hypothetical protein" /db_xref="WormBase:CBN04136" /db_xref="WormBase:WBGene00142861" CDS join(261346..261489,261537..261874,261928..262006) /locus_tag="CAEBREN_04136" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53227.1" /db_xref="WormBase:CBN04136" /db_xref="WormBase:WBGene00142861" /translation="MESSQILLLFFLISSPLLLVMCKPKGKEDSRKVERSRATVDARS RGKKKKSSETAIEIKPVKTPESKKTAVKEQVTQETPSKEPTTNAAKTNTKKKSASKSN ERTVTKTVGTTEEYNTKDEVTAPDTSEKKNKTDCKTAEEKALSTQRTQDGSVETTKKK RKPKTEEYLDSQGDDDTLRCVKSICN" gene <264608..>266349 /locus_tag="CAEBREN_00100" /db_xref="WormBase:WBGene00138825" mRNA join(<264608..264694,264827..264965,265016..265116, 265399..265535,265583..265722,265766..265866, 265962..266082,266129..>266349) /locus_tag="CAEBREN_00100" /product="hypothetical protein" /db_xref="WormBase:CBN00100" /db_xref="WormBase:WBGene00138825" CDS join(264608..264694,264827..264965,265016..265116, 265399..265535,265583..265722,265766..265866, 265962..266082,266129..266349) /locus_tag="CAEBREN_00100" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53255.1" /db_xref="WormBase:CBN00100" /db_xref="WormBase:WBGene00138825" /translation="MAVVASTSDDFYANYAFETSDRKDDNSIRVPRNTTENRRLKYGH AEDDNSDIAYLNFPVLVPSILFSVISMGCFIGAILTSLKTDYIPDERELIRGYVIEYG SSRFRCNSTIPFPADGLPSILNLFELNVIGNVLFRYAVCIPIVIRVFNALTIRNLLRH EYSTKFSSLHKVMADSMPIFTFVEALMMALFSIVTVHEDFPEANRFFKIVFAMSSVVN MLTTTTVMFAFSSNSESKWDTTSMIMKLISVVIYVYFMPQYIQYHQSSITFPICHSYM PQLFALMEYAIIIAYATFHLSFLIDIRNISFICFPRSASGECEPIDPINFKKGAKYEH CRAFEYNQRRIMSL" gene 265219..265338 /locus_tag="CAEBREN_27780" /db_xref="WormBase:WBGene00188391" tRNA join(265219..265257,265292..265338) /locus_tag="CAEBREN_27780" /product="tRNA-Leu" /db_xref="WormBase:CBN27780" /db_xref="WormBase:WBGene00188391" gene complement(<266835..>275680) /gene="Cbn-gei-8" /locus_tag="CAEBREN_05348" /db_xref="WormBase:WBGene00144073" mRNA complement(join(<266835..266995,267091..267445, 267494..268351,268933..269190,269458..269754, 269914..270048,270097..270151,270199..270398, 270634..270783,271714..272583,272627..272990, 273075..273400,274301..274490,274544..274616, 274850..275496,275543..275629,275673..>275680)) /gene="Cbn-gei-8" /locus_tag="CAEBREN_05348" /product="CBN-GEI-8 protein" /db_xref="WormBase:WBGene00144073" CDS complement(join(266835..266995,267091..267445, 267494..268351,268933..269190,269458..269754, 269914..270048,270097..270151,270199..270398, 270634..270783,271714..272583,272627..272990, 273075..273400,274301..274490,274544..274616, 274850..275496,275543..275629,275673..275680)) /gene="Cbn-gei-8" /locus_tag="CAEBREN_05348" /note="contains similarity to Interpro domain IPR001005 (SANT, DNA-binding)" /codon_start=1 /product="CBN-GEI-8 protein" /protein_id="EGT53206.1" /db_xref="InterPro:IPR001005" /db_xref="WormBase:CBN05348" /db_xref="WormBase:WBGene00144073" /translation="MESFKPLAREYDVKFEAFQKGLREWEETPERKEYAEYHRVQAEE LFTELKKEREDRERWERAEKIRGDDEKIMNARHKVDEKIRQGVAKIPRLLTEEERKMD TFVERPGSVINDMKQVHRKSILDRLEQWSPEERALFKSRQADHVKIFHGITEFFVDKS ASDLVLFYYMNKKTEDFKKDFKAKKRSTKYKVGAYPTAEELAYYRMMPPLDYSAFPKN SLMCYFCCQTVNGVDLDGTFMPKEAYEIFAISPDEERVICTRCREEAAKLYKDNRCFG NRCSNQKKKANRVNRNIPTDLADLPVRTRAFLLDKLGSTRVAVKFCAPCKNALIRWIA EVLKKDEVILGELMNYEGQVGWTDEEKKKLVTAINASATLDWDAISAKMNRRPNECKM QYDALNGVKAQPFIEEIDDEDTGQDDQDPLPTQPAPSTASRRSGLARSAKKAPRTPRA TRPTNRRAGGAITRAQAVPKPAEDLGEEIDEMELEDNDDDGSSGSNEKGSKAPSIRDG SPTEMLEDDSPEGQDQDLDEEEDDEASRDVDSAITTLLSPKILSGGMKPDFPSSRVQK PSISEPTLEPMETAGSGNPSDDEDEEGTLHIDVDDEPPAKRPTPTSSSSHLLGSLNSG DDAVHEHGGRGHLLQQQSQPESVAAPVTVTTTTATAQRHVDSTPPFSPVVSQQVLPTE TNESVPLVVPVAQPPTIFVSGTAPAAAPQAAQSPMPIAQPVAQPLPQRVSTPAQILTP TPVRPTATPTPSAPMEQYLGMIRPSQPQQPGINQNVLANYILQHHPQAQLAQLTQAQL AQLAQAQHAQIAQAQQAQLAQAFQAQTQAHAHAQKQAQAQIQPSAQGSLTSGTPIQQQ SLTPSEPLTSSTPPVHRPRAATTGGSTKTVKSNNVQEAELRILRNHVLMSLNIVREGF EEEKKYKNEEAQLMAVAHTQKNSGHGVPEVTNILNTRFKNLEDQRNQLKRRTDEHLKF VEEFLRKYPDYTIFNLPELDRSLLVELNQRFIEKEREVRNASINAQQLAALRGNPIGI RHPDSYTTPSQVHQNNLHQSQQQAFHYQQQQHQGVPHQLHVSNQKRKYEHSNSKRSAP SSHSASAQASPTVAIVPSSSQSIQQPLQYQMGKGQNEMAAAFQKKMTDREKLLAEQKS MMRGLPQQTLHQQHHLQQQQIHAAPTQQEPKSKRKSGIESITSMQTAPQRHVQLAGPT ARNRVVSPALSTRSVPFDSMKELSKIPHQQLLQAKATSNNSNAASPANTSNSDDIEFL WEGTSTQTKESSFFKKTVLPSDNVSTAVGRSIKLKLEMPTEVGSLPDATNDAEAMECL ALILHHEEKKTEKSFTNLIEKEQRKHPKNLPIPYLEVYREVQKQYEKHTTLKKNQNSM PTPAPKAIAAPVPVPNAVMKTQEIEAQALSQTQLLLPILAQMAHHNPQVNQQQLAQLA QHNPAAFQQVLVQVMAIQKEQQEQEALKQKQQQQLLLQQQQQQQQQQKLQQKQQQQAM SKSDNYEKFNLLRPDCIVRPTPTTGPMFPNFFPNSSVSTMASSSSAPHFIHQPTPMLA APAVAPSAPVIIPKATPSVAVQTAPPVPRVAPVISEKPSSINSNGSDGSSEDDDRSKI ELELPANRRPAPFGDKNAPRSVIDLRALMTCTPKTVFNKVPLKESAANIRFTGPCKNL QYEDLSDDE" gene complement(<280733..>281387) /gene="Cbn-rpl-21" /locus_tag="CAEBREN_26073" /db_xref="WormBase:WBGene00164798" mRNA complement(join(<280733..280976,281146..>281387)) /gene="Cbn-rpl-21" /locus_tag="CAEBREN_26073" /product="CBN-RPL-21 protein" /db_xref="WormBase:WBGene00164798" CDS complement(join(280733..280976,281146..281387)) /gene="Cbn-rpl-21" /locus_tag="CAEBREN_26073" /note="contains similarity to Pfam domain PF01157; contains similarity to Interpro domains IPR018259 (Ribosomal protein L21e, conserved site), IPR001147 (Ribosomal protein L21e)" /codon_start=1 /product="CBN-RPL-21 protein" /protein_id="EGT53261.1" /db_xref="InterPro:IPR001147" /db_xref="InterPro:IPR018259" /db_xref="PFAM:PF01157" /db_xref="WormBase:CBN26073" /db_xref="WormBase:WBGene00164798" /translation="MTNSKGLRRGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKT NGAFQKGMPFKAYHGRTGRIFNVTKGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCR TDFLNRVKSNDEKRKAAKSAGQPVPALKRLPVAPRAAHTVTTQNNEPELLAPLRFEIV A" gene <281952..>282717 /locus_tag="CAEBREN_06310" /db_xref="WormBase:WBGene00145035" mRNA join(<281952..282080,282706..>282717) /locus_tag="CAEBREN_06310" /product="hypothetical protein" /db_xref="WormBase:CBN06310" /db_xref="WormBase:WBGene00145035" CDS join(281952..282080,282706..282717) /locus_tag="CAEBREN_06310" /note="contains similarity to Pfam domain PF05365; contains similarity to Interpro domain IPR008027 (Ubiquinol-cytochrome C reductase, UQCRX/QCR9-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53242.1" /db_xref="InterPro:IPR008027" /db_xref="PFAM:PF05365" /db_xref="WormBase:CBN06310" /db_xref="WormBase:WBGene00145035" /translation="MSLGTIVYNTVSRRFSTILLASAFGAYAFNYTLDGLTNFYWDTV LR" assembly_gap 284303..284600 /estimated_length=298 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <284670..>286629 /locus_tag="CAEBREN_15726" /db_xref="WormBase:WBGene00154451" mRNA join(<284670..284860,284912..286475,286528..>286629) /locus_tag="CAEBREN_15726" /product="hypothetical protein" /db_xref="WormBase:CBN15726" /db_xref="WormBase:WBGene00154451" CDS join(284670..284860,284912..286475,286528..286629) /locus_tag="CAEBREN_15726" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001393 (Calsequestrin), IPR012335 (Thioredoxin fold), IPR005788 (Disulphide isomerase), IPR013766 (Thioredoxin domain), IPR017937 (Thioredoxin, conserved site), IPR005792 (Protein disulphide isomerase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53321.1" /db_xref="InterPro:IPR001393" /db_xref="InterPro:IPR005788" /db_xref="InterPro:IPR005792" /db_xref="InterPro:IPR012335" /db_xref="InterPro:IPR013766" /db_xref="InterPro:IPR017937" /db_xref="WormBase:CBN15726" /db_xref="WormBase:WBGene00154451" /translation="MLFDRRLLALVALFCLSSVHCDEAATDEELNYEMDEGVVVLTDK NFDAFLKKNPSTLVKFYAPWCGHCKHLAPEYEKASSKVSIPLAKVDATVETELGKRFE IQGYPTLKFWKDGQGPTDYDGGRDEAGIVEWVESRVDPNYKPPPEEVVTLTTENFDDF ISNNELVLVEFYAPWCGHCKKLAPEYEKAAQKLKAQGSKVKLGKVDATIEKDLGTKYG VSGYPTMKILRNGRRFDYNGPREAAGIVKYMTDQSKPAATKLAKLKDIERFMSKDDVT IIGFFATEDSTAFEAFSDAAEMLREEFKTMGHTSDPAAFKKWDAKPNDIIIFYPALFH SKFEPKSRTYNKAAATSEDLLAFFREHSAPLVGKMTKKNAATRYTKKPLVVVYYNADF SVQYREGSEYWRQKVLNIAQKYQKDKYRFAVADEEEFSKELTELGLGDSGLEHNVVVF GYDGKKYPMNPQEFDEELDENLEAFMKQISSGKAKAHVKSAPAPKDDKGPVKTVVGSN FDKIVNDETKDVLIEFYAPWCGHCKSFEPKYKDLAQALKKTQPNVVLAKMDATINDAP SQFAVEGFPTIYFAPAGKKGEPIKYSGNRDLEDLKKFMAKHGVKSFQKKDEL" gene <288166..>288843 /gene="Cbn-hsp-12.2" /locus_tag="CAEBREN_18379" /db_xref="WormBase:WBGene00157104" mRNA join(<288166..288243,288296..288409,288703..>288843) /gene="Cbn-hsp-12.2" /locus_tag="CAEBREN_18379" /product="CBN-HSP-12.2 protein" /db_xref="WormBase:WBGene00157104" CDS join(288166..288243,288296..288409,288703..288843) /gene="Cbn-hsp-12.2" /locus_tag="CAEBREN_18379" /note="contains similarity to Interpro domain IPR001436 (Alpha crystallin/Heat shock protein)" /codon_start=1 /product="CBN-HSP-12.2 protein" /protein_id="EGT53179.1" /db_xref="InterPro:IPR001436" /db_xref="WormBase:CBN18379" /db_xref="WormBase:WBGene00157104" /translation="MSAIEVTADAASTWDWPLQHNDGVVKVHNTKEKFEVGLDVQFFT PKEIEVKVSGQELLIHCRHETRSDNHGTVAREINRAYKLPDDVDVSTVKSHLATRGVL TITAAKKA" gene complement(<289211..>293544) /locus_tag="CAEBREN_17904" /db_xref="WormBase:WBGene00156629" mRNA complement(join(<289211..289378,289424..290308, 290357..290549,290597..291035,291089..291240, 291312..291415,291459..291735,291806..292072, 292121..292395,292440..292598,292643..292864, 292911..293205,293256..293379,293424..>293544)) /locus_tag="CAEBREN_17904" /product="hypothetical protein" /db_xref="WormBase:CBN17904" /db_xref="WormBase:WBGene00156629" CDS complement(join(289211..289378,289424..290308, 290357..290549,290597..291035,291089..291240, 291312..291415,291459..291735,291806..292072, 292121..292395,292440..292598,292643..292864, 292911..293205,293256..293379,293424..293544)) /locus_tag="CAEBREN_17904" /note="contains similarity to Pfam domain PF00723; contains similarity to Interpro domains IPR008734 (Phosphorylase kinase alphabeta), IPR011613 (Glycoside hydrolase 15-related), IPR012341 (Six-hairpin glycosidase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53195.1" /db_xref="InterPro:IPR008734" /db_xref="InterPro:IPR011613" /db_xref="InterPro:IPR012341" /db_xref="PFAM:PF00723" /db_xref="WormBase:CBN17904" /db_xref="WormBase:WBGene00156629" /translation="MRSRNGSGVRLDRILFMVEQTICTHQNPITALFANQKDFPGHAW VRDNVYIAQALWALYRAYMKCADFDEDLTKAKELGFTCVKMMQSILECLMRQAEKVEL FKKFQRPLDALHSKYAVDTKGTVCGDADWGHLQMDAVSLYLLTLAQITASGLQVVRNF DEVAFIQNLVYYIETGYRTPDYGVWERGDKTNQGIRELNASSIGMVKAALQALNDVGD LFVDGSRGSVVHVLPDEIEQCSAVLSSMLPRESFSKETDAALLGIISYPAFCVEDPEL VAQTRETITTRLLGKYGCRRFMRDGYKTVLEDGSRLYYNKSELQQFEDIECEWPIFLC YLILDAMYSKQDDAVEAYWRQLEDVVVKNEQGFRLVPELYVVLKEHVSAEKAHPGTQS RVPGGATPFLWAQSLYVIICLLYEGFLSPAELDPLSRRLSVYEKRPPCEVQVTVLAES AEVQQELLAHDIHVQRVDQIDPVFTILPASALGHLLAKIGESKKLNLSGRPLDRPIGL LSTSRLYQIGNKFVIFTPQFMDSRRSHLMYDIRILTDEWSSELQYIYASWNSVSISGR PLVVLVITQGMLSTEGLSHFSNIHLNRHMKSTVIGAIKKINTGYLSGARVVMKDLSDF FRTTAVSKMEFRDKSAEEMLRSVAAEKVQFTLLTEDATEAKIEKMASPRGPRTLRRGE SVKDRSAYSLVHKASMRHRSIALDSNDADLIQLRLAYKSRPRDLHEMDSPQQSPPLGL RPLGLVKEHSSGELRQQLLKTTRRGAENETSHRDLKVEQLNEMKSDDLLDLLSETTIL EEQISIVHCLWMKFGPDYDTELGCQRITVRMLMEEVHAKACEAREWALVRLTAGLLKK QLEELSKAVTHLLVRQKQITVGMASKKEEVITCPKTNEELEKIMNRAYGDDANSFTLA QEIIVYLGSLVRTEPKLFLEMFRLRIGLIIQVLASELARLRNLSGTEAAEKLLTVSPF ELKSMIFSLLSGRLLEEYAEDGFHYSDTIRETRTGIGSFRRQIEERKSLRKSTRSVGG LEIPKEEDEDEEADEDDFQFGIWLRHRRIDGALNRVPNGFYAILWDTVHKMPHGVKIN DTILHWGLTQEMTRKEIKFALEVEEALNRIAEPEYRELVVETLWLLGRLEKLVLLEQP NIPRDRPLDVDRILHVANEIFVDHNKQLETIVLECCASPNPNNTKCDGARSICKHFYD SAPAGEYGTSHYIIRALMQLYS" gene <293952..>294780 /locus_tag="CAEBREN_09561" /db_xref="WormBase:WBGene00148286" mRNA join(<293952..294079,294138..294372,294631..>294780) /locus_tag="CAEBREN_09561" /product="hypothetical protein" /db_xref="WormBase:CBN09561" /db_xref="WormBase:WBGene00148286" CDS join(293952..294079,294138..294372,294631..294780) /locus_tag="CAEBREN_09561" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53168.1" /db_xref="WormBase:CBN09561" /db_xref="WormBase:WBGene00148286" /translation="MATRFVRKFVNRNPRNNELMSRQPVNTGYQFEKDRDLRRYIYKV ELVEGKSHREGRLVHYKDGVVISASTKEPSIANQLYSKTDTSAALNIGRVLALRCLQS GIHFAMPGATTEAIEKSQHQTYFFKALKEEGLTLKEPEHVEHSYETDKSFTWKRYPLK PTRQDKLDEL" gene <296786..>298092 /locus_tag="CAEBREN_25133" /db_xref="WormBase:WBGene00163858" mRNA join(<296786..296917,297976..>298092) /locus_tag="CAEBREN_25133" /product="hypothetical protein" /db_xref="WormBase:CBN25133" /db_xref="WormBase:WBGene00163858" CDS join(296786..296917,297976..298092) /locus_tag="CAEBREN_25133" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53277.1" /db_xref="WormBase:CBN25133" /db_xref="WormBase:WBGene00163858" /translation="MAEHVPLEDITNCPIHNIDEDNNVFSTTTTRPSRTEHRLRMLAK KFESLIKTQLMFLLSLNLIAWNHKMKCTIGVFENIKLE" gene <299863..>301212 /locus_tag="CAEBREN_23719" /db_xref="WormBase:WBGene00162444" mRNA join(<299863..299986,300034..300097,300543..300670, 300722..300819,301018..>301212) /locus_tag="CAEBREN_23719" /product="hypothetical protein" /db_xref="WormBase:CBN23719" /db_xref="WormBase:WBGene00162444" CDS join(299863..299986,300034..300097,300543..300670, 300722..300819,301018..301212) /locus_tag="CAEBREN_23719" /note="contains similarity to Pfam domain PF00635; contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53160.1" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="PFAM:PF00635" /db_xref="WormBase:CBN23719" /db_xref="WormBase:WBGene00162444" /translation="MASSSSAAMRPFGTARLTPGRATGRQQTNQNQQINTPEPMIAIA LSDMEYLMRSARSSRSSGRSERQPGCTCCCHIAAGVTVIPRVARFSVEGGLSTHTLMN HSDNRIAVKITCSDNNMYRVTPVYATVEPGQSLPLHIARITSDLIKRDRLCVNILEAD GNKEAREIFKKNANTRAPASINMALEATNDSQNHHHHHHHQE" gene <301896..>303471 /locus_tag="CAEBREN_32808" /db_xref="WormBase:WBGene00195100" mRNA join(<301896..302037,302091..302200,303388..>303471) /locus_tag="CAEBREN_32808" /product="hypothetical protein" /db_xref="WormBase:CBN32808" /db_xref="WormBase:WBGene00195100" CDS join(301896..302037,302091..302200,303388..303471) /locus_tag="CAEBREN_32808" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53236.1" /db_xref="WormBase:CBN32808" /db_xref="WormBase:WBGene00195100" /translation="MNIFSVFLIFVLLIVSIQSEPSNNIFSSIFSFGKKKPASTPAPS YSKNAGSSSRCSLQTSQCSVYECCNSDQTCLRNRCFPRLSNCPVTRDQCGNACCKTSE QCRNGKCSR" gene complement(<302410..>303095) /locus_tag="CAEBREN_20174" /db_xref="WormBase:WBGene00158899" mRNA complement(join(<302410..302652,302704..302929, 302995..>303095)) /locus_tag="CAEBREN_20174" /product="hypothetical protein" /db_xref="WormBase:CBN20174" /db_xref="WormBase:WBGene00158899" CDS complement(join(302410..302652,302704..302929, 302995..303095)) /locus_tag="CAEBREN_20174" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53272.1" /db_xref="WormBase:CBN20174" /db_xref="WormBase:WBGene00158899" /translation="MHNFSSCFKHVIANYGLHSAFLAVGLLGTICLDTYVAWRENLFL ATSEDDQYSILIYFFGSVGYFVSFQTYLETHNTVVQMVCAVLGDIIYDRPHSRPALGV LDGFVISVVHTFLLICYFIYWMAMPMDEWNPCYFYMPDFYWCKILHFFSFSVFPLSQL SVSYRVAPVLLSCQLMLTVICAFVLHRKR" gene complement(<303609..>305238) /gene="Cbn-atg-13" /locus_tag="CAEBREN_21002" /db_xref="WormBase:WBGene00159727" mRNA complement(join(<303609..303683,303733..303870, 303915..304066,304160..304539,304588..305102, 305164..>305238)) /gene="Cbn-atg-13" /locus_tag="CAEBREN_21002" /product="CBN-ATG-13 protein" /db_xref="WormBase:WBGene00159727" CDS complement(join(303609..303683,303733..303870, 303915..304066,304160..304539,304588..305102, 305164..305238)) /gene="Cbn-atg-13" /locus_tag="CAEBREN_21002" /note="contains similarity to Pfam domain PF10033; contains similarity to Interpro domain IPR018731 (Autophagy-related protein 13)" /codon_start=1 /product="CBN-ATG-13 protein" /protein_id="EGT53170.1" /db_xref="InterPro:IPR018731" /db_xref="PFAM:PF10033" /db_xref="WormBase:CBN21002" /db_xref="WormBase:WBGene00159727" /translation="MDEEYAMYKKYIRFFAVRMVQSLIQARLGDEVESKCSPYSVNTM DWFNMRVDELGEISAYLKSNIKNYPPTSTLTLEFLLYTPSGQCLPLEAWILSCSEGSD DCSRSELYHEMSTLLRSVIVSARMTPMHRLYVKKQNLESFVIMYRVFENDISSDFGKG KKTRKIGELSSKFGNISLDLHYRTSMHFEEPEIAPLTPVEDEEETKDLEKTVVDESLE TKVETRAVSECIPIADAKKRKASGSVESATSGGSSASREAAPRFVLGQSTSSEDSRHS DLQNSYDDDHKPSLADLRNHSFPFVNLLQSAYNPANGTKKNASTTCLNSPKAAEEAPT VEKVAESFRAAKIDEVVIEEDEEEELPLDSMELSEDSFVHFNQPSDFGGAPSLGNELG DYLKQLKMAPEMSEPGEIDICKMDLKTELEKINAQTANFNNFLRHVNSFSDE" gene complement(<306058..>308241) /locus_tag="CAEBREN_19466" /db_xref="WormBase:WBGene00158191" mRNA complement(join(<306058..306258,306305..306454, 306505..306755,306806..306903,307700..307911, 307957..>308241)) /locus_tag="CAEBREN_19466" /product="hypothetical protein" /db_xref="WormBase:CBN19466" /db_xref="WormBase:WBGene00158191" CDS complement(join(306058..306258,306305..306454, 306505..306755,306806..306903,307700..307911, 307957..308241)) /locus_tag="CAEBREN_19466" /note="contains similarity to Pfam domain PF03372; contains similarity to Interpro domains IPR000300 (Inositol polyphosphate related phosphatase), IPR005135 (Endonuclease/exonuclease/phosphatase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53187.1" /db_xref="InterPro:IPR000300" /db_xref="InterPro:IPR005135" /db_xref="PFAM:PF03372" /db_xref="WormBase:CBN19466" /db_xref="WormBase:WBGene00158191" /translation="MDWKINIITYNLAMKPSDSEAVHNLLNGIADDQTHLVAIGLQEV AHAETIGGAVVTWAMTIATWMNTNTRMVLLAKTFQATNQVLIFGRKQLIGQIKRIDYR FQRNTMRGLTGHKGSIGVRLQLTSPYSIVFVDSHFVHGPENNDKRIEQYHTNRTCSFP EDRSVRAAFWFGDFNFRVEEDMNTVIRKIKNGTHLELLDSREQLKRALIERDAFIGFH EQPITFEPTYRMTVGTTEPDGKRVPSWTDRVLYKGDGITGLSYTNNKKAVASDHLPVI ASFKVTAPVAPKPQWEVVFEHLPTWYRSVPLVGRFQVNPQFYKENGSYRDWIGVFPAT IDDCTTTVNWIYAATCFDEQIEGEKFRACEFSDIPVGTYRLGYFACHLNCIVGLSKVF QIIEQP" gene <307152..>307643 /locus_tag="CAEBREN_32807" /db_xref="WormBase:WBGene00195099" mRNA join(<307152..307477,307523..>307643) /locus_tag="CAEBREN_32807" /product="hypothetical protein" /db_xref="WormBase:CBN32807" /db_xref="WormBase:WBGene00195099" CDS join(307152..307477,307523..307643) /locus_tag="CAEBREN_32807" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53197.1" /db_xref="WormBase:CBN32807" /db_xref="WormBase:WBGene00195099" /translation="MKPNAKSTRGRSRSRSRGTNSSSRSSSRDLSPKSRLIQKGKAMK GPGKAKRRQRVSDSGAPVLRTVGPVTRSQAILRWQLGEARPSSFEGLPMTTRRKKTVK KTTNSTRGRSESRSSSRSRSRSRSRSRSESKTRQNKRKSMKNVGRK" gene complement(<308714..>310174) /gene="Cbn-bath-42" /locus_tag="CAEBREN_07052" /db_xref="WormBase:WBGene00145777" mRNA complement(join(<308714..309045,309107..309671, 309724..309992,310117..>310174)) /gene="Cbn-bath-42" /locus_tag="CAEBREN_07052" /product="CBN-BATH-42 protein" /db_xref="WormBase:WBGene00145777" CDS complement(join(308714..309045,309107..309671, 309724..309992,310117..310174)) /gene="Cbn-bath-42" /locus_tag="CAEBREN_07052" /note="contains similarity to Pfam domain PF00651; contains similarity to Interpro domains IPR002083 (MATH), IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ), IPR013089 (Kelch related)" /codon_start=1 /product="CBN-BATH-42 protein" /protein_id="EGT53203.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR002083" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR013069" /db_xref="InterPro:IPR013089" /db_xref="PFAM:PF00651" /db_xref="WormBase:CBN07052" /db_xref="WormBase:WBGene00145777" /translation="MSSRSSWPSVDLSRSMSSKADDLPPQPRRLEVVSKQATRVTALS TKLEWKIEQFEKLMKLVKNGSNLISRMFSVPDAPTVCWELHVYPNGKREEDMNHVSFF LRQVGLSRGEEPIMTEFQIYALDANNQRVSVCRDTKDFTNQQGRGKFQVTRDKMTGAL RSDGTLFLICEVEYFPPGSKISVEPVVEEDVSADEPEEMPEVIVRANNRSMWEDELFT DCTIHVGNKYIKAHRCILGQNSPVFRSMFSSPNMIEAQKGEIHIQDAKYDSVRAMVEF MYTGATESLESQGNIDEILAIADKYEVLMLKDQCERLIAQTISLKNVTQIAMFSDTYT ADYLKSAVIRFLMTHHRVVIKTQDWINLKKSRHELANELLEAVLTTDQEDDEGSSSVA TPPPPSRKRCRRSAK" gene <311151..>322903 /locus_tag="CAEBREN_31265" /db_xref="WormBase:WBGene00193230" mRNA join(<311151..311887,311986..312298,312466..312636, 312669..313474,313521..314937,315161..316162, 316210..316481,320726..322373,322442..322801, 322847..>322903) /locus_tag="CAEBREN_31265" /product="hypothetical protein" /db_xref="WormBase:CBN31265" /db_xref="WormBase:WBGene00193230" CDS join(311151..311887,311986..312298,312466..312636, 312669..313474,313521..314937,315161..316162, 316210..316481,320726..322373,322442..322801, 322847..322903) /locus_tag="CAEBREN_31265" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000555 (Mov34/MPN/PAD-1), IPR019581 (Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding), IPR012591 (Pre-mRNA-processing-splicing factor 8), IPR019580 (Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding), IPR021983 (PRP8 domain IV core), IPR012984 (PRO, C-terminal), IPR012592 (PROCN), IPR019582 (RNA recognition motif, spliceosomal PrP8)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53300.1" /db_xref="InterPro:IPR000555" /db_xref="InterPro:IPR012591" /db_xref="InterPro:IPR012592" /db_xref="InterPro:IPR012984" /db_xref="InterPro:IPR019580" /db_xref="InterPro:IPR019581" /db_xref="InterPro:IPR019582" /db_xref="InterPro:IPR021983" /db_xref="WormBase:CBN31265" /db_xref="WormBase:WBGene00193230" /translation="MADHGGPPQTEHHAIPDSILEEKSRKWKQLQGKRYSEKKKFGMA DTQKEEMPPEHVRKVIRDHGDMTSRKYRHDKRVYLGALKYMPHAVLKLLENMPMPWEQ IRDVKVLYHITGAITFVNDIPRVIEPVYMAQWGTMWIMMRREKRDRRHFKRMRFPPFD DEEPPLDYADNILDVEPLEPIQMELDPEEDSAVAEWFYDHKPLATTRFVNGPTYRKWA FSIPQMSTLYRLANQLLTDLVDDNYFYLKFRYANIPIINFSDEDWNEFNDINKVIIRA PIRTEYRIAFPFMYNNLISSLPVQVSWYHTPSVVFIKTEDPDLPAFYYDPLINPIVLS NLKAVRRKNMSKHFTFTEETLPEGEEEDEWTLPEDVRPIFEDVPLYSDNTANGLALLW APRPFNLRSGRTRRARALSRRFVPIFRCSLKVHFLGMPVKVRVSYQKLLKVFVLNALK HRPPKPQKRRYLFRSFKATKFFQTTTLDWVEAGLQVLRQGYNMLNLLIHRKNLNYLHL DYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDAHVQYRLNNVDAYQLAD GLQYIFAHVGQLTGMYRYKYKLMRQVRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGW RVWLFFLRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHD ILDMMPDGIKQNKARVILQHLSEAWRCWKANIPWKVPGLPTPVENMILRYVKAKADWW TNSAHYNRERVRRGATVDKTVCKKNLGRLTRLYLKSEQERQHNYLKDGPYISAEEAVA IYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKESYSVKNRLNQSQREELAL IEQAYDNPHEALSRIKRHMLTQRAFKEVGIEFMDLYTHLIPVYDIEPLEKVTDAYLDQ YLWYEADKRRLFPSWVKPGDTEPPPLLTYKWCQGLNNLQDVWETSEGECNVIMETKLE KIAEKMDLTLLNRLLRLIVDHNIADYMTSKNNVLINYKDMNHTNSFGIIRGLQFASFI VQFYGLVLDLLVLGLRRASEIAGPPQCPNEFLQFQDVATEIGHPIRLYCRYIDRVWIM FRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWD IKNRLPRSITTVEWENSFVSVYSKDNPNMLFDMSGFECRILPKCRTANEEFVHRDGVW NLQNEVTKERTAQCFLKVDEESLSKFHNRIRQILMSSGSTTFTKIVNKWNTALIGLMT YFREAVVNTQELLDLLVKCENKIQTRFKIGLNSKMPSRFPPVVFYTPKEIGGLGMLSM GHVLIPQSDLRWMQQTEAGGVTHFRSGMSHDEDQLIPNLYRYIQPWEAEFVDSVRVWA EYALKRQEANAQNRRLTLEDLDDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTEFKAY QILKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFRGTYFPTWEGLFW ERASGFEESMKFKKLTNAQRSGLNQFQIVVSLYGGRRLSIVPTSTLVSSTARSYWKSS CTEKYRHSKFRSFNSSRAHFVDVMDNTTTQKYWLDVQLRWGDYDSHDVERYARAKFLD YTTDNMSIYPSPTGVLIAIDLAYNLYSAYGNWFPGMKPLIRQAMAKIIKANPAFYVLR ERIRKGLQLYSSEPTEPYLTSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKP INGAIFIFNPRTGQLFLKIIHTSVWAGQKRLSQLAKWKTAEEVAALIRSLPVEEQPRQ IIVTRKAMLDPLEVHLLDFPNIVIKGSELMLPFQAIMKVEKFGDLILKATEPQMVLFN LYDDWLKTISSYTAFSRVVLIMRGMHINPDKTKVILKPDKTTITEPHHIWPTLTDEDW IKVELALKDMILADYGKKNNVNVASLTQSEVRDIILGMEISAPSQQRQQIADIEKQTK EQSQVTATTTRTVNKHGDEIITATTSNYETASFASRTEWRVRAISSTNLHLRTQHIYV NSDDVKDTGYTYILPKNILKKFITISDLRTQIAGFMYGVSPPDNPQVKEIRCIVLVPQ TGSHQQVNLPTQLPDHELLRDFEPLGWMHTQPNELPQLSPQDVTTHAKLLTDNISWDG EKTVMITCSFTPGSVSLTAYKLTPSGYEWGKANTDKGNNPKGYMPTHYEKVQMLLSDR FLGYFMVPSNGVWNYNFQGQRWSPAMKFDVCLSNPKEYYHEDHRPVHFHNFKAFDDPL GTGSADREDAFA" assembly_gap 316488..320692 /estimated_length=4205 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<325416..>325460) /locus_tag="CAEBREN_13088" /db_xref="WormBase:WBGene00151813" mRNA complement(<325416..>325460) /locus_tag="CAEBREN_13088" /product="hypothetical protein" /db_xref="WormBase:CBN13088" /db_xref="WormBase:WBGene00151813" CDS complement(325416..325460) /locus_tag="CAEBREN_13088" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53182.1" /db_xref="WormBase:CBN13088" /db_xref="WormBase:WBGene00151813" /translation="MLSSGKCVSQEILG" gene <330156..>330946 /locus_tag="CAEBREN_02194" /db_xref="WormBase:WBGene00140919" mRNA join(<330156..330308,330363..330560,330604..330669, 330794..>330946) /locus_tag="CAEBREN_02194" /product="hypothetical protein" /db_xref="WormBase:CBN02194" /db_xref="WormBase:WBGene00140919" CDS join(330156..330308,330363..330560,330604..330669, 330794..330946) /locus_tag="CAEBREN_02194" /note="contains similarity to Interpro domains IPR018247 (EF-Hand 1, calcium-binding site), IPR011992 (EF-hand-like domain), IPR002048 (Calcium-binding EF-hand), IPR020636 (Calcium/calmodulin-dependent protein kinase-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53266.1" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR018247" /db_xref="InterPro:IPR020636" /db_xref="WormBase:CBN02194" /db_xref="WormBase:WBGene00140919" /translation="MPVAKDNQFWDALMENKVAKKLIKKHKCKAKCENIDELAQRYEV SKQEVEKVFKIFQLMDDDGSGTISSSEVAKMLNELGIDVSPKVVQAVMRSSDVSGDGQ IDFEEFLAAVTSKIKLSNVKADVQLMLSKIDKNPEKVISAEELVVAWSETVSTNITVK EACALIQQADTQGRGKATIHEFITMCQTV" gene <331485..>339377 /locus_tag="CAEBREN_09601" /db_xref="WormBase:WBGene00148326" mRNA join(<331485..331529,331574..331936,331979..332821, 332869..333642,333689..334102,334153..334459, 334507..335398,335447..336580,336641..336935, 336976..337590,337634..338350,338780..338895, 338969..339095,339264..>339377) /locus_tag="CAEBREN_09601" /product="hypothetical protein" /db_xref="WormBase:CBN09601" /db_xref="WormBase:WBGene00148326" CDS join(331485..331529,331574..331936,331979..332821, 332869..333642,333689..334102,334153..334459, 334507..335398,335447..336580,336641..336935, 336976..337590,337634..338350,338780..338895, 338969..339095,339264..339377) /locus_tag="CAEBREN_09601" /note="contains similarity to Pfam domain PF00435; contains similarity to Interpro domains IPR002017 (Spectrin repeat), IPR011992 (EF-hand-like domain), IPR018159 (Spectrin/alpha-actinin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53230.1" /db_xref="InterPro:IPR002017" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR018159" /db_xref="PFAM:PF00435" /db_xref="WormBase:CBN09601" /db_xref="WormBase:WBGene00148326" /translation="MSTDFGNEEIAREIAGRRVHVLQKFADFEQKASEKRRLLVQSGQ LQRFLRYYHRIRGNITIKPCRSTGEFQQALELLIENAEDVHIRHSAEHLARSQKSLNR LRGEVEGRRNDLLKLDREAVQLIDEEHYASEEIQKAMVEVRSRWDYLLELLDLKWLQV QKELESIDFENKCDLILGWISKTKVVEKPDMKIFDEIRKYSVLWNDILATYQQIPDPS PKDTDNFEKVRASWHNFQDFVDSIHKELDENERLQKFIDNAEHLTQWMDEKENEIRNK YSNLNVEESMKYRKTIEIEIKSTKQRLEDLKAQMKTPDNNSSPKNSQELQNYTEQVEE RFATFQKFIEKWRFDLENAADLDALLREADDIRFWCSEKMEDMKVMKDSDSVDCDELA MWIESNNFDFKSWDSVVEQFTSSAQKLLIKLKDTEVNNELEKIKSMYGLAKNTSVDCN DTLEARIKTINVEKLVYQTHQKASHLVSVLQKSEEIFKNIKIEDAEKELLMMDGVAVR CVSVIEQIEHIQDELQQNQDKSTQLSDCASEQVRELGEMKEILNSSPTTRKEQLRQIV DAAYFIDNCREIRNHTEDILNSLKGGKTKRDSAQPIHEQLESLRNELASLNLDEEDRA AAENDLKIAESNLRKIEKEHEKLAETEESRKVADRTEKFAERVNHWIESSEKEQEETD FPIQSQYLHRILTNCEHLISSSEAYRSSIEKRRSELRDSPNSYQPKCILDGIQNALED FELRIRQKAADIENTLKASEQMTELHSQNDWIKAKIKEFGVQPIWDSLLVAQRMSRRY EKDSEEIENRRKIINVAMETMPKERHSIIDEIEHNWSRLKTMVDEREGVVNRMIKLYE YDEESSTTAEWLREKMMYADAIEPRDDESINRIMVKKLEALADEVDNYKSKIVETHAL LEDALVTPKTKDSTSQQVISLKSALTRKQGEIESDYKALGRLIDKKLNELHSLLQDIN ISREIAEMEQWIEVEETQLNRFLATDSDELPAKLEDVMENVQRRRAKLTDVKCEAVGG GQVYTHKIDDAFGMLDVFSFELDRIRQKSHRSSLLKKLRVEAEDVIDAIQITRESFDI YPSVSRKRGIVNELPNLDGDLETLRRRVIASLDKAKEVRAANADLAPQVYDLEERLEK EWTEISKAAENRKKRMERGKLLNELETELLDMEHWIDTFNEEVIVVTGGIHDSLGVQV GLESIDTWREELSHRVDQLSDAKNVLASVLSTITQQDEKNRWLGRVANIENDLVKARK TIDAKQDELSDFSHVLGAERDCDRLYTWVVNKREQLETESATSNVKTVIRKMNEVEKM MISRANEVEELRDFLEKLHTSDRPNSFKSNELQEKFERLDDEWRYLEDELQRRETDLN ESMSQLLLDEQFEKIQQWIEERTQFLGLETPTENKPADIEKRQKQYDKLSAEINDYLP IFEDFLNNEQADSEKVHIVRELWSSLIETTTIRQKSLAQEVQRNRLFDLLEDIGLWLS DSEAEVHSTVKLSNLYNTVDAEKASRRLKSLNEQAGEKDDLLRRVRKDTETDQTVEKL RSGISELKKLIKANYEDLEIWKSMQEVIKAIDDEICWYKEISVIVSSTDVGHDTPSLD VIRRKHQRLLVEAERRKQKVAKIVDRTTELMSGRNRPSLDAKTDEIDEKLAQLTELLE SNNQIGEIRTNRLEKWADYFMLLDEIREKEHALDQMIELKKGTQEAVLADVERKCEVL ETLGEQLDSLKNTAEQMSNDEFIRSKAAENALDKLRNKWLSVTRTMEDAHRKLNEAME SSKFSWKCDTAIQCIRDQEEKISNLVRQQKRTTSFEHAAYHSTMSFVESYSKETIERL VKTSTQLRDPTEANKKLAAISERLNSLKKQLGLLAEKIENDKDLKQRIQKIQDDYSKR ACELGNWLEQAEEEVADVVWFQSKESSEDCQHTLVEILEALRNDKSEQLGELELLEVE LAELNEDVNTFTWYSFKALANRMDRLDQTCCDRIKIVEEEIRRHTENENICEEAANTL KMCRNVILEVKKEFDHLHSLKLDDQRDKLMALIEKVQGSGMVGELEQWRSLMGSRFIF NNKFTTVTPHGVLVDTYQVLELMSSMLRSVEQSIAERNSSGVTEKQLREFELAFEYFD REKKGWLDYEHFELCIKSQGYDFTIESSTTETIELLDPTRSGRVLKSDYMRWMVKNET TNILDDHSAIEDALRSLDARKLSDSMSRKEAEFFMRKIAKHTETFTEHIHLEYKDFVD SFY" gene <339619..>342797 /locus_tag="CAEBREN_23135" /db_xref="WormBase:WBGene00161860" mRNA join(<339619..339672,340578..340936,341075..341420, 341798..341956,342642..>342797) /locus_tag="CAEBREN_23135" /product="hypothetical protein" /db_xref="WormBase:CBN23135" /db_xref="WormBase:WBGene00161860" CDS join(339619..339672,340578..340936,341075..341420, 341798..341956,342642..342797) /locus_tag="CAEBREN_23135" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53198.1" /db_xref="WormBase:CBN23135" /db_xref="WormBase:WBGene00161860" /translation="MFTIKKRTSCIEPPSPRSILRKGKPEISTPRKVGFFDDVGKPLV EYRAIPPREIDGQYSKNHHLRTTDCSETLNHMHPHEKAAGQLILHKSANQINRMPWTV YRVKNAPTPKECCSEVKMQEEARLEKEGACKFPLIGTFDAFDPPGLKKDAEDRAMLST PVDIPLGVPVYTAPEPVVPVYTAPEPVFHPQPIFKPVELPQNTYQQVFETPPEQIAAQ NAAEIHVVSAAVNNLMAQLKERGLVPVDKPEPPPMDPPPYQEPPPPRQRPSRWTQASF KVAKTCVYFINRPNGCTRGDTCRYQHDEAERERRQLELQQSQAMREESWRRPNLRQHP YQQRGMPYNHPQDRRRVQRSRSP" gene complement(<343197..>349084) /gene="Cbn-unc-36" /locus_tag="CAEBREN_02123" /db_xref="WormBase:WBGene00140848" mRNA complement(join(<343197..343283,343480..343711, 343778..343940,344034..344148,344199..344895, 344945..345148,345244..345749,345844..346029, 346097..346318,346366..346485,346652..346783, 347308..347475,347526..347620,347811..348062, 348164..348325,348374..348473,348699..348888, 349014..>349084)) /gene="Cbn-unc-36" /locus_tag="CAEBREN_02123" /product="CBN-UNC-36 protein" /db_xref="WormBase:WBGene00140848" CDS complement(join(343197..343283,343480..343711, 343778..343940,344034..344148,344199..344895, 344945..345148,345244..345749,345844..346029, 346097..346318,346366..346485,346652..346783, 347308..347475,347526..347620,347811..348062, 348164..348325,348374..348473,348699..348888, 349014..349084)) /gene="Cbn-unc-36" /locus_tag="CAEBREN_02123" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR013608 (VWA N-terminal), IPR002035 (von Willebrand factor, type A)" /codon_start=1 /product="CBN-UNC-36 protein" /protein_id="EGT53323.1" /db_xref="InterPro:IPR002035" /db_xref="InterPro:IPR013608" /db_xref="WormBase:CBN02123" /db_xref="WormBase:WBGene00140848" /translation="MRAVHLLVVLTIYITNTQSFNKESIKECAQVLSEHMKETFSKIS HETILKQNYEKLVEEEQFDPRAELKRSKHRIEDYLKVRSQFAYKAKISLESRSVKNDT HVNDPQSKSFIRFMSAKQGNDGTTIYESNHLGRKLKVNETKSFNLTQNANFYTLPTSS VSSAVHIPTPLYDRNEDLLRKIDWSDIDAVYRTNREETKDLAFQLFCSEAGYMRYYPA ASWFWDNQDEHLDLFDCRNTEWYINSATNSKNVLIMLDMSGSMLGQRYEVAKQTTEAI LETLSHNDYFNIMTFSKNTFLLDGCNGTNGLLQATMRNKKALRRKMDTYQSEGKAEYE KALPLAFSVLLDLKGSYSLYTKEEMSTMAANSTNDYQFHLELPEHVLAATKQYIDSIN NGGGDNNRGACENVIMLITDGAPNAYKKIFDMYNADKKVRVFTFLVGDEAIDFNEVRE MACNNRGYMVHVANMADVDEKIHHYIRRMSRVVGRHYKESGQLSWWTGVYRERLYLPR PEVFAEPVPITNQSFAVMNKMASRRKIRLQKSEARSRMFVTTVSYPVIVNETFMGVAA IGAKSYFFMLDQNGFVMTHPQLRPIDPVTKYHKQNYNNMDLLELEVGQNQNVRSSQKT QAVSDLVCESGANYAECVDDLRKAVRKMIIDCDNSDVQQLDVLYATELLDRVYPQTNT YYAECINHANFVLGLAVAKGDDYRIIKKQKKYDFGRVKMDWMGDKRWRLHPHWRYCFL NDTDTHMSKEEAFEIYAQQMSDSGKAPLLCEYRRNLVEKLLLDMEATSNLIDSWDTQY SYMKNNLIHLAFFSTPSGMIRYYNLTLQDYDYTDPYWSIFEHIGHLLSFEHAQESYNH FITDLNRKSTDDRYYRRAVRMKDTIMFDVSNNSKIWYKSETQLTGYGLNENLTMLGQA FKAIYLDKAVLGVSGYEFAYDHVVDTMAEHGCPAADDRKWCVLLDEHAYVFFSNQNDI SYEDYLVGKGKHISQWFGGLNRIAQRAMALLVENKFYTKFTYTDNQAVCKAAKQVTTS ASRFRPFYPLFQFLMQTFNFVVRLASQVSGGYLIWLPKIQFTEAYTASFHEGTDVYPC PKQSSFYFSNKDGKNRPSSTHLVNGNRSERPCKMNAKCSVKMEASFVEGTNLVMVWIT QDKASENCYDESECSMDIPSSQVPFGFEEVKNEDSCENLEKRKSKANDVCYSIDDDDS ENERRPCSMSPSTVSMFSILVGFLHFYMF" gene <349294..>350590 /locus_tag="CAEBREN_28923" /db_xref="WormBase:WBGene00190888" mRNA join(<349294..349673,349784..349895,350211..350364, 350556..>350590) /locus_tag="CAEBREN_28923" /product="hypothetical protein" /db_xref="WormBase:CBN28923" /db_xref="WormBase:WBGene00190888" CDS join(349294..349673,349784..349895,350211..350364, 350556..350590) /locus_tag="CAEBREN_28923" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53314.1" /db_xref="WormBase:CBN28923" /db_xref="WormBase:WBGene00190888" /translation="MGETFFAKRRRKNIEGPWTEKQNQMVMETRRIFGEWGETKKGEK SEYTHGGHGLLKQKSPEERNVKNRERLQWGIRYEKKKRKAFSLTSPHSEHYLFGSGAK SMGRRKEKKTKRGEAVLCCGCGAKKKLGDGESTNRCTFEKCEKVNEVSEQNKIIGVVK LKEKTCQENIAAIIQFSQISLESSVNNFVFKILLAIKSKALNTYCTHDIRCSYIRVET QISTGSPN" gene <351371..>351813 /gene="Cbn-snb-7" /locus_tag="CAEBREN_11649" /db_xref="WormBase:WBGene00150374" mRNA join(<351371..351448,351496..351574,351621..351667, 351712..>351813) /gene="Cbn-snb-7" /locus_tag="CAEBREN_11649" /product="CBN-SNB-7 protein" /db_xref="WormBase:WBGene00150374" CDS join(351371..351448,351496..351574,351621..351667, 351712..351813) /gene="Cbn-snb-7" /locus_tag="CAEBREN_11649" /note="contains similarity to Interpro domain IPR001388 (Synaptobrevin)" /codon_start=1 /product="CBN-SNB-7 protein" /protein_id="EGT53186.1" /db_xref="InterPro:IPR001388" /db_xref="WormBase:CBN11649" /db_xref="WormBase:WBGene00150374" /translation="MDSPPPVSRIGWDDQKIMRTRRELNTVKSIMKENVQKIMERQGK LDDLVERAQKLEEASDVYVKCAVKIRREMSWKHKALRYTIITVSSVSALAGIAYSLL" gene complement(<351959..>357627) /locus_tag="CAEBREN_30545" /db_xref="WormBase:WBGene00192510" mRNA complement(join(<351959..351975,352149..352551, 352601..352815,352863..353459,353503..353698, 353864..353986,354875..354979,355029..355116, 355165..355272,355317..355432,355529..355771, 355822..355893,355939..356086,356183..356678, 357561..>357627)) /locus_tag="CAEBREN_30545" /product="hypothetical protein" /db_xref="WormBase:CBN30545" /db_xref="WormBase:WBGene00192510" CDS complement(join(351959..351975,352149..352551, 352601..352815,352863..353459,353503..353698, 353864..353986,354875..354979,355029..355116, 355165..355272,355317..355432,355529..355771, 355822..355893,355939..356086,356183..356678, 357561..357627)) /locus_tag="CAEBREN_30545" /note="contains similarity to Pfam domain PF00003; contains similarity to Interpro domain IPR017978 (GPCR, family 3, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53293.1" /db_xref="InterPro:IPR017978" /db_xref="PFAM:PF00003" /db_xref="WormBase:CBN30545" /db_xref="WormBase:WBGene00192510" /translation="MDKEENSCVKRNNKQMEKLKLGVECLDFRSNNYRQIINNALPTI DPQMLSQAQAAINPYTDIFVNPPKNLVDFPMANLASQSGLAASTGAFWQPQQQSQQLS TVSQVPWNPTFSSQSSPASTISFQSYHNPSTFPSTTTTTTTSTTTTSPTYPTPKATTK KSTETLWTTSKSPMKLSKNPKPSKVNQKSSKSSATSFDSAQLSVLSHRLLNDVLIIPS SRRLYILAILPIHQSTGQQNFECGEIDLNAIIRMAAFLEALKTINESNLLKEIGADIG AIIVDSCSTDLRSVADLYELLSGTNIQRSDLIAIIRDDSTYMPNTEQIMRQLNLPVIN TFFTTYQAVHTSGTLPSMSLPIQSIISALRHYQSTCVNIIFDEKYTESVAEFQKVALS EGMCVEVAIHVKNASSTVSEMVVRRLLLSEARIVVALLSEDTWIQMTKALRSEMVIAG RFVFISMQDSRWTTSRKFIESWPTFEQHLISVTPKTPINHQEEIKKLTENIPKLSLPN LWLKQFWSSAFKCHVRLYLKTYNSKIFSAHSIGLAFRSFVDRVCPGALVISLSDCVND PFSGFHQSIIDLDFVHHLSDISVSFNYSTGFRDIPLRINRVQFVEDRLNFSEIGIFDP IQNQFKDSSDTATPSARGSFLLMSSTCPKSTCAKELAKSTIKQQLPSIVKALTDLEIM IFTIFSVLSALTCLMCMYLKVISVSEYRNLTAITFLGLAFLSLSAPSFIIPPNGISCS LRKLLFPIAISITIAPVFVKTVLIWKSIGSSSSSVLIAFCIVIIQTVISTEWLLLSSD SATEFVSTLHGTMWRCSPGDSAEEMLMLSCCLIALLSLLSFIFSIASLKHSQSLQHLM ISILAIFFETGLYVSLPLIPYKTRDSVMATGKFPFSKNFPFSKKKQFSAILIFAFISL LLSHTGRSSAKEESECGGTLQKTNENWLQHVVQSPKDQMALVQNYHTASTHPQSTMQY EKRSEGTLRRNTSLYGTEAYELPTS" gene complement(<359038..>361911) /gene="Cbn-unc-86" /locus_tag="CAEBREN_19903" /db_xref="WormBase:WBGene00158628" mRNA complement(join(<359038..359179,359229..359339, 359393..359667,359745..360102,360151..360287, 361852..>361911)) /gene="Cbn-unc-86" /locus_tag="CAEBREN_19903" /product="CBN-UNC-86 protein" /db_xref="WormBase:WBGene00158628" CDS complement(join(359038..359179,359229..359339, 359393..359667,359745..360102,360151..360287, 361852..361911)) /gene="Cbn-unc-86" /locus_tag="CAEBREN_19903" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR012287 (Homeodomain-related), IPR013847 (POU), IPR000327 (POU-specific), IPR017970 (Homeobox, conserved site), IPR001356 (Homeobox)" /codon_start=1 /product="CBN-UNC-86 protein" /protein_id="EGT53204.1" /db_xref="InterPro:IPR000327" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR012287" /db_xref="InterPro:IPR013847" /db_xref="InterPro:IPR017970" /db_xref="WormBase:CBN19903" /db_xref="WormBase:WBGene00158628" /translation="MQNTAPVPTTTAVTASKMQPFNNSLFGSFDDPLLNARAAQVALA DIDVKNVPQLTNPLMRPHDMFSYSNYFSGIHDTSAATNIYQGLPSSSEPFDASVVVPT SSEDQMTPLQQVMAMQTYGAPPPFQYNMSHMTQHFTTSSISSSSNIARYPIAPPTSEL ETDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSH NNMVALKPILHSWLEKAEEAMKQKDTIGDINGILPNTDKKRKRTSIAAPEKRELEQFF KQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKRDFRSQFRARSAAAVMGPRVL PVVVGNGSSSLKQEQGSYNALPGFFD" gene <368057..>368914 /locus_tag="CAEBREN_10935" /db_xref="WormBase:WBGene00149660" mRNA join(<368057..368116,368162..368288,368343..368422, 368469..368555,368603..>368914) /locus_tag="CAEBREN_10935" /product="hypothetical protein" /db_xref="WormBase:CBN10935" /db_xref="WormBase:WBGene00149660" CDS join(368057..368116,368162..368288,368343..368422, 368469..368555,368603..368914) /locus_tag="CAEBREN_10935" /note="contains similarity to Pfam domain PF03637; contains similarity to Interpro domain IPR005301 (Mob1/phocein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53231.1" /db_xref="InterPro:IPR005301" /db_xref="PFAM:PF03637" /db_xref="WormBase:CBN10935" /db_xref="WormBase:WBGene00149660" /translation="MTVSADNRVVRRNGPGTKRADWNCWPPLAFEEMDSALNIQQYIQ QTIKANPADVDTILTPPLDQDEGVWKYEHLRQFCIELNGLALLLQRECVPETCQQMTA TEQWIFLCAAHKNPNECPAIDYTRHTLDGAATLLNSNKYFPSRVNIKEISISKLGSVA RRVYRIFSHAFFHHRKLFDEFENETHLCKRFTTYVSKYNLMQQEHLIVPILPNQQQQP AAQ" gene <369725..>370292 /gene="Cbn-rfs-1" /locus_tag="CAEBREN_14334" /db_xref="WormBase:WBGene00153059" mRNA join(<369725..369997,370048..370167,370215..>370292) /gene="Cbn-rfs-1" /locus_tag="CAEBREN_14334" /product="CBN-RFS-1 protein" /db_xref="WormBase:WBGene00153059" CDS join(369725..369997,370048..370167,370215..370292) /gene="Cbn-rfs-1" /locus_tag="CAEBREN_14334" /codon_start=1 /product="CBN-RFS-1 protein" /protein_id="EGT53273.1" /db_xref="WormBase:CBN14334" /db_xref="WormBase:WBGene00153059" /translation="MHSGDQKSCGSVEDLDRIFCKQVEKTNELRDSLNSFLEMVNIQL VVVENIDALLHDTAYDRDIGRSVQSDIADRFRRLTRAGITVVVTNHITYWRGYPAPAL GAFWASQIKNRFYVEKQSDDSDVRSVSTMNEVGEGTRRVQFRIGDNGLEPVRNS" gene <372404..>374006 /locus_tag="CAEBREN_03873" /db_xref="WormBase:WBGene00142598" mRNA join(<372404..372517,372560..372642,372685..373074, 373118..373319,373365..373865,373914..>374006) /locus_tag="CAEBREN_03873" /product="hypothetical protein" /db_xref="WormBase:CBN03873" /db_xref="WormBase:WBGene00142598" CDS join(372404..372517,372560..372642,372685..373074, 373118..373319,373365..373865,373914..374006) /locus_tag="CAEBREN_03873" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001810 (F-box domain, cyclin-like), IPR006553 (Leucine-rich repeat, cysteine-containing subtype), IPR001611 (Leucine-rich repeat)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53215.1" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR006553" /db_xref="WormBase:CBN03873" /db_xref="WormBase:WBGene00142598" /translation="METADRRSAAAAANSRRAKRLAQQAHKTHPVIQAKQNQMYLITT LSQVQTDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSWNVLALDGSNWQRVDLF TFQRDVKTAVVENLARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKR VTDASCENLGRYCHKLQYLNLENCSSITDRAMRYIGDGCPNLTYLNISWCDAVQDRGV QIIITNCLSLDTLILRGCEGLTENVFGPVEEQMGALKKLNLLQCFQLTDITVQNIANG AKILEYLCMSNCNQLTDRSLVSLGQNSHNLKVLELSGCNLLGDNGFLQLARGCKQLER LDIEDCSLVSDNTINALANQCSALRELSLSHCELITDESIQNLATKHRESLHVLELDN CPQLTDSTLSHLRHCKALKRIDLYDCQNVSKDAIVRFQHHRPNIEIHAYFAPVTPPAD QVVNRGGMLF" gene <374771..>376450 /locus_tag="CAEBREN_20707" /db_xref="WormBase:WBGene00159432" mRNA join(<374771..374812,374862..375319,375396..375530, 375578..375932,375987..376100,376165..376265, 376315..>376450) /locus_tag="CAEBREN_20707" /product="hypothetical protein" /db_xref="WormBase:CBN20707" /db_xref="WormBase:WBGene00159432" CDS join(374771..374812,374862..375319,375396..375530, 375578..375932,375987..376100,376165..376265, 376315..376450) /locus_tag="CAEBREN_20707" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53165.1" /db_xref="WormBase:CBN20707" /db_xref="WormBase:WBGene00159432" /translation="MGTVDDGWGAPYDELTYIDAYEQLEMALLEPLDRVLDKANVEEF RPKFKNQQNPKNKYKKKMSADEEWKNVVYGFGTTEESELSDHESRKHYFQPPLQMQRN SFVKNVLMSFKRSSGMDITRLAVMGCGEMSLEKGICEYLGSFGTINVLSVDIDPVTLS VGQQLLEKYLNFHGDVLAAETGLPVLMRSYLGNILEPDHRFADVDAIVSLEVVEHIPL EDAKKFVNNVLGVLMPRIFIFSTPNHEYNAVFGMKPGEFRHDDHKFEMNRKEFSDWLE ELSVRFPHYQIDKPHYIGMTNGYEDLSGASQAAVCRLQSDLNTTLPQNVTPYETVGHV ACRLGSRLVAYNLVRDAFLEWLEKTEFRESELRKDGYTPYWSFNVAHILHHLHAPVSF TSTIDEKVASKYIQGMSSQKVFLDCSHGINGIGISLYQPKEDLIATVRKNAMKH" gene complement(<376646..>377422) /locus_tag="CAEBREN_28395" /db_xref="WormBase:WBGene00190360" mRNA complement(join(<376646..376730,376778..377010, 377417..>377422)) /locus_tag="CAEBREN_28395" /product="hypothetical protein" /db_xref="WormBase:CBN28395" /db_xref="WormBase:WBGene00190360" CDS complement(join(376646..376730,376778..377010, 377417..377422)) /locus_tag="CAEBREN_28395" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53290.1" /db_xref="WormBase:CBN28395" /db_xref="WormBase:WBGene00190360" /translation="MKLISATVILSSFLLSSCTLEHALEDDISDTFIPKIRGNGDVII LDLSNIDHANGAEIPRNLTEEDTKIIPTNIDFAALKEAYAKENKAERFLPSRLFFDDE DKKKK" gene <378392..>378982 /locus_tag="CAEBREN_13267" /db_xref="WormBase:WBGene00151992" mRNA join(<378392..378499,378551..>378982) /locus_tag="CAEBREN_13267" /product="hypothetical protein" /db_xref="WormBase:CBN13267" /db_xref="WormBase:WBGene00151992" CDS join(378392..378499,378551..378982) /locus_tag="CAEBREN_13267" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53202.1" /db_xref="WormBase:CBN13267" /db_xref="WormBase:WBGene00151992" /translation="MSSKPMSSAIEQIPPYEYFKYVFATRCTVLGCSSLELLMVILGS LGDSNILAKLFYLIFIGGSVAVSAFNIHQATDGRDEIRKVVGAGDNETRGRAAALVAV PALSGVFVFLCVSGHAFFSLFVLIHVLASVGQLGLEAYEAKNGFKVRAPENKKAVADP YDENYQTLNNVQDEIFDKK" gene complement(<379178..>379971) /locus_tag="CAEBREN_30085" /db_xref="WormBase:WBGene00192050" mRNA complement(join(<379178..379369,379416..379679, 379724..379858,379909..>379971)) /locus_tag="CAEBREN_30085" /product="hypothetical protein" /db_xref="WormBase:CBN30085" /db_xref="WormBase:WBGene00192050" CDS complement(join(379178..379369,379416..379679, 379724..379858,379909..379971)) /locus_tag="CAEBREN_30085" /note="contains similarity to Pfam domain PF00335; contains similarity to Interpro domain IPR018499 (Tetraspanin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53282.1" /db_xref="InterPro:IPR018499" /db_xref="PFAM:PF00335" /db_xref="WormBase:CBN30085" /db_xref="WormBase:WBGene00192050" /translation="MSSKVAFISRILLFCLGLVMLLCSIGLVVWGSFMANEPYDRQLK DVVFNYNSPEPLADDKSNIRAWVWSVYWSMYGLSIGGVLISIIGLIAAISRKKTVVAT FLVLMVPFFLLQFGGAITIWTKRGNIRRLLYSFANDIYLTNSAFDISVIESTYQCCGV QGGQGTCPSLPPCDIALFNSVDNSMMIAGLIFFIPVLVLELLIINFAALILKFEPRY" gene complement(<380244..>381374) /locus_tag="CAEBREN_30709" /db_xref="WormBase:WBGene00192674" mRNA complement(join(<380244..380432,380483..380548, 380594..380860,380910..381047,381315..>381374)) /locus_tag="CAEBREN_30709" /product="hypothetical protein" /db_xref="WormBase:CBN30709" /db_xref="WormBase:WBGene00192674" CDS complement(join(380244..380432,380483..380548, 380594..380860,380910..381047,381315..381374)) /locus_tag="CAEBREN_30709" /note="contains similarity to Pfam domain PF00335; contains similarity to Interpro domains IPR018499 (Tetraspanin), IPR000301 (Tetraspanin, subgroup)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53317.1" /db_xref="InterPro:IPR000301" /db_xref="InterPro:IPR018499" /db_xref="PFAM:PF00335" /db_xref="WormBase:CBN30709" /db_xref="WormBase:WBGene00192674" /translation="MATWTIISRSALFFLNLAMMLSALALIGVGFWMRYDNSFDTDLK NIVYKTTDVKKLADAKFNIRVWLIVVFWSIIGLSFGAVATAVFGMVSSIFVKRRGLMI TYLVLIIILVVLEIGSGIAMLIRRNSLHGNTNDLIDAMYTTNAVSDINIIQNIYSCCG VEGGVFNGMYCNPMNPMPFCDVAVFNSVDNTMMISGIILLVILILQFIAIIVPVPLLI SKQQSFKDMYSTEPEPTDTRF" assembly_gap 382928..382937 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<385337..>385624) /locus_tag="CAEBREN_18119" /db_xref="WormBase:WBGene00156844" mRNA complement(<385337..>385624) /locus_tag="CAEBREN_18119" /product="hypothetical protein" /db_xref="WormBase:CBN18119" /db_xref="WormBase:WBGene00156844" CDS complement(385337..385624) /locus_tag="CAEBREN_18119" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53283.1" /db_xref="WormBase:CBN18119" /db_xref="WormBase:WBGene00156844" /translation="MSLIIASVIGVIILGLLIASGIMYLTKKKEKSNRSNISRARSQH EPPRTHTPTRGKKEKTKTKSSPSQVSSAPMSNISESSIRTEKSSMLSPNIV" gene <386248..>386983 /locus_tag="CAEBREN_04123" /db_xref="WormBase:WBGene00142848" mRNA join(<386248..386478,386618..>386983) /locus_tag="CAEBREN_04123" /product="hypothetical protein" /db_xref="WormBase:CBN04123" /db_xref="WormBase:WBGene00142848" CDS join(386248..386478,386618..386983) /locus_tag="CAEBREN_04123" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53278.1" /db_xref="WormBase:CBN04123" /db_xref="WormBase:WBGene00142848" /translation="MLDFGLCREFVKRDEGKLRTQRASAPFRGTTRYAPLNSMLEADT GRKDDIESWLYMVVEWTSGGLPWRKLKAGDRDKYTDSLDFYSTPDYKFVYYCIQHAAA ANKIKDSDPLDWDQNSPYIGPIEPPGDGKVIELDVEGVMSNEGSLNKTRKERETKRRA KKEEDKESEKNHTKKMDVRKEDEKKKGKKDAASKKSNN" assembly_gap 387477..390190 /estimated_length=2714 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <390245..>392181 /locus_tag="CAEBREN_15029" /db_xref="WormBase:WBGene00153754" mRNA join(<390245..390289,390330..390601,390647..390967, 391095..391146,391189..391264,391310..391468, 391510..391648,391728..391847,391896..392030, 392079..>392181) /locus_tag="CAEBREN_15029" /product="hypothetical protein" /db_xref="WormBase:CBN15029" /db_xref="WormBase:WBGene00153754" CDS join(390245..390289,390330..390601,390647..390967, 391095..391146,391189..391264,391310..391468, 391510..391648,391728..391847,391896..392030, 392079..392181) /locus_tag="CAEBREN_15029" /note="contains similarity to Pfam domain PF03385; contains similarity to Interpro domain IPR005049 (Protein of unknown function DUF288)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53176.1" /db_xref="InterPro:IPR005049" /db_xref="PFAM:PF03385" /db_xref="WormBase:CBN15029" /db_xref="WormBase:WBGene00153754" /translation="MNQMWPRGFPLEHIEKHTNENSSQVLCYKMKRAAVQQGLVHHDP DVDAIYRLLHADSNSGLDVKFNKFTPLITLSVGTYSPWNSQNTLFHKSAFHTLFLPTT VSFRTTDIWRSFISQKILHLSGLTVSFVPTNAVQFRNAHDYLKDFKDENQVYEDSGKM IEFLHKWKCSNESSNSLEECINQLSDDMVINGLWGVEDSELMKMFLSDLKSMGRINLE FELVDPKEDEEQGLRKAIQKLNYFGDIIEWCNETGYSNLTESFRSPEQLKKKHDESYV LQKNLNSVKVFSYGVVELFLTRTIIKPLNPTNSFPAAERIVETVRNSRDEKLFKAWEK YENGLKKYGYINETETAESGFYYIPTSESDYYATLMSLFYKSKFFLELAVNAFLKSVN HQTSLLEKKSYLWGEKRPKWASFYNKDLVGMHTVKISQFRIPGTQRTDYCRTIIQTWS DIMFGGSQNFTIKNDTDADYRNG" gene <392526..>393136 /locus_tag="CAEBREN_14666" /db_xref="WormBase:WBGene00153391" mRNA join(<392526..392552,392601..392691,392748..>393136) /locus_tag="CAEBREN_14666" /product="hypothetical protein" /db_xref="WormBase:CBN14666" /db_xref="WormBase:WBGene00153391" CDS join(392526..392552,392601..392691,392748..393136) /locus_tag="CAEBREN_14666" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53249.1" /db_xref="WormBase:CBN14666" /db_xref="WormBase:WBGene00153391" /translation="MRKQNRPNQTANRRELLDEALAVSPTTANEPAPPESPILESASS VVDSTPVPTLPVENPVSYVTPPPLQRVPYDAPPCRLANIRAVTESMNTAAIPSQPHHA HPSEPMSVDDNEFDDIHQTWAIIRRIVESRDKKIEKLLDELKKKDDLIRKLTDENADL RGKYQHHS" gene complement(<393203..>394566) /locus_tag="CAEBREN_11175" /db_xref="WormBase:WBGene00149900" mRNA complement(join(<393203..393616,393663..394019, 394070..394366,394483..>394566)) /locus_tag="CAEBREN_11175" /product="hypothetical protein" /db_xref="WormBase:CBN11175" /db_xref="WormBase:WBGene00149900" CDS complement(join(393203..393616,393663..394019, 394070..394366,394483..394566)) /locus_tag="CAEBREN_11175" /note="contains similarity to Interpro domain IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53253.1" /db_xref="InterPro:IPR007087" /db_xref="WormBase:CBN11175" /db_xref="WormBase:WBGene00149900" /translation="MSTYIQVNIYNQTLDVLKSRGLNLKDILKTIGCPDTWITEVPIP PSNRNRLDSPSVNSKKPSLTSASLASSVPTEDRSSLKKPFKSISAEIGFCHPLDLISS VERNPSPSIPVSQTSQTSSNGKLPTVLGGLFDDWDPTANLDVPETTSSIPADPILASD GLKTPKEEIIDEEDERTIQGSESFEMNDTEMANQQEINMINELFRQQNNFGTEPLNSE ESGQTANKGRKRNEEPEALNYVIECNYPGCGLRYNWRVKYGKLRLLDHALTHSNRKIP CKLCGFECTNVRKMRSHYGKAHPNERVEGYGMKALVSGDCGKKDGTDTEHDQQVSEDE LKELWNACYSESLHLVGHASGFVEGEKYRRMTKRRKMERDAINSVNSLF" gene complement(<394890..>395755) /gene="Cbn-pbs-6" /locus_tag="CAEBREN_02873" /db_xref="WormBase:WBGene00141598" mRNA complement(join(<394890..395006,395049..395442, 395490..>395755)) /gene="Cbn-pbs-6" /locus_tag="CAEBREN_02873" /product="CBN-PBS-6 protein" /db_xref="WormBase:WBGene00141598" CDS complement(join(394890..395006,395049..395442, 395490..395755)) /gene="Cbn-pbs-6" /locus_tag="CAEBREN_02873" /note="contains similarity to Pfam domain PF00227; contains similarity to Interpro domains IPR001353 (Proteasome, subunit alpha/beta), IPR016050 (Proteasome, beta-type subunit, conserved site)" /codon_start=1 /product="CBN-PBS-6 protein" /protein_id="EGT53169.1" /db_xref="InterPro:IPR001353" /db_xref="InterPro:IPR016050" /db_xref="PFAM:PF00227" /db_xref="WormBase:CBN02873" /db_xref="WormBase:WBGene00141598" /translation="MTSFTGITAVANATDNMAMFKQAMRDVATHPEWMSSRQIERQRW NPYSMEGGSTCAIAGENFAIVASDTRMTQNDINILTRDAEKIHVLNDSIVLTTSGFYG DVIQLKKVLQSRLHKYRFDYRADMSVDLCAELLARNLYYRRFFPYYTGAILAGIDENG KGAVFSYDPIGCIERIAYSASGAAEPMIIPFLDCQIGHVTLSEGYERPELTLERAISL MKDSFRGAAEREISTGDKIHLVIAEAGKPVVQKFLPLRED" gene <396037..>397211 /gene="Cbn-cids-1" /locus_tag="CAEBREN_17777" /db_xref="WormBase:WBGene00156502" mRNA join(<396037..396174,396227..396360,396412..396586, 396634..396878,396932..397079,397131..>397211) /gene="Cbn-cids-1" /locus_tag="CAEBREN_17777" /product="CBN-CIDS-1 protein" /db_xref="WormBase:WBGene00156502" CDS join(396037..396174,396227..396360,396412..396586, 396634..396878,396932..397079,397131..397211) /gene="Cbn-cids-1" /locus_tag="CAEBREN_17777" /note="contains similarity to Pfam domain PF04818; contains similarity to Interpro domains IPR006569 (RNA polymerase II, large subunit, CTD), IPR006903 (Protein of unknown function DUF618)" /codon_start=1 /product="CBN-CIDS-1 protein" /protein_id="EGT53251.1" /db_xref="InterPro:IPR006569" /db_xref="InterPro:IPR006903" /db_xref="PFAM:PF04818" /db_xref="WormBase:CBN17777" /db_xref="WormBase:WBGene00156502" /translation="MSDFTEHTLRQKLVGLSNNSNSIQSTSAWLLKNHNNREIIIRVW LRTVKKEVKGQRIVNLLYVANDVAQNARKSCPQFKDDFLPAIESAFRHSLETASKEVE SAVGKLINIWKERQIYTPSQCKRLQEVHNQMKLSGSFPSPASKDNGNNAQPGQFIVEE AKKNAQDVLISLKRLQNPPSTEREIRVQLSKYPDNISCPEKLQSVQNSQEAKKLLAQN EEALPMLEDYVRRLKEETKERETMENNLNTLIQNVRMSIEHHEKLCREVKRKEDRIKA DLLEVEKTFESLPDLTADLPNTPLPSLEPF" gene <397537..>398751 /locus_tag="CAEBREN_23681" /db_xref="WormBase:WBGene00162406" mRNA join(<397537..398207,398259..398497,398561..>398751) /locus_tag="CAEBREN_23681" /product="hypothetical protein" /db_xref="WormBase:CBN23681" /db_xref="WormBase:WBGene00162406" CDS join(397537..398207,398259..398497,398561..398751) /locus_tag="CAEBREN_23681" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR005225 (Small GTP-binding protein), IPR002917 (GTP-binding protein, HSR1-related), IPR011619 (Ferrous iron transport protein B, N-terminal), IPR006073 (GTP1/OBG), IPR004095 (TGS), IPR006074 (GTP1/OBG, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53248.1" /db_xref="InterPro:IPR002917" /db_xref="InterPro:IPR004095" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR006073" /db_xref="InterPro:IPR006074" /db_xref="InterPro:IPR011619" /db_xref="WormBase:CBN23681" /db_xref="WormBase:WBGene00162406" /translation="MGILEKIAEIEHEISRTQKNKATEYHLGLLKAKLAKYRQQLLEP TGKGGAKGEGFDVMKSGDARVAMVGFPSVGKSTLLSSMTSTHSEAAGYEFTTLTCIPG VISYNGANIQLLDLPGIIEGASQGKGRGRQVISVAKTADLILMMLDAGKSDQQKMLLE RELEAVGIRLNKKPPNIYVKQKKVGGVKFTNTVPLTHCNEKLIMTVLHEYKIFNADVI FREDCTVDEFIDVIQGNRVYMTCLYVYNKVDQISIEEVDRLARMPHHVVISCEMNLNM DYLLEKIWEYLALVRVYTKKPGNAPDLGPEDGIILRGGATIEHCCHALHRSIAAQLRY AIVWGTSTKFSPQRVGLHHKLDHEDVIQIVKK" gene <398960..>399683 /locus_tag="CAEBREN_22120" /db_xref="WormBase:WBGene00160845" mRNA join(<398960..399040,399088..399422,399470..>399683) /locus_tag="CAEBREN_22120" /product="hypothetical protein" /db_xref="WormBase:CBN22120" /db_xref="WormBase:WBGene00160845" CDS join(398960..399040,399088..399422,399470..399683) /locus_tag="CAEBREN_22120" /note="contains similarity to Pfam domain PF05154; contains similarity to Interpro domain IPR007829 (TM2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53264.1" /db_xref="InterPro:IPR007829" /db_xref="PFAM:PF05154" /db_xref="WormBase:CBN22120" /db_xref="WormBase:WBGene00160845" /translation="MRKLVWILSVLLVITVAGDSSFLAEFEYPKEKFEKCIDSIKDED PADLRYISTNPLGPLVECHLLDNAYITCEEPVPLYGPGQTGQQPTNESYHDEGKCQRM GGYRAEDIEFTNVKCRVLPCIECRGSRTFRKLTPCIIYTGHYFLTTLLYSIFLGVVAV DRFCLGYSAMAVGKLMTLGGFGIWWIVDIFLLVLGVLGPADDSNWEPYY" gene <400461..>400806 /locus_tag="CAEBREN_13488" /db_xref="WormBase:WBGene00152213" mRNA join(<400461..400515,400562..400665,400708..>400806) /locus_tag="CAEBREN_13488" /product="hypothetical protein" /db_xref="WormBase:CBN13488" /db_xref="WormBase:WBGene00152213" CDS join(400461..400515,400562..400665,400708..400806) /locus_tag="CAEBREN_13488" /note="contains similarity to Interpro domain IPR020149 (Uncharacterised protein family C02F5.10)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53196.1" /db_xref="InterPro:IPR020149" /db_xref="WormBase:CBN13488" /db_xref="WormBase:WBGene00152213" /translation="MDTKKKEESSSKSDSSKNVTSSTGEALQNCTESEWDASDEPYSA ELLNVKKKPNRVNVFSATEKNMDTVIVTEVSPPSTPLPKSV" gene <401631..>403435 /locus_tag="CAEBREN_08660" /db_xref="WormBase:WBGene00147385" mRNA join(<401631..401707,401764..401829,401946..402175, 402220..402348,402397..402679,403038..403137, 403238..>403435) /locus_tag="CAEBREN_08660" /product="hypothetical protein" /db_xref="WormBase:CBN08660" /db_xref="WormBase:WBGene00147385" CDS join(401631..401707,401764..401829,401946..402175, 402220..402348,402397..402679,403038..403137, 403238..403435) /locus_tag="CAEBREN_08660" /note="contains similarity to Pfam domain PF00560; contains similarity to Interpro domains IPR001611 (Leucine-rich repeat), IPR003603 (U2A'/phosphoprotein 32 family A, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53252.1" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR003603" /db_xref="PFAM:PF00560" /db_xref="WormBase:CBN08660" /db_xref="WormBase:WBGene00147385" /translation="MVKLSESAVYIRTKCSIENVKKLNLWGCGIDDIQVCEKMGLLEI LSLSVNEVKSLAPLQNCKNLKELYLRKNCIESLDELEYLKDLPNLRTLWIDENPCVGD GGQEYRRKVIRILPNITKLDDKPVTQSDHQEAMEDSIPECDMHTSLYSARSNRSNSID LMSRSVYVGPTVVDRIVQPQLLNFVENSDEERIAYPARSFSVEVPGMPMTEEHTTVYL ESAPGSHRGSRHNLMSQSMYGTLCSTLTEEPSSADGDDDWNDFSIEEDRVMVPVPLAA SHRMYQSMHEGMVMEMKRPVYGRSVSMPRRRVPTNTTRASSMSPAREQRLTKIMSAVS VLLDELDPDGLRQVVDEAQRRLKKQR" gene <403908..>410440 /gene="Cbn-ncr-2" /locus_tag="CAEBREN_10869" /db_xref="WormBase:WBGene00149594" mRNA join(<403908..404034,404166..404668,404703..404825, 405124..405290,405464..405545,405595..405732, 405784..405987,406034..406183,406233..406423, 406484..406883,406930..407178,407226..407336, 407385..407568,409314..409559,409603..409821, 409869..409963,410009..410122,410171..>410440) /gene="Cbn-ncr-2" /locus_tag="CAEBREN_10869" /product="CBN-NCR-2 protein" /db_xref="WormBase:WBGene00149594" CDS join(403908..404034,404166..404668,404703..404825, 405124..405290,405464..405545,405595..405732, 405784..405987,406034..406183,406233..406423, 406484..406883,406930..407178,407226..407336, 407385..407568,409314..409559,409603..409821, 409869..409963,410009..410122,410171..410440) /gene="Cbn-ncr-2" /locus_tag="CAEBREN_10869" /note="contains similarity to Pfam domains; contains similarity to Interpro domain IPR003392 (Patched)" /codon_start=1 /product="CBN-NCR-2 protein" /protein_id="EGT53247.1" /db_xref="InterPro:IPR003392" /db_xref="WormBase:CBN10869" /db_xref="WormBase:WBGene00149594" /translation="MRTVSVVFLLLMHSSWCHSKCVMTECDGELGATHPPCQTNSSNN LPINVTRQQNSEFFENLNKFCSHMIQDDKEIQVCCTDLQIKGMNTRLSYGSSILGSCP SCFDNFAKLWCQFTCSPRQSDFMKVIRTSGPLKIVEKVEYSVNRDFTDGLYNSCKDML FVNRPALSLLSLGGKVSFENFFGFMGKKNDENQIPMDTDFRQSRDKASLMNAMNLPTT PCHKSAGPNLMACGVVDCPTNSGELLDLRGAERTVICHPWKCVLFGLFLAAVSCSGNS RFHSLAHSIDQVSAANGETRQHQKTFIETFGPTHRIEQVFINIPPSMKSMFNGSLYEE LFQLIENIKNLTVQFHNSKIQLNDICYKPKGNKYGCAIMSPTNYFKNSWEVFSKTVDE DNFIYDAVDEYWESWEVLKQCVREPFVLKCHGEFGGPIDPELVFGNFSSSVQGSEKYD SARTIMITLPVRGPEEKAIAWEEAFIKMMRNYRMKHGTITFMTESSVTTELQEAVETD KIVSVLACAAVLLWVFTMLGSYHWPESSFLSAVVHHKLLIAIVAVMINIISVWCSIGV YSLFGVHATDNAIVVLFFVITCIGINRIFVTIRTFQVNGHCYGLPNISNAEINHRITD TMRRSIPIVLTNSLICATCFFLAGGVPPYVSVSMPAVEVFARHAGLAILFDTAFYLLV ILPLFQYDARREMYGRCEIWPWYRLSDETKTDICMEATGGTLRSPVDWFKIAIAPLIL NSFYRILALILFFFTLSCSVYFALKLQYGFDQTMAFSKTSYLTKHFQNMNENLNVGPQ VYFVVEGKVNWHDWKTQKKFCSVPGCDEDSVGNKIRRLTFAKNHLGNFLRGEFNNWLD TYIQFMSPTGTCCKMDGQKFCDPSNANHCSSCSSKTSLLSTESEFYRNLNQYLNTQPS VHCAHGGSILAKESINFTSDGQISAVYFQSNFKKLNLSDSNELYDAWRFAKFLSDDLE KSLGLPNVKVFAYSTFFPYYEQYLTLGETIITLVVIVLVVTFFTIAMFLRVNIAGSAV TVFVLLSSYLHFMGWMYLQGITVNVVSAINMTMSLGIAVEFFDQILHGFYNSKKLKSE ERALAAIVNNGATTLSGLFPAIMLTAFCLLFADSRVLITYFCNQLFGIGFVCAIHGVV YMPTLLAVFGPDYYENIRSDDESSEESDRHGTKTSSSSTSETAV" gene <410868..>412428 /locus_tag="CAEBREN_16751" /db_xref="WormBase:WBGene00155476" mRNA join(<410868..410929,410979..411074,411119..411202, 411251..411511,411563..411820,411867..411974, 412020..412133,412183..412286,412337..>412428) /locus_tag="CAEBREN_16751" /product="hypothetical protein" /db_xref="WormBase:CBN16751" /db_xref="WormBase:WBGene00155476" CDS join(410868..410929,410979..411074,411119..411202, 411251..411511,411563..411820,411867..411974, 412020..412133,412183..412286,412337..412428) /locus_tag="CAEBREN_16751" /note="contains similarity to Interpro domains IPR000754 (Ribosomal protein S9), IPR014721 (Ribosomal protein S5 domain 2-type fold, subgroup)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53222.1" /db_xref="InterPro:IPR000754" /db_xref="InterPro:IPR014721" /db_xref="WormBase:CBN16751" /db_xref="WormBase:WBGene00155476" /translation="MLRIALTRSSRAMSVASQASASDSETSVRKIGKALETYLKNSQQ HVAMMEKHRAEFETGRRHLAKMMSLDIHELDQAAIDRAIQYLFPSGLTDPNARPVMRP PDEILPKFQRFTFDEEGKPEGTRFFTLNPKIYGLLSEIGVKTQSVMKFYDEHVGSRSV NRSDLEPANLSGSQWITADKMKKKLSEKFTNELYGQVIIAFEHLASLPGSAIEQKFLS EFREPMTASTGSKLFGPAIPEVKVCAETNRRYAEVTTHCKDTRATVKVTDAGKGTFNI DGLQLHDFRHLQAREILLAPMIISQTLGRFDVTATTECISNTLPEAPNREPFKRSGGM SALPRAVRHGTALCVAALHPESIEPLRLSGLLTLDPRKNERSKVNQPGARAKWIWKRR " gene complement(<412610..>412969) /locus_tag="CAEBREN_06596" /db_xref="WormBase:WBGene00145321" mRNA complement(join(<412610..412813,412868..>412969)) /locus_tag="CAEBREN_06596" /product="hypothetical protein" /db_xref="WormBase:CBN06596" /db_xref="WormBase:WBGene00145321" CDS complement(join(412610..412813,412868..412969)) /locus_tag="CAEBREN_06596" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53194.1" /db_xref="WormBase:CBN06596" /db_xref="WormBase:WBGene00145321" /translation="MSKSGKKSKPKYALEDIQKIPNLLAFMVCKGNAIVHNTFPESDN PRQIAYNGMRMATRTQGSELRDSNIHTIQVQYDDFQVEMFQIGCHFCIVKKRLDTSE" gene <413271..>414773 /locus_tag="CAEBREN_31901" /db_xref="WormBase:WBGene00193866" mRNA join(<413271..413368,413485..413899,414074..414254, 414306..414541,414600..>414773) /locus_tag="CAEBREN_31901" /product="hypothetical protein" /db_xref="WormBase:CBN31901" /db_xref="WormBase:WBGene00193866" CDS join(413271..413368,413485..413899,414074..414254, 414306..414541,414600..414773) /locus_tag="CAEBREN_31901" /note="contains similarity to Pfam domain PF03265; contains similarity to Interpro domain IPR004947 (Deoxyribonuclease II)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53312.1" /db_xref="InterPro:IPR004947" /db_xref="PFAM:PF03265" /db_xref="WormBase:CBN31901" /db_xref="WormBase:WBGene00193866" /translation="MRGLLFLLILILIFSTVNAKYQCKSLRGKSVDWFVVYKLPKLTG STTGKEFVYIDSDSSDWTRGNDINDPNVAIGATISQMYSADKSNNFLFMYSDDDPIKP ADSYRGHAKGVSLFDSTTGFWLIHSVPNFPPMKTYSYPNTAEKYGQSFFCSSMEVQHL AELAEHWKYIQATPYLINVPEKYAIRFPTLKNVEAKQSIPRSATQFWISKPIKTVQGV TLMAYAKHKKFDGDIWNDIISKENKVTLAVESWLNGSGDDIHTTCTSSSQTHDVTEMR VTGLNFASSKDHSKWAVSNTQTNPIVCFGDMNRQRSQLKRGGGALCIQNRNLWQIYHS SVIQVEPCKGSSRYSLNSFIQTAVFCLFVSVTV" gene complement(<416467..>418988) /gene="Cbn-clec-160" /locus_tag="CAEBREN_21668" /db_xref="WormBase:WBGene00160393" mRNA complement(join(<416467..416524,416625..417308, 417357..417553,417675..417758,417806..418014, 418070..418157,418207..418429,418478..418555, 418618..418739,418782..418867,418910..>418988)) /gene="Cbn-clec-160" /locus_tag="CAEBREN_21668" /product="CBN-CLEC-160 protein" /db_xref="WormBase:WBGene00160393" CDS complement(join(416467..416524,416625..417308, 417357..417553,417675..417758,417806..418014, 418070..418157,418207..418429,418478..418555, 418618..418739,418782..418867,418910..418988)) /gene="Cbn-clec-160" /locus_tag="CAEBREN_21668" /note="contains similarity to Pfam domain PF00092; contains similarity to Interpro domains IPR016186 (C-type lectin-like), IPR001304 (C-type lectin), IPR002035 (von Willebrand factor, type A)" /codon_start=1 /product="CBN-CLEC-160 protein" /protein_id="EGT53172.1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR002035" /db_xref="InterPro:IPR016186" /db_xref="PFAM:PF00092" /db_xref="WormBase:CBN21668" /db_xref="WormBase:WBGene00160393" /translation="MVLQMLLYTWSFFFIYSILPAIISANECYVTPCTRDIIIVVDGS SSMQTSTYVSQEINMITKLTYSWTLDESKVRLALVGAYFGNEFNGLDYFTDSSLVEKR LQSFRLAAMQYGLFSGNFNTTVRFLDERYVGKRANFGPRINVQKRIVIFSSHSGTSDI SSTKNTLEQFSQQGYEVTIVGIGVDESVYKGTYYHKFVSVQWFELGVVAQSIIDTITE EGICFLDKGWTTPKPQTCTTTTTTTTTRAPTTTTAKGVTAKTVTSKPTTSPKPVPPTH PPFPVGDYQECSCTTQSLYIDIVFVVDTSAGMGLGGLMMVKAEINTLTVFKPSDYDNE DEFTEDLWTDPRLEDVDETIDEVNLHAGLQQAAKMLGSMRNGVKKVVVVYAASYNDEG NDDPRQIAANIRGSGHKIITVAFVEPESSSLVLKMAEIASPRMNFTSYRDDLLVEELE DAFCQVRKKEFILFLFHKFQVNCYCPRGWRQLTLENRTYGECFFPTKIDASWTATKYE CPILSKEHTGNGHLVYVNSALKNTFLNNFYMENWDKENQEKPNYDIGYYYDKTTQKYI WVNGVTNNPYANWAENHPDLSKGECVMAKQVEGTTTDFKWISINCQVDSGRGLCQEAA CDSDFYCPPEN" assembly_gap 422000..423031 /estimated_length=1032 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 424190..428205 /estimated_length=4016 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 429856..430857 /estimated_length=1002 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <440422..>451388 /gene="Cbn-mig-10" /locus_tag="CAEBREN_11626" /db_xref="WormBase:WBGene00150351" mRNA join(<440422..440533,447012..447107,447282..447433, 448551..448718,449713..449886,449934..450018, 450065..450880,450936..451088,451138..>451388) /gene="Cbn-mig-10" /locus_tag="CAEBREN_11626" /product="CBN-MIG-10 protein" /db_xref="WormBase:WBGene00150351" CDS join(440422..440533,447012..447107,447282..447433, 448551..448718,449713..449886,449934..450018, 450065..450880,450936..451088,451138..451388) /gene="Cbn-mig-10" /locus_tag="CAEBREN_11626" /note="contains similarity to Pfam domain PF00169; contains similarity to Interpro domains IPR001849 (Pleckstrin homology), IPR011993 (Pleckstrin homology-type), IPR000159 (Ras-association)" /codon_start=1 /product="CBN-MIG-10 protein" /protein_id="EGT53327.1" /db_xref="InterPro:IPR000159" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR011993" /db_xref="PFAM:PF00169" /db_xref="WormBase:CBN11626" /db_xref="WormBase:WBGene00150351" /translation="MDTYDFPDPYPVQIRARPQVPPKPPIDTVRYSMNNIKESADWQL DELLEELEALETQLNSSKGGDQLLLGVSGIPASSSRDHVKQVSTLPPPPPALSYHASQ QQSQHIHHHLGYQNGIHQMNSMTNTSASSCSSPDGDSAFGDSSSTESSNNRCRNSAFS SNDSCRDSLNTPSPTQVSPRNGGELSAEEAKALKIRQALEKMKEAKVTKIFVKFFVED GQPLQMLIDERWTVADTLKQLAEKNHIALMEDHCIVEEYPELYIKRVYEDHEKVVENI QMWVQDSPNKLYFMRRPDKYAFISRPELYLLTPKTSDHMEVPAGDQWTIDVKQKFVHD YFNREPVVPPEMEGFLYLKADGRKSWKKHYFVLRPSGLYYAPKSKKPTTKDLTCLMNL HSNQVYTGVGWEKKYKSPTPWCISIKLTALQMKRSQFIKYICAEDEMTFKKWIVALRI AKNGADLLQNFERACQIRRETLGPVSGMSAASSSTAISEVPHNLHQRTPSVASSIQLG SHLINNPITTRPLSVNVRNQSPASFSVSSSQPSQPSPSIVSEKMEVQYDEQPTGTIKR APLDVLRRVSRASTSSPTIPQEESDSDEEFPAPPPVVSAIRMPPPVTPPKPCTPLSAK KAPPPPPKRSENTKLQTATPMAPAKNDLEAALARRREKMASMEA" assembly_gap 442452..442805 /estimated_length=354 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<451619..>452068) /locus_tag="CAEBREN_07567" /db_xref="WormBase:WBGene00146292" mRNA complement(join(<451619..451914,451963..>452068)) /locus_tag="CAEBREN_07567" /product="hypothetical protein" /db_xref="WormBase:CBN07567" /db_xref="WormBase:WBGene00146292" CDS complement(join(451619..451914,451963..452068)) /locus_tag="CAEBREN_07567" /note="contains similarity to Interpro domain IPR015517 (Cytidine deaminase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53326.1" /db_xref="InterPro:IPR015517" /db_xref="WormBase:CBN07567" /db_xref="WormBase:WBGene00146292" /translation="MYMARMQSEMSEEKYPAGCYIVDHEHYQIVSGYSGEVKSKEDSC NCAMLSAIHKMKRKYHIGKDFIMYISRFPSCSPCLERIQEMRISKIWYWSTDGTIEES NAHIQSFARENGIELEKYIPTKTISLTFQES" gene <452359..>453404 /locus_tag="CAEBREN_11109" /db_xref="WormBase:WBGene00149834" mRNA join(<452359..452397,452464..452785,452838..453026, 453074..453148,453202..>453404) /locus_tag="CAEBREN_11109" /product="hypothetical protein" /db_xref="WormBase:CBN11109" /db_xref="WormBase:WBGene00149834" CDS join(452359..452397,452464..452785,452838..453026, 453074..453148,453202..453404) /locus_tag="CAEBREN_11109" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53244.1" /db_xref="WormBase:CBN11109" /db_xref="WormBase:WBGene00149834" /translation="MMLMMNRARKLSFSQVAPVVRNSEFKEKDARIAPLCKTRAALLQ KPCGKVAVVAPPSFPDFRSTIPYFFPLFQEVSNILKAMDPSREDNEWLRHPNFTHFWK NHAICTEWMKRNIFANHKAQTSSFSPAGASVTDEFYSIEEPEVTERLSRCEIQMNDQD PEIEVMSNEMKEFYAKTHEHRQKLKEKREAEMEKEKTVKKVEYVDIDQISVRGRIEHS TDQRDVNTEFMEKREKAKKDYGDAAMKLLAMESAIEMRFESEFALNPQLWPNIPFRF" gene <453541..>454899 /locus_tag="CAEBREN_06784" /db_xref="WormBase:WBGene00145509" mRNA join(<453541..453881,454093..454206,454491..454606, 454653..454758,454803..>454899) /locus_tag="CAEBREN_06784" /product="hypothetical protein" /db_xref="WormBase:CBN06784" /db_xref="WormBase:WBGene00145509" CDS join(453541..453881,454093..454206,454491..454606, 454653..454758,454803..454899) /locus_tag="CAEBREN_06784" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53328.1" /db_xref="WormBase:CBN06784" /db_xref="WormBase:WBGene00145509" /translation="MGKKKFFENEDGTTEVQETETEESKPEKEKAYRMKKLGANIRTS KKSFREQFFMSYEDGLKMIKKMRGKGKGGQLVQKKMPRHISLPYHMSGKAAMEEACNW ISQNTVGKYRPEYKGIVVAVGNVETLSPPRVIADQLAFHQDVAINQIVFIPKLGDQYE AKVKYVQEGLMVGVVMDMITIHVKQNNKTHEDHVAIDDKILVKYGGIRIKNSLCHLRG DYVKMVEKAEIKEEIVEDEEAVEEATEVKEEIEEDDMEE" gene complement(<456313..>456438) /locus_tag="CAEBREN_25226" /db_xref="WormBase:WBGene00163951" mRNA complement(<456313..>456438) /locus_tag="CAEBREN_25226" /product="hypothetical protein" /db_xref="WormBase:CBN25226" /db_xref="WormBase:WBGene00163951" CDS complement(456313..456438) /locus_tag="CAEBREN_25226" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53185.1" /db_xref="WormBase:CBN25226" /db_xref="WormBase:WBGene00163951" /translation="MGKKKVKKIMKRLKTIAFIRILISNRSNFEDKIKKIWKFLQ" gene <456644..>458342 /locus_tag="CAEBREN_22817" /db_xref="WormBase:WBGene00161542" mRNA join(<456644..457028,457631..458176,458233..>458342) /locus_tag="CAEBREN_22817" /product="hypothetical protein" /db_xref="WormBase:CBN22817" /db_xref="WormBase:WBGene00161542" CDS join(456644..457028,457631..458176,458233..458342) /locus_tag="CAEBREN_22817" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53224.1" /db_xref="WormBase:CBN22817" /db_xref="WormBase:WBGene00161542" /translation="MASRPRRGTAATLIKKEVKKEEDDVQVVEDDDDVDEDEGPPPLE REASCGENDDTDGETKEGDNESMTPNDLKEDDGVDSKNTINLLEALSSVFNTDSDKKK KGSPPILDAGSLKFLSSTPLPTRSAAIPKALLLKKNSNSMPSTSSSNRPTNLRPMNSN ESKKYGVPPPIPQALRNIAANLSTAPVVGSNTSLGPARLLENRKRQNDRGLEAGSSKR PTGLVAYNGGRAGEKFQTVPTTSSKSSGTATPSAPFDVSSFLRNQSPVRMQVSVGGEH DNGDSMQQAFEMAASQKETIGNIAKASTNQSILLGSLVLNGLNTLQNRSSEEYNSFVG DLFSLITKYKIQ" gene complement(<458496..>458663) /locus_tag="CAEBREN_02309" /db_xref="WormBase:WBGene00141034" mRNA complement(<458496..>458663) /locus_tag="CAEBREN_02309" /product="hypothetical protein" /db_xref="WormBase:CBN02309" /db_xref="WormBase:WBGene00141034" CDS complement(458496..458663) /locus_tag="CAEBREN_02309" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53259.1" /db_xref="WormBase:CBN02309" /db_xref="WormBase:WBGene00141034" /translation="MRIPKKSQKSNFPKSCSDEVLRFEFIISLNTLSSYFHSINLKLI LKFPSQSNKKR" gene <458925..>459973 /locus_tag="CAEBREN_14711" /db_xref="WormBase:WBGene00153436" mRNA join(<458925..458930,458983..459397,459441..>459973) /locus_tag="CAEBREN_14711" /product="hypothetical protein" /db_xref="WormBase:CBN14711" /db_xref="WormBase:WBGene00153436" CDS join(458925..458930,458983..459397,459441..459973) /locus_tag="CAEBREN_14711" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53267.1" /db_xref="WormBase:CBN14711" /db_xref="WormBase:WBGene00153436" /translation="MAWFMAILGIATVVATFIPSLIKGPEPPPPKPAPPPTHPTHPPT SRPMETFPTFPPLPPITPAPTTEMDYTPGIILIVVLFLIFISCSAGGAWWYMRKKREK EMAKMSMGFDDYYDTESGTMSGTGTSTFGTTSSMGTTTGTTRKTRTTKSGTTTGATKN KKDKKKKKKKDKKKKEKTGTHKEDAAKSPLPLSPIPSNPAIPSVPSSTPGTGPTPAIP AESPAPDPAAPAAPTTGSALAAAVFPTTTPDPAQASPAPAQSAPAPNGDQADQPSLDN TAPSWNPIGGLFSTAPQPDAPAAAPAPEQASLQPPPQPPAQ" gene <460491..>461593 /locus_tag="CAEBREN_17863" /db_xref="WormBase:WBGene00156588" mRNA join(<460491..460556,460697..460781,460824..461102, 461210..461331,461378..>461593) /locus_tag="CAEBREN_17863" /product="hypothetical protein" /db_xref="WormBase:CBN17863" /db_xref="WormBase:WBGene00156588" CDS join(460491..460556,460697..460781,460824..461102, 461210..461331,461378..461593) /locus_tag="CAEBREN_17863" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53226.1" /db_xref="WormBase:CBN17863" /db_xref="WormBase:WBGene00156588" /translation="MNSSSKLVGSSVSSTNEKTEDDLIGGMNKLELLECCHFYCVECT PQNQAKEKHTSCITSTSPSSAFTREISPQQIAEHDGELSQDAGERGNIRGSNRPSRKA LHNKSNRNKKKKLKKGPDQLLFFFLHMNKPVVVSLATDATYGDLISRLCTVLGVDGKT NDIHLRTQKSSSEEGEDQSSRGDPALLDAVDSKARLSDLRIPRQKMLILDVEPKKKQG SAEDSKKDQKKNDKDKNGTREDVPSLSQSRAEEPKST" gene complement(<462123..>462868) /locus_tag="CAEBREN_24800" /db_xref="WormBase:WBGene00163525" mRNA complement(join(<462123..462269,462311..462449, 462633..462799,462845..>462868)) /locus_tag="CAEBREN_24800" /product="hypothetical protein" /db_xref="WormBase:CBN24800" /db_xref="WormBase:WBGene00163525" CDS complement(join(462123..462269,462311..462449, 462633..462799,462845..462868)) /locus_tag="CAEBREN_24800" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53163.1" /db_xref="WormBase:CBN24800" /db_xref="WormBase:WBGene00163525" /translation="MPVFNVTDNSSTISVYPAPDGVVATILLFMFSVTFLAICCPFIC CCAIIAIVWLIVTRRRPNGYSKVELLVFHSVTLSMVSFRKLLKSSNIQTFSFHPRIRK NNSKMAKSTTQFSQTTVLLLYTVWSMFTCFCYVAICIVVWFLAKKKFDKPNATSAA" gene complement(<463235..>463487) /locus_tag="CAEBREN_00810" /db_xref="WormBase:WBGene00139535" mRNA complement(join(<463235..463438,463485..>463487)) /locus_tag="CAEBREN_00810" /product="hypothetical protein" /db_xref="WormBase:CBN00810" /db_xref="WormBase:WBGene00139535" CDS complement(join(463235..463438,463485..463487)) /locus_tag="CAEBREN_00810" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53232.1" /db_xref="WormBase:CBN00810" /db_xref="WormBase:WBGene00139535" /translation="MAKSSSTTVDSTIVVALFIVLFVIGICCSIASAVALFFILRKKK DNSAALAVPPQTPGTPQIIVVQDQ" gene complement(<464798..>467799) /gene="Cbn-sas-4" /locus_tag="CAEBREN_21220" /db_xref="WormBase:WBGene00159945" mRNA complement(join(<464798..465098,465145..465201, 465248..465354,465539..465697,465749..466198, 466251..466768,466813..467026,467099..467446, 467560..467655,467707..>467799)) /gene="Cbn-sas-4" /locus_tag="CAEBREN_21220" /product="CBN-SAS-4 protein" /db_xref="WormBase:WBGene00159945" CDS complement(join(464798..465098,465145..465201, 465248..465354,465539..465697,465749..466198, 466251..466768,466813..467026,467099..467446, 467560..467655,467707..467799)) /gene="Cbn-sas-4" /locus_tag="CAEBREN_21220" /codon_start=1 /product="CBN-SAS-4 protein" /protein_id="EGT53296.1" /db_xref="WormBase:CBN21220" /db_xref="WormBase:WBGene00159945" /translation="MQPSENNEEDGGRKPTRPFLRKGEGTARFRMANNERRLQRESAD YHKSPIESPAISLPRFTPSNGIPTSARTVDSGISNEDETRPPTTASLPMDNPSSSPLN HFDHQNMTTPSVIEEQDDSGRHVESEDHIERVSARQTFASREGTSSPVEPCSEVSTEA GDLRAHAERLRNLAPNVNSMKSYSTTPSSYASSMTPPKAQSTPKTFEEEETTFHPPPF EPSSYHQPISSLSSASLETPQARPFASNRANFAQNEAQTGISLLNNQPRRRVVPPSQQ QAFSSSSQEQKENMNNDHIHDVSEHVYDQPLQGPGRHGKQLNEIEKRKKLEHNLKIQL RDAIAHLDYSSEEVWKTKKRLVEDFEKAKEKLSVARKDLEEEYRKKIESFQEDMKSEE ERLQRERRELEREKKILQKGKGEREKELMTMNSTLREKLTNSETHNSKLRQDIRTLND KLKKKDEEIEKITKDYNRSKSTCQTLEKRIKQLRNEKEKDEKEKELFAIAATNRKSPY PMALNQSLGTTTAITPSVVSTRNPSVSSLATNKKTNKGRTVSFADDPQEQSLEVLEDP IPSEPLMTLHETISTELGKCNLYKDALGETTRTYPTIASGILYEFQNGDFRWGNHPTS VLLEVLRPGDNATLISVKRREIRTELYGLDDGTYYTEVFDKTGRFVTKSIHEEVNKKI NLGTPYSHRDNGARYVEYRTAFDDFELIEPEFRLRWYKGELMVCKIFKRPESNEKTLR FELNIVTGSVILETVEDQLKNGVSQKQTVFTWPHQKSITY" gene complement(<468090..>468498) /locus_tag="CAEBREN_05924" /db_xref="WormBase:WBGene00144649" mRNA complement(join(<468090..468357,468434..>468498)) /locus_tag="CAEBREN_05924" /product="hypothetical protein" /db_xref="WormBase:CBN05924" /db_xref="WormBase:WBGene00144649" CDS complement(join(468090..468357,468434..468498)) /locus_tag="CAEBREN_05924" /note="contains similarity to Pfam domain PF08524; contains similarity to Interpro domains IPR013730 (rRNA processing), IPR009149 (BR22)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53280.1" /db_xref="InterPro:IPR009149" /db_xref="InterPro:IPR013730" /db_xref="PFAM:PF08524" /db_xref="WormBase:CBN05924" /db_xref="WormBase:WBGene00144649" /translation="MVNRSKPDDAAKTKEVPKKVKSKKPKKMSFAQAQDVYLRLKQEK EEEKQRERAEREKRNETIAATNKSRKKMNHALAKRNKKGQPNLNAQMDVLLEKIQKRV DNEKKGKK" gene <469664..>470059 /locus_tag="CAEBREN_16407" /db_xref="WormBase:WBGene00155132" mRNA join(<469664..469810,469958..>470059) /locus_tag="CAEBREN_16407" /product="hypothetical protein" /db_xref="WormBase:CBN16407" /db_xref="WormBase:WBGene00155132" CDS join(469664..469810,469958..470059) /locus_tag="CAEBREN_16407" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53239.1" /db_xref="WormBase:CBN16407" /db_xref="WormBase:WBGene00155132" /translation="MPKQDFSYQDLLGVVAVWCCFFAIIGIITVTCVNFYCIHKHDDV TVLEKWGRRKRLGIRLGVHNRATIDEQIALQKFKDDKN" gene complement(<470646..>472488) /locus_tag="CAEBREN_14710" /db_xref="WormBase:WBGene00153435" mRNA complement(join(<470646..470711,470760..470979, 471029..471355,471429..471544,471929..472045, 472101..472208,472408..>472488)) /locus_tag="CAEBREN_14710" /product="hypothetical protein" /db_xref="WormBase:CBN14710" /db_xref="WormBase:WBGene00153435" CDS complement(join(470646..470711,470760..470979, 471029..471355,471429..471544,471929..472045, 472101..472208,472408..472488)) /locus_tag="CAEBREN_14710" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53217.1" /db_xref="WormBase:CBN14710" /db_xref="WormBase:WBGene00153435" /translation="MVTVIPKIITTPYPRTRLPMYLYALSIYFPFVAAPIIIFISSSW LIIGLHYSNSSCILAFNFMEMPSAVFCSLLGGISSVIEIHFSIDVVNVQWTDQWLLSA KFEQNTSVNKKMNQSKKDSIGKSNEKKRKNAVCKRVEEVGIPTVFTPVPSVESCLADE QSRLRRLREPAPPSQVTSDLSSEKLNDSTDSTVKKPWTKGDCSVVDTRKSTMVLIKVY FMQNSFTSFELATDRTLLVLLRCVLNEISKEIRNKFSFYVFASPYDVIWKRPRCELMK KPPPSSIFRYMLTPSQMNMTLSELFSDVKLEGLENMNIYIFIKNMEEKCNHDECQTTH KSWKFQQVIN" assembly_gap 475369..480819 /estimated_length=5451 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<480917..>481363) /locus_tag="CAEBREN_02468" /db_xref="WormBase:WBGene00141193" mRNA complement(join(<480917..481123,481172..>481363)) /locus_tag="CAEBREN_02468" /product="hypothetical protein" /db_xref="WormBase:CBN02468" /db_xref="WormBase:WBGene00141193" CDS complement(join(480917..481123,481172..481363)) /locus_tag="CAEBREN_02468" /note="contains similarity to Pfam domain PF00102; contains similarity to Interpro domain IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53256.1" /db_xref="InterPro:IPR000242" /db_xref="PFAM:PF00102" /db_xref="WormBase:CBN02468" /db_xref="WormBase:WBGene00141193" /translation="MKKFSGSWLEDEYDQTIRQIAGTESQVSSGKSGTSGGSEAQGPE DENKADITPMEAFNAVTMEGDALLGDMHGAAMAFPNTFDKCLNNMELNRIPHLYCYDH SRVELTPKNGTGDYYHASWVDGYNKKCLSS" assembly_gap 482057..482244 /estimated_length=188 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <483419..>484036 /locus_tag="CAEBREN_13299" /db_xref="WormBase:WBGene00152024" mRNA join(<483419..483433,483632..>484036) /locus_tag="CAEBREN_13299" /product="hypothetical protein" /db_xref="WormBase:CBN13299" /db_xref="WormBase:WBGene00152024" CDS join(483419..483433,483632..484036) /locus_tag="CAEBREN_13299" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53173.1" /db_xref="WormBase:CBN13299" /db_xref="WormBase:WBGene00152024" /translation="MLLFLVFLLLTCQLSSGETEVNITSSEKLDNLTHPGKAIYIPSS SEEEQLDSEEISLETILSKAKEFDETTTPDIPYLPLIQRCSIDADCSSETACYDGKCI NAKRDQLFPYMFQRCQSRLDCPSGHRCIISMCIPFRW" gene complement(<484891..>487817) /locus_tag="CAEBREN_24593" /db_xref="WormBase:WBGene00163318" mRNA complement(join(<484891..484996,485043..485353, 485398..485713,485758..485907,485957..486076, 486127..486348,486390..486533,486580..486699, 486745..486943,486986..487085,487130..487347, 487395..487532,487640..>487817)) /locus_tag="CAEBREN_24593" /product="hypothetical protein" /db_xref="WormBase:CBN24593" /db_xref="WormBase:WBGene00163318" CDS complement(join(484891..484996,485043..485353, 485398..485713,485758..485907,485957..486076, 486127..486348,486390..486533,486580..486699, 486745..486943,486986..487085,487130..487347, 487395..487532,487640..487817)) /locus_tag="CAEBREN_24593" /note="contains similarity to Interpro domain IPR013783 (Immunoglobulin-like fold)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53220.1" /db_xref="InterPro:IPR013783" /db_xref="WormBase:CBN24593" /db_xref="WormBase:WBGene00163318" /translation="MRKLLIFVLITLQFAAVISNRNISSTASELLDLQVEKCPQVLGC RCVADSKQDIQCFSIDESKLLELERVYGPDIRRLEIHKWQNDQLNLDAFSPFRQLETL ILEDGELELLNGTIKQSSLKVLSLRNSEITSDSEVCHIISLLPNLHNLTISKNYFEKF ECDLKNTKLKILDLSLNQLTHLKLPNTVRSLNVSRNRLTSFENISTELSDLDISFNAL SSWPSTEKWRLPNLKTFSVAKLELETGFELYAPQLESLNIDGASLRFLDFYQIKTPKL KKFSGRHLVQLKNVAGHLPSTINSVGLTNTMLRTLPADFLPSSSFAADKTSTRTSFEF STDKLICHKCLLKWSLPVFSQTNIRKECNFTREEIAKEDCKLGVVNDTGIQYGKYEKP TPISCFSYGDSPVTISWWRFRPAERLGSYDPVTNKISYSNVSAEMRESYVIQSGGSLL INSPNRSHVERYVCVAENKHGKEFGIYQFRLDYLDWYSFNVFHSVFWGGLATSLIVCL ISFLLNITWILTRKSALWWIQRAERLSRVRKMVEAMEKYRVRQMESLHEKYTKRVQIV RDNYHQQVEALRVSYAAQQEKFQNYKAAQVDAVHSHLDAMRDGYNNQLGRVREYGSKR AEQLWESYERQVNRMRTFSLQHRLKMMRQYKVKQRYVNELLESFQASSPEVQLENEEK VRAALEIPDDLGPIEGSIDTPSRLSRSSSFHSLPEYVIDEQGNVRPGIIPSSSASIRF PVKPTTSSISNGAGTSSPSSSGPQRSTDSPSKM" gene <489244..>490454 /locus_tag="CAEBREN_07518" /db_xref="WormBase:WBGene00146243" mRNA join(<489244..489293,489346..489463,489747..489952, 489996..490077,490121..490276,490323..>490454) /locus_tag="CAEBREN_07518" /product="hypothetical protein" /db_xref="WormBase:CBN07518" /db_xref="WormBase:WBGene00146243" CDS join(489244..489293,489346..489463,489747..489952, 489996..490077,490121..490276,490323..490454) /locus_tag="CAEBREN_07518" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53291.1" /db_xref="WormBase:CBN07518" /db_xref="WormBase:WBGene00146243" /translation="MGKHTKFDSSDDEVYKAEKRDKKDVKKEKKKEKRDRSRSPHKES DRSPKTDRHEEKNDSRRREDNDHGRRRDHGRDDRRDDRRDGRRDERREDRRGDRRDDR NNWKRDKNDRNDRRNDYQKREDKNRLSAEEIAAQRKALWGNKKPAAETPSNTDESTST SSEAASGGKNEKLWSSAIAATGVNSSQANKFMRLMGVKNAPKPTSDSSNLSAEKNRQD KMLNDLEKQYAIARETTHMGRGTGFGFGH" gene complement(<490684..>494772) /locus_tag="CAEBREN_10385" /db_xref="WormBase:WBGene00149110" mRNA complement(join(<490684..490819,490871..491004, 491056..491129,491172..491370,491420..491694, 491830..492005,492052..492371,492421..493007, 493091..493192,494595..>494772)) /locus_tag="CAEBREN_10385" /product="hypothetical protein" /db_xref="WormBase:CBN10385" /db_xref="WormBase:WBGene00149110" CDS complement(join(490684..490819,490871..491004, 491056..491129,491172..491370,491420..491694, 491830..492005,492052..492371,492421..493007, 493091..493192,494595..494772)) /locus_tag="CAEBREN_10385" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine-protein kinase domain), IPR020685 (Tyrosine-protein kinase), IPR001245 (Serine-threonine/tyrosine-protein kinase), IPR017442 (Serine/threonine-protein kinase-like domain), IPR008266 (Tyrosine-protein kinase, active site), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53174.1" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="InterPro:IPR020685" /db_xref="WormBase:CBN10385" /db_xref="WormBase:WBGene00149110" /translation="MRIHFFLFLLLLSFLNTNGYEQRSDCVETCSHHDTSQEFGDCLN NCSKKPRKDNLGDSSLFAYPPTDVQIQTKVIMDGGKILETTITWKAEEKDARREGFYI RYTAVNSSCQKHFPGYFTSSILAVSISVLFYLNHHKVQDERSLTIPAAFNGHALVIDH SCSYNLQIRAKPYPPGDDKYIIEKRHTVPDCIDKYCSCRPGDVAAIRDVSMDSEYHLN WKFNEVSGKEYHFYVDVYERYAILVKLFISDLNFRIAMPLIKKKGSEPEVEEYTFRIA NAEPYEISAKSSQIGSHMYQYQLPFQFIPFQQYKISIFAVDDSFCHNEDVFYIFNATN TTSPSSSFSDNGYKSSSFPELSGSAITKTNVLMESYALVIILVVVAVMSPICTAFALV ILRRRRKEKKKRHHFLHRRSLSCSRHSIIETNILYRPPNEVNGGTAGEWLIRGQDIVV GTVIGEGAFGQVFKGILRGPNGQVIPVAVKQLKANAIDEEKEEFVREIQMMQTVGQHD NIVTMYGYCMDDTLQCMIMEYVPYGDLKHYLQNMRKDKDTDSTIDSNEFLAFAGQVAC GMAHLESVGIIHRDLAARNILVGTGKVLKISDFGMSRPGIYIKMSKGVIPLRWLSPEA IKDNTYSNKSDVWAFGVLLWEIATLGGFPYNNVADKDILNQLTEGMRLEQPNKCSDDM YVLMKSCWNLKPEDRPTFISILNEVEQIKTADADAPPSDPPAKN" gene complement(<495826..>500260) /locus_tag="CAEBREN_13238" /db_xref="WormBase:WBGene00151963" mRNA complement(join(<495826..495921,495971..496130, 496180..496353,496404..496918,497465..497622, 498787..498936,500167..>500260)) /locus_tag="CAEBREN_13238" /product="hypothetical protein" /db_xref="WormBase:CBN13238" /db_xref="WormBase:WBGene00151963" CDS complement(join(495826..495921,495971..496130, 496180..496353,496404..496918,497465..497622, 498787..498936,500167..500260)) /locus_tag="CAEBREN_13238" /note="contains similarity to Pfam domain PF00156; contains similarity to Interpro domains IPR000842 (Phosphoribosyl pyrophosphate synthetase, conserved site), IPR005946 (Phosphoribosyl pyrophosphokinase), IPR000836 (Phosphoribosyltransferase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53329.1" /db_xref="InterPro:IPR000836" /db_xref="InterPro:IPR000842" /db_xref="InterPro:IPR005946" /db_xref="PFAM:PF00156" /db_xref="WormBase:CBN13238" /db_xref="WormBase:WBGene00151963" /translation="MFGGIRDRLFRFQRQNRRSRNEFFGQHPSQPGSEDILDPPPAGR TPARQTESLTEPPVPSQSSQPVVLNPSQIAKPENSPLDKSVEHSHLHKEHSIHHPTPP RSFFSSSSLAVHPNVETAQSSSEEDLRMPNIKVFSGSSHPDLSTRICERLQLEVSKAS LKKFSNKETNVEIGESVRGEDVYIIQSAAGEINDNLMELLIMINACKIASSCRVAAVI PAFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYA EPAILKYIKESIPNWQTSVIVSPDAGGAKRVTSIADRLNVDFALIHKERKRANEVEKM TLVGSVEGKVAILVDDMADTCGTICMAADKLVEAGAEKVYAFCVHGIFSGPALTRLNA SKFEAVVVTNTIPQDENMKKCSKIQCIDISMILAEAIRRTHNGESVSYLFSHVPIC" gene complement(<500606..>501929) /gene="Cbn-rpl-6" /locus_tag="CAEBREN_17922" /db_xref="WormBase:WBGene00156647" mRNA complement(join(<500606..500758,500978..501165, 501390..501573,501801..>501929)) /gene="Cbn-rpl-6" /locus_tag="CAEBREN_17922" /product="CBN-RPL-6 protein" /db_xref="WormBase:WBGene00156647" CDS complement(join(500606..500758,500978..501165, 501390..501573,501801..501929)) /gene="Cbn-rpl-6" /locus_tag="CAEBREN_17922" /note="contains similarity to Interpro domain IPR000915 (Ribosomal protein L6E)" /codon_start=1 /product="CBN-RPL-6 protein" /protein_id="EGT53189.1" /db_xref="InterPro:IPR000915" /db_xref="WormBase:CBN17922" /db_xref="WormBase:WBGene00156647" /translation="MVGKRNLPVISRNFDLSPGVLRFSASRLRLKKGEKKPKFTNTKD TKLPRLQRNGTKFALGHAKSVPLRKTLTPGTVLIVLAGRHKGKRVIFLKQLPQSGLLL VTGPHKINGFPLRRIGQSFVIATSLKVNVSGVKIPDHINDEYFKRKSTSQKTGKNIFA AGKTDYTVSEQRKKDIKTVDAPILAAIKKHPEHKFLFGYLGTRFSLGKNQYPHKMQF" gene complement(<502955..>505923) /gene="Cbn-dpy-31" /locus_tag="CAEBREN_08230" /db_xref="WormBase:WBGene00146955" mRNA complement(join(<502955..503033,503078..503203, 503298..503528,503573..503996,504049..504516, 504799..504891,504936..505092,505720..>505923)) /gene="Cbn-dpy-31" /locus_tag="CAEBREN_08230" /product="CBN-DPY-31 protein" /db_xref="WormBase:WBGene00146955" CDS complement(join(502955..503033,503078..503203, 503298..503528,503573..503996,504049..504516, 504799..504891,504936..505092,505720..505923)) /gene="Cbn-dpy-31" /locus_tag="CAEBREN_08230" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000884 (Thrombospondin, type 1 repeat), IPR001506 (Peptidase M12A, astacin), IPR006026 (Peptidase, metallopeptidase), IPR000859 (CUB), IPR013032 (EGF-like region, conserved site)" /codon_start=1 /product="CBN-DPY-31 protein" /protein_id="EGT53190.1" /db_xref="InterPro:IPR000859" /db_xref="InterPro:IPR000884" /db_xref="InterPro:IPR001506" /db_xref="InterPro:IPR006026" /db_xref="InterPro:IPR013032" /db_xref="WormBase:CBN08230" /db_xref="WormBase:WBGene00146955" /translation="MYTYILLFILLSTCTAHSLRDLSSQDEEGPPSSAPGVRKRRMMS EEDQKVVDYYMEKLNKLADEKHPEELQQRIEHPELKTWNRMKDSVLNPEEQGKFFQGD IVLFPDQAKALYEQALVEGKSRVKRKFIGSNLRRWDASRPIIYAFDGSHTQREQRIIE LALEHWHNITCLNFERNDQANSGNRIVFTDVDGCASNVGRHPLGEEQLVSLAPECIRL GVIAHEVAHALGFWHEQSRPDRDQYVTVRWENIDKDSKGQFLKEDPDDVDNAGVPYDY GSIMHYRSKAFSKFDDLYTISTFVTDYQKTIGQRDQLSFNDIRLMNKIYCSAVCPSKL PCQRGGYTDPRRCDRCRCPDGFTGQYCEQVMPGYGATCGGRINLSRSTTRLSSPGYPR EFKEGQECSWLLVAPPGHIVEFQFIGEFEMYCKVRHSLCMDYVEVRNSTDFANTGMRY CCYGTPPTRIRSATTDMVVLFRSFYRGGKGFEARARAVPEAGTWNAWSPWTACSASCG ACGSRMRTRTCPPGNACSGEPVETQVCNTQACTGMCAQKREEEGQCGGFLSLLRGVRC RQEKTVMAPCENACCPGFTLQRGRCVR" gene <510437..>511068 /gene="Cbn-pfd-5" /locus_tag="CAEBREN_10493" /db_xref="WormBase:WBGene00149218" mRNA join(<510437..510556,510602..510697,510745..510876, 510952..>511068) /gene="Cbn-pfd-5" /locus_tag="CAEBREN_10493" /product="CBN-PFD-5 protein" /db_xref="WormBase:WBGene00149218" CDS join(510437..510556,510602..510697,510745..510876, 510952..511068) /gene="Cbn-pfd-5" /locus_tag="CAEBREN_10493" /note="contains similarity to Pfam domain PF02996; contains similarity to Interpro domains IPR004127 (Prefoldin subunit), IPR011599 (Prefoldin alpha subunit)" /codon_start=1 /product="CBN-PFD-5 protein" /protein_id="EGT53228.1" /db_xref="InterPro:IPR004127" /db_xref="InterPro:IPR011599" /db_xref="PFAM:PF02996" /db_xref="WormBase:CBN10493" /db_xref="WormBase:WBGene00149218" /translation="MAEEPKGVPLSELSLQQLGELQKNCEQELTFFQESFQALKGLMT RNEKSISALEDVKVATAGHTALIPLSESLYIRAELSDPSKHMVEIGTGYFVELDREKA KAIFDRKKAHITKQVETVEGILKEKRRTRAYISDAFQTKVQAQLATMGTQQS" gene <511283..>513049 /gene="Cbn-exos-9" /locus_tag="CAEBREN_08816" /db_xref="WormBase:WBGene00147541" mRNA join(<511283..511348,511395..511489,511536..511639, 511701..511792,511841..512005,512052..512134, 512175..512307,512396..512484,512532..512835, 512882..>513049) /gene="Cbn-exos-9" /locus_tag="CAEBREN_08816" /product="CBN-EXOS-9 protein" /db_xref="WormBase:WBGene00147541" CDS join(511283..511348,511395..511489,511536..511639, 511701..511792,511841..512005,512052..512134, 512175..512307,512396..512484,512532..512835, 512882..513049) /gene="Cbn-exos-9" /locus_tag="CAEBREN_08816" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR015847 (Exoribonuclease, phosphorolytic domain 2), IPR001247 (Exoribonuclease, phosphorolytic domain 1)" /codon_start=1 /product="CBN-EXOS-9 protein" /protein_id="EGT53212.1" /db_xref="InterPro:IPR001247" /db_xref="InterPro:IPR015847" /db_xref="WormBase:CBN08816" /db_xref="WormBase:WBGene00147541" /translation="MRVQPVTICEKALILEALRSGKRFDFRGLEEFREVKLVVGAEIG TAICTIGNTKVLAAVSAQIAEPSSMRPHKGVINIDVDLSPMANYANEHDRLGSRGMEL IRLLELIIRDSRCIDVESLCIRAGKEIWKVRVDVRILDDDGSLLDCACLAAITALQHF KRPNVTLEPHHTLIYSEYEKAPVPLNIYHMPICTTIGLLDKGQMVVIDPTDKEAACLD GSIVVACNKRREVCALHQSTNLVLSTKQIERCVKLAMSRAEALTAVVSDVVKQDQRER SAFKRPDGFAITAPALILTAGTVAARKIVAPVVKNEPDVEQRAMYQPSIVLNENPLSV GSVKQEEVDNDASISEQVEMIQNSVGKVEVTETQKSSTISNRKREEKEVDDLLSGLDD DEEEVQTMTLGAEEPVQDVTMQEEEEEQPNLLLAKKKKKK" gene <515991..>518002 /gene="Cbn-mec-14" /locus_tag="CAEBREN_20127" /db_xref="WormBase:WBGene00158852" mRNA join(<515991..516083,516266..516358,516490..516601, 516647..516724,516768..516832,516880..517047, 517109..517239,517283..517517,517566..517741, 517795..>518002) /gene="Cbn-mec-14" /locus_tag="CAEBREN_20127" /product="CBN-MEC-14 protein" /db_xref="WormBase:WBGene00158852" CDS join(515991..516083,516266..516358,516490..516601, 516647..516724,516768..516832,516880..517047, 517109..517239,517283..517517,517566..517741, 517795..518002) /gene="Cbn-mec-14" /locus_tag="CAEBREN_20127" /note="contains similarity to Pfam domain PF00248; contains similarity to Interpro domain IPR001395 (Aldo/keto reductase)" /codon_start=1 /product="CBN-MEC-14 protein" /protein_id="EGT53276.1" /db_xref="InterPro:IPR001395" /db_xref="PFAM:PF00248" /db_xref="WormBase:CBN20127" /db_xref="WormBase:WBGene00158852" /translation="MQSHTFTRSRGVPIYMNGSVSHQRLYDRLSEPSTSRQLPRSISL APTGHRAGSSKREREQVDSSLPATFIPRFHDESAVRRMIYRQIPGTDIRISKIGFGAA AIGGMFGNVEDSITKIVETAIKQGINYIDTGYWYSQSRSESILGKALSKVPRKSYYIS TKVGRFELDYARTFDFRADKILESLTNSLKRLQLTYIDICYVQIHDSDFAPNESIVLY ETLQALEMAKASGKIRHIGLTGYPLGKLVQLVDCSATKIDFVMTYCKGTLNNNSLGQY TSWFQTRNIAVINSGALCWGLLTEKGPPPWHPASDEIREACLAATTYCSSKNISISKL ALDYALNFPNIVCCLVGMDSVQQVLDNLELSNFSRITDVEQRVRDRIMRRYLDRLENA GWEGVDVAQYWKKLKKLGLTALATHRHSSVESLASTLNGFSLYSSNSSSELRTPRRRR PF" gene <518631..>519117 /gene="Cbn-rps-21" /locus_tag="CAEBREN_06176" /db_xref="WormBase:WBGene00144901" mRNA join(<518631..518680,518857..518944,518989..>519117) /gene="Cbn-rps-21" /locus_tag="CAEBREN_06176" /product="CBN-RPS-21 protein" /db_xref="WormBase:WBGene00144901" CDS join(518631..518680,518857..518944,518989..519117) /gene="Cbn-rps-21" /locus_tag="CAEBREN_06176" /note="contains similarity to Interpro domains IPR001931 (Ribosomal protein S21e), IPR018279 (Ribosomal protein S21e, conserved site)" /codon_start=1 /product="CBN-RPS-21 protein" /protein_id="EGT53178.1" /db_xref="InterPro:IPR001931" /db_xref="InterPro:IPR018279" /db_xref="WormBase:CBN06176" /db_xref="WormBase:WBGene00144901" /translation="MQNDAGQTVELYVPRKCSSSNRIIGPKDHAAVQIDFVDVDPETG RMIPGKSTRYAICGAIRRMGESDDAILRLAQKDGLVPRDELKSN" gene complement(<520334..>523389) /locus_tag="CAEBREN_24533" /db_xref="WormBase:WBGene00163258" mRNA complement(join(<520334..520480,520688..520922, 520965..521218,522871..523049,523095..523165, 523218..523279,523360..>523389)) /locus_tag="CAEBREN_24533" /product="hypothetical protein" /db_xref="WormBase:CBN24533" /db_xref="WormBase:WBGene00163258" CDS complement(join(520334..520480,520688..520922, 520965..521218,522871..523049,523095..523165, 523218..523279,523360..523389)) /locus_tag="CAEBREN_24533" /note="contains similarity to Interpro domain IPR007590 (CWC16 protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53208.1" /db_xref="InterPro:IPR007590" /db_xref="WormBase:CBN24533" /db_xref="WormBase:WBGene00163258" /translation="MTGTERKVFQKYYPPDFDPSKIPRAKGQRNRQFVQRVMTPFNMQ CNTCHEYIYKGKKFNMKRETAEGESYLGLKIFRFYFRCPNCLAEITFKTDLENCDYQN EHGATRLFEAVKLYQDQQKQADEQEAEDAKDPMKMLEKRTMQSRQEMEEMGNLEDLQE SSRTKECVDTIGFLSATDPHLAQAQRIKMMEEEDDRMARELMGITSEGRIERRIKDYE DDGDDQSDDDKDLPGPSSSTAITLKPAIPKLGTDDNTNNRKRNEQKDRFAGIKLIKKA KPSETADTPLTSSTSSSTSSAPVPSVVTPVPGPSGLSLLAGYGSDSDSD" gene complement(<523921..>525103) /gene="Cbn-epg-4" /locus_tag="CAEBREN_12023" /db_xref="WormBase:WBGene00150748" mRNA complement(join(<523921..524073,524119..524308, 524353..524496,524544..524783,524834..524988, 525035..>525103)) /gene="Cbn-epg-4" /locus_tag="CAEBREN_12023" /product="CBN-EPG-4 protein" /db_xref="WormBase:WBGene00150748" CDS complement(join(523921..524073,524119..524308, 524353..524496,524544..524783,524834..524988, 525035..525103)) /gene="Cbn-epg-4" /locus_tag="CAEBREN_12023" /note="contains similarity to Pfam domain PF07264; contains similarity to Interpro domain IPR009890 (Etoposide-induced 2.4)" /codon_start=1 /product="CBN-EPG-4 protein" /protein_id="EGT53318.1" /db_xref="InterPro:IPR009890" /db_xref="PFAM:PF07264" /db_xref="WormBase:CBN12023" /db_xref="WormBase:WBGene00150748" /translation="MGVVRVIVTDFLHGVSDSLTGILFIRRLLEEDAKEPVVEPPKRR EKTVLELRREQKGIFRRPPAPPKKKDSFAKKLSQIYGMNLLFLVVWQIFIRILAFVFG FFDRAELGYTIGSFLCWPIFLASRIIQALWFSDISGACMRALNQEPQIHESMGKMLNE MLLSLVHQTFFLFQGILSQHLPIPLITPIIVFIHMALLNSMYCFDYFFDSYNFFLNRR RYYFETKWPYFIGFGTPLALACSMVNDTFINSVIFALLFPLFIISSYKANWARKYDEP VPYIAHCRIAAMFTKLTADGFKKLTTLTPPAPIKVEQKSS" gene complement(<525949..>527346) /locus_tag="CAEBREN_03698" /db_xref="WormBase:WBGene00142423" mRNA complement(join(<525949..526074,526941..527060, 527107..527167,527216..>527346)) /locus_tag="CAEBREN_03698" /product="hypothetical protein" /db_xref="WormBase:CBN03698" /db_xref="WormBase:WBGene00142423" CDS complement(join(525949..526074,526941..527060, 527107..527167,527216..527346)) /locus_tag="CAEBREN_03698" /note="contains similarity to Pfam domain PF00550; contains similarity to Interpro domains IPR006163 (Phosphopantetheine-binding), IPR006162 (Phosphopantetheine attachment site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53316.1" /db_xref="InterPro:IPR006162" /db_xref="InterPro:IPR006163" /db_xref="PFAM:PF00550" /db_xref="WormBase:CBN03698" /db_xref="WormBase:WBGene00142423" /translation="MFCRQLGRFAFRTVSASVQQRCASSAVPQLMKLAAPSVNFTQIR GSKIEVFGPFDPPKQLTFKQVEERVLKAVRSWDRFPADKESLLKLDADLNKDFGFDSL DQVEIVMALEDEFGFEIPLQDSDKFKTIRDAFKYICEREDVYE" gene complement(<527478..>527847) /gene="Cbn-rpl-36" /locus_tag="CAEBREN_03267" /db_xref="WormBase:WBGene00141992" mRNA complement(join(<527478..527672,527728..>527847)) /gene="Cbn-rpl-36" /locus_tag="CAEBREN_03267" /product="CBN-RPL-36 protein" /db_xref="WormBase:WBGene00141992" CDS complement(join(527478..527672,527728..527847)) /gene="Cbn-rpl-36" /locus_tag="CAEBREN_03267" /note="contains similarity to Pfam domain PF01158; contains similarity to Interpro domain IPR000509 (Ribosomal protein L36e)" /codon_start=1 /product="CBN-RPL-36 protein" /protein_id="EGT53191.1" /db_xref="InterPro:IPR000509" /db_xref="PFAM:PF01158" /db_xref="WormBase:CBN03267" /db_xref="WormBase:WBGene00141992" /translation="MSGPAIEGLAVGLNKGHAATQLPVKQRQNRHKGVASKKTKIVRE LVREITGFAPYERRVLEMLRISKDKRALKFLKRRIGTHRRAKAKREELQNVIIAQRKA HK" gene <528401..>528951 /gene="Cbn-rps-14" /locus_tag="CAEBREN_08213" /db_xref="WormBase:WBGene00146938" mRNA join(<528401..528548,528592..528707,528757..>528951) /gene="Cbn-rps-14" /locus_tag="CAEBREN_08213" /product="CBN-RPS-14 protein" /db_xref="WormBase:WBGene00146938" CDS join(528401..528548,528592..528707,528757..528951) /gene="Cbn-rps-14" /locus_tag="CAEBREN_08213" /note="contains similarity to Pfam domain PF00411; contains similarity to Interpro domains IPR018102 (Ribosomal S11, conserved site), IPR001971 (Ribosomal protein S11)" /codon_start=1 /product="CBN-RPS-14 protein" /protein_id="EGT53274.1" /db_xref="InterPro:IPR001971" /db_xref="InterPro:IPR018102" /db_xref="PFAM:PF00411" /db_xref="WormBase:CBN08213" /db_xref="WormBase:WBGene00146938" /translation="MAPARKGKAKEEQAVVSLGPQAKEGELIFGVAHIFASFNDTFVH ITDISGRETIVRVTGGMKVKADRDESSPYAAMLAAQDVADRCKQLGINALHIKLRATG GTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPSDCTRRKGGRRGRRL" gene <529487..>530895 /locus_tag="CAEBREN_01992" /db_xref="WormBase:WBGene00140717" mRNA join(<529487..529678,529720..529782,529830..530048, 530707..>530895) /locus_tag="CAEBREN_01992" /product="hypothetical protein" /db_xref="WormBase:CBN01992" /db_xref="WormBase:WBGene00140717" CDS join(529487..529678,529720..529782,529830..530048, 530707..530895) /locus_tag="CAEBREN_01992" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019408 (7TM GPCR, serpentine chemoreceptor, Srab), IPR002184 (7TM GPCR, serpentine receptor class b (Srb), Nematode)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53225.1" /db_xref="InterPro:IPR002184" /db_xref="InterPro:IPR019408" /db_xref="WormBase:CBN01992" /db_xref="WormBase:WBGene00140717" /translation="MYHGLLTIQHCGDTGLLQAHALTFHPVYRVSQFYQFTILVLAVC PLIHFMFFKVLKSNFHGNLKWLLAGYFGTISLFTFLFLGLASIQVMIPFLALNKCDLL IHKDYYKLGNFLGCFLMTAPTFFPISITFERFLATKKAKDYEKSSVILGPIVTVLVMI PTYNFVIGVAAIYFYRNVQKEKQTNIIGNIRMESTGNAGAQNYENAISTIWNSVAVTP IS" gene complement(<531083..>531979) /locus_tag="CAEBREN_13703" /db_xref="WormBase:WBGene00152428" mRNA complement(join(<531083..531280,531333..531668, 531715..531816,531860..>531979)) /locus_tag="CAEBREN_13703" /product="hypothetical protein" /db_xref="WormBase:CBN13703" /db_xref="WormBase:WBGene00152428" CDS complement(join(531083..531280,531333..531668, 531715..531816,531860..531979)) /locus_tag="CAEBREN_13703" /note="contains similarity to Pfam domain PF02117; contains similarity to Interpro domains IPR002184 (7TM GPCR, serpentine receptor class b (Srb), Nematode), IPR000344 (7TM GPCR, serpentine receptor class a (Sra), Nematode)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53158.1" /db_xref="InterPro:IPR000344" /db_xref="InterPro:IPR002184" /db_xref="PFAM:PF02117" /db_xref="WormBase:CBN13703" /db_xref="WormBase:WBGene00152428" /translation="MTLSTVFPITVTIERFVAMKKAKSYEKMKVILGPALVLIVILID FSIIFYIYKDENFGTGSISFMIFPSSDAAPMFGLFFIILRLNILNFLFNLFLFRQNSH LKRYALTVPVTFTNTFYCRKNFTLATKYQLEEVYLSTKLVVSIIFSHAIFFAFYLFTM NLSGLIGKKLIEDPINLWALNGVLMSLIATYNLVIGILSIHLYNRIRAKKTIDINGKV QMKSTGNAGALNYDNAIFSIWNSASSLSSRKTI" assembly_gap 533344..533353 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <534206..>534845 /locus_tag="CAEBREN_16434" /db_xref="WormBase:WBGene00155159" mRNA join(<534206..534251,534301..534477,534518..534628, 534679..>534845) /locus_tag="CAEBREN_16434" /product="hypothetical protein" /db_xref="WormBase:CBN16434" /db_xref="WormBase:WBGene00155159" CDS join(534206..534251,534301..534477,534518..534628, 534679..534845) /locus_tag="CAEBREN_16434" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53235.1" /db_xref="WormBase:CBN16434" /db_xref="WormBase:WBGene00155159" /translation="MFVGCVYETEVWNVGESAATPLELTTANMTIALNNAEETYVVGE NENVEKKNRKEKKCIQTEPRHVSIIEVGIDDMACIYKNETHPYKSSWIDEEINAELYC SDANRVVKTNCVIRGHYYSTSVYDKYRLSNGCTFICNEQKNIFKCPNLLPSLKTVEAV GRKASE" gene <535515..>536938 /locus_tag="CAEBREN_07520" /db_xref="WormBase:WBGene00146245" mRNA join(<535515..535710,536264..536311,536358..536477, 536636..536746,536796..>536938) /locus_tag="CAEBREN_07520" /product="hypothetical protein" /db_xref="WormBase:CBN07520" /db_xref="WormBase:WBGene00146245" CDS join(535515..535710,536264..536311,536358..536477, 536636..536746,536796..536938) /locus_tag="CAEBREN_07520" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53250.1" /db_xref="WormBase:CBN07520" /db_xref="WormBase:WBGene00146245" /translation="MANRIVFIVLIISDCFLIANGYYPSDFNSPFVFEEKVYINHDNK NFVSSTTIRDEVTGSLTTEYRGCENDDYSDEVYKTLIKYDRYIKLNSFLNYHPDDKEI TKCVETEPGHVALIAADRKETDCVYAGVSHPYTTSWSDKSKAARFSCSEGNIVFKSYC EIEDEWININSEHKLSNGCTFICDSKKNIYKCDNQLPNMQVMKSK" gene <537537..>538477 /gene="Cbn-col-176" /locus_tag="CAEBREN_02358" /db_xref="WormBase:WBGene00141083" mRNA join(<537537..537888,537939..>538477) /gene="Cbn-col-176" /locus_tag="CAEBREN_02358" /product="CBN-COL-176 protein" /db_xref="WormBase:WBGene00141083" CDS join(537537..537888,537939..538477) /gene="Cbn-col-176" /locus_tag="CAEBREN_02358" /note="contains similarity to Pfam domain PF01484; contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal)" /codon_start=1 /product="CBN-COL-176 protein" /protein_id="EGT53177.1" /db_xref="InterPro:IPR002486" /db_xref="PFAM:PF01484" /db_xref="WormBase:CBN02358" /db_xref="WormBase:WBGene00141083" /translation="MFEEKLLVTVATALSGLAIVACLVVVPSLYNTIDEIHNEVLDSV RVFRVETDSAWTEMMDVQVLVTPPTKPRVNPFNSVFRQKRQTFSGLPAWCQCEPKKPT CPPGPPGPPGPPGQPGTPGAPGPKGPDSTTTYAPIECHQPNPGCVKCPPGPAGPSGPA GPAGPKGSDGRPGQPGNAGKPGAPGGPGPKGDNGAPGAAGGPGKPGAPGKDGQRGKGA AGAPGAPGKAGPAGPAGGPGKNGSDGTPGPAGPAGGPGQPGNKGSDGHPGTPGAPGGP GHDAAYCACPPRSAVFVSRH" gene complement(<538695..>539543) /locus_tag="CAEBREN_09937" /db_xref="WormBase:WBGene00148662" mRNA complement(join(<538695..539257,539313..539441, 539486..>539543)) /locus_tag="CAEBREN_09937" /product="hypothetical protein" /db_xref="WormBase:CBN09937" /db_xref="WormBase:WBGene00148662" CDS complement(join(538695..539257,539313..539441, 539486..539543)) /locus_tag="CAEBREN_09937" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53184.1" /db_xref="WormBase:CBN09937" /db_xref="WormBase:WBGene00148662" /translation="MSSLRLQQLERECLKNEIPGSCEKGYSKLASECGNGTGGRERNC QMIVETARKQLCRKKRMKRTSLCRVKRQAGYDTNPRVTQRPYHPQFTPQPPLTKEPTP PPPQPQPNPAPQPEPPAPAQQPPQPPAPTPEPEKSSLFSGSLLIGFFICGIFVCIGIS AVVGYLYYTKRQEKEREEERRRMEQSRQMDKKRRKKMRKKKSKRIIVQKTGEETRVER REAKEKDREEEVQKWKDFDEANRKPNTFLDP" gene <541299..>541814 /locus_tag="CAEBREN_00723" /db_xref="WormBase:WBGene00139448" mRNA join(<541299..541397,541492..541650,541695..>541814) /locus_tag="CAEBREN_00723" /product="hypothetical protein" /db_xref="WormBase:CBN00723" /db_xref="WormBase:WBGene00139448" CDS join(541299..541397,541492..541650,541695..541814) /locus_tag="CAEBREN_00723" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53205.1" /db_xref="WormBase:CBN00723" /db_xref="WormBase:WBGene00139448" /translation="MLQLSSNYSIIFYSFLFCFTRIIVIYCGETHEQVCKKIFSIFVP FTFIFPFFADFYMIPSQGGCKRLKPPFSPNAISLSFGETLFNIRTDNIMLGLSFIAPV AILVVNSVLVFKVRQILFQRKYT" gene complement(<544109..>547062) /locus_tag="CAEBREN_03475" /db_xref="WormBase:WBGene00142200" mRNA complement(join(<544109..544309,544355..544491, 544542..544791,544838..545330,545483..545919, 545972..546342,546398..546727,546774..546987, 547036..>547062)) /locus_tag="CAEBREN_03475" /product="hypothetical protein" /db_xref="WormBase:CBN03475" /db_xref="WormBase:WBGene00142200" CDS complement(join(544109..544309,544355..544491, 544542..544791,544838..545330,545483..545919, 545972..546342,546398..546727,546774..546987, 547036..547062)) /locus_tag="CAEBREN_03475" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53258.1" /db_xref="WormBase:CBN03475" /db_xref="WormBase:WBGene00142200" /translation="MRKQNRPNQTARKQMQNLTVELFARDKNARRQLLDEALAVSPTT ASEPAPPTTSTEQPAAISPTSEPIQELVQVLLAPEPMGPSQRKPRSPMKLIHPKPNSF PKKPTELKPMKSDEPKSVESTENVPSQESEPIKGDHVETAVSENSSVSVDVPVSVDTI NEKDSLKGKEEEVEAIEKEVASPITESPILGSASSVVDSTPVPTVPVENPVPYVTPPP LQRVPYDAPPCRLANIRAVTESMNIAAIPSQPHHAHPSEPMSFAACVRKQPSIESMSI SPSPYAKFDGKTSPFNNGANPFNNQGGFGGFSRDPNKNSNPFANRKRFNEYDSSSSSN SHFHSNRFYPERSSDQNRDPSENTGGFAAHNQRPNGFMTRSIPRESASSGMLPNWYKG RSFSTASSHYPFSQRSNSSGHYSSFSKPSHSTSLNIPSHGHVEDLDGFLASSTQSNPF FTKRSDLNMKKERWARMKAKKRLLRRPIEDEFYEDPDAEEEILRGNGVMLNHIVQQST CGNYEDADLLRKYRRDVAYVKERVLTTIDGNIDGIRDLRFLLASVQTYGNIDGECMMA EIALNEFSLFSGIIEKFHAIVGPWQTDNESQRRRASRHAFETHRIPLQHAIATISKKK LVEEILGRVEPSIACHQGVKVGLYSDSCNEKTRIELNIKNNFKDPGMICDKNDRRFVL VLQSELDLMVESLKHLAKTVGFHYDGFPVHHNNFVIVEAFVEAISDIMNEKVDMETMR WFSLLGQKIDAEDSVSPWETGTDFHCSRHSEPKSNFCAAVTVGRTCCIIYHVLGGFFR RYHLKKIPTAHHIPSTSTSNQ" gene complement(<550500..>552272) /locus_tag="CAEBREN_30332" /db_xref="WormBase:WBGene00192297" mRNA complement(join(<550500..550793,550838..550954, 551343..551392,551437..551578,552207..>552272)) /locus_tag="CAEBREN_30332" /product="hypothetical protein" /db_xref="WormBase:CBN30332" /db_xref="WormBase:WBGene00192297" CDS complement(join(550500..550793,550838..550954, 551343..551392,551437..551578,552207..552272)) /locus_tag="CAEBREN_30332" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53303.1" /db_xref="WormBase:CBN30332" /db_xref="WormBase:WBGene00192297" /translation="MNFGLTFHKIWQKLHCWSRHLKTRRAYCAISLLNYSADLILISW MFSKQPIFLDILFCISSALIGISITGLYLKRPSVMLPDVLYKVIVSACALFNAILDAD NGTSGAAPRLLMVFIALLSHIYENYFLFNAIAAFYREQEGIENRRPPPSYNLFAKSIP KPSSTIPSPSKCTTENDVENGASTSDNPNNERCSTPPPTYEFAMEKMKEMKEKEEKSM EEIV" gene complement(<553025..>555512) /locus_tag="CAEBREN_20674" /db_xref="WormBase:WBGene00159399" mRNA complement(join(<553025..553191,553239..554196, 554241..555020,555078..555167,555215..555361, 555459..>555512)) /locus_tag="CAEBREN_20674" /product="hypothetical protein" /db_xref="WormBase:CBN20674" /db_xref="WormBase:WBGene00159399" CDS complement(join(553025..553191,553239..554196, 554241..555020,555078..555167,555215..555361, 555459..555512)) /locus_tag="CAEBREN_20674" /note="contains similarity to Pfam domain PF00501; contains similarity to Interpro domains IPR020845 (AMP-binding, conserved site), IPR000873 (AMP-dependent synthetase/ligase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53229.1" /db_xref="InterPro:IPR000873" /db_xref="InterPro:IPR020845" /db_xref="PFAM:PF00501" /db_xref="WormBase:CBN20674" /db_xref="WormBase:WBGene00159399" /translation="MKRKVSVYDSSKDKTLGQVVKGESPIWIRVAMAVLRVWFFIYDC LNYLPYQLFNSPTEKLRKSERVKANWVEDRDGPIRNVQGHASETFPGKDTIDKVWRKC VELYDESPCLGTRQLIEVHEDQQPGGRVFEKWHLGEYTWQSYKEVETQVARMAAGIKD LAGEESNPKVVIFAETRADWLITALACFRANVTIVTVYATLGEDAIAHAIGETEATIL ITSSELLPKIVTLGKKCPTLKTLIYFSPVNAKGPAPDLTPFREQFKHVLSLNGLLTRN EELVKESTAIKTDIALIMYTSGTTGQPKGVILLHQNVVAALLGQGDGVGIICNADTYI GYLPLAHILELDAELTCLTKGAKVGYSSPLTLHDRASKIQKGTHGDCHALRPTLMAAV PAIMDRIFKAVSEEVAASPRFMQELFKLNYERKRSRYLEGYCSPFLDRIVFKKIRRLL GGKLRGVLSGGAPLNAETQRFMNICMCCPVVQGYGLTETCGAACVADINDLSTGTVGP PVRCSDIALREWPEGGYSPFNDPPQGEILISGENISPGYWKQPEKTAEDFITYKGKVY FATGDIGQKRDDGSLLIIDRKKDLVKLQHGEYVSLAKVECALLNCPIVDNICVYGSSM EDSVVALVVPNQKHLEKIAESEGVSTSEMKAMCEDKKVVAAYKKQLEEHSKKSKLSRT EIPAAIHLCPDIWTPDSGLLTEALKLKRKPIQTAYQKTLDDLYKQLRKN" gene complement(<558192..>560401) /locus_tag="CAEBREN_07129" /db_xref="WormBase:WBGene00145854" mRNA complement(join(<558192..558419,558469..558611, 558687..558972,559021..559317,559437..559755, 559802..560032,560076..560191,560309..>560401)) /locus_tag="CAEBREN_07129" /product="hypothetical protein" /db_xref="WormBase:CBN07129" /db_xref="WormBase:WBGene00145854" CDS complement(join(558192..558419,558469..558611, 558687..558972,559021..559317,559437..559755, 559802..560032,560076..560191,560309..560401)) /locus_tag="CAEBREN_07129" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53214.1" /db_xref="WormBase:CBN07129" /db_xref="WormBase:WBGene00145854" /translation="MMLNDGEIVDDNMVVAEYEEIAVVDDINDMSELVVENDDDDSMQ YDDVHDVNDYGGMPIDQYNDIVAYKKTNTIPDSILNRHDRSAPSHWRARCKCFSMADD NETLLYYNPENAVNAVPKVVVKKGEVRKVLERVHELIGHLGQKRTQMVVLRKLYWRSV RQDVKTFIASCVFCTEKKLQGRKITKAPVDITSENFDITVSVRDVASGSSDRLEFQLM GYNEDEVREASYTRMTSYTFKETANQYRSRYSSQGTPLFRRQPYVKKHNNQSIGYLVP FHQRSRTSEPEFLELYGRDEYQHHSDMMYETVPEIDDGMMRSREDDKRKVEHLSDAQP VKYFGEELSNKNFKTEQEPDMEGSPSQAGPSSSSSSLPESPQKQQQRYLQKRLLDMNS DRERSSMRDCHSSERQTSPTPTTTASLVKKRRRELPSIRGMANRFSIAIGESDRIDNA EVNRSNPHLIEYPEPTSLMSGDSLGLPPVIMAPATNDEVCKLQIEALQRHIHLQKLQE KILNNQYDASMRIPITRYMQSEDVQEEQLEEEHVLDVIDNHHQVYEEADDVPQSQHRH IRHQ" gene <560975..>561776 /locus_tag="CAEBREN_23476" /db_xref="WormBase:WBGene00162201" mRNA join(<560975..561103,561153..561504,561553..>561776) /locus_tag="CAEBREN_23476" /product="hypothetical protein" /db_xref="WormBase:CBN23476" /db_xref="WormBase:WBGene00162201" CDS join(560975..561103,561153..561504,561553..561776) /locus_tag="CAEBREN_23476" /note="contains similarity to Pfam domain PF08231; contains similarity to Interpro domain IPR013260 (mRNA splicing factor SYF2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53200.1" /db_xref="InterPro:IPR013260" /db_xref="PFAM:PF08231" /db_xref="WormBase:CBN23476" /db_xref="WormBase:WBGene00162201" /translation="MSSQSQEGSSGTSSSGSKMKDFNQRFRDLHKLRQKARKENHEQV VEEDRRSKLPKNHEAKKERDQWQVKELQDRKEAEDKGLNYERVRNLEMSADVTEKLEQ KRKRKKNPDQGFASYEDMTLRQHTRLTAALDPDLDSYKKMKECVGGEQFYPTADTLIH GNHYPTTSAMDRLVKDVHGQVKRREQYHRRRLYDPDAPIDYINEKNKKFNKKLDKYYG KYTEDIKDDLERGTAI" gene <561900..>563816 /gene="Cbn-rnp-7" /locus_tag="CAEBREN_17654" /db_xref="WormBase:WBGene00156379" mRNA join(<561900..562049,562094..562276,562322..562384, 562434..562512,563238..563339,563382..563613, 563663..>563816) /gene="Cbn-rnp-7" /locus_tag="CAEBREN_17654" /product="CBN-RNP-7 protein" /db_xref="WormBase:WBGene00156379" CDS join(561900..562049,562094..562276,562322..562384, 562434..562512,563238..563339,563382..563613, 563663..563816) /gene="Cbn-rnp-7" /locus_tag="CAEBREN_17654" /note="contains similarity to Pfam domain PF00076; contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1)" /codon_start=1 /product="CBN-RNP-7 protein" /protein_id="EGT53257.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="WormBase:CBN17654" /db_xref="WormBase:WBGene00156379" /translation="MTAFLPPNLLALFEARPPIQYLPPVEDLLVDKNAKRAPMTGVAQ YINLFEDPKDTPAKIPVVTKAQAKEEKRRQKEELLAYKVEQGIATWNPAENPRASEDP YRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTA YKKADGIKVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTRKTRESKAVIEEKEMQSGF GGGYEDRERERSGSRDRRQDSYRNGGGNDRDRRESSGGFRDSRGSSGGYGGGSRDRYG DRNGGYGGDRGGDRGNSRFGSGGGGSGGGFRSGGGGGGRYGDRR" gene <564140..>565750 /gene="Cbn-nuo-4" /locus_tag="CAEBREN_01344" /db_xref="WormBase:WBGene00140069" mRNA join(<564140..564496,564549..564777,564826..564950, 564996..565139,565217..565302,565371..565592, 565639..>565750) /gene="Cbn-nuo-4" /locus_tag="CAEBREN_01344" /product="CBN-NUO-4 protein" /db_xref="WormBase:WBGene00140069" CDS join(564140..564496,564549..564777,564826..564950, 564996..565139,565217..565302,565371..565592, 565639..565750) /gene="Cbn-nuo-4" /locus_tag="CAEBREN_01344" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR005829 (Sugar transporter, conserved site), IPR003442 (Uncharacterised protein family UPF0079, ATPase bacteria), IPR002624 (Deoxynucleoside kinase)" /codon_start=1 /product="CBN-NUO-4 protein" /protein_id="EGT53223.1" /db_xref="InterPro:IPR002624" /db_xref="InterPro:IPR003442" /db_xref="InterPro:IPR005829" /db_xref="PFAM:UPF0079" /db_xref="WormBase:CBN01344" /db_xref="WormBase:WBGene00140069" /translation="MSKLGGLATGLLACSRTGLSNQVRGVVHKSLLRLPSEHPEPWDY KHKGFNYIDGLKDNTQAHLHQNSKLIVIEGNIGSGKTTLAKQLADQLGFVHFPEFRMD DILIDRYGNDLRNYYSKFPARYRLPDISMFYKNPRGELSAAMQDRIFNCRFDQYLNAL AHILNTGQGVVLERTPHSDFVFANAMRDKNYIGHEYFKHYYFVRKNALPQLHFWPHLV VYLNTPTSKCLENIKRRGNTEEIAVVDERYLKTIEESYKDSLREYRNHSKILAYDWTK PGDTDAVVEDIERLDLDFFEWHSGDVMEEWNTIVDSVGVTNKYDARMLAFDGVPKHEV GELYTNPRDTGHFLHVMRKEVLKSPFGYGYIAKNGDHQAGTTAWHTGHHLPEPWYEYY FREAYYDDLTSHETSLDLDSDSYDPDYVHHHH" gene <569199..>574943 /gene="Cbn-ogt-1" /locus_tag="CAEBREN_19522" /db_xref="WormBase:WBGene00158247" mRNA join(<569199..569234,569480..569704,570352..570514, 570561..570714,570760..571072,571164..571360, 571411..571500,571778..571922,572432..573562, 573609..573857,574038..574424,574474..574715, 574760..>574943) /gene="Cbn-ogt-1" /locus_tag="CAEBREN_19522" /product="CBN-OGT-1 protein" /db_xref="WormBase:WBGene00158247" CDS join(569199..569234,569480..569704,570352..570514, 570561..570714,570760..571072,571164..571360, 571411..571500,571778..571922,572432..573562, 573609..573857,574038..574424,574474..574715, 574760..574943) /gene="Cbn-ogt-1" /locus_tag="CAEBREN_19522" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR011990 (Tetratricopeptide-like helical), IPR008940 (Protein prenyltransferase), IPR001440 (Tetratricopeptide TPR-1), IPR013105 (Tetratricopeptide TPR2), IPR019734 (Tetratricopeptide repeat)" /codon_start=1 /product="CBN-OGT-1 protein" /protein_id="EGT53159.1" /db_xref="InterPro:IPR001440" /db_xref="InterPro:IPR008940" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR013105" /db_xref="InterPro:IPR019734" /db_xref="WormBase:CBN19522" /db_xref="WormBase:WBGene00158247" /translation="MEKPSYFQSYNKVIGATGEQLAPGAVPAHPVLAPTIAATPLAIT PSPLGAAATPIAPIGLPGVSAASMANIMQTPGFASLVQQAIQKQLENQAVAQLAASQQ VFQLNGNAANALLLAQQPIAPIVVPPQPTVVLNGVNETMKKVTELAHRQFQAGNYAEA EKYCNLVFQTDQQNLPTLLLLSAINFQTKNLEKSMHYSLMAIKVNPNCAEAYSNLGNY YKEKGHLAEALEHYRTAVKLKPEFIDAYINLAAALVSGGDLEQAVNAYFNALAINPDL YCVRSDLGNLLKAMGKLEEAKVCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHF EKAVTLDPNFLDAYINLGNVLKEARIFDRAVSAYLRALNLHGNHAVVHGNLACVYYEQ GLIDLAIDTYKKAIELQPIFPDAYCNLANALKEKGCIQEAEEAYLKALELCPTHADSQ NNLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLSEAILHYKEAI RIAPTFADAYSNMGNTLKEMGDSNAAIACYNRAIQINPAFADAHSNLASIHKDAGNMA EAIQSYNTALKLKPDFPDAFCNLAHCLQIICDWTGYDKRIRKLVQIVEEQLTKKRLPS VHPHHSMLYPLSHATRIAIAAKHASLCFDKVHVQMLGKTPLIHADRFSVQNGQRLRIG YVSSDFGNHPTSHLMQSIPGMHNRDRVEVFCYALSVNDGTNFRSKLMAESEHFFDLST IPCNGKAAEKIAQDGIHILINMNGYTKGARNEIFALRPAPIQVMWLGYPSTSGATFMD YIITDAVTTPLQLACAFTEKLAYMPHTFFIGDHAQMLRHLTEKVVVKDKEEGTERDSC LIMNTANMDPILAKSEIKEQVLDTEVVSGPKKELVRAEVVLPVLEVPTEPIKQMIMTG QMTMNVMEDMNVQNGLGQSQMHHKAATGEEIPNSVLLTSRAQYQLPDDAIVFCNFNQL YKIDPATLDMWIKILENVPKSILWLLRFPYQGEEHIRKYCVERGIEQSRIVFSNVAAK EEHVRRGQLADVCLDTPLCNGHTTGMDILWTGTPMVTMPLDSLASRVATSQLYALGVP ELVAKTRQEYIRIATRLGNDADHLASMRAKVWMARTTSTLFNVKQYCHDMEDLLEQMW KRYECGLPVDHITNNTETPIGLCPP" assembly_gap 576197..581730 /estimated_length=5534 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <581736..>585025 /locus_tag="CAEBREN_28713" /db_xref="WormBase:WBGene00190678" mRNA join(<581736..581835,581874..582135,582181..582432, 582479..582634,582679..582946,582992..583200, 583293..583680,583730..583890,583935..584032, 584077..584177,584225..584319,584398..>585025) /locus_tag="CAEBREN_28713" /product="hypothetical protein" /db_xref="WormBase:CBN28713" /db_xref="WormBase:WBGene00190678" CDS join(581736..581835,581874..582135,582181..582432, 582479..582634,582679..582946,582992..583200, 583293..583680,583730..583890,583935..584032, 584077..584177,584225..584319,584398..585025) /locus_tag="CAEBREN_28713" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019594 (Glutamate receptor, L-glutamate/glycine-binding), IPR001638 (Extracellular solute-binding protein, family 3), IPR015683 (Glutamate receptor-related), IPR001320 (Ionotropic glutamate receptor), IPR001828 (Extracellular ligand-binding receptor), IPR001508 (NMDA receptor)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53286.1" /db_xref="InterPro:IPR001320" /db_xref="InterPro:IPR001508" /db_xref="InterPro:IPR001638" /db_xref="InterPro:IPR001828" /db_xref="InterPro:IPR015683" /db_xref="InterPro:IPR019594" /db_xref="WormBase:CBN28713" /db_xref="WormBase:WBGene00190678" /translation="MIFSVAPSAEQLLVDYIQYKGWRDVVYIHDGKNVPADRTLRNMF SYLHKKSPKYQLFVDNYVVSYFKFRSLKRKTESMRIVFQAPSDEEMFKEFLNEFHRRI STQHSLKSNDSSEEIDEPIPVNVIVDLEGSYRTRAFLRALEESVLVKKEYHYVFSNFV SFFRENGHSLLHLQDVDESDLSGFHFSLINITIFRIFDKNNKKFLKTRAEFHDVYRGG FSNTDSIPTAAAFAHDAILVAGKALQIAMDENGKGIFDKSFVRHQLFNRGKKGLYCRP HEDQTETRQFETFEHGLKIAEAIKKVVLTEQDGTLTGRIQFDKITGRRTNFSAEIIEI KPGVNSLNSIWERFQWAQDEGFLLGGERYVQEKKKDSSQSRKGILPSKPWKLRFNVVT VLVKPFVMLRRRNPGEPELKGNDRFEGYCIDLLNLLAKNITGFEYDVFISDGNKYGSR QADGSWDGMIGYLLNEVSALSEHSTHFKFQTADVAVAPLTITQERERAVDFSKPFMTT GISIMIKKPEKQEFNIFSFMEPLGMTIWIFTLSSYFGVSLTIFLVSWFSPYEKRIEFK RGEFTVTNEFTLYNSLWFTLAAFMQQGTDILPRAVSGRIASSCWWFFTLIIVSSYTAN LAAFLTLERMTPPIESVDDLANQNKILYGVVEGGSTAAFFEDSIVPLYKKMWNFMVST TQKQMELERQSISNSTSNRIFVSSYADGIEKVRTSKGKYAFLLEETTNNYESGRRPCD TMKVGQNLNTLGYGIATKIGNPLRFFLGVIRFEIFPIYRVSLNLAILYLSEKGELKKL ENKWWYDRGQCDTGTSDGGTSSSLNLSKVAGIFYILLAGMVLSMCTALIEFLFRKNKE NREKERNRMRNSRQQKPGIMASCERAKQKQHQNRRTKSEEVTTPRSTLF" gene <585395..>586396 /locus_tag="CAEBREN_11675" /db_xref="WormBase:WBGene00150400" mRNA join(<585395..585450,585495..585579,585641..585981, 586025..586122,586164..>586396) /locus_tag="CAEBREN_11675" /product="hypothetical protein" /db_xref="WormBase:CBN11675" /db_xref="WormBase:WBGene00150400" CDS join(585395..585450,585495..585579,585641..585981, 586025..586122,586164..586396) /locus_tag="CAEBREN_11675" /note="contains similarity to Pfam domain PF00013; contains similarity to Interpro domains IPR018111 (K Homology, type 1, subgroup), IPR004087 (K Homology)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53188.1" /db_xref="InterPro:IPR004087" /db_xref="InterPro:IPR018111" /db_xref="PFAM:PF00013" /db_xref="WormBase:CBN11675" /db_xref="WormBase:WBGene00150400" /translation="MLEREISNLDSPTNRQNGSYLNELMKELQAMTNIYESNHCVKFR NAQNLLIREIQRVLDAEVLVNSFGTPQSGMRRAMAGRETEVSPVELSSIGNILKDETL FMTPSGPSTLKRRQIFSPLTLSLIGSGNLNKTEKNSEELEREGKFQKSDKLFFPPETA ENVNPIGRLIGPRGITIRQLERDLGCKLHIRGKGCTRDDAKEERLRGRPGWEHLEEPI HVLITVYGDSEEKTTEKLSSIKNLLQDFLENNDSDLKRSQLMQLAVIEGTLK" gene complement(<586475..>587649) /locus_tag="CAEBREN_23595" /db_xref="WormBase:WBGene00162320" mRNA complement(join(<586475..586477,586525..586688, 586744..587019,587081..587428,587479..587599, 587647..>587649)) /locus_tag="CAEBREN_23595" /product="hypothetical protein" /db_xref="WormBase:CBN23595" /db_xref="WormBase:WBGene00162320" CDS complement(join(586475..586477,586525..586688, 586744..587019,587081..587428,587479..587599, 587647..587649)) /locus_tag="CAEBREN_23595" /note="contains similarity to Pfam domain PF00432; contains similarity to Interpro domain IPR001330 (Prenyltransferase/squalene oxidase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53297.1" /db_xref="InterPro:IPR001330" /db_xref="PFAM:PF00432" /db_xref="WormBase:CBN23595" /db_xref="WormBase:WBGene00162320" /translation="MSFAGLLDFARKDVELPQNSPKQLLRDLHSSFIQKYEKDKNTLH NGRAYPGQWNLLVCKCDGFDGRGIESSSKLNANNTFQLDKMSAEDIVDYVLSCRNVDG GYGPAPGHDSHLLHTLCAVQTLIIFDALQKADADSICEYVKGLQNKDGSFCGEISGEI DTRFTMCALATCHLLGRLSTVNIDSAMKFLLRCYNTDGGFGTRPGSESHSGQIYCCVG ALAIVGRLDDIDRDRTAEWLAFRQCDSGGLNGRPEKLPDVCYSWWVLASLAILGRLNF IDQESMKNFIYACQDDETGGFADRPGDC" gene complement(<589091..>591356) /locus_tag="CAEBREN_06344" /db_xref="WormBase:WBGene00145069" mRNA complement(join(<589091..589291,589337..589842, 589886..590312,590363..590506,590553..590764, 590810..590946,590992..591083,591136..591228, 591276..>591356)) /locus_tag="CAEBREN_06344" /product="hypothetical protein" /db_xref="WormBase:CBN06344" /db_xref="WormBase:WBGene00145069" CDS complement(join(589091..589291,589337..589842, 589886..590312,590363..590506,590553..590764, 590810..590946,590992..591083,591136..591228, 591276..591356)) /locus_tag="CAEBREN_06344" /note="contains similarity to Interpro domain IPR000697 (EVH1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53181.1" /db_xref="InterPro:IPR000697" /db_xref="WormBase:CBN06344" /db_xref="WormBase:WBGene00145069" /translation="MITSELSDFLENDEKESILRAISASDKILSSGICQYLVVKNGEW SKPETGAAVVLFLKNSSERYYRIIVIEPSSESDWEPTVQFDFIINDKKFETIQLHAKL LVLEKNGEEIGLHFYDSKECENFHNSVCKRQSAKNPESSKTPALDGKKEKKKKKKGFF SGLFHHKESNKVLEIGEPTDFRHVESVKMTGEQEDLYLQVMSKLQTVNPEEEEIVKKL IVRNEDKFRQSMMVKKETQTVKVVKEKNKDKEKSRSFFGRSKSKIEDVSQPVVPVLST QIDPLKPDWSSDGPTTTVSASSFSTTSSSIRSSSTVTVGSSFKHSHTFAADPIKNSDW DAPRKDTYGVTNQREPQNIYRFEQERYEQSYTTYGKEEDEKPPELPSRSTSMNVTEQN TRSGPSTPRLPSHRGSYRWATQPEMIPKQSSHVTHQVDEFAEIKLSAKAPVRTAPPPP PSTPPTIKTQVPSVPVKTSPKRQSPQKVAPPPPSPSFNVSTPSSIPPISTKAPPPPPP LPPVATPSSIPPPPPPPPPPPVFHGNDDSDDENTGPPSVRLAAVPESSSDRRSLMDQI RSTDRSKVLKKISETPDSRQSVVSPTSGTIVDQIQNFLDARRAGINPSDSEESDEDDD DDDWSD" gene complement(<591987..>593422) /locus_tag="CAEBREN_25367" /db_xref="WormBase:WBGene00164092" mRNA complement(join(<591987..592559,592611..592795, 592843..593077,593164..593262,593363..>593422)) /locus_tag="CAEBREN_25367" /product="hypothetical protein" /db_xref="WormBase:CBN25367" /db_xref="WormBase:WBGene00164092" CDS complement(join(591987..592559,592611..592795, 592843..593077,593164..593262,593363..593422)) /locus_tag="CAEBREN_25367" /note="contains similarity to Pfam domain PF00635; contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53262.1" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="PFAM:PF00635" /db_xref="WormBase:CBN25367" /db_xref="WormBase:WBGene00164092" /translation="MELPLEISFLCETLSTKSEKILSWGYCNAFIEYDKDGKPIHPEK RCSLVIFFKNNSERYYRLLVADKLTQQMPVITFESKLFTKFRSRGILIDNDEPELLLM NINFKMIGLKFNDSDGCLKFYENVPRRLGNAIRRRETSMDPRPRPLSNHFQHEETDEI VNFRNLEAFQNRNAISLTEDQEEIYAKLSSRLKMKDSNEAALVKQIVIKNEDTLRQSF RVKNKTKVGPISNDAMLDAKSQGSYENIVKDLPNDLFSKTKNGPANPIKEIQTEPKTK IVINAPFSIRQSYYLNISNLSNNQISYTVKSSNPNVLTVYPSIGVLDKRQTTTLTLDF NPKIYRNMGSEVDYLIIDCTDATVGNMEGSSEDFEMPFLIKTLRIEYNS" gene complement(<593723..>594681) /locus_tag="CAEBREN_32282" /db_xref="WormBase:WBGene00194247" mRNA complement(join(<593723..594022,594096..594338, 594385..594537,594622..>594681)) /locus_tag="CAEBREN_32282" /product="hypothetical protein" /db_xref="WormBase:CBN32282" /db_xref="WormBase:WBGene00194247" CDS complement(join(593723..594022,594096..594338, 594385..594537,594622..594681)) /locus_tag="CAEBREN_32282" /note="contains similarity to Pfam domain PF06026; contains similarity to Interpro domain IPR004788 (Ribose 5-phosphate isomerase, type A)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53306.1" /db_xref="InterPro:IPR004788" /db_xref="PFAM:PF06026" /db_xref="WormBase:CBN32282" /db_xref="WormBase:WBGene00194247" /translation="MVTTTGPESELAPIEQAKKRAAFACGEKYVQSGCRLGVGSGSTV KYLVEYLKQGYQSGHLKDIICVPTSFLTKQWLIDSGLPVSDLDAHPELDVCIDGADEV DGQFTCIKGGGGCLAQEKIVQTAAKHFYVIADYLKDSKHLGDRYPAVPIEVLPPASQP LLRSIPRSEGGSCQLRQATKKCGPVVTDNGNFIIDWQFEKNVSGRDWLAIQQRLANTP GIVETGLFIGCVDAVFFAYSDGSVKEIVNSKKH" gene <594955..>596542 /locus_tag="CAEBREN_22024" /db_xref="WormBase:WBGene00160749" mRNA join(<594955..595183,595232..595440,595485..595665, 595741..595841,595887..595980,596027..596159, 596203..>596542) /locus_tag="CAEBREN_22024" /product="hypothetical protein" /db_xref="WormBase:CBN22024" /db_xref="WormBase:WBGene00160749" CDS join(594955..595183,595232..595440,595485..595665, 595741..595841,595887..595980,596027..596159, 596203..596542) /locus_tag="CAEBREN_22024" /note="contains similarity to Pfam domain PF00400; contains similarity to Interpro domains IPR019781 (WD40 repeat, subgroup), IPR015943 (WD40/YVTN repeat-like-containing domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53279.1" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR019781" /db_xref="PFAM:PF00400" /db_xref="WormBase:CBN22024" /db_xref="WormBase:WBGene00160749" /translation="MSKRPVIESEKPAWHDEDDDNVVVSVPKKVKKTFQVEIKRTTDD DNGELNSNEYIGRLQTAFKKRHGAPKWAATSAEDDEEGSLLKTAAGYLAKDVKLPKTT IHTNLLKDFNIGHRYSRGITAVKFHKTRPVLIVGDQGGNVQLFKVSQEVKKDRFLQSA TFTKFPIDSMEIAGQGLTVICSSSRQEYLMQYNMETREVTQLKPPKTVPKQGIQLFAV SHDSQFLAIAGHNSHVYVLHAASMEHITTISLPANATCIKFFPSHSREMWIICETGQV VIANIGLNGAQTKQHTFTDDGAVHGTTLAISQHGDYFATGSDTGIVNVYAGSSCRDSA TPQPLFNVSNLVTSVSSIAFNSDAQLMAICSNIKENHIRLVHVASQTTFKNFPERNGK VTHARCVDFSPSGGYLAVGNDDGCLHVFHIHHFADY" gene <600717..>602656 /gene="Cbn-nhr-10" /locus_tag="CAEBREN_20518" /db_xref="WormBase:WBGene00159243" mRNA join(<600717..600829,601174..601253,601299..601465, 601514..601687,601798..601935,602086..602456, 602506..>602656) /gene="Cbn-nhr-10" /locus_tag="CAEBREN_20518" /product="CBN-NHR-10 protein" /db_xref="WormBase:WBGene00159243" CDS join(600717..600829,601174..601253,601299..601465, 601514..601687,601798..601935,602086..602456, 602506..602656) /gene="Cbn-nhr-10" /locus_tag="CAEBREN_20518" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /codon_start=1 /product="CBN-NHR-10 protein" /protein_id="EGT53268.1" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR001723" /db_xref="InterPro:IPR008946" /db_xref="InterPro:IPR013088" /db_xref="WormBase:CBN20518" /db_xref="WormBase:WBGene00159243" /translation="MTGGGPSSANSSQPEEVCLVCQDISTGYHYGVPSCNGCKTFFRR TIMKNQTFTCQFQKKCPVDKSVRCACRHCRFEKCLQVGMDRNAIQQNRDPIGYTKRTR RYPPIKKIEASEECSPNMMSESDRNEDNFLATLTATEEKCKRLRLSEYMPTRTLIEAV VSPCLLYDDQFMAEHGEPSPRHSYKDLRFATQVDYHYWHERDWFVMIEWAKTLPVFQA LTFPDKLALLRHSAITYPSLVHVFNSPDHGLDTIVFPDGAYFDRTPEPTRPLGFNKKK YQMLDQLLKPIRQMSIDTTEFSAFKAIFFLNPDADDVDATAKKILSDGRSAITNALYR YMVKNKGAEDAGDRFGRLLLLGTVLATMAVEMKEAVLVADFFDQIKFSMFAKQLLFGI KTENA" gene <603345..>604635 /locus_tag="CAEBREN_20129" /db_xref="WormBase:WBGene00158854" mRNA join(<603345..603525,603650..604162,604210..604317, 604403..>604635) /locus_tag="CAEBREN_20129" /product="hypothetical protein" /db_xref="WormBase:CBN20129" /db_xref="WormBase:WBGene00158854" CDS join(603345..603525,603650..604162,604210..604317, 604403..604635) /locus_tag="CAEBREN_20129" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53167.1" /db_xref="WormBase:CBN20129" /db_xref="WormBase:WBGene00158854" /translation="MKHFGAAILALICLQLAESAAVFDRNFTKPYVLKKTWVQNFIKF QYIFEGNQQKPKIVPLGCSPTNVDSDEYLKPGETSIEHDFLFSCEEGEDGVLNYEATA CIDAYGEVMHPGEKRRLSNGTVILHCNIYGGALKKVVERAAGCYFNETIYTEDEKWVE PQVNPADSSIDGRLMQCFRPHYSYYESHVVGCVIGKLGVLIGEFGQLPDGTYVKCVEA ELGHVSLKLVDVKELECKMDDKTYAHASQWTDEKKGANMKCNYGHIVKESCVIGTETL SIGQEVPVSRDCIFLCHPQTNVYICDNYLPEFEIVGEEGDNLGPVEGNQITVDQTENN KKSLKSVFKF" gene complement(<604724..>607822) /locus_tag="CAEBREN_31107" /db_xref="WormBase:WBGene00193072" mRNA complement(join(<604724..604873,604918..605079, 605128..605421,605465..605790,605834..605948, 605995..606175,606233..607105,607162..607506, 607584..>607822)) /locus_tag="CAEBREN_31107" /product="hypothetical protein" /db_xref="WormBase:CBN31107" /db_xref="WormBase:WBGene00193072" CDS complement(join(604724..604873,604918..605079, 605128..605421,605465..605790,605834..605948, 605995..606175,606233..607105,607162..607506, 607584..607822)) /locus_tag="CAEBREN_31107" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002110 (Ankyrin repeat), IPR015880 (Zinc finger, C2H2-like), IPR013087 (Zinc finger, C2H2-type/integrase, DNA-binding), IPR020683 (Ankyrin repeat-containing domain), IPR007087 (Zinc finger, C2H2-type), IPR001357 (BRCT)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53298.1" /db_xref="InterPro:IPR001357" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR015880" /db_xref="InterPro:IPR020683" /db_xref="WormBase:CBN31107" /db_xref="WormBase:WBGene00193072" /translation="MLLAEQQRMAFQQLFAQQAQKEEKKEDQSEDLKTFLKSLNLSPT PSPAPSTSPQVLPLTCENLLQFQVQTQFLNQMATPWFMNPTHRRNHSGPPKRPKKQFI CPYCDRHFTKSYNLLIHERTHTNERPFQCETCNKAFRRQDHLRDHRFIHNKEKPHKCE VCGKGFCQIRTLNVHRSNHHGLTETNTIGGIKLQNSRFGDLEKAQKELKAVFPVKEIS EAKAKMSDILKTFDSSVIGDISKCLTSGDPLDSDKVISAIDYTMSVLETGHFHSTIEL FRQFLKMRNDLMVVEEHVKEMGTKYHVDKNNPVLKLEDPQEISLSFGRGVEIIHDMAK ALQGQESLLEATNYHAAVVKSIRQSNQNQFVKDFFLNPSERIQTLLEELRTLDKLART IKDQDLLKVKEIFIAAMKVNGFPEVFSHVYNQLVDYKFQENEKIRNVHNSKNLSELDL DFSAHKGYLTAASISVGNIKSYFDDIFGLNSKTTKRKTWQNAYGLVVGISISVFFLAL ILILTLYGFTEGGRRKYKKWYLYYYPRKDEFEKRWRYSLFMDRVEGKNALLEAVREIS APNVLKAVKRGAFINAFNKNGNTALHVATKRGYPEIVEILIKNGADRSLLNVHNKTPE QMIPPEYRETHKEKIQRFEKVEKIYKKYQKKKFRLQVPDVFPNSSFHIYVEGRTNDVL TNSFTEKFQSITSEEILPTTTHCIVKTEKDGHLETNDLKLVLWIFFGVIMVKDTWMID CLKDEDLIDRDFDYLIENIKYNGVMYNTVTQWTKAMAKGEIPYLHGVYVAVCIFEITF MALLSTIVTTHGGVMLDKFPEKDAYNIGSRPYLHVDTPPLIIIHDGTVNLEAYRNDPD KMYTLFTEEEFIGFMLRREIKINTNPNPINVAVDETVE" assembly_gap 607127..607136 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(610811..610895) /locus_tag="CAEBREN_26823" /db_xref="WormBase:WBGene00187434" tRNA complement(610811..610895) /locus_tag="CAEBREN_26823" /product="tRNA-Arg" /db_xref="WormBase:CBN26823" /db_xref="WormBase:WBGene00187434" gene complement(<611130..>612259) /locus_tag="CAEBREN_16416" /db_xref="WormBase:WBGene00155141" mRNA complement(join(<611130..611374,611422..612067, 612176..>612259)) /locus_tag="CAEBREN_16416" /product="hypothetical protein" /db_xref="WormBase:CBN16416" /db_xref="WormBase:WBGene00155141" CDS complement(join(611130..611374,611422..612067, 612176..612259)) /locus_tag="CAEBREN_16416" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53325.1" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR008946" /db_xref="InterPro:IPR013088" /db_xref="WormBase:CBN16416" /db_xref="WormBase:WBGene00155141" /translation="MAPRRTRKQLTMEKCVVCSNMTSEFNYKVTSCNTCKMVFRRAIR SKNPIAPCTCSTSKKGCRICKFYACVRAGMDIKSLIILPKLLEQLSSLNENRLQIFFN FQMTQDLGIEEIMNRGFVKKRENNVVFTAHDWVSMEVYSTIQFMKGLNVVNLLTTQDL MYFTKNAYFKSALFFISVRSYTEKWECMTFPGHLDVFPEEMSKSAYNPVLLNRIRCLL ISKFIEFNVTQDELLLLIAIIFCDPCPEDLSSDAVNVISQFRSIYTSALFNVCCQKGN KTGAIRYMNLICISNILTKTMVDLNQAVELFRYWQPDLPLRKLVSDSF" gene complement(<613112..>614217) /locus_tag="CAEBREN_10803" /db_xref="WormBase:WBGene00149528" mRNA complement(join(<613112..613368,613414..613772, 613818..614002,614089..>614217)) /locus_tag="CAEBREN_10803" /product="hypothetical protein" /db_xref="WormBase:CBN10803" /db_xref="WormBase:WBGene00149528" CDS complement(join(613112..613368,613414..613772, 613818..614002,614089..>614217)) /locus_tag="CAEBREN_10803" /note="contains similarity to Pfam domain PF00104; contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53237.1" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR008946" /db_xref="PFAM:PF00104" /db_xref="WormBase:CBN10803" /db_xref="WormBase:WBGene00149528" /translation="RNATVAKVCQVCGSVNGTVNVVQRSYGVSEPLSLSKPTKFHFQN KKVPLKKCRECRYMKCLFAIPDERNRFLTDQFTFLLKELEAKNGMRSHLFLNKASAGG IIAMEERTAHDWANHQMLTTMEYMKTFPLVHQLSEEDAITFIRKKYFDCGIFFMAMYS FINGNDIMLFPGGKDVFPEESVEVQKNNPALFNKIRSRLISSFIELKITEHELLILSV LICSDPYGKTADGKEISLDGRAHVESYRELHRQALYASCMLSHQKKEGRKRYLQLLGI INIVTYTMGDLAKTFTLFDMEKVRMEKLVKDFF" assembly_gap 614334..619346 /estimated_length=5013 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<622174..>623114) /locus_tag="CAEBREN_00377" /db_xref="WormBase:WBGene00139102" mRNA complement(join(<622174..622327,622376..622560, 622604..622795,622839..622972,623054..>623114)) /locus_tag="CAEBREN_00377" /product="hypothetical protein" /db_xref="WormBase:CBN00377" /db_xref="WormBase:WBGene00139102" CDS complement(join(622174..622327,622376..622560, 622604..622795,622839..622972,623054..623114)) /locus_tag="CAEBREN_00377" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53302.1" /db_xref="WormBase:CBN00377" /db_xref="WormBase:WBGene00139102" /translation="MKTLQGFCISSLLLVVLFLTGQSNAEEQKSYPATSAVVTNIAYF HMLDCYATANRSNPLNSLLRLSLDETLYASAKKSADKCVKDRKTTIAHNLTEVFFVSE ITYNQLNAKARDRHRQDADNFRNVNKMARIMHSAYYTDQFDLVFDKETVGEKADVGQA LDGTFSFGCDMSVCKEDGKDKGVIVCHFVRGVPKPRRTITKAEADRRRAMEYGHSSTT REFELISFMCILLSILQITRTLL" gene complement(<623738..>624879) /locus_tag="CAEBREN_20935" /db_xref="WormBase:WBGene00159660" mRNA complement(join(<623738..623988,624099..624765, 624814..>624879)) /locus_tag="CAEBREN_20935" /product="hypothetical protein" /db_xref="WormBase:CBN20935" /db_xref="WormBase:WBGene00159660" CDS complement(join(623738..623988,624099..624765, 624814..624879)) /locus_tag="CAEBREN_20935" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53157.1" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR008946" /db_xref="InterPro:IPR013088" /db_xref="WormBase:CBN20935" /db_xref="WormBase:WBGene00159660" /translation="MNSPPMNNCAICTRPSHAFNYGVLSCNACKMFFRRAILGKSEKC CKNNGNCDLQNTILNCKLCRFQKCLSLGMRLNTNQYVNLSDLINNLSKRNSERANKLL NFQCVDDPNLRDVLKKFPVVTKKPTDQPFSKAEWGFMEQLATIEFMSKFEFTQLLEDE DLYFILKASCFKTASFIKAIRSYSLKSGILQYPDGESIVPAQLLPFCDSTFLSRVESR LIGKLIDLNIKEEEFLLLTAVLFCNPAVSHLSDGGREIIGIHQKIYSSALFQYCLVTY QQFGPARFTELLSLCHVINKHVEDVGQLCFLFTFRPPTEKYKRLCAELLSS" gene <625550..>626824 /locus_tag="CAEBREN_25747" /db_xref="WormBase:WBGene00164472" mRNA join(<625550..625663,625710..626018,626069..626449, 626492..>626824) /locus_tag="CAEBREN_25747" /product="hypothetical protein" /db_xref="WormBase:CBN25747" /db_xref="WormBase:WBGene00164472" CDS join(625550..625663,625710..626018,626069..626449, 626492..626824) /locus_tag="CAEBREN_25747" /note="contains similarity to Pfam domain PF00102; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53221.1" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR003595" /db_xref="PFAM:PF00102" /db_xref="WormBase:CBN25747" /db_xref="WormBase:WBGene00164472" /translation="MAPSKSRDKKEATKTNRRSKPGSNSKNGPLSGKSIKAKPTNTVS DGQPPADLADQLAKTKNRPQMYEMMKGHAAGSVPEFLKFVPENVRMPVPIRDGRRFRL GGDEEYFPGQYLRMEGAEYVIVQAPNKKNYGQIWRAVQQDRMRLMVCLCHDEQMSKDD DSKCFIYFPTEPEQSMEVDQKKGTLTIVCKSREGLSMGAMKYELEFTDSEAVMEKSGD DPTAVNEKTRKITLFHMNTWSGKKPESGNVLEMAQNVALFFREVKKQEIAILRRSMEN FVPPVLIQSFDGINRSAIGWVALMLLRDVEKRECFDVPNLMKTIMKWRLGSLSTYYQF CFCMAVCLVIGKEVKWCEKDCDSALNDLTAKFGDRKLNELGNLA" gene <627897..>628965 /locus_tag="CAEBREN_15644" /db_xref="WormBase:WBGene00154369" mRNA join(<627897..627956,628005..628674,628724..>628965) /locus_tag="CAEBREN_15644" /product="hypothetical protein" /db_xref="WormBase:CBN15644" /db_xref="WormBase:WBGene00154369" CDS join(627897..627956,628005..628674,628724..628965) /locus_tag="CAEBREN_15644" /note="contains similarity to Pfam domain PF00104; contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53271.1" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR008946" /db_xref="PFAM:PF00104" /db_xref="WormBase:CBN15644" /db_xref="WormBase:WBGene00154369" /translation="MPIQICPLCKNVKQTQFLYGVDCCNTCSMKHRSHCKKSEPKMDP RTYNGDRDCHFCIFKQKISSQQSLNQSISCIPPKKNSLVNLLQEISILDNRREKLYRT KLFILNYKADEAISKPIEFVVKPKNKILNFEEWSAMNQLTAIDFFKNLNFVQHLKDDD RKIFIRRMRFRLGIFSTAFRSFQNKQSYLTLIDDVDIFPDITGHFHAPALLEQIRREL IGKVIELNITKEEFLLLLMLHLVVYEVEGISAGGATILNDQRNIYSSALLEDCMLQNS RTGSSRFQDLMSTCVITNKTYHSIGYFAVLFRMKEPNREGNDLIRFE" gene complement(<630133..>634994) /locus_tag="CAEBREN_00295" /db_xref="WormBase:WBGene00139020" mRNA complement(join(<630133..630160,630734..630804, 630999..631097,631144..631554,631707..631846, 631894..632050,632100..632256,632330..632433, 632690..632844,634270..634438,634591..634659, 634911..>634994)) /locus_tag="CAEBREN_00295" /product="hypothetical protein" /db_xref="WormBase:CBN00295" /db_xref="WormBase:WBGene00139020" CDS complement(join(630133..630160,630734..630804, 630999..631097,631144..631554,631707..631846, 631894..632050,632100..632256,632330..632433, 632690..632844,634270..634438,634591..634659, 634911..634994)) /locus_tag="CAEBREN_00295" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR017983 (GPCR, family 2, secretin-like, conserved site), IPR001879 (GPCR, family 2, extracellular hormone receptor domain), IPR000832 (GPCR, family 2, secretin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT53209.1" /db_xref="InterPro:IPR000832" /db_xref="InterPro:IPR001879" /db_xref="InterPro:IPR017983" /db_xref="WormBase:CBN00295" /db_xref="WormBase:WBGene00139020" /translation="MADATSPFNAPILDNSTAKLSEMVDSGWNLLASTSVQAFNGAMD VLEESYPLCKKMLDHNKLFPERDPNDTRIWCNATYDTVLCWPPTPANSSVTLQCPHMK GLDPNKNITKDCHVSGVWSGRNAGEMGPSLPGWTNFTMCYTDEVIYIMQNLNNESLTI AQEVARNARKLEFVGLGLSLVSLILAISIFSYFRRLRVFRNLLHLHLMIAMLMVVIIR LVLYIDLIFTGDIGPHTNSAEGKTINTMPIVCEGMFFFLEYFKTVTFCWMFLEGIYLN NQIVFGFFNSEPKLLPYFIAGYGIPLIHTMLWLFVVLIKKDFKVERCLGSYYLEPEFW ILDGPRMAELVINLFFICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNI MQTIPFAPTRDNIMVFAVWTYTASFTYMYQGLMVASIYCFTNKEVNHVLKAFYARYRL LHKSQNELRRGSRSVASHYAAKNGTSNPNANQTNNADESGKLSPFPSRSKKGSDDSTT KLMKDTVMEEEKNANNNGYGSAGEMTPLREGSNRVTKSP" CONTIG join(ABEG02002083.1:1..20785,gap(254),ABEG02002084.1:1..2195, gap(1462),ABEG02002085.1:1..4074,gap(10),ABEG02002086.1:1..48991, gap(10),ABEG02002087.1:1..21005,gap(600),ABEG02002088.1:1..59035, gap(1041),ABEG02002089.1:1..124840,gap(298), ABEG02002090.1:1..31887,gap(4205),ABEG02002091.1:1..62235,gap(10), ABEG02002092.1:1..4539,gap(2714),ABEG02002093.1:1..31809,gap(1032), ABEG02002094.1:1..1158,gap(4016),ABEG02002095.1:1..1650,gap(1002), ABEG02002096.1:1..11594,gap(354),ABEG02002097.1:1..32563,gap(5451), ABEG02002098.1:1..1237,gap(188),ABEG02002099.1:1..51099,gap(10), ABEG02002100.1:1..42843,gap(5534),ABEG02002101.1:1..25396,gap(10), ABEG02002102.1:1..7197,gap(5013),ABEG02002103.1:1..27806) //