LOCUS GL379792 2072269 bp DNA linear CON 13-MAR-2015 DEFINITION Caenorhabditis brenneri unplaced genomic scaffold Scfld02_6, whole genome shotgun sequence. ACCESSION GL379792 ABEG02000000 VERSION GL379792.1 DBLINK BioProject: PRJNA20035 BioSample: SAMN02953693 KEYWORDS WGS. SOURCE Caenorhabditis brenneri ORGANISM Caenorhabditis brenneri Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2072269) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis brenneri Sequencing and Analysis Consortium TITLE Direct Submission JOURNAL Submitted (21-JUL-2010) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA REFERENCE 2 (bases 1 to 2072269) CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (28-JUL-2011) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA REMARK Annotation update by submitter COMMENT The organism is Caenorhabditis brenneri Sudhaus & Kiontke, 2007; strain PB2801. This strain is derived from the wild isolate LKC28. It was inbred in Scott Baird's laboratory for 20 generations by transferring one gravid female per generation. The strain LKC28 was established from worms collected by Hernan Ruiz in 2003 from roots of Liriope (Convallariaceae) grown in a nursery in Costa Rica (Provinciade Alajuela) (Sudhaus & Kiontke 2007). LKC28 and three other strains of C. brenneri were described in Sudhaus & Kiontke, 2007. Annotation was added to the scaffolds in July 2011. ##Genome-Assembly-Data-START## Assembly Method :: PCAP v. 9/3/04 Assembly Name :: C_brenneri-6.0.1 Genome Coverage :: 9.5x Sequencing Technology :: ABI ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..2072269 /organism="Caenorhabditis brenneri" /mol_type="genomic DNA" /submitter_seqid="Scfld02_6" /strain="PB2801" /db_xref="taxon:135651" /chromosome="Unknown" gene complement(<5714..>8467) /gene="Cbn-vha-16" /locus_tag="CAEBREN_13544" /db_xref="WormBase:WBGene00152269" mRNA complement(join(<5714..5803,5852..5923,6586..6840, 6936..7093,7892..8070,8127..8298,8347..>8467)) /gene="Cbn-vha-16" /locus_tag="CAEBREN_13544" /product="CBN-VHA-16 protein" /db_xref="WormBase:WBGene00152269" CDS complement(join(5714..5803,5852..5923,6586..6840, 6936..7093,7892..8070,8127..8298,8347..8467)) /gene="Cbn-vha-16" /locus_tag="CAEBREN_13544" /note="contains similarity to Pfam domain PF01992; contains similarity to Interpro domain IPR002843 (ATPase, V0/A0 complex, subunit C/D)" /codon_start=1 /product="CBN-VHA-16 protein" /protein_id="EGT54237.1" /db_xref="InterPro:IPR002843" /db_xref="PFAM:PF01992" /db_xref="WormBase:CBN13544" /db_xref="WormBase:WBGene00152269" /translation="MGEFLFNIDHGYLEALTRGLKGGLLAQSDYANLVQCETLEDLKL HIQSTDYGNFLANEPGAITVQVIDEKLKEKLVTEFTHLRNNALEPLATFLDYITYSYM IDNIILLITGTLHQRPINELINKCHPLGSFEQMEAIHIASTPAELYNAVLVDTPLANY FVDCINEQDLDEMNVEVIRNTLYKAYIEDFYKFCANLGGKTAEVMCDILAFEADRRSI IITINSFDTELSKDDRQKLYPHCGKLYPDGLNSLSRADDYDQVKQICEFYSDYKPLFE GSGNGPGEKTLEDKFFEHEVKLNVHSYLHQFHFGVFYAFIKLKEQEMRNIIWIAECIS QRHRTKIDNYIPIL" gene <20248..>29675 /gene="Cbn-kin-32" /locus_tag="CAEBREN_08180" /db_xref="WormBase:WBGene00146905" mRNA join(<20248..20325,22993..23092,23137..23236,24284..24478, 24608..24917,25719..26801,27626..27700,27895..28134, 28556..28843,29544..>29675) /gene="Cbn-kin-32" /locus_tag="CAEBREN_08180" /product="CBN-KIN-32 protein" /db_xref="WormBase:WBGene00146905" CDS join(20248..20325,22993..23092,23137..23236,24284..24478, 24608..24917,25719..26801,27626..27700,27895..28134, 28556..28843,29544..29675) /gene="Cbn-kin-32" /locus_tag="CAEBREN_08180" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine-protein kinase domain), IPR005189 (Focal adhesion kinase, targeting (FAT) domain), IPR020685 (Tyrosine-protein kinase), IPR001245 (Serine-threonine/tyrosine-protein kinase), IPR017442 (Serine/threonine-protein kinase-like domain), IPR019749 (Band 4.1 domain), IPR008266 (Tyrosine-protein kinase, active site), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /codon_start=1 /product="CBN-KIN-32 protein" /protein_id="EGT54270.1" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR005189" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR019749" /db_xref="InterPro:IPR020635" /db_xref="InterPro:IPR020685" /db_xref="WormBase:CBN08180" /db_xref="WormBase:WBGene00146905" /translation="MEGLARVFLIGGASKAVRYDEQTTIERVIHVVARGIGISQVAVA HFALRLVTGPSPQTAGSGDSLWLHPMLRIAQLPHIYAKHLPIGVSDEIKLEMRMRFMP QSVYELQVTDSSAFVYLHEQVVDEFFSHVAWRSSVEVALEVAALKVCRDFAEHQHNKG ADHHLDELDIDACIQSLIPNVLHNPGLKHSHLKKQFTAYIKKFSATSPNESIIRSLAL LLDVVKFDVEVFKASLGAGWTNPVELVVGPHAGLSYRLNERCDTSRLLELRTIADITI RKMENGSEKTLMQLKLSGAAKPVMITLSTEELAQSLAHLLDGYQMLYNQRDSVFKLKG IERCETMTMHEATIIRPKTPTNIDNNIRLRRELITLKELIGGGQFGNVYKAIYHDQEK DERIAVAVKVCKTDAEPADTQLILQESSLMRNFRHAHIIQLIGVCVDQPMWLVLELAP HGELREYLQQEKDWLPLRTLTLFCSQICDSLVYLHSTRFVHRDIAARNILVCSPQCVK LADFGLSRALDYDAVYTASRGKLPIKWLAPESVNYRQFSMASDVWMFGVCMWEIYSLG IKPWAGVTNSDVIMHIEQGSRPPCPEKCPTALYNFVRSKMWAIEPNKRPTVDQIYAII EDVRQQILRNVPPDQIIVGKPMNPAGVIVAEMSSLPSLTLYRTMEEQKRQAEEDAKWL EEDDGEDDDELERIPSTSHSSVENIRTSNGYLHHTPTSTRSLRFEDKPSRELRRSVDG VCDAVTKLQNSFNNLTHNDDFLHSVKEVTSQLREMLIVASGMRDRVTTATQRTEVDMT KTLIANDMKQMSRVMAKLQVNGDQTTFNTLRRDVVRICGELAVNCTTLQLQLTQPPLE NEFSALLSNC" gene complement(<29872..>34445) /locus_tag="CAEBREN_18728" /db_xref="WormBase:WBGene00157453" mRNA complement(join(<29872..30186,30294..30399,30446..30609, 30813..31040,31081..31193,32700..32916,33039..33172, 33303..33376,33436..33522,33581..33724,33990..34203, 34313..>34445)) /locus_tag="CAEBREN_18728" /product="hypothetical protein" /db_xref="WormBase:CBN18728" /db_xref="WormBase:WBGene00157453" CDS complement(join(29872..30186,30294..30399,30446..30609, 30813..31040,31081..31193,32700..32916,33039..33172, 33303..33376,33436..33522,33581..33724,33990..34203, 34313..34445)) /locus_tag="CAEBREN_18728" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR004245 (Protein of unknown function DUF229), IPR000917 (Sulfatase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54378.1" /db_xref="InterPro:IPR000917" /db_xref="InterPro:IPR004245" /db_xref="WormBase:CBN18728" /db_xref="WormBase:WBGene00157453" /translation="MHHPFMLQYIPRQKLFSKFLIYGGLLQLLIISIFLAYRSEDKPE ESAFHDHDTTNNYMNVCSLPVYDYWHPKVMQHIDYDFDPTSHCDRDFKPFTELMNGSW RIVEERKGMNCSARCFTGIDDYHVNITDWMPPGPVSCEFLEAVCWKDNREVYGYIHTQ IIPKKSEVKTLVPNPPSVFVFLFDSMGTGQAKRSFPKTLSALSSRLESIEFPFVNKVG KSIEDINGENYGGVNIKADWDKNQYCYSFLNQSIFEDFEKFGYTTLSIDDWKAQMVNY PNCHGFQQSPTHHYMHPFYMIYEKFGMKITQKHLAGQFCREERHPAFEYFQDFVETYK EEPKFTWTWINSLGHDYINGFMRVDEEMLEIIERNLEMFENSFVLFMGDHGLRLGKKR FMETDIGSLEMHNPYLSISIPKSLRKNQAILEIMRQNSRKLQTHFDTRATILDILKYQ PESGFSDRTTMNIPNEKGHSYLRRQPSFPRTCGQLPIPPEYCICRVEKTPVTDENLRN RFGNLLIDHVHDLLDNANFSSICERFEFLEVTSLLHYGHLNHSESTHNYEIIVMADAP SYAQFQTILMHNKETSQVAFGNIVRLDKYGDTGDCTSSSRFEKMCFCRNLTFRQKWEY RFIKQWKRLEAAIEYYLL" gene <35767..>39418 /locus_tag="CAEBREN_09703" /db_xref="WormBase:WBGene00148428" mRNA join(<35767..35842,35884..36035,36085..36216,36258..36376, 37551..37688,38337..38430,38472..38585,38633..38778, 38826..38983,39030..39105,39160..>39418) /locus_tag="CAEBREN_09703" /product="hypothetical protein" /db_xref="WormBase:CBN09703" /db_xref="WormBase:WBGene00148428" CDS join(35767..35842,35884..36035,36085..36216,36258..36376, 37551..37688,38337..38430,38472..38585,38633..38778, 38826..38983,39030..39105,39160..39418) /locus_tag="CAEBREN_09703" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54374.1" /db_xref="WormBase:CBN09703" /db_xref="WormBase:WBGene00148428" /translation="MLFTTFIVCLAFFPSWSSTTTIDEKAGILDEGLKALRKMTTGTG DPFASLKDFGQDIGKFMRATSSIYAIAEKNPPPGSDEYKMLNAFNTQVSEIMKKMDGD DEYDFYTGLKASFKEYETEVTLPIEKMKNYTDMIVDPEIKKTESDLRNYRRACTSARE GFLNEDGASMLKNNFSTYEEASKAFFDEILLGRGNKDIWDLATGDRCYIRELMVRTTF NHRRIDSFVKKLKNQLKDLEYIHENCAKVYATGIYPNFPANIILVLLYTPKWIDESMS AAWPVIHNHIFHDQIRNLVKQPENFDRKMLKKASELTSSILNNTGITNYKYEMLIVKA PKKNFQFHFANLTNNFYFDEGDFGFNTILVRRPFNYSNRMDQWNLEKKMRRLADYADE LKINITYEMKDLYDSAKIADIAEGLKNKLGSFVSKNGFQGFAIARKWEKTPFKACSAI DDVQFSYDSFSAIYNFTYQNSGNMLQHCETFNFYFFS" assembly_gap 45373..46641 /estimated_length=1269 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<58025..>63728) /locus_tag="CAEBREN_22036" /db_xref="WormBase:WBGene00160761" mRNA complement(join(<58025..58213,58429..58689,58734..58839, 60386..60549,60976..61088,61308..61524,62454..62587, 62643..62755,62796..62882,62924..63067,63329..63542, 63608..>63728)) /locus_tag="CAEBREN_22036" /product="hypothetical protein" /db_xref="WormBase:CBN22036" /db_xref="WormBase:WBGene00160761" CDS complement(join(58025..58213,58429..58689,58734..58839, 60386..60549,60976..61088,61308..61524,62454..62587, 62643..62755,62796..62882,62924..63067,63329..63542, 63608..63728)) /locus_tag="CAEBREN_22036" /note="contains similarity to Pfam domain PF02995; contains similarity to Interpro domain IPR004245 (Protein of unknown function DUF229)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54410.1" /db_xref="InterPro:IPR004245" /db_xref="PFAM:PF02995" /db_xref="WormBase:CBN22036" /db_xref="WormBase:WBGene00160761" /translation="MYQVISSRKSKKVLFRFLVFVVLFQIIFILFIYEGGERVEESAF HEHDSTNNYMNVCSLPVYDYWHPKVMRYVDYTFDTTKNCDKGFKPYTELRNGEWRIVE EKKGMNCSARCFERLDNWNLKFFSWTPPGPVSCEFLEAVCWEDGKEIYGYIHTQIIPK KPKTEPKTKNPPNVFVFLLDSLSTGSAKRSLPKTLETLNRRLEAVEFPFVNKVGENSL PNGIALWFGKLIEKINGENYGGRNIEADWSRSQYCNTFLNYSMMEEFRDHGYMTLYSD DLEIQVLNHPHCQGLKDAPTDHYMHPFYLNYYKYGKEITRKHLEGHLCREHRHPAFEY FQEFLDVYKDKPKFTWTWLTTVGHDLFNGFLRADQELVEIIERNMEVYQPESGFTDTT TLSISNEKGHSYLRRQPSFPRTCGHLPIPPEYCICQVEKTVVTDENLRWRFGNLLIDH INYLIRNAGFSSLCEKYELKKVISLKHHGHLHHSESSHNYEIIVMTTAPIYAQFQTIL MHNMKNNEVKFGNVMRMDRYGKTGDCTRSDQFQKMCFCRNLSFRDKMEYLMVLKESSE YCTSSIAEHDLKGVFSHFRAIAKPWKPFSTSKLPSLFFNPPATSVTFLAPIRCL" gene 60596..60670 /locus_tag="CAEBREN_27122" /pseudo /db_xref="WormBase:WBGene00187733" tRNA 60596..60670 /locus_tag="CAEBREN_27122" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN27122" /db_xref="WormBase:WBGene00187733" gene complement(64125..64196) /locus_tag="CAEBREN_26666" /db_xref="WormBase:WBGene00187277" tRNA complement(64125..64196) /locus_tag="CAEBREN_26666" /product="tRNA-Gly" /db_xref="WormBase:CBN26666" /db_xref="WormBase:WBGene00187277" gene <65027..>67566 /locus_tag="CAEBREN_12862" /db_xref="WormBase:WBGene00151587" mRNA join(<65027..65108,66028..66473,67111..>67566) /locus_tag="CAEBREN_12862" /product="hypothetical protein" /db_xref="WormBase:CBN12862" /db_xref="WormBase:WBGene00151587" CDS join(65027..65108,66028..66473,67111..67566) /locus_tag="CAEBREN_12862" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54394.1" /db_xref="WormBase:CBN12862" /db_xref="WormBase:WBGene00151587" /translation="MEAAPKPNYIPSLQDLCLPVVIDHIQRDVYSNFPDKLTTKLSDL LFDNLHIPHLAIPEKIMEKIKKHFSISHLTLGQHNYDFFSERQRALQPQMITKLELLS LKNSLITKPNPNGKKKGTCMYYQGAVLYSEFFVGKSLNIVLFLTKNLPPECRQILEAL VLQGTSVLFPQGWIRDLHKSFPALKVLDITGCSMANTEFKLLCDTYKNLTHLSIGKTK VNDLTGIEALTELTYLSLEDLEYKKEPNFYSVFLLEKLVVLDISSNTSSASTAKLLTK RKTSLSNLQFLACCGNELTDEIVGVLFQQNPKLQNMAVVSKYILKSADVLS" gene <69028..>70354 /locus_tag="CAEBREN_25661" /db_xref="WormBase:WBGene00164386" mRNA join(<69028..69437,70075..>70354) /locus_tag="CAEBREN_25661" /product="hypothetical protein" /db_xref="WormBase:CBN25661" /db_xref="WormBase:WBGene00164386" CDS join(69028..69437,70075..70354) /locus_tag="CAEBREN_25661" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54124.1" /db_xref="WormBase:CBN25661" /db_xref="WormBase:WBGene00164386" /translation="MFKTLSKELRFNGQVFLHTGNMLYFNRDRLLKPGQFTDTEISHF KTSLLICFEEDTGHNSIHFLAYMKLLSMALNISIERGFRTDELLPTILKKIGPYRGNQ RLVEMCFANALKLYISEQESSRKKIFKMECFLNIETSMRLAQRFPKNYALEFLLQIYR FHLNGHNREPYSTEELEVLMADIEIMMNQYHQNSENSGIFFYVANRSSNLVAQDFAAW VFQKVYRQRCI" gene <74467..>75645 /locus_tag="CAEBREN_19776" /db_xref="WormBase:WBGene00158501" mRNA join(<74467..74573,74847..>75645) /locus_tag="CAEBREN_19776" /product="hypothetical protein" /db_xref="WormBase:CBN19776" /db_xref="WormBase:WBGene00158501" CDS join(74467..74573,74847..75645) /locus_tag="CAEBREN_19776" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54342.1" /db_xref="WormBase:CBN19776" /db_xref="WormBase:WBGene00158501" /translation="MSTDDAPTPPGDIFPFLHLPYLPRKELFEYMSPSALVAMYQTCS TAHHLFPPLAGTVSIHYDLGKPLLHVESFHSNQKSVLPFIAFKSLRKIFTILELEDVY VEIDENKDYTPLVEFLKSYGRCRTIKICSKNEDYCLNMEGIRDLLGGFQFVKRVEFEA QIENWPSGSPRFLKSSVVDISNGTALDRRDIRRITRGSKEVRINSSRLSDKSFNFIIL DWLHGRNKTLRYLEITVRDPSERQGRRILNGVRFRLGNGGSFQPKYLKETVRFHTGWN VERDSDGRRATVVSTRKKFRFIVWD" gene complement(75803..75875) /locus_tag="CAEBREN_27248" /pseudo /db_xref="WormBase:WBGene00187859" tRNA complement(75803..75875) /locus_tag="CAEBREN_27248" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN27248" /db_xref="WormBase:WBGene00187859" gene complement(<80365..>84517) /locus_tag="CAEBREN_24709" /db_xref="WormBase:WBGene00163434" mRNA complement(join(<80365..80504,81165..81993,82511..83019, 84217..>84517)) /locus_tag="CAEBREN_24709" /product="hypothetical protein" /db_xref="WormBase:CBN24709" /db_xref="WormBase:WBGene00163434" CDS complement(join(80365..80504,81165..81993,82511..83019, 84217..84517)) /locus_tag="CAEBREN_24709" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000793 (ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal), IPR004100 (ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal), IPR020003 (ATPase, alpha/beta subunit, nucleotide-binding domain, active site), IPR000194 (ATPase, alpha/beta subunit, nucleotide-binding domain), IPR005723 (ATPase, V1 complex, subunit B)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54233.1" /db_xref="InterPro:IPR000194" /db_xref="InterPro:IPR000793" /db_xref="InterPro:IPR004100" /db_xref="InterPro:IPR005723" /db_xref="InterPro:IPR020003" /db_xref="WormBase:CBN24709" /db_xref="WormBase:WBGene00163434" /translation="MSDITKNPTEDVEIEQENFKPGVKMVPKKGQKAQDDKMEDDKKS ENPDKGISSSEDNDDEKSVNGSTVDDEEDKESVAGESTGNQKERMESAIQQMLDSIGT DPVDVNQTITGHKSAIIRNYNTNPRLSYQTVGGVNGPLVILNDVKFPQFSEIVKITLP DGTKRSGQVLEITKNKAVVQVFEGTSGIDCKNTICEFTGDILRTPVSEDMLGRTFNGS GKPIDKGPPVLAEDFLDINGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFS AAGLPHNEIAAQIVRQGGLVQLPDKPHEQTNFAIVFAAMGVNMETARFFKSDFEENGS MENVCLFLNLANDPTIERIITPRIALTAAEYLAYQCEKHVLVVLTDMSSYAEALREVS AAREEVPGRRGFPGYMYTDLATIYERAGRVEGRDGSITQIPILTMPNDDITHPIPDLT GYITEGQIYVDRQLYNRLIYPPINVLPSLSRLMKSAIGEGMTREDHSDVSNQLYACYA IGKDVQNMKAVVGEEALSSDDLLYLEFLIKFEKNFIAQGHDENRTVFESLDIGWQLLR IFPREMLKRIPESTLEKYYPRGGAKE" assembly_gap 83612..84132 /estimated_length=521 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <86542..>87195 /locus_tag="CAEBREN_25084" /db_xref="WormBase:WBGene00163809" mRNA <86542..>87195 /locus_tag="CAEBREN_25084" /product="hypothetical protein" /db_xref="WormBase:CBN25084" /db_xref="WormBase:WBGene00163809" CDS 86542..87195 /locus_tag="CAEBREN_25084" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001232 (SKP1 component), IPR016072 (SKP1 component, dimerisation), IPR011333 (BTB/POZ fold), IPR016073 (SKP1 component, POZ)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54332.1" /db_xref="InterPro:IPR001232" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR016072" /db_xref="InterPro:IPR016073" /db_xref="WormBase:CBN25084" /db_xref="WormBase:WBGene00163809" /translation="MSAEAAPVVANAAAPEGMYYRVAGNDGVEFKVSELAIQQSETLQ RLVSTMCYTPEDVEKKDAIPIENIDSATLKLVFEWCEHPKGEAIPEEDDSVPKNVVIP EFDAKLMGIDNMQLFHLICAANYLNIKQLLNVSCKKVANMAKGKAPEELRVIFEIPTD EEDETAEKAAKGAEEKAAKEAAEKKAAEKDTTDKVAAKEDITEKVDENDVQGASDSA" gene 96007..96078 /locus_tag="CAEBREN_26643" /pseudo /db_xref="WormBase:WBGene00187254" tRNA 96007..96078 /locus_tag="CAEBREN_26643" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN26643" /db_xref="WormBase:WBGene00187254" gene <101744..>103362 /locus_tag="CAEBREN_07383" /db_xref="WormBase:WBGene00146108" mRNA join(<101744..101828,101921..102036,102085..102285, 102504..102731,102775..102999,103195..>103362) /locus_tag="CAEBREN_07383" /product="hypothetical protein" /db_xref="WormBase:CBN07383" /db_xref="WormBase:WBGene00146108" CDS join(101744..101828,101921..102036,102085..102285, 102504..102731,102775..102999,103195..103362) /locus_tag="CAEBREN_07383" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54128.1" /db_xref="WormBase:CBN07383" /db_xref="WormBase:WBGene00146108" /translation="MTSQPLRMLQLILLLIPGSYGCLPTGLGGILGGGGGCSGRPGGC AAAAAAPQYAAPLPPAMYAFTPQVYSQPPPPPPPPPPPAIIPAPAPARHLPSEVVIPV SAASSYQGMYQDRPQAPSINPDYQGTAPLSFAGEIASSEDPANTVLDPLKYIEHVSVS HTPSIQVGPPIQESYPPSPAPADPFQNINVPEEQTAQPELQQQQKPPQIQVAPSSAST EDTYLPGPPEKEMNNATRTLSTYYNQLCTGDKITVGEKETISSATKKCELLKCVAANA MPDSHGSYTVTYLSNATSRSNSKGNYCLSMKELPVKSKRVIRKFDEMMTSEESTNAVR RKIFKL" gene complement(103040..103114) /locus_tag="CAEBREN_26614" /pseudo /db_xref="WormBase:WBGene00187225" tRNA complement(103040..103114) /locus_tag="CAEBREN_26614" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN26614" /db_xref="WormBase:WBGene00187225" gene <103792..>104233 /locus_tag="CAEBREN_07292" /db_xref="WormBase:WBGene00146017" mRNA join(<103792..103864,103917..>104233) /locus_tag="CAEBREN_07292" /product="hypothetical protein" /db_xref="WormBase:CBN07292" /db_xref="WormBase:WBGene00146017" CDS join(103792..103864,103917..104233) /locus_tag="CAEBREN_07292" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54305.1" /db_xref="WormBase:CBN07292" /db_xref="WormBase:WBGene00146017" /translation="MGDDQLAKAGLYVDDFNQLRLIDPDVAELLQSAQDKSSEFNEQL KNFQTTTGGLIESIEEFANVVETEKIRAMMLRNTQDRDMAENDPVLLQMTIRELTVEK ERLRVELEAVRKIEKEQEEYIQMMTEH" gene complement(<104319..>106035) /gene="Cbn-tag-300" /locus_tag="CAEBREN_23999" /db_xref="WormBase:WBGene00162724" mRNA complement(join(<104319..104585,104707..105042, 105085..105870,105925..>106035)) /gene="Cbn-tag-300" /locus_tag="CAEBREN_23999" /product="CBN-TAG-300 protein" /db_xref="WormBase:WBGene00162724" CDS complement(join(104319..104585,104707..105042, 105085..105870,105925..106035)) /gene="Cbn-tag-300" /locus_tag="CAEBREN_23999" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000793 (ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal), IPR004100 (ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal), IPR020003 (ATPase, alpha/beta subunit, nucleotide-binding domain, active site), IPR000194 (ATPase, alpha/beta subunit, nucleotide-binding domain), IPR005723 (ATPase, V1 complex, subunit B)" /codon_start=1 /product="CBN-TAG-300 protein" /protein_id="EGT54177.1" /db_xref="InterPro:IPR000194" /db_xref="InterPro:IPR000793" /db_xref="InterPro:IPR004100" /db_xref="InterPro:IPR005723" /db_xref="InterPro:IPR020003" /db_xref="WormBase:CBN23999" /db_xref="WormBase:WBGene00162724" /translation="MTEVADPAYFEPRNDVNSPITSHRTALIRNYSTKPRLNYQTVCG VNGPLVILRDVKFPMYNEIVKITLPNGELRMGQVLETFKNKAVVQVFEGTTGVDAKHT KCEFTGDIFRSPVSIDMLGRIFNGSGKAIDKGPPVMAEDYLDINGQAINPYNRIYPEE MIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQIVRQGGLVQMPDRANEAVNFA IVFAAMGVNMETARFFKQDFEECGSMDNVCLFLNLANDPTIERIITPRIALTAAEFFA YHCGKHVLVVLTDMSSYAEALREISAAREEVPGRRGFPGYMYTDLATIYERAGRVKGR EGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRLIYPPINVLPSLSRLM KSAIGEGMTREDHSDVSNQLYACYAVGKEVQAMKSVVGEEALSPDDLLYLEFLGKFEK NFIAQGHYENRSIVDSLNIGWELLRIFPREMLKRIPITLLEKYYPRKKQ" gene complement(<106421..>107481) /gene="Cbn-chp-1" /locus_tag="CAEBREN_07588" /db_xref="WormBase:WBGene00146313" mRNA complement(join(<106421..106741,106787..107355, 107406..>107481)) /gene="Cbn-chp-1" /locus_tag="CAEBREN_07588" /product="CBN-CHP-1 protein" /db_xref="WormBase:WBGene00146313" CDS complement(join(106421..106741,106787..107355, 107406..107481)) /gene="Cbn-chp-1" /locus_tag="CAEBREN_07588" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR007051 (Cysteine/histidine-rich domain), IPR017447 (CS domain)" /codon_start=1 /product="CBN-CHP-1 protein" /protein_id="EGT54126.1" /db_xref="InterPro:IPR007051" /db_xref="InterPro:IPR017447" /db_xref="WormBase:CBN07588" /db_xref="WormBase:WBGene00146313" /translation="MVDEGKLQCYHKGCGNLFDPNDNHNESCTYHPGAPYFHDAYKIW TCCDKKSTDFGTWMGYKGCTRGKHSNEKPVDIVKIAAVKEIRPEKEEDVIVWKGLNKS GKSQNKDTTQRVDVNLNVEVTPGATAAIEKKMKEIEEAAQSTDIQIGAPCRNNGCATT FDGSKSRDNRCVHHPGAAIFHEGMKYWSCCNKKTSNFGAFLEQVGCTNGEHKFRNNEI VSKFREDWFSSNGFVTINVYCRGALPETANIISDGHTLRVSMKHGFGNADVDLEYDLW DEVIPEESRVVIGERKVEISLKQKHGTGWPRLKFDPELDAKKEEA" gene complement(<107829..>108629) /gene="Cbn-pas-3" /locus_tag="CAEBREN_12917" /db_xref="WormBase:WBGene00151642" mRNA complement(join(<107829..108208,108257..>108629)) /gene="Cbn-pas-3" /locus_tag="CAEBREN_12917" /product="CBN-PAS-3 protein" /db_xref="WormBase:WBGene00151642" CDS complement(join(107829..108208,108257..108629)) /gene="Cbn-pas-3" /locus_tag="CAEBREN_12917" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001353 (Proteasome, subunit alpha/beta), IPR016050 (Proteasome, beta-type subunit, conserved site), IPR000426 (Proteasome, alpha-subunit, conserved site)" /codon_start=1 /product="CBN-PAS-3 protein" /protein_id="EGT54308.1" /db_xref="InterPro:IPR000426" /db_xref="InterPro:IPR001353" /db_xref="InterPro:IPR016050" /db_xref="WormBase:CBN12917" /db_xref="WormBase:WBGene00151642" /translation="MARRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGIV IAAERKNVHKLLDDSVLTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYG EEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYAGWDKHYGYQLYQSDPSGNYTGWK ATCIGSNHQAAVTLLKQEYKSPSLDEAKKLAIKVLWKTLDVKLASEKVEMAVLTRRDG KTVLEELSTKEVDALIAEHEKKEKEAETAEKK" gene <108937..>109930 /gene="Cbn-use-1" /locus_tag="CAEBREN_00139" /db_xref="WormBase:WBGene00138864" mRNA join(<108937..109032,109081..109136,109183..109258, 109305..109515,109564..109739,109790..>109930) /gene="Cbn-use-1" /locus_tag="CAEBREN_00139" /product="CBN-USE-1 protein" /db_xref="WormBase:WBGene00138864" CDS join(108937..109032,109081..109136,109183..109258, 109305..109515,109564..109739,109790..109930) /gene="Cbn-use-1" /locus_tag="CAEBREN_00139" /note="contains similarity to Pfam domain PF09753; contains similarity to Interpro domain IPR019150 (Vesicle transport protein, Use1)" /codon_start=1 /product="CBN-USE-1 protein" /protein_id="EGT54136.1" /db_xref="InterPro:IPR019150" /db_xref="PFAM:PF09753" /db_xref="WormBase:CBN00139" /db_xref="WormBase:WBGene00138864" /translation="MACITENELKFLRLLERTKRLTKENLSANVWKVTAATKILNNMI YVLQNADKTNDILHEYRQEVLQLKLLAEAESKSSTEESLKVIEKIPRVFADVQVDVSD GKSANDSFEKESAAGLRAIQRSIYRSDLRKQLLSTTKHKIADTSADETFMKNERLEED LANDLLSMTRSLKTVMSAAGEVIKDDNQRLTKMQKQIEDNKAALETESTRLEHHAYKC GFDCMRLFLVVLLFWSFIAMVVIMKVFPKRAGY" gene <110078..>112258 /gene="Cbn-aap-1" /locus_tag="CAEBREN_00590" /db_xref="WormBase:WBGene00139315" mRNA join(<110078..110253,110579..110838,110936..111201, 111407..>112258) /gene="Cbn-aap-1" /locus_tag="CAEBREN_00590" /product="CBN-AAP-1 protein" /db_xref="WormBase:WBGene00139315" CDS join(110078..110253,110579..110838,110936..111201, 111407..112258) /gene="Cbn-aap-1" /locus_tag="CAEBREN_00590" /note="contains similarity to Pfam domain PF00017; contains similarity to Interpro domains IPR001720 (PI3 kinase, P85 regulatory subunit), IPR000980 (SH2 motif)" /codon_start=1 /product="CBN-AAP-1 protein" /protein_id="EGT54421.1" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001720" /db_xref="PFAM:PF00017" /db_xref="WormBase:CBN00590" /db_xref="WormBase:WBGene00139315" /translation="MATTPGTPHGGVSHNLLEQTWYWGDADRSQVSQALSDQPDGSFI VRNASTPGDYTLSVKYKGQVKLLRIVVNDGKCGFNMDSLAHDSVTKLIDFHHNISLNI FNDALDVRLLYPVGTRHSSQNGKPILKRTQLQQRLILSAKNDHDWRERLEMENLRAVH LAFERGAKLYDSAHQELERAESLFHALSQSVRDNEIKAEKLKQVFVTNLGVCREVNEA KSTSEMLKGVFKNNNTFLKESIRRIDAELTASKDKKRTLSVILDEISTKRDNSKTRLC KLMELRSAVYDQMEVSLLTRMASMLDAGAELIASEPTKVTQLLVDLELKWTPAQYLMC GSSKENAANALIHARYRVAQLDKAVGLKREPMDGIFLIRGSASQADKLVLSVLHGERV SHCLIEQNEEGWGFEHSNVYLTTIADFVRYYAHFSLETHAEAIKTCLRMPAFDAATSD TSKPLRNGPGQTFTPLPLSKKYMEEAMLTDDPTKPRTPEPRPDSWNSTSSTDTRLTRP TNFPETIPE" gene complement(<113836..>115730) /locus_tag="CAEBREN_08151" /db_xref="WormBase:WBGene00146876" mRNA complement(join(<113836..114204,114355..114474, 114520..115136,115182..115509,115560..115672, 115718..>115730)) /locus_tag="CAEBREN_08151" /product="hypothetical protein" /db_xref="WormBase:CBN08151" /db_xref="WormBase:WBGene00146876" CDS complement(join(113836..114204,114355..114474, 114520..115136,115182..115509,115560..115672, 115718..115730)) /locus_tag="CAEBREN_08151" /note="contains similarity to Interpro domain IPR011042 (Six-bladed beta-propeller, TolB-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54377.1" /db_xref="InterPro:IPR011042" /db_xref="WormBase:CBN08151" /db_xref="WormBase:WBGene00146876" /translation="MRDEDLDSAEIAEKLDDLRQVLSESAENVKLTNKQLENLESFLE LAKCRIHSVKKAKEAAMRAETERQAKEQQRIRAEEQARAAERERERRRVAEDQAKVED VRQSLESSMVEQTHSTASESSFVEDDEIEEPTSNMPTVDFLSFIQSDGAYLMLKKEAD NVVNTLTREGLGYPLGVAYDEKLKHWLICDRNLNKIIVFNMDEDDYKICDGVDNPTAV IIYKEGHNAAILCSDKESPGQPAIYIYNYNTNDPYIQCFASHSQKKYGLNFQLRGLAK SVSGNLLSLEHGRPAKKLRVFKRDVGGKGFEIRGSQSPCFIATYRSTVAVSDLSVNKV FILNLDDRDWGNVSCQVIRIIESGPEIPLDVLANQNGFRFVAGMQFDINGHLLIGDAK GHSIKLYDSTDYNFLHRVSSDFVLPYVSSFHVNQNGECMLLDVKGHKKVHWVRMTSIP DILPWMGPGGARENGRRADHQQNGGRPDYQNGGRPDYQQHGGRPDYQQNGMRADYQQQ KPRRGGYQNRN" gene complement(<116833..>117216) /locus_tag="CAEBREN_20888" /db_xref="WormBase:WBGene00159613" mRNA complement(<116833..>117216) /locus_tag="CAEBREN_20888" /product="hypothetical protein" /db_xref="WormBase:CBN20888" /db_xref="WormBase:WBGene00159613" CDS complement(116833..117216) /locus_tag="CAEBREN_20888" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR007125 (Histone core), IPR002119 (Histone H2A), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54355.1" /db_xref="InterPro:IPR002119" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN20888" /db_xref="WormBase:WBGene00159613" /translation="MSGRGKGGKAKTGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQR VGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGV TIAQGGVLPNIQAVLLPKKTGADKE" gene <117499..>117870 /locus_tag="CAEBREN_10912" /db_xref="WormBase:WBGene00149637" mRNA <117499..>117870 /locus_tag="CAEBREN_10912" /product="hypothetical protein" /db_xref="WormBase:CBN10912" /db_xref="WormBase:WBGene00149637" CDS 117499..117870 /locus_tag="CAEBREN_10912" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR000558 (Histone H2B), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54141.1" /db_xref="InterPro:IPR000558" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN10912" /db_xref="WormBase:WBGene00149637" /translation="MAPPKPSAKGSKKSAKTVAKPKDGKKRKHARKESYSVYIYRVLK QVHPDTGVSSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTISSREIQTAVRLILPG ELAKHAVSEGTKAVTKYTSSK" gene complement(<119401..>119712) /locus_tag="CAEBREN_17103" /db_xref="WormBase:WBGene00155828" mRNA complement(<119401..>119712) /locus_tag="CAEBREN_17103" /product="hypothetical protein" /db_xref="WormBase:CBN17103" /db_xref="WormBase:WBGene00155828" CDS complement(119401..119712) /locus_tag="CAEBREN_17103" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019809 (Histone H4, conserved site), IPR009072 (Histone-fold), IPR004823 (TATA box binding protein associated factor (TAF)), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone), IPR001951 (Histone H4)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54365.1" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR004823" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="InterPro:IPR019809" /db_xref="WormBase:CBN17103" /db_xref="WormBase:WBGene00155828" /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGV KRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGFG G" gene <119932..>120342 /locus_tag="CAEBREN_03029" /db_xref="WormBase:WBGene00141754" mRNA <119932..>120342 /locus_tag="CAEBREN_03029" /product="hypothetical protein" /db_xref="WormBase:CBN03029" /db_xref="WormBase:WBGene00141754" CDS 119932..120342 /locus_tag="CAEBREN_03029" /note="contains similarity to Pfam domain PF00125; contains similarity to Interpro domains IPR007125 (Histone core), IPR000164 (Histone H3), IPR009072 (Histone-fold)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54347.1" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="PFAM:PF00125" /db_xref="WormBase:CBN03029" /db_xref="WormBase:WBGene00141754" /translation="MARTKQTARKSTGGKAPRKQLATKAARKAAPAAGAVKKPHRYRP GTVALREIRRYQKSTELLLRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLV GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" gene complement(<120997..>122977) /locus_tag="CAEBREN_09343" /db_xref="WormBase:WBGene00148068" mRNA complement(join(<120997..121590,121723..121983, 122027..122170,122451..122517,122573..122675, 122725..122850,122920..>122977)) /locus_tag="CAEBREN_09343" /product="hypothetical protein" /db_xref="WormBase:CBN09343" /db_xref="WormBase:WBGene00148068" CDS complement(join(120997..121590,121723..121983, 122027..122170,122451..122517,122573..122675, 122725..122850,122920..122977)) /locus_tag="CAEBREN_09343" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001345 (Phosphoglycerate/bisphosphoglycerate mutase, active site), IPR003094 (Fructose-2,6-bisphosphatase), IPR013079 (6-phosphofructo-2-kinase), IPR013078 (Histidine phosphatase superfamily, clade-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54182.1" /db_xref="InterPro:IPR001345" /db_xref="InterPro:IPR003094" /db_xref="InterPro:IPR013078" /db_xref="InterPro:IPR013079" /db_xref="WormBase:CBN09343" /db_xref="WormBase:WBGene00148068" /translation="MPGPAGVPQRKMTYFVPKSDNSNEQVRVPNVIALVGLPARGKTY ISHKLCRYLNWIGIKTKAFNVGEYRRRACNLEEEGESEFFSPNNARGQKLRDECARLA IEDMGRYLDAKEGEVAILDATNTTRERRHILMNYCKNLMHEPPFRVFFVESVCDDEDI INSNITEVKINSPDYKGIMSQEEAKEDFLKRIENYRMQYEPLDEEYDEELSYIKVINA GKSFYVHNVNGHVQSRVVYFLMNIHLLPRSIYLSRHGESEYNRIGRLGGDSPLSENGL TYAGRLLQYFETENLSDFRVWSSQKIRAAQTASHLKDLAGHTEFWKCLDEIDAGICEG LTYEDFESRYPKQFAERDKDKYHYRYPSGESYEDLVARLEPVIMELERQSNVLVISHQ AVLRCILAYFTNKNRDDLPYLKVPLHTVIKLTPKAYSCEVEMFPFKIEAVDTYREKPK " gene complement(<123444..>125269) /locus_tag="CAEBREN_28252" /db_xref="WormBase:WBGene00190217" mRNA complement(join(<123444..123558,123613..124094, 124174..124290,125051..>125269)) /locus_tag="CAEBREN_28252" /product="hypothetical protein" /db_xref="WormBase:CBN28252" /db_xref="WormBase:WBGene00190217" CDS complement(join(123444..123558,123613..124094, 124174..124290,125051..125269)) /locus_tag="CAEBREN_28252" /note="contains similarity to Pfam domain PF01764; contains similarity to Interpro domain IPR002921 (Lipase, class 3)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54280.1" /db_xref="InterPro:IPR002921" /db_xref="PFAM:PF01764" /db_xref="WormBase:CBN28252" /db_xref="WormBase:WBGene00190217" /translation="MRYGFTFFSCLLTLLPVDCIAKRINQDFDYELSRRALEFAAAAY SLDPEPCVVKNNATVLYANKVECDYMRDECWSVIAADNESIFVGFSGTKSKEQLVTEL VESIGRPKHKLHNAGSVHYYFYSALKTMWSPMEKLLEELKEAMPNHRIVFTGHSLGGA IASIASTVFVRNFPETSQRTLSITFGQPRVGNQEYAATHDRLVAAGSWRLIHGRDIVA HIPICVEGYGRSCIPFYNHGSYHHGVEIWFPGNMTNRDTFKVCTGIPLNEDNSCSNAH RYFDITDHLFYFGHHVSDYGVNKCIDPINKPVHI" assembly_gap 124542..124815 /estimated_length=274 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<125460..>127135) /locus_tag="CAEBREN_05913" /db_xref="WormBase:WBGene00144638" mRNA complement(join(<125460..126653,126704..126821, 126875..126990,127046..>127135)) /locus_tag="CAEBREN_05913" /product="hypothetical protein" /db_xref="WormBase:CBN05913" /db_xref="WormBase:WBGene00144638" CDS complement(join(125460..126653,126704..126821, 126875..126990,127046..127135)) /locus_tag="CAEBREN_05913" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002687 (Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain), IPR012976 (NOSIC), IPR019175 (Prp31 C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54415.1" /db_xref="InterPro:IPR002687" /db_xref="InterPro:IPR012976" /db_xref="InterPro:IPR019175" /db_xref="WormBase:CBN05913" /db_xref="WormBase:WBGene00144638" /translation="MSLAEELMADFDDDDDDDLEDIPDLGENLKSVKKEELDDDDIEE ATEEPMDTSKYSTVHDVAKLARSPEYVALVRQLEIELKRPQEEVKVTAPLEADPQYKL VVKLSHVAADIDNEINVIHKFVRDKYEKRFPELETLVPTALNYLATVQLLGNDIGSKA LKEQLGHILDASTCMVVSVTVSTTQGVKLEPEELEVIMDACNVAAQLHVNRLEMHQLV EWRMALIAPNLVALLGAATTAHLVSQAGGLAPLATMPSCNVQVLGKTKKNLIGFSSVS TNPHHGFIYFHPLVQKMPPDLKNKAAKILAAKVTLVARIDAQHESPNGQQGQDFLSLV ESKFEKMLEPPPVKANKALPKPLDKASKKRGGRRMRKMKERLGMTDLRKSANRMNFGE LAEDVMQEHMGFDIGQVKTGNVTGGRIRAAAVDQKTRARMSQKMMRQLERQKANGGMT SIRSKVAGTASSVTFTPIQGLEIINPAAQEQQQSSSSSNYFSSSGSFVNIDRQTL" gene <127666..>130605 /locus_tag="CAEBREN_14965" /db_xref="WormBase:WBGene00153690" mRNA join(<127666..128246,128294..128505,128550..128757, 128804..128903,128958..129113,129158..129786, 130050..130405,130457..>130605) /locus_tag="CAEBREN_14965" /product="hypothetical protein" /db_xref="WormBase:CBN14965" /db_xref="WormBase:WBGene00153690" CDS join(127666..128246,128294..128505,128550..128757, 128804..128903,128958..129113,129158..129786, 130050..130405,130457..130605) /locus_tag="CAEBREN_14965" /note="contains similarity to Interpro domains IPR011990 (Tetratricopeptide-like helical), IPR008940 (Protein prenyltransferase), IPR019734 (Tetratricopeptide repeat)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54424.1" /db_xref="InterPro:IPR008940" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR019734" /db_xref="WormBase:CBN14965" /db_xref="WormBase:WBGene00153690" /translation="MVDSASSASVRPQVREIFDRLPTDPSRTVAEEINEMMKYYAFDD AIFLAELNYETDKSTNSDALLLYADCLYRANKKEECYGLLRSAKLSGAQLHYLFAKVA YEMSKFDECRGALFEHDNGAIRQDILDDPRVAAHANLLNAQMLCDENHMDLALESCQK SLDENILLWTAIITYLRFGGQDLAQTFEKHKDKTNSASPAVSPSTVSMHSATPSPSSA AGPSTSSAPPTGGSTGNSWQRPTMASRRAARTSAVSAGSSATRTTRNTPTTTPRQSTP VAARTRPAAPRKSSRISEMSTRRADSTASSTAGSRASLFTEPDRPHTRATHSSRNRAN AAINSDTENRNANSRTRSGMSGTSTRGSSSSQRANPVRSSIRIADAAAIANKSAKSTN QRKRNEKQPLVSRNSNLTRSLSGSTNSVASSASRRSEDDLAEMNPPISSAASMNNDDL MEEIDSLYDPAYKKFFGLYRHIALIEESISTYNWKAADVLFAKLEREFILNTSMVRLQ LGRACFEQSEYRECRNILDDLHKRKTWKVDGTELLSTSMWHLQDTHALSALAQTLTTE SRERAQSWCVAGNCFSLQRQHSQAIECMERAIQLDKRFAYAYTLLGHELIVQDELDKA AGSFRSALLLSPRDYRAWYGLGLVHLKKEQNLIALTNIQKAVSINPTNRAMLCSLSQI EQQRGQVDTALVLIDRALTLNPLDVACRFNRARLLFEAQRNEECLVELDKLKASSPDE AFIFHLLARVHRRMGNTHLSLLNYSWAAELDPRGEQNVADNNAINREEYEDDEYGS" gene complement(<131036..>136874) /locus_tag="CAEBREN_09578" /db_xref="WormBase:WBGene00148303" mRNA complement(join(<131036..131245,131695..133012, 133644..133947,133999..134323,134755..134949, 134995..135173,135750..135926,136503..136765, 136816..>136874)) /locus_tag="CAEBREN_09578" /product="hypothetical protein" /db_xref="WormBase:CBN09578" /db_xref="WormBase:WBGene00148303" CDS complement(join(131036..131245,131695..133012, 133644..133947,133999..134323,134755..134949, 134995..135173,135750..135926,136503..136765, 136816..136874)) /locus_tag="CAEBREN_09578" /note="contains similarity to Interpro domain IPR015943 (WD40/YVTN repeat-like-containing domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54212.1" /db_xref="InterPro:IPR015943" /db_xref="WormBase:CBN09578" /db_xref="WormBase:WBGene00148303" /translation="MPHTVPGCLHPSNGRNAIDWNDGGLIAYGSHNVIFIVDVLRYKR IQSIEHHQSAINIVRWAPPRSPFSDSSPQPIIASADISGHIVISNSISAVQKNQFSHP NSSVLQMFWYPWKDISRDFLLVLHSSSTVVLWNTVTGEKVWNHTYSHVPLFDFSIDPF SLRNVIFSSSGNKVLVCSDIALSEPASSGHLFQVASDDNTSVNTNIYLITYHKAYRNT VFIAINSSLYLVNPELMCCLARVPIESNIVSWMPSSRRDALFAVHSNGATTFRIAKFE PTEEKKPNASFSMDKICQTECVRALNNQRIVAASLCPTTQSTVAVLYQNGKMAFWQLS NGRIPLLYRASFIEDLLEFNDSLSTKPIGELSLHQLSQMGSLSSGVTCVRMRPMDELA KVENDPFANTALGTLHLAAVGTNSGTVHLVDVFTSQIFRDFSVQPSLVKCLEWGGVYS LVTAGYNHSLSASQIVRNDVFITDIRTGLARRIRPETDESPITIIRVSYYHCYLAIAF QREPLEIWDLKGLRMLRKMSRSCPLIIDMAWSNKHHSIKTTESTLQSVYRENLVLLDS ENRIYHITLRGLHVRDGKMVNTQWKSASAQICAMTWKDDMLAVGDVEGNLVVWDLGRR QSRQVRDVSHSRVLRMTFSRLAGDHTMAVLHSKEVTLWDTEAMTRIQSIRMDASKQCL DADLCGLSPLVLSNDNTLRFVVSNAKNQPLMDKDVPFIYQDDTTGIIRNRLEASGSRK SSGEKSEENFLEDTLAWLENQKAPLIETLEADLSKLRREKVVRRFIGDHFSADLLSIV IDRFAPSDKDHLAPNLQMFWENSAFKERESRVISVACAAEQAMERRLVEQAVVVGGPA KERVTDRLIVSADLRYASIKAALLVSCQDNEKAKSLIKLIATNLIASDLIEDGVELLF LVGAGGDACKYLQSQKLWTKSIVYAKMGLDDPSEVEAKWIGHLAEEAKQIRVLADASR RNWPDVVEATSSADSILARLILRTTTSTPPLSSCPTP" gene <137308..>142073 /locus_tag="CAEBREN_21892" /db_xref="WormBase:WBGene00160617" mRNA join(<137308..137362,137410..137495,137564..138070, 138115..138403,138988..139338,139677..141919, 141969..>142073) /locus_tag="CAEBREN_21892" /product="hypothetical protein" /db_xref="WormBase:CBN21892" /db_xref="WormBase:WBGene00160617" CDS join(137308..137362,137410..137495,137564..138070, 138115..138403,138988..139338,139677..141919, 141969..142073) /locus_tag="CAEBREN_21892" /note="contains similarity to Interpro domain IPR006849 (IKI3)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54139.1" /db_xref="InterPro:IPR006849" /db_xref="WormBase:CBN21892" /db_xref="WormBase:WBGene00160617" /translation="MKNLQIGSVKTFENEQIAGADQFAVHPILQTIAVSTQNQLILLE DNNVASTISWNNERRGVEVISLAFRTDGNQIVAILADGRALIVEDGEVMELEIADVSD PTVTSAEWTSDEQILALADNKTLYLADTTLTYFMQRPLLFSEHERKSVPVNVGWGSES TQFRGSAGKLKPGEKIEKEREKIEQNSKKTSVHWRWDGEIVAVSFYSEESALRNLTIF DRNGEILNNMNIRNIYLSHCFAHKPNANLMCSATLENGSDDRIVFYERNGETRNSYVV KWPSNQSESRRIIERIEWNSTGTILAMQTSLEDGSRLEFWHLSNYEFTRKCFWRFAET TINWKWSTVESQNIEILLGSGQFFSIHIAPVASFSDVISQNVVVATDELRMYSLCRRV VPPPMCDYSIQCLSDVVAYTTSPRHVHVITADWKIISFSQDTDGYKFNSDRASIDEVL HSEVTDGVICGFVYDEPTESFIIWVASHGTHIVCRVGANFEKLFEADNIGWIGVNPQN QHIEIALNDGKFVDLTTKETLFKIEQFDSIEVHFAENHHVILANNSMLLIDSSRVSQD AVSILTRGPDILLIDFDNKLRFVDVHSAKTQEDVRDVEAGCELVACDAHSANVILQAT RGNLETIQPRRYVMAQTKEFLNRKEYISAFKWMKKHRVDMSFAMKYKGEDLQNDMEYW LKSTNDSQLLEQLLVSCTEIFEETGSALCLAVARFIGDIEDVERKTKMFPLLLTALLR SKPSRINECLKEVQEHSEKVIERKDVFTRHSLHHISFFVPAKELFNCALSTYDLKLAQ QVAEASNYDPKEYLPVLNKLNRVACPLERQYRINVVREAWTDAISSLLVLDSKAEAED VWWNDIKEIVQREALHQKALTLVKPDDKRYKECCDLYAVELERKVHWKEAALFYELSG NVEKTLKCWEMSRDVDGLAASARRLQVDPGKLKIHAIKMSGALREARQPKELAKALKL AGSASSQIVQVLCDAFEWTEASREIEAGKYEGLRTAAVSRNEQITMDLERRSAEFDKY KKRLTVVRENKLKRVEQYAAGEVDDLRDDISVISSISSRSGSSKVSMASTVRRRKQIE KKKSSLKEGGEYEDSALLNALAENYRWLETIGSELCQLIPVLMTVGCFAQALQTRSLY DELSSKLQKSKASIWPETLSIQHLPGPLYALFDANQEPSPIPMPPVFRMEPELFPPPS SFSVVFP" gene complement(<142509..>142979) /locus_tag="CAEBREN_10787" /db_xref="WormBase:WBGene00149512" mRNA complement(<142509..>142979) /locus_tag="CAEBREN_10787" /product="hypothetical protein" /db_xref="WormBase:CBN10787" /db_xref="WormBase:WBGene00149512" CDS complement(142509..142979) /locus_tag="CAEBREN_10787" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019809 (Histone H4, conserved site), IPR009072 (Histone-fold), IPR004823 (TATA box binding protein associated factor (TAF)), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone), IPR001951 (Histone H4)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54420.1" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR004823" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="InterPro:IPR019809" /db_xref="WormBase:CBN10787" /db_xref="WormBase:WBGene00149512" /translation="MFAVDIAVQGILGRPRQQPPNDQDFPERFMATPSPSPSPTPPHR APPSGAGNSGKGMGRGLKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARKGGVKRISG LIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTVYGFGG" gene complement(<143920..>145604) /locus_tag="CAEBREN_20701" /db_xref="WormBase:WBGene00159426" mRNA complement(join(<143920..144097,144144..144755, 145579..>145604)) /locus_tag="CAEBREN_20701" /product="hypothetical protein" /db_xref="WormBase:CBN20701" /db_xref="WormBase:WBGene00159426" CDS complement(join(143920..144097,144144..144755, 145579..145604)) /locus_tag="CAEBREN_20701" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54123.1" /db_xref="WormBase:CBN20701" /db_xref="WormBase:WBGene00159426" /translation="MDGITYNCRYTEQLHVRVLFIGCNGYEKNFKFIYYLLDLFRTHM KRIDVNLNEIKNIPRFLNEPFTHQIEELVSIYGGVSTAKINEFFENLKLNQPLLLAQI SVPTKRRIELNEILLNSNELNLRNIMGITGENLLNFNGSHLYLGICSPGLGTDDIIAW IRKWLDGNDTKLCEALINFNQGFEYDQQKIISEFDTKQWDPTKRARGYIIKGRSYYQK LRDGTRRDYAIKAIGHDIERRDGLLATIRFSDCRRWLAFLVWHNRWPGPPQFR" assembly_gap 150601..150610 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 154292..154920 /estimated_length=629 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 155686..155757 /locus_tag="CAEBREN_27570" /pseudo /db_xref="WormBase:WBGene00188181" tRNA 155686..155757 /locus_tag="CAEBREN_27570" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN27570" /db_xref="WormBase:WBGene00188181" gene complement(164744..164813) /locus_tag="CAEBREN_27940" /db_xref="WormBase:WBGene00188551" tRNA complement(164744..164813) /locus_tag="CAEBREN_27940" /product="tRNA-Gly" /db_xref="WormBase:CBN27940" /db_xref="WormBase:WBGene00188551" gene <171440..>172991 /locus_tag="CAEBREN_23095" /db_xref="WormBase:WBGene00161820" mRNA join(<171440..171489,171833..172444,172814..>172991) /locus_tag="CAEBREN_23095" /product="hypothetical protein" /db_xref="WormBase:CBN23095" /db_xref="WormBase:WBGene00161820" CDS join(171440..171489,171833..172444,172814..172991) /locus_tag="CAEBREN_23095" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54140.1" /db_xref="WormBase:CBN23095" /db_xref="WormBase:WBGene00161820" /translation="MSKKLRVIMDGITYNCRYTEKSNARVLFTGCNGYEKNFKFIYYL LDLFRTHMKRIQVILNEIKNIPRFLSEPFTHQIEDSILSSGGVSTAKINKFFENLKLN QPLSLAGIFSPTKRKIELNDILLNSNDLNLKNIMGITGETLLNFNGSHLYLSVCSPGL GTDDLITFIRKWLNGNDTKLCEVIIHFDQGFECDQQKIVSEFDTKQWDPTERARDYII KGRLYYQKLPDGTRRDYAIKATGHDIERRDGLLATIRFSDCRRWFGFLVWHNRWPGPP QYR" gene complement(173195..173266) /locus_tag="CAEBREN_26684" /pseudo /db_xref="WormBase:WBGene00187295" tRNA complement(173195..173266) /locus_tag="CAEBREN_26684" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN26684" /db_xref="WormBase:WBGene00187295" gene <187140..>187457 /locus_tag="CAEBREN_00907" /db_xref="WormBase:WBGene00139632" mRNA <187140..>187457 /locus_tag="CAEBREN_00907" /product="hypothetical protein" /db_xref="WormBase:CBN00907" /db_xref="WormBase:WBGene00139632" CDS 187140..187457 /locus_tag="CAEBREN_00907" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR007125 (Histone core), IPR009072 (Histone-fold), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone), IPR004823 (TATA box binding protein associated factor (TAF)), IPR001951 (Histone H4)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54171.1" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR004823" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN00907" /db_xref="WormBase:WBGene00139632" /translation="MSGRGKGGKGLGKGLGGTVRHRLVLHNVIEEITEPAIRRLARRG GVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYG FGG" assembly_gap 190488..190497 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(194141..194212) /locus_tag="CAEBREN_27040" /pseudo /db_xref="WormBase:WBGene00187651" tRNA complement(194141..194212) /locus_tag="CAEBREN_27040" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN27040" /db_xref="WormBase:WBGene00187651" gene complement(<195279..>195587) /locus_tag="CAEBREN_12078" /db_xref="WormBase:WBGene00150803" mRNA complement(<195279..>195587) /locus_tag="CAEBREN_12078" /product="hypothetical protein" /db_xref="WormBase:CBN12078" /db_xref="WormBase:WBGene00150803" CDS complement(195279..195587) /locus_tag="CAEBREN_12078" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR004823 (TATA box binding protein associated factor (TAF)), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone), IPR001951 (Histone H4)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54411.1" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR004823" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN12078" /db_xref="WormBase:WBGene00150803" /translation="MSGRGKGGKGRQGPKKRHRMVLKDNIQGITKPAIRRLARKGGVK RISEPIYEETRGVLKVFLENVIRDAVNYCKHAKRKTVTTMDIVYALKRQGRTLYGFGG " gene <196980..>197300 /locus_tag="CAEBREN_19972" /db_xref="WormBase:WBGene00158697" mRNA <196980..>197300 /locus_tag="CAEBREN_19972" /product="hypothetical protein" /db_xref="WormBase:CBN19972" /db_xref="WormBase:WBGene00158697" CDS 196980..197300 /locus_tag="CAEBREN_19972" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR004823 (TATA box binding protein associated factor (TAF)), IPR006565 (Bromodomain transcription factor), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone), IPR001951 (Histone H4)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54163.1" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR004823" /db_xref="InterPro:IPR006565" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN19972" /db_xref="WormBase:WBGene00158697" /translation="MSGRGKGGKGRGKGLQGPKKRHRLVLKDNIQGITKPAIRRLARR GGVKRISNLVYEETRGVLRVFLENVIRDAVTYCEHAKRKTVTTMDVVYALKRQGRTLY GFGG" gene complement(<198728..>199099) /locus_tag="CAEBREN_00498" /db_xref="WormBase:WBGene00139223" mRNA complement(<198728..>199099) /locus_tag="CAEBREN_00498" /product="hypothetical protein" /db_xref="WormBase:CBN00498" /db_xref="WormBase:WBGene00139223" CDS complement(198728..199099) /locus_tag="CAEBREN_00498" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000558 (Histone H2B), IPR007125 (Histone core), IPR009072 (Histone-fold), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54389.1" /db_xref="InterPro:IPR000558" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN00498" /db_xref="WormBase:WBGene00139223" /translation="MAPPKPSAKGSKKSAKTVAKPKDGKKRKHARKESYSVYIYRVLK QVHPDTGVSSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTISSREIQTAVRLILPG ELAKHAVSEGTKAVTKYTSSK" gene <199382..>199765 /locus_tag="CAEBREN_21449" /db_xref="WormBase:WBGene00160174" mRNA <199382..>199765 /locus_tag="CAEBREN_21449" /product="hypothetical protein" /db_xref="WormBase:CBN21449" /db_xref="WormBase:WBGene00160174" CDS 199382..199765 /locus_tag="CAEBREN_21449" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR007125 (Histone core), IPR002119 (Histone H2A), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54185.1" /db_xref="InterPro:IPR002119" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN21449" /db_xref="WormBase:WBGene00160174" /translation="MSGRGKGGKAKTGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQR VGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGV TIAQGGVLPNIQAVLLPKKTGADKE" gene <200325..>202353 /gene="Cbn-mtm-1" /locus_tag="CAEBREN_00912" /db_xref="WormBase:WBGene00139637" mRNA join(<200325..200382,200433..200539,200615..200830, 200876..201916,201964..202054,202103..202206, 202255..>202353) /gene="Cbn-mtm-1" /locus_tag="CAEBREN_00912" /product="CBN-MTM-1 protein" /db_xref="WormBase:WBGene00139637" CDS join(200325..200382,200433..200539,200615..200830, 200876..201916,201964..202054,202103..202206, 202255..202353) /gene="Cbn-mtm-1" /locus_tag="CAEBREN_00912" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR010569 (Myotubularin-related), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000340 (Dual specificity phosphatase, catalytic domain), IPR004182 (GRAM)" /codon_start=1 /product="CBN-MTM-1 protein" /protein_id="EGT54329.1" /db_xref="InterPro:IPR000340" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR004182" /db_xref="InterPro:IPR010569" /db_xref="InterPro:IPR016130" /db_xref="WormBase:CBN00912" /db_xref="WormBase:WBGene00139637" /translation="MSQEPIDLKLLPAESVIWTEKNVAYIGPFGKFPGKIVITRYRLV FLVGDGGKTFETWKLDIPLGHVSRIEKVGGRSTSAAMRGDDNYGFIVLCKDYRMYKFA CSPTTNRKNICDSLNRYSFPITHNFPMFAFVHCAESPRLAKDGWRVYSAEKEYERLGI PKSKLWDIVDINKDYKFSETYPRIFVIPRASLEKGKPFLKKLGEFRSKERIPVLSWID QHTLASITRCSQPMTGIAGKRSADDETHLSNIMNANANCRELLILDARPAVNAKLNKA KGGGYEENYLTASLTFLNIHNIHVVRDSLKRMCSALIPRVDEKNYYKALDESKWLNHI QSILEGAVKAVFNVDTEKQSVLVHCSDGWDRTAQLTSLAMIQLDSYYRTIEGFIVLIE KEWCSFGHKFGERIGHGDDSYNDSERAPIFVQFCDCLWQIMRQFPWAFEFTQDLLISM LDEMYSCKYGTFLFNSEKIRIQDNRCNETTISYWSYVLENKKKFRNPMFRERSKRAKK VLYVNPSFCLLHVWTDYYARSNPHVITPNKEEIQQPGVQFVNEKKQLLDEIMALDEAV QESDA" gene <202846..>205008 /locus_tag="CAEBREN_18950" /db_xref="WormBase:WBGene00157675" mRNA join(<202846..203056,203556..204007,204724..>205008) /locus_tag="CAEBREN_18950" /product="hypothetical protein" /db_xref="WormBase:CBN18950" /db_xref="WormBase:WBGene00157675" CDS join(202846..203056,203556..204007,204724..205008) /locus_tag="CAEBREN_18950" /note="contains similarity to Interpro domains IPR020940 (Thymidylate synthase, active site), IPR000398 (Thymidylate synthase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54400.1" /db_xref="InterPro:IPR000398" /db_xref="InterPro:IPR020940" /db_xref="WormBase:CBN18950" /db_xref="WormBase:WBGene00157675" /translation="MNDKMNKENIIIDESTTRKEVSKEQHVNQDEYKYLEQVKQILKE GTRRNDRTGTGTISIFGMQSKYCLRNGTIPLLTTKRVYWKGVLEELLWFISGSTDGKL LAAKNVKIWEKNGDRSFLDNLGFTTREEGDLGPVYGFQWRHFGAKYVDCHTDYTGQGV DQLAEVIRQIKEEPDSRRIIMSAWNPSDLGQMVLPPCHTMCQFYVENGELSCQLYQRS GDMGLGVPFNLASYGLLTHMLAKVCNLKAGTLVHTLGDAHVYTNHEEALKIQLEREPY AFPKIRFTRDVTSIDDFTADMIVLDDYKCHGKIAMDMAV" gene complement(<205142..>206963) /locus_tag="CAEBREN_04844" /db_xref="WormBase:WBGene00143569" mRNA complement(join(<205142..205419,205664..205786, 206004..206480,206807..>206963)) /locus_tag="CAEBREN_04844" /product="hypothetical protein" /db_xref="WormBase:CBN04844" /db_xref="WormBase:WBGene00143569" CDS complement(join(205142..205419,205664..205786, 206004..206480,206807..206963)) /locus_tag="CAEBREN_04844" /note="contains similarity to Pfam domain PF00917; contains similarity to Interpro domains IPR002083 (MATH), IPR013322 (TRAF-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54316.1" /db_xref="InterPro:IPR002083" /db_xref="InterPro:IPR013322" /db_xref="PFAM:PF00917" /db_xref="WormBase:CBN04844" /db_xref="WormBase:WBGene00143569" /translation="METPILAKDVPKDITPRPIMVQPMAGKAAKSASNPPTPLDSPFL SGATITRPRTSTRSMEVSIPIHVEGSTPIPPPATLAPTPANWVDCPFKEHGCHKKGEK NEVKRHVRDDRNLHLVLLCQSLNSVRTKINIQQSAYVDKYVDMLQYMNIAESSFEKYG SQHTFHIPKIGLAVVKATKSKSHRSIFSQPFYSHGYGYKMMAIAAPYGDGYAFREYFS VFVCLMKGEWDDILEWPFRCDVSFSILSDDKKELLTKTIYVNEMPEIQEFLERPEGLR NGTFGFQNFLPLAKVNEFAADGDIFIQIKVLLSHEKLFQAKEVDSTECQGDVIGGEKQ IGMVLKTKSE" gene complement(<208709..>213879) /locus_tag="CAEBREN_12731" /db_xref="WormBase:WBGene00151456" mRNA complement(join(<208709..208849,209550..209631, 209777..209907,210285..210407,210630..210948, 211772..211946,212879..213277,213771..>213879)) /locus_tag="CAEBREN_12731" /product="hypothetical protein" /db_xref="WormBase:CBN12731" /db_xref="WormBase:WBGene00151456" CDS complement(join(208709..208849,209550..209631, 209777..209907,210285..210407,210630..210948, 211772..211946,212879..213277,213771..213879)) /locus_tag="CAEBREN_12731" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding), IPR006029 (Neurotransmitter-gated ion-channel transmembrane domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54284.1" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR006202" /db_xref="WormBase:CBN12731" /db_xref="WormBase:WBGene00151456" /translation="MGPNEHGFAYILIFLLLSPTTQTNRDANRLFEDLIADYNKLVRP VSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHVSVFWRWTMSEKKFSKKILLS KNSKFPEMKINLHQNFQQKNSKSRQISTFFRAGWTTNYDGIRRNTVALKYYTSHRTPF GSLMLFSIINLQHRDKHLEKEIEEDVEGVDGPTKEIVWVVDRGIDLSDYYPSVEWDIL NVPGKRHSKRYPCCESPFIDITYEIHLRRKTLFYTVNLIFPSVGISFLTALVFYLPSD GGEKISLCISILISLTVFFLLLVEIIPSTSLVIPLIGKYLLFTMVLVTLSVVVTVVTL NVHYRSPTTHTMPKWMKRLFVDFLPKYLLMTRPQPPGHHSKPNRKFDPRASTFSIGVN HILGQNSELLSPGLNSNKEESSFTLPRDNSPVRSAVESVAYIADHLKNEEDDKQVIED WKYISVVMDRIFLITFTLACCFGTVVIIARAPSIYDNTPALA" assembly_gap 217339..217348 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<223576..>226409) /locus_tag="CAEBREN_22809" /db_xref="WormBase:WBGene00161534" mRNA complement(join(<223576..223908,223959..224087, 224782..226077,226121..226258,226308..>226409)) /locus_tag="CAEBREN_22809" /product="hypothetical protein" /db_xref="WormBase:CBN22809" /db_xref="WormBase:WBGene00161534" CDS complement(join(223576..223908,223959..224087, 224782..226077,226121..226258,226308..226409)) /locus_tag="CAEBREN_22809" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54300.1" /db_xref="WormBase:CBN22809" /db_xref="WormBase:WBGene00161534" /translation="MIGRIGLGRVLSRSLSTAEPAAVSQKLTIQPAIERSPTDLLNAL SETVGPDTTAPHFAYIDDPITIPSTQSAKKTYFMAKEFGKRAARELATEWPTLFAFDR DQPRLPAFRPQHLADPLQVAPTEKSLLAMIESREVQDSCILYERMRSENVEVSEKTQM ELFRLVTYYNSSNIPYSEWENWAGMRNYGEDGQSVWKSGAVADLLFETLPKTDESVSI MISGLCKYSDHGTLDRARQLYKEHRATNGKIYREAFNGLIGASSYSVAKKLAAEMASQ NISPDIHTFNSLFTAATKSGKFEERVKSITEIIGEMKELGVEPALSSYHIIVKNLIDS KLLDSEKRESDEQKNAYNRQLTLAVSWLNEILSGISGQNLVPVTSKCNLFFVEAMGIL YRASNEKLAEQLLSIYESKTNQVKMPEFTIQSMFYNRYLQLAIEQTASLNRIYDLYTS MVPRLVGVNNSLSSLVFRKITAASDRHWLLLRRVINDVIASGQLNGALGEEVRKQLCE VQLHTLGTSEREQFTALVQKLVAVWIEFSKFTEERMRRLQRKLSPSQISECALLLTRI GEQQKAYELLELLLDEDASSGEEATVYPRGHARPWAMAELFEDALRKRDTYGAATCLQ IMSLTANRAKLEPLANRILEKCNVNPDQKRILQGFVRLRPQ" gene <226665..>232562 /locus_tag="CAEBREN_07898" /db_xref="WormBase:WBGene00146623" mRNA join(<226665..226848,226900..227144,227197..227652, 227703..228940,228990..229561,229608..230038, 230089..230198,230242..230371,230481..231852, 231967..232050,232105..232452,232504..>232562) /locus_tag="CAEBREN_07898" /product="hypothetical protein" /db_xref="WormBase:CBN07898" /db_xref="WormBase:WBGene00146623" CDS join(226665..226848,226900..227144,227197..227652, 227703..228940,228990..229561,229608..230038, 230089..230198,230242..230371,230481..231852, 231967..232050,232105..232452,232504..232562) /locus_tag="CAEBREN_07898" /note="contains similarity to Pfam domain PF10278; contains similarity to Interpro domains IPR011989 (Armadillo-like helical), IPR019403 (Mediator complex, subunit Med19, metazoa)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54438.1" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR019403" /db_xref="PFAM:PF10278" /db_xref="WormBase:CBN07898" /db_xref="WormBase:WBGene00146623" /translation="MATESDAELAECISTPLRPLNDIDDAVATSSSDCNYENYEEFTG ATDMALFEEDYKDFLKELMKKTESILISGEKCDLRHVFEESGVASLKFNLFIWYFLEN GKRPDSTEEEVELGALAASCYIAMCALGGSRDDHYQIGLYNLCLKIARNCCTTVRIGE TVSSKKGGSKKKKSAPKPDETTADDDETEAARPSEAVIGPPRISVDSAEKYLGWLTTQ FFSFLRSNIFSLDPETQMNTFEFIEEVGRLELDARNAQRACRANSIREFRTLEKFADR YCAFVHVLIESKYPSRRDMAFGRLIRPRLALMPYPDETGAASKISTERKRAGDLTVSL ILARIARNPGPQELKLIETVLIMIYSQCPDLAEFRTNIAQFIHKILVALPYEYAYDFV QLMNVMFKGRTAGIKSLSNELANVLITSFNFSAPDPGPVPELAKESDSDVTEEEPEEG EEEAPAPQPDKDSEDEDDDSENDDDDDGNKSRRRREKKRKEEEERKRKKKEKKAAEVK DVERIDAVFVLYNIVYMACLDRAAAMRLHGSHSLAKILDSPTHRAKFQEFCQVANAKM DEKLGEVGAELEDSMDAMNITGEVTVRPAAKSKKQPTDMLLNDQNILEKWNRLKKINK GEERVEKDIIYMLVRKLATDDKVPVKKSSCVLLKLYLSFCDEQVKFETVLSIIQKLCR DRMVSVRKLSAEAFTELMLSENVHFKETLSSNWLNSMISMLNDTDSDVVEHARKLIMR VLAPLLENPTDLTWTLLDTIERTTNHRNYLMTTLRDAVREKLIQKSVMDSMRTRILER NQRTNGAWMVFSQLCVQYHQHVDFVIEEFNLVDITQESELVKYMTHAIENNINKIDAE EKENLICSLRSTLSEFTLHASHARSLYYCLGKLMDGIGERAQNGQEFRDFGESLIVKC FDTIVQSFEMFKDRDEWAHHAVHQERLLCTSLNVVTEVVTFSPQLIAKHERVGKTLSM IIASNDGTSFDASLINPDMPSGNFTRPQTRMSEAVSSQKTTNGMNKHEGILFGENVRA VGVITLSNMIVAYDRLLKTMPTLVKQLQYNPSHQIRSNIVVSIGDICASYKTDRYAPM LAASLCDPSVIVRRHAINQIARLISLGVFRFDGEIMIRMMMATLDANEDVRTDAKLYI SEVLQSEDPQFFEKNFVQYMIALTQARRRIGTSSHHHEEEARGGQIDVAIGGGQPLAR ASRIAIYTFMIESLNDRARFEVKCSICSRVFMAIINGEYDFKEHSVQCLLDDALLIMG SSEMQIKMEIGKDNNENVVDEPSPEQIAAAQDFMQQVYLQHYLNTIVPSVLALREFLN RHRSPLQRKCLLAIRMICLEHSRDIDKILQDNRQLKDEMTYELNRVKQRSEEAHRILN EAIQKVMEYNKRQKRQSMLPAEDAIPEEEPMEQAENVDVEMASPAKSTRSTAEIADES MRTPEKKRNPALDLLKTPGSALRSRTEERSTPQSRLLSPKTMKKIRRSVGALIQNDMC LNAPNLEETQVPDDQVLKRRNKTIEKEKTVVEEEDRMEHDGSPAKDDVPEEMPEEVPE EPVEKIAEEPMPVEQEQESEENTSRRRSRRRKTPNYQDESIDADGKVWKKPKIATKSP EKDVANISSNVTLRRSSRRGRPSTESNAPVVKKQQQKPRKRKASSDSDEEEQQVENTT PRDMTPLPLDESMLNGRNGRLCSTPIMERSTNNPSDMTFSLDMSAVTEKEELKNRKSA AYHLHNIFEEDEDEEN" gene complement(<232968..>236902) /locus_tag="CAEBREN_07378" /db_xref="WormBase:WBGene00146103" mRNA complement(join(<232968..233066,233116..233447, 233501..234905,234956..235429,235481..236572, 236620..236804,236851..>236902)) /locus_tag="CAEBREN_07378" /product="hypothetical protein" /db_xref="WormBase:CBN07378" /db_xref="WormBase:WBGene00146103" CDS complement(join(232968..233066,233116..233447, 233501..234905,234956..235429,235481..236572, 236620..236804,236851..236902)) /locus_tag="CAEBREN_07378" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54131.1" /db_xref="WormBase:CBN07378" /db_xref="WormBase:WBGene00146103" /translation="MEDNSVLNEDSSIDEAAAPPRKSMSQPSLAVIGEPSTPPSNSTP PKQSLSRSTSNVRSIPIIQTWHQNEELKGQIYSLRCEVQMHERKYLEAKEACHKSVSD VLDEYVMLKLEQEKYESMTSQVGSLERELEETRAKLENSEYNFAKQAEEFEREKLLME QRIRELEATTPVNDPNNTTYGSLRGTLDDIIKKNDPDFTLTSGYEEKKIRELEEKLLR EQDKVAELENHIKDLQDEIEDQSARLVQSENLRIQLETASGQGVLPVPNSTFIIGNAR ESQTEQHLKYIDELETKLTDAQNESEKARLALVEYMNRCSKLENENHKLKKNSEFDSS SILIGGKTSEELKAQIDKVNGQLNTLRAENRELRIRCDQLTGGDGNLSTSLGQTRLMA GISSTDLASASGAQENETGNTSIRMIPRESEFDVLDESKLPLMDTSAAVRNKTEFNTA YDEFESLKSQLQSNAHDTLESSFNGSMLPPDKDATQSFLSQKGGYKNSPLVVQKPKQL QQLLDIHQEESADQIQNNSFSTKNASPRSYNNPILQDMQHILDSSAILLEGQHDAAAN VEKMQEKMTKIREALSRLFERLKSSAALFEDILEKMGSSSPLAERIKQMKLAFETSIN DHADVSVILEAAEKDLNNMSLNFSILEKSILTQSFVADVSRRFTIAPDSEDVASSSLL NASYSPVFKFPGKSVAEIEKLQQEVSELKSELEKARTRDLRSPLQNTSQGRLSDVQIK ANQNFEELEVCQATLKRVETEKAALAQEHERLQATHHQILNQLEEIRAELDNALSRVE QEADARCYAEEALHEAKKTVNSLQQKFESHAHDVNSDLETRVAEACIKIEEEHRIVIE SLKQELATSLAEETAIREQMDEFRGEIERLRRRTREAEDKIEQGANEKQTLVEQIIAL EDQLDKASLFELQATDCASKMAAKKKELETAQRHEEIEKEAVEGLERIQKEVIELTKK TLKAQIIKGNASSIRVVCNEMCHRITREREQQHEASETMKVVNANIEEMVKENAELKK ELNQLATTTNNENAPPAEQKQPESSQNLTPGSSSKQKSSTFVSPTRALLHESTMAVDG IVQRLKKTHSMSGMSAELKNAIASIIMESRAVRDFLHQKLILFKGIDMTKWKNESVDQ LVEKLGQYHQDNLMLEEQIKKYKLELKQTKAVIPSLGLDVEERMKREIGGIAKDMGAV KALLNKKK" gene <238639..>244914 /locus_tag="CAEBREN_14572" /db_xref="WormBase:WBGene00153297" mRNA join(<238639..238720,238767..239071,239117..239892, 240346..240682,240731..240918,240966..241257, 241779..242102,242155..242276,242320..243717, 243763..244213,244585..>244914) /locus_tag="CAEBREN_14572" /product="hypothetical protein" /db_xref="WormBase:CBN14572" /db_xref="WormBase:WBGene00153297" CDS join(238639..238720,238767..239071,239117..239892, 240346..240682,240731..240918,240966..241257, 241779..242102,242155..242276,242320..243717, 243763..244213,244585..244914) /locus_tag="CAEBREN_14572" /note="contains similarity to Pfam domain PF11715; contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR021717 (Nucleoporin Nup120/160)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54193.1" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR021717" /db_xref="PFAM:PF11715" /db_xref="WormBase:CBN14572" /db_xref="WormBase:WBGene00153297" /translation="MELVYGSEISFSDGFAFKPARTFVVSTNAALHNNVCEAKPSGGV ATFPHSSNYADRIILWRAIGQKLYLEERSLLFSITDGSLCIDFTRTSIIPGTSIAIFD EGIMCIVVPTASAIHRFYARLPGKGRDTFSILARIKEDEEFRRFHTTHALTTPGRPIR ANVTHHPSRNTVSYVTSEGQLVVVSLASYTDPTERHEEFIIGEVGLLGKLLGGTDKRV ADACVMKNLRPTNGVSRERQVSAQSDIVFAVTRDGWVQAWNVETKKQLPCSIDLNKFF AADNKSFLRRGDAPEMEEEEDSSQPEPSELFYSIKAYTFDIDSLLIVGCDVLIGGKSV GMRVHLLKFSNDNIEHMQMFETIIGLDERLLDYELIQTYFPPDDVGELDATADDETYN PRTSALFSLTALLKSSSSKKSYSMKRLSFAIQWKTAEVFTEFDWHTVHQFNSASGFKG EPVAPNNEDEAENVPERPYNLSADSSTETLIDVVFNTDLYAFDIVFRAVQIVSDNFRG ALSQVRSNNWSDLSKLVDTYTTSVEFNRKFHQKTDRGIRLRLNAPQENVSSALRDFWW SLLRACEELDFAARGIISLSPMQISGDLKIMTVIHKDRMTIIGDNNTEFMDIISTENI PKPGYVEEKYRKLPNVQFVDLIEEASKFADRRVYLMNRERARSMSAKNGVPLVDEDGV ENAYDYDNDGRFINVKSALEQPIIKLTAAFVQASTFDNTKPFENPSQDIFGGTFAQSI VSANIRVTVESRVRFALTLQALLNAITEKKYRAGLAPEFGDVEALTCELREIIRVYRE LNEQLDIKILKNGAKMSVCTWLTSDNEGLIMMKREGGYGKDGYDEINECDFNWFVGVT TESAVRALLSTSEVLVLLRRLVVQKQYRVLLTILNSYISETRALKPVITFYRGIGYCG TDHPVKALNAFQSCMDAFNTGNVALRKAVFFLLPKRFHCEKGLDPIEQLTTAEYFLTV IRFLQEHGHAEEVCSVAMKAIETLPIENESVQLISNTLFNHLTNRREWFQALKLTLRT TLRSETRRASICELLTLMLASGEWEAIATMKFGVHEQVVEDFLREAACRQSPNEKRHY FELLFAFHLARKDFRGGACAMYEFARHIESATQMTPELLRKKRDVLAVVLNCQSVLGM EPEENQPVYDDWTDTNLVFPEPDEDEEFITETDYSAESTARRASRMMHDDKRVSDEGR ANVSSGSNGNSTDTSKESSSSGNSVDLATLKARQMAYALGSDNDDMDTDNTDSNAMTL RKRRKLLVLTEKDIRDEWVLCAARVSLLASGEFKGVPPTNLEDLFALLVDNLLFDNAF DIARQFKLDARKLYFVVVREAIMIDALRDDLDIERAGTHHAGWVRLNRRHCVSVSTAE DHWAVVKGLVNAALAEWPGDSRPLRGAAEAFLSYKLNVPFWLHDLYETKDANDYLRCL VDYEGYAVALQVLGEIVEQETLQLSQPNVRTWLPYGIIDELMIRSADYVRKMSVKTPE DQVAAAEVASLRKDADQKMLIYFRKLTDFEQAQKMASRFF" gene <245167..>247815 /locus_tag="CAEBREN_11013" /db_xref="WormBase:WBGene00149738" mRNA join(<245167..245622,246407..246585,246692..246835, 246916..246991,247039..247194,247531..>247815) /locus_tag="CAEBREN_11013" /product="hypothetical protein" /db_xref="WormBase:CBN11013" /db_xref="WormBase:WBGene00149738" CDS join(245167..245622,246407..246585,246692..246835, 246916..246991,247039..247194,247531..247815) /locus_tag="CAEBREN_11013" /note="contains similarity to Pfam domain PF01541; contains similarity to Interpro domains IPR001412 (Aminoacyl-tRNA synthetase, class I, conserved site), IPR000305 (Excinuclease ABC, C subunit, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54325.1" /db_xref="InterPro:IPR000305" /db_xref="InterPro:IPR001412" /db_xref="PFAM:PF01541" /db_xref="WormBase:CBN11013" /db_xref="WormBase:WBGene00149738" /translation="METFILSSDTDEDEGPPPAKRRSIEGVPKSFDNDRKMRFSFGVS NDSFNTTTIPEHSEIPTTPSGPSRIFSTSKTPVSLRRRSVSMSCMTPIVEAINEPPKN LACSSFVQNDREEDSDEEEEEGMEEKKMEEDLNLRALLSPEKNNKKRKEKIEEVQNEF YGVYCLISRSDRPCYKNRCYIGYTVDPNRRIMQHNGGRFKGGAKKTDSRGPWDMVCVV HGFPNHVAALRFEWAWQNPAVSKSLKEKQLKKERKETPFAYQLRIACELMNSEAFCRF ALTFRWLITKEELPFPSRCPPPDHVKLRYGKVKKEMSLVPAKADDYVKMGECRLCGED IEKLWSLVRCISATCHSHFHSKCLAAHGLKAKQEYSDHIFPLKANCPTCGHVYLWGDI VREQRRIMKVSTKCAEEFRTMVVRKDLPHREISPFPSKK" gene <249731..>252198 /locus_tag="CAEBREN_02137" /db_xref="WormBase:WBGene00140862" mRNA join(<249731..249895,251267..251332,251947..>252198) /locus_tag="CAEBREN_02137" /product="hypothetical protein" /db_xref="WormBase:CBN02137" /db_xref="WormBase:WBGene00140862" CDS join(249731..249895,251267..251332,251947..252198) /locus_tag="CAEBREN_02137" /note="contains similarity to Interpro domain IPR003417 (Core binding factor, beta subunit)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54206.1" /db_xref="InterPro:IPR003417" /db_xref="WormBase:CBN02137" /db_xref="WormBase:WBGene00140862" /translation="MKRTTTDQQTSFQTDYFLNQLSHFTEAKFSLFEHAPLNERRDRF RNHVEREEMPLTFCRMGINIPVKLEWYQTMGNEISFRSRPFVFNGIWVKVIGTMNSET LEGRVRFERFQRETKKSGVHVILNNNSTESVKIPEMEEEPIGMTDEEIRMLREEGLNI " gene complement(<254839..>260775) /locus_tag="CAEBREN_00430" /db_xref="WormBase:WBGene00139155" mRNA complement(join(<254839..254910,255178..255476, 255855..256440,256970..257513,257740..257832, 258751..259325,259896..260309,260650..>260775)) /locus_tag="CAEBREN_00430" /product="hypothetical protein" /db_xref="WormBase:CBN00430" /db_xref="WormBase:WBGene00139155" CDS complement(join(254839..254910,255178..255476, 255855..256440,256970..257513,257740..257832, 258751..259325,259896..260309,260650..260775)) /locus_tag="CAEBREN_00430" /note="contains similarity to Interpro domain IPR020003 (ATPase, alpha/beta subunit, nucleotide-binding domain, active site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54288.1" /db_xref="InterPro:IPR020003" /db_xref="WormBase:CBN00430" /db_xref="WormBase:WBGene00139155" /translation="MQPRYRGFPQFVQFDKKQIYFEKNKATLDSNENMENDRSSDKIT PKKEEDEPMPMSDDDDLLYVTANDQTAGGGAGQITINLERDMKRKITIITEPEQPKRP RRTGSVDLRRQAIMNSAIRSAQSASRSRSRSRSRNRSRSRGRSLTRARSTSGDGRRSR SRGRAQSIPVQRRVSKSPVKPLTPFIRLPTDLSNKSVIGKNATGPPSHIELPSPLFIL TEQQITGASEKKTVQFVTKILLTTQKLSLDERRNLYSEMVEAEYIGTSRSSTDLNKSA DDEPEEGYELKIYYSSKGVYIHSIQNVRKVRNGKQSKVSEEKTYSNICMTRIIGDHGK MSDGFLNITCSETISAVNQSYQRDENFKIGLKSCNVAGNVSIKSQKTTFDPTKTTNFY EAVTFDNKNVGIEVQHTATADMKEIWEHEMGSFGEEQSEYREIKFFFEDEKEEKKERT PGAAVTSVIQTPKASGSGSTSGSASKASGEGFGTTGAANTAAASGSASESTSSKSKSG SSSRRSRSRAKRHRAIKKASDSALRNNSPDRQSTRKETRPDQEPIKLNLMDVSNDSSM YYSFPRATSTPKSPGATSRRGAISIREHAEKHSDNEVDLDKSLSQKSKTPASKNLSQI VAERIEEARKKDAASMVSKPPLSPSVNSVNSESKNQNLTGTSVYLYNTKSSTPKSTHL MTAQDLREDRIRAHSTSPGGPALRNTTPSPQNILRVKETKVTREVRQEDGKPAEIQEK TEETVKEQKVKLEKTSPATPKMKQSFHQMTATNVVTLSALKETHQSLDVTPINVDAIT ESSSTGSSSTATASSSGQLAFKEDFQLDMLIDKKRFVLNVNFLFLGSKQPEVEIGAFS FRGQKLWEKSSEWPLSSANTTSHTKTLAVQASDIMEQQAKDGEEKK" gene <264641..>265159 /locus_tag="CAEBREN_09854" /db_xref="WormBase:WBGene00148579" mRNA join(<264641..264788,264885..>265159) /locus_tag="CAEBREN_09854" /product="hypothetical protein" /db_xref="WormBase:CBN09854" /db_xref="WormBase:WBGene00148579" CDS join(264641..264788,264885..265159) /locus_tag="CAEBREN_09854" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54435.1" /db_xref="WormBase:CBN09854" /db_xref="WormBase:WBGene00148579" /translation="MQATITTPVKTPTAVPRLAGAEQVEGVIRRPSFGRAIGAPIKMD PENRRAPDQIHGAPKAERSRRPSLDQALPPPPAAEAPRTPRRRSEQMRLRQRTPTASP IRGEGVVMEPHAPVRAYRTEPRELNMDNPRRSILDVKI" gene 267387..267458 /locus_tag="CAEBREN_27389" /pseudo /db_xref="WormBase:WBGene00188000" tRNA 267387..267458 /locus_tag="CAEBREN_27389" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN27389" /db_xref="WormBase:WBGene00188000" gene <272244..>275587 /locus_tag="CAEBREN_29777" /db_xref="WormBase:WBGene00191742" mRNA join(<272244..272453,273109..273502,274921..275054, 275414..>275587) /locus_tag="CAEBREN_29777" /product="hypothetical protein" /db_xref="WormBase:CBN29777" /db_xref="WormBase:WBGene00191742" CDS join(272244..272453,273109..273502,274921..275054, 275414..275587) /locus_tag="CAEBREN_29777" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54281.1" /db_xref="WormBase:CBN29777" /db_xref="WormBase:WBGene00191742" /translation="MDLSDDQIRALPHHDLVNYFLQMREEFNEFQSSSSEIEKMMDAE LDDLKAQLKRSDGKIQQLTTEQMRNKDRQDESRTQWCQVEEQLRRENGELREQCERQR ERIRKLEQRNDVLETSDRNKEYLASDLGTKLDSAIEKIAMLESELYERQVAAEEMHRL REEQLRTTTERPRLIVEPLRNDPEILPDEPSPGPSKEAFRMSIDDVYMEDVQHHHQNH HNDDVRMEETITKIDQVSIDDNKNIQEKQQQQRATSTGGAGACINRIVKDLMTKVERL DSILSTIRVTNSSNNNNANHHLTTTRA" gene complement(<276287..>288254) /locus_tag="CAEBREN_07722" /db_xref="WormBase:WBGene00146447" mRNA complement(join(<276287..276649,279110..279356, 279857..280137,280292..280383,282148..282658, 283362..283512,288109..>288254)) /locus_tag="CAEBREN_07722" /product="hypothetical protein" /db_xref="WormBase:CBN07722" /db_xref="WormBase:WBGene00146447" CDS complement(join(276287..276649,279110..279356, 279857..280137,280292..280383,282148..282658, 283362..283512,288109..288254)) /locus_tag="CAEBREN_07722" /note="contains similarity to Pfam domain PF04960; contains similarity to Interpro domains IPR015868 (Glutaminase, core), IPR007043 (Glutaminase), IPR020683 (Ankyrin repeat-containing domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54197.1" /db_xref="InterPro:IPR007043" /db_xref="InterPro:IPR015868" /db_xref="InterPro:IPR020683" /db_xref="PFAM:PF04960" /db_xref="WormBase:CBN07722" /db_xref="WormBase:WBGene00146447" /translation="MEDQDRMEVEEIENGEFGGEEIDGASSSSRDNDDGEKPRTPTVH FTKPSFYRVNTVTTSNVKVCRSMSYDMCGNHQQELLFDLYKDETTGKVYLPRFFKALL ESGIRKDDPRIDKMIQNIKDADLLDDFVWGSQHIYLEKDTFKKYIGSSIGVVTKALKK QMIIPDWERFAGDMGEIFEDVRRFNDGELATYIPQLSRVPPDSWAMSVCTIDGQRKSW GDSLKPFCLQSVSKPFTYALVHDDIGPEALHAHVGQEPSGRLFNDISLDHNKKPHNPL INAGAIVVASLLKNHSSLADRFDFMIHACRKFVGSGYIGFNNSVFLSERETADRNYAL SYYMREHNVFPKDLNLQDTLDLYFQICSIETNCDSLAVMAATLANGGVNPMNGERIVN NRACRDTLSLMYSCGMYDWSGQFAFHVGLPAKSGVSGDMIIVIPNVMGIALYSPRLDK LGNTVRGVKFAEQLVQKYNFHNYDSLIYSDNKKIDPRRQLKDDHDGQNRFMYATKLGD IAAIKRFILMGHDIHCKDYDNRTVLHVAAAEGDVVTLEYVLSKWQEDPDPHDRYERTP LDDAKHFNHTACIKLLEEAITVFNLKKQDD" assembly_gap 289051..289309 /estimated_length=259 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<292045..>297300) /locus_tag="CAEBREN_13084" /db_xref="WormBase:WBGene00151809" mRNA complement(join(<292045..292191,292336..292434, 292477..292611,293280..293510,293571..293778, 294328..294532,296153..296627,297256..>297300)) /locus_tag="CAEBREN_13084" /product="hypothetical protein" /db_xref="WormBase:CBN13084" /db_xref="WormBase:WBGene00151809" CDS complement(join(292045..292191,292336..292434, 292477..292611,293280..293510,293571..293778, 294328..294532,296153..296627,297256..297300)) /locus_tag="CAEBREN_13084" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54436.1" /db_xref="WormBase:CBN13084" /db_xref="WormBase:WBGene00151809" /translation="MGDHNTSISRSELEEQSSFESSTISWNDRVKDVRQTADRFRNFQ SEARGVKIQKQEDESMDPHISTSSIISSTKSKDRRVHWFDEVSEESEETFGLEMPSII SASEHLSEISDATIIQETGSMISENEGFPEMFGNLRRELLEQEKSEQEEQHHRMYTEE KIRRLKEELAALKPLPKPRKQTAWCKGKPHDAAKFPSRRIVEKIANRDQIRFKIDDID LSTLRPELLANMNEMELKHLITAFIESNPRLRYKENYPFVTEGMFQKDFRSNELKVFS SRLGLLRVPDTRSSSKDNKADYVYFMVLAPGIYRGFSFETHPPSLVSAKFPSEHETVI HGYAILAHPFGTRQLTQKEDCWICWNDSLGMMSVRSKAAMLAMKKQPIWDKQLDVVSI DVVYKNGFAVNKITALTNRKDKEKRFPEEVFIVEDAKYQEMRSNDYVFYSNTLNYEIL LERSRVGTAENHLPFEMVVAATFPRPDRLVFRCLLIIPEPAKFWNSTRQWIRDLLRAR TDAYRG" gene complement(<297672..>304224) /locus_tag="CAEBREN_25923" /db_xref="WormBase:WBGene00164648" mRNA complement(join(<297672..297818,298033..298137, 298356..298493,298540..298770,299214..299412, 299460..299644,300340..300918,301377..301517, 301558..301710,301762..301869,302536..303948, 303999..304087,304131..>304224)) /locus_tag="CAEBREN_25923" /product="hypothetical protein" /db_xref="WormBase:CBN25923" /db_xref="WormBase:WBGene00164648" CDS complement(join(297672..297818,298033..298137, 298356..298493,298540..298770,299214..299412, 299460..299644,300340..300918,301377..301517, 301558..301710,301762..301869,302536..303948, 303999..304087,304131..304224)) /locus_tag="CAEBREN_25923" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54106.1" /db_xref="WormBase:CBN25923" /db_xref="WormBase:WBGene00164648" /translation="MDDSDEEYMARADEFTRKLFADPKYLEEIRKAEVPEKKRRAHST KTGERGAPSTSELAPVKAPENGNEQQKPVLPINSSPSEETEKQSQDRPAEKRAAPIVP FRIRIPLEPYSSTQSSSSENVQKIVIPLKSPQKVPEKSSDDVAQKTTVVHLIKPTRLP IAQKDSLVTVVPMKPAQNQAPLNNPSRRTGSDNQKLPRVSEDQKCAKMTTVAPPIALN QAHSRQKTTIALPTPETSSTAQNHAPLNSPSRQSGTENRVASTCLLNLPKAPIDNQKL PRESVDHSKIEKCGVSSETCSIVLNQAQEVPEKPIRQPTSDDVAQKTTKVLPIKPIRL QITELYYDLPSNVMKPAQNQAPLNSPFRQRGSDNQKLPRVSELEKCGKMITVVPPVSS ESCSNAPVPLNSPSRQSDFDENIQSTSTPKDKQEASMELQKTFTKNQEVPQDRPTVAP PVKLPVAALVLPPKAKRPSEPTPRQTAVDNHVKSINTPNVLVDHQKNATAQQSSSRSI VPAVIQNSQREPAEIPQNRPVVQPEIVIPRIPKSSVNVPPPETRKKHPLDRLEASGKK QPAPQPAPRAPCVQKPLLRSMRNPERQEQPAPPPPPPRNPRIHHRPSDIIPVRVRQIT THGSQPVRASQPNRPPVVASSRSSETALGRHVPSRTNMMAVESRVMPILGTSSPVDDQ TTWVEEDVPSPVSPPITDNSPFDPNESILAASSSLVDPSIIEPLDPELHEYPPMFAAL TREFAERDRRDQENQRNQQHQEPRRTVSVLNLNGEVVHLNLNARPDNNTPDLSPYMMA NYRGSFDESVYRAPDIGEPRRELRTRLLPPIAKGKLSTNPVVRVTAAVVDPVGMGSVQ RQTNAHHHDFFEPAPLDIQPVRSSTPQSVESVESPSDESSYLSNLIPEDLMDKSEKEL LDITNQFYYSGPYQKFRRNYPFLAEGIVQKDCETGELKVYSQRVGKIMIEDTRKKRED DYVYFIVVSPGVYRGFSFYKHPNCLISAKFPKTDQIVLRGYAILAHPVGPREESMKDN QWVCWNDSLGVMSINKGSALIPFKKYPVWDKQLDIISFKAGFQNRKFVVEQVVVLTNL KEKQEHFPQEAFLVTDARWSGDGDVDLEFYSDTVKAPIYIRKMLVGTVDYTENQAFEL VVVPTFPGMTNPQFRGLLIISMPCMFWSKDKEWIRKRLVERAQAYRC" gene complement(<304668..>309551) /locus_tag="CAEBREN_00632" /db_xref="WormBase:WBGene00139357" mRNA complement(join(<304668..304814,304952..305194, 305242..305472,305520..305718,305764..308768, 308814..309029,309077..309259,309306..309406, 309458..>309551)) /locus_tag="CAEBREN_00632" /product="hypothetical protein" /db_xref="WormBase:CBN00632" /db_xref="WormBase:WBGene00139357" CDS complement(join(304668..304814,304952..305194, 305242..305472,305520..305718,305764..308768, 308814..309029,309077..309259,309306..309406, 309458..309551)) /locus_tag="CAEBREN_00632" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54180.1" /db_xref="WormBase:CBN00632" /db_xref="WormBase:WBGene00139357" /translation="MDDSDEEYLARAAVFTEKLILTLQNPVVESEAASQQPQQRPLIR TSVRVPKEKEVKSPSKQLVELQEPSPPSSKVQAAALNVPKSSENDAKFENPVPINKNE VRAPHRQLVPIGTDDKKSPEKRQEEAVAQKPPPARIPRVGFTRVLLPEARSKSTNPAP TKIAVRPSIPEHHRKSFGGTGESRPGSTTPQQRQEVELQETQKPQISENRSKSLNRIP ENHRKSFGGTVNYQKVPIEEIVASETKEPVSKEVELKTQKPSSTSIQVAESQVISKIR SRSTNHSVSASIVSKPTVLIPSQKTEDTENNVSKPSVPDQKIPKKSAECEEAVEPQLP VISAEQRSESANSAQRTESTVSSNNESPIPEVRTKSFGAVHQKTPRMPEGSDLKKTPP VEQIQAAEAQNSENRSKSANPAQRTESSVSVNNESTPAVPEVRTKSFGSVRIRQTFQE VEVVSAENQAAQRNENTVLVHQKTPRMSEGSNPKDISATRSIKIPPVEQVRAAEAQIS ENRSKSASSAQRTESFVSVNDESTPAVPEIRTNSFGSVRIRQTFQDSEVISTENRAAQ RNENSVLTNNKSRPAIPEVQTKFFGANSRTRQTFQDVTNLQTVPTKSEEIELKKDIPA TRSTKVEKTFGANTRTRNTFQEVVDWRIPTKLEGVLRKDMSATRSTKAENSVKNVPYQ EAPAKSDEIAAARSTRIDIFVSKDNSTKPLQTKPVITENRSNSVQKTENSVLASNASR PEIQTKSFGMEHILENTEESSATRPITSQQPGEHHQQTESNVPNVCVQQPLMRKSRPM ERRVRPILDIPTQIEPPLPPSTEPMPTFQQFLPEQQSPRFSPPVPSSSVPSFDIVNNF SRPRAAAVTRPPIPSFAEPLPIQRNIPNQQQPLRISPPVPSSFARPRENAVTRPPGPP NGFSRAVPRPNQNRPPPPTRPPNNRMNDEINQLCAGVSDLTIADPDFHLETRQRTRVQ QPNPMQPIVGSSAPVQDQTTWVEEQTNHRNQRFPINNNQYNPGESLFGSSEEEEDVND ITVEPINPAGEYPEMFTSFRRQLAEEENRSLRNHHVSFRDTSIVDLGRNNNEPERPPP SPIIRSNTPLMRRPPLLPPIAKGRIPERREVLPPISPISPLFGPPTNVPTTSNNMPAA SFDSADSAINKPTKEERNKTEHLESADAQYLTNLNPEDLVKMSEEELQQVTNSFYESG PRLKFKETFPFMAEGIVQKDCETGQLKVYSQRLGRIMLEDQRWKKTEDYVYFVAIKPG VNRGLWFDVHPKCLVSAKFPSVEKLVIRGYAILAHPNGSREDSIKESRWICWNDSLGL MQVISGAARIPLKKQPVWDKQLDIVSIHANFENRRFVVTKLVALTNSREKKDKFPDEV FLVQDAIFKRQCEDDLLFHSATLNAPILIKRTLVGEVHTFEQRAFELVVVPTFPRCNT LEFRSMLIIDNPQQFWKREKEWIRELLIKKAESYGN" gene <310026..>310946 /locus_tag="CAEBREN_00523" /db_xref="WormBase:WBGene00139248" mRNA join(<310026..310142,310213..310429,310474..310713, 310783..>310946) /locus_tag="CAEBREN_00523" /product="hypothetical protein" /db_xref="WormBase:CBN00523" /db_xref="WormBase:WBGene00139248" CDS join(310026..310142,310213..310429,310474..310713, 310783..310946) /locus_tag="CAEBREN_00523" /note="contains similarity to Pfam domain PF00595; contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54210.1" /db_xref="InterPro:IPR001478" /db_xref="PFAM:PF00595" /db_xref="WormBase:CBN00523" /db_xref="WormBase:WBGene00139248" /translation="MDHADSLSAVSTTSTTTSSSKYESPDDNLSDQQLLCETKEEYPL NDYLLEGVHQESAQRSLLLCRQNFDTSFGFALQSYVFKRTSSNSYERITYVDYVSTDS PADRCGIIRGDMVVAVNEKSVVTASHAEIVDSIAQCLQVSLVLVFKDVARIVELSMRS IQLRFMLDTKMQELKRLEEREKELLELLSDDHSELIEDEEIESTLYELDEELKNVQQA QEKETDYRHLIRINSSTSVGTPQVTRL" gene <311341..>314747 /locus_tag="CAEBREN_05183" /db_xref="WormBase:WBGene00143908" mRNA join(<311341..311661,311723..311805,313364..313490, 313541..313741,314561..314642,314689..>314747) /locus_tag="CAEBREN_05183" /product="hypothetical protein" /db_xref="WormBase:CBN05183" /db_xref="WormBase:WBGene00143908" CDS join(311341..311661,311723..311805,313364..313490, 313541..313741,314561..314642,314689..314747) /locus_tag="CAEBREN_05183" /note="contains similarity to Pfam domain PF07766; contains similarity to Interpro domain IPR011685 (LETM1-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54104.1" /db_xref="InterPro:IPR011685" /db_xref="PFAM:PF07766" /db_xref="WormBase:CBN05183" /db_xref="WormBase:WBGene00143908" /translation="MHSSLSRVLLLNSNRNLLNQPALLVAIRHTSAGPPPATPAKEGS LTYKYEKFIGKWPKVLALHRTVLEGSRWCFADVKMYFKTRRAVASGQKKMSDLTVEEL ETLVQSGGELFKMLTLIVILQIPGPGDILILMLIFFPRLVLTRHFWSDEQRREFFQLE VTKALISGEQLLNTFGSPSSADENKLKPLDKLDSSEMLLVHGMHSMYPLPGSKTRILK RMEALRALDNILPAAIDGFNERQLIFNCYIRKIDIGKKSSTEMRDSLRQYVKFTSRMP NNVYLYASPLFKQK" assembly_gap 312487..312591 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 317863..317872 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <319693..>323257 /locus_tag="CAEBREN_03206" /db_xref="WormBase:WBGene00141931" mRNA join(<319693..319953,320545..320774,323098..>323257) /locus_tag="CAEBREN_03206" /product="hypothetical protein" /db_xref="WormBase:CBN03206" /db_xref="WormBase:WBGene00141931" CDS join(319693..319953,320545..320774,323098..323257) /locus_tag="CAEBREN_03206" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR016181 (Acyl-CoA N-acyltransferase), IPR022610 (GCN5-related N-acetyltransferase, C-terminal), IPR013653 (FR47-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54121.1" /db_xref="InterPro:IPR013653" /db_xref="InterPro:IPR016181" /db_xref="InterPro:IPR022610" /db_xref="WormBase:CBN03206" /db_xref="WormBase:WBGene00141931" /translation="MSPSSSSVSPAAAVTTLADSFTLRKLQTWDRLAVETLCNESFPI QYPDCWYDEVVSGGLLSTGLFDGENLAAMIVSETKLLYDCNLEDQGIVQENVYVTYIL SIAVNKKFRRLGLATRLLNNLMSSLTDHPPYPRAVFLHVLSTNSAALSFYRIHGFEFH ASLPEYYRIGEVYADGCTYVKYINGSHAPVTFTDVCKSFGNTICMPLKAICKMLSF" gene complement(<323581..>327175) /locus_tag="CAEBREN_29221" /db_xref="WormBase:WBGene00191186" mRNA complement(join(<323581..323651,323708..323753, 324437..324949,326993..>327175)) /locus_tag="CAEBREN_29221" /product="hypothetical protein" /db_xref="WormBase:CBN29221" /db_xref="WormBase:WBGene00191186" CDS complement(join(323581..323651,323708..323753, 324437..324949,326993..327175)) /locus_tag="CAEBREN_29221" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54286.1" /db_xref="WormBase:CBN29221" /db_xref="WormBase:WBGene00191186" /translation="MDTTTTSAAAAAESKDNGRQSHSPEIDVDGLKSDCSSPEKLEKE QDVDVVDEEKEKMKKAEPTKTTLSPPNSRIRTTSSTSDGTENLIATLSSWDWVTIDGL KLPAVSRNKERYVAVHMVQLKLLSKFPSDIPRDITRKFTMGSHKMTVSEAWTFNSINA VIRKFDLGCQLFTANDELVKLNDVQMFYWNVKLFNLQRVNKDYEAAIKAAENNIQLLA TAMQLKKQVESDILAVRAELNRLEKSYIVSNMKMQEDTTPHTTTYKLIASKS" assembly_gap 325315..325324 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <328369..>335344 /locus_tag="CAEBREN_29532" /db_xref="WormBase:WBGene00191497" mRNA join(<328369..328613,329757..330136,330866..331053, 331507..332028,334014..334566,334731..334872, 335230..>335344) /locus_tag="CAEBREN_29532" /product="hypothetical protein" /db_xref="WormBase:CBN29532" /db_xref="WormBase:WBGene00191497" CDS join(328369..328613,329757..330136,330866..331053, 331507..332028,334014..334566,334731..334872, 335230..335344) /locus_tag="CAEBREN_29532" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR006594 (LisH dimerisation motif), IPR019781 (WD40 repeat, subgroup), IPR019825 (Legume lectin, beta chain, Mn/Ca-binding site), IPR001680 (WD40 repeat), IPR011042 (Six-bladed beta-propeller, TolB-like), IPR020472 (G-protein beta WD-40 repeat, region), IPR015943 (WD40/YVTN repeat-like-containing domain), IPR007582 (TFIID subunit, WD40-associated region)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54249.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR006594" /db_xref="InterPro:IPR007582" /db_xref="InterPro:IPR011042" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR019825" /db_xref="InterPro:IPR020472" /db_xref="WormBase:CBN29532" /db_xref="WormBase:WBGene00191497" /translation="MNPNDSDNSNSQFLDSPQMLVNGTGGPHPPGVDDLSAKPMNNES IQMVLGFLRRNGLTDTEEQLQREAAPVLRNDSSGLPPEEAISVEFDTFVQHANDCTDV VQAEFSQLLFPVFAHSFVALIEKHAPTARVFFNRFKIFIPECFSEFVYKLSLIEDAMT LRPNEYVNTLRSNKFLVRLSKPATKHLELIQTRLIGIKNIIAKHVSIEHADDGGGQMS RTMIETQMGGIIGVTSKHERRHKMLFSVVKDELMQMIEKRKTKGKDVVKRMQTAQHCP QHDRIPLPPFSEHQREERRSWLRDVGKMAIITPESPVSICMYTTVNAPIGVASCDFSD DSSLIVMGLSDSSIVMNAMDPMNKIKKLRDMDVLDKIDIETADNIQSQMFDLQASTTS VRLTGHGGPVFSVNFSPDRRLLLSSSGDKTIRLWSLESQSNVVIYRSPAMVWQAQFCN RGFYFATASNDKTVSMWSTDRMQPLRIFPDAYGDVCCIDYHPNCNYIAGGSDDRYIRV WDVLTGTRVRIFGGHKAAIIAVKFSPCGRYLVSLDAIGNLMVWDLAYQRLMAVEVTEQ SSGTKGHITFTRDGGVFAVSHGNANIQLYSLDALIGAVSAAGGHNDAFMEPKYVVLRV GFGIEYNLVIELSGRAFRIECAFKTIDGVWDPPKFVFADLAPYITRYLKTEISVNMEG LNIGTYPTKQTAVIGLHFTRRNLLLGFGCFGQ" assembly_gap 332758..333753 /estimated_length=996 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <335638..>344113 /locus_tag="CAEBREN_29090" /db_xref="WormBase:WBGene00191055" mRNA join(<335638..335678,336111..336189,336793..337503, 338512..338634,338929..339063,339734..340090, 340885..341093,341208..341503,342610..343028, 343814..>344113) /locus_tag="CAEBREN_29090" /product="hypothetical protein" /db_xref="WormBase:CBN29090" /db_xref="WormBase:WBGene00191055" CDS join(335638..335678,336111..336189,336793..337503, 338512..338634,338929..339063,339734..340090, 340885..341093,341208..341503,342610..343028, 343814..344113) /locus_tag="CAEBREN_29090" /note="contains similarity to Pfam domain PF01602; contains similarity to Interpro domains IPR011989 (Armadillo-like helical), IPR002553 (Clathrin/coatomer adaptor, adaptin-like, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54260.1" /db_xref="InterPro:IPR002553" /db_xref="InterPro:IPR011989" /db_xref="PFAM:PF01602" /db_xref="WormBase:CBN29090" /db_xref="WormBase:WBGene00191055" /translation="MEIAEGGVILDNRTRFADLKAMLDSNKDNLKVDAMKRIINLIAK GKDVSELFAAVVKNVAAKNVELKKLVFVYLVRYAEEQQDLALLSISTFQRALKDPNQL IRGSALRVLTSIRVPMVAPIMLLAIKDAVRDMSPYVRKVAAHAIPKLYSLEPELEPQL VDCIDFLLADRRSLVLGSAVYAFDEICPHRLDLLHKHFRALCRGLADVDEWGQIVMIN MLTRYSRHELADPDKSPPDTDIVLLLNSARPLLQSRNCSVVMAVVQLFYHVAPKAQLS QIARALVRLLRGPRETQYVVLTNIATICEQNPVEEGTYAISKTMFDPFLKSFFVRSCD SSLVKQLKLHVLTSLVSEANVHIILRELQTYVHMSDLASPAVEAIGRCAVRVGAVSDQ CMTGLVQLISSSDEKVVCSAVVVIKRLLHASAPLNLLSRLMRLMPKMVAAQARACVIW LVGTHVDQVMHMAPDFLRLIAKKFSTESELVKLEALKLAVKLWLVKRDDSEKIVQYVF QLARFDLSYDVRDRCRFLRNLMFNTEILSQHMEEIFMSKKPAPDDPLLRKEAHAPTEL KLDDSEEEEEDEEEDEDEEEEDESEEDGDEEEDEEGSEGSEEEDEDEEEDEEESDEEE EEEDSEEEEKPRKPQVVKKQQVEVKPKITNGKPKESNALDLLIDVDFSAAGSRQIMDP SFIDEKEIQILNVIEGNGIELSISYPRLNDGQYTPIRFGITNKTDGELEGIELKSEES LDIKGTSRIESLPPGARVSIDLLIDFGDSLTKREWILTRDDGNEKRFRFEVPYGEQVQ PIRLSPDDISKERNRLGGLNRHVIQLESPVSASSIPQFVNCFSADQTVFTCQTRSRKD VCILTLTDNQSIECCCDNSVIGRMLAFAVSKNC" gene complement(<344537..>346388) /locus_tag="CAEBREN_24471" /db_xref="WormBase:WBGene00163196" mRNA complement(join(<344537..345332,346285..>346388)) /locus_tag="CAEBREN_24471" /product="hypothetical protein" /db_xref="WormBase:CBN24471" /db_xref="WormBase:WBGene00163196" CDS complement(join(344537..345332,346285..346388)) /locus_tag="CAEBREN_24471" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54444.1" /db_xref="WormBase:CBN24471" /db_xref="WormBase:WBGene00163196" /translation="MSTPATPTFSDFFDFFALPCLLREQIFANMCPSALVSLYQTFRN AHTFFPFFNGKMCIKYSLESPKIQVIGSNGKQSILPFTAHKTLSKVYSHLQLVNLSVE INEDSRPENYKDLLKFIGRWLDRNVKTVRVFSKDGNVLDLGSIGGLFDIFESVKVIKY SNRISNFFQSIKVQVVDISNGSHLNTKDIRRVCRKAEEVRISSSRFSDSKFNDIIWDW LNGRNKCLRYLEITSRRTRRPQGLRVLMEEIPFTSGQGGAFEAKFLKVKTIFHTGFDI ERRDGRRATVVRSAKKFKLNVWD" gene complement(<348705..>354744) /locus_tag="CAEBREN_20187" /db_xref="WormBase:WBGene00158912" mRNA complement(join(<348705..348846,349128..349234, 349335..349473,349525..349631,350064..350987, 351348..351619,351699..352024,352519..352882, 353223..353861,354230..354387,354433..354606, 354650..>354744)) /locus_tag="CAEBREN_20187" /product="hypothetical protein" /db_xref="WormBase:CBN20187" /db_xref="WormBase:WBGene00158912" CDS complement(join(348705..348846,349128..349234, 349335..349473,349525..349631,350064..350987, 351348..351619,351699..352024,352519..352882, 353223..353861,354230..354387,354433..354606, 354650..354744)) /locus_tag="CAEBREN_20187" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR006935 (Restriction endonuclease, type I, R subunit/Type III, Res subunit), IPR003593 (ATPase, AAA+ type, core), IPR021673 (C-terminal domain of RIG-I), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54405.1" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR006935" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR021673" /db_xref="WormBase:CBN20187" /db_xref="WormBase:WBGene00158912" /translation="MHEPSCYEEEDISRQSLPFGSPYFPAYFRLLKWKILDVCVSTMK FKDIGDFALFEDCFPPGKLEEVVKKITGEAEPFTQDPEFKKLKETEVDPKFKRHAETY LKLRHDHKTKVERRRFAEYFLNKILFNEQGLRIADKLIWQHSRQVYGTAHWKDLPKDW MTTDTYKKKFYDEEELERDPYGMQRLDRVAGSARGMLIMKHLESDHLVRKEYDVLKKE VSDPENLCQTELVRNLLDEGPLWELKMEEGEEIIRKADKWNVHKTLVIFFYITGFRAK SEKEQEEWFYCLMDAMKNDPTNRAALHFLNKNYAEELDERQKERNRRRLQEFKGLKVD EKGVGNTIVTNIRPQKNETAYNPDADETNLVLRVYQEELVQPALEGKNCVIVGPTGCG KTEVAIYAALNHLRERQAAGQTGRVAMLVPKIPLVTQQKERFLQYCRGSFTVNGFFGS EKSDSGEGRKDDVIESHIVVMTPQILINMLQSVRVNERLYVADFSMMIFDEVHKATGN HPYVIINQIVQEWEHDKPQIIGLTASLNVSSTAQKDLSQMLFSIHTMLALLNAPYLST IKLQASIDELNKHVSKPDDSVEVCQPTATALRNYIETYLGTAHIKLCHELESLSKLRH NCFPSNSYRRFKKLSPKFYEIYESNLQNINQDLKKLNTAEKTIAVTWMKYIRLYVEAR GMVDLMPARLVFEFMEARIRELDTGHKLGDQFSDFFKKYSGLEANAKSDEPMIVTKLK DTLITQFKVTPDSRVIIFVTQRATAQRISDFLNKSHIMDQFRDPDDDGYDEMVGFVLG TNNQGGAVQQSQQEQQKVLSRFNNGKMKVIVATSVVEEGLDVTSCNLIIKYNCSSGSA IQLVQRRGRARAKNSRSVLLAVNTKVNEDENNALISEKFMRMCVKKIEEAGPKQLEID VAAAAKKIAIERKNELTAQLELRERFANSLYKLNCVGCSTTFCMSSDIKKVYSNYMAF DPAAWQFFTVESKKKKPNSYLSEDTQPLSILKCAKCVTTVIGKAYKMRGVYLPQIDVK SVFFVEENSSESKTAKKWSSVEQELFYVGEATQDNFEDMLNALSNNECNMDKKRLLDL DSKQHIRDIELKKYRIRNEEQEKAKAERMKKAEQEGVEFEEGEEPEPEREGATAFSED ES" gene complement(<355812..>356718) /locus_tag="CAEBREN_11861" /db_xref="WormBase:WBGene00150586" mRNA complement(join(<355812..355858,356118..>356718)) /locus_tag="CAEBREN_11861" /product="hypothetical protein" /db_xref="WormBase:CBN11861" /db_xref="WormBase:WBGene00150586" CDS complement(join(355812..355858,356118..356718)) /locus_tag="CAEBREN_11861" /note="contains similarity to Interpro domain IPR002395 (HMW kininogen)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54276.1" /db_xref="InterPro:IPR002395" /db_xref="WormBase:CBN11861" /db_xref="WormBase:WBGene00150586" /translation="MVGQFPRDHRNTYSEGSPNAQYKSHQLTKSDYDNIQQYISDLKN TDRPCSSIPPEIWHSLPADIKQEIIKARNSRPQRKKDDTSYRKEAGKTRTNSMSHGHN ERHSMSHGHNERHSMSHGHNERHSMSHGHNERHSMSHGHNERSSYNGRPPRQPRIFVD SDPNDPLSDDAFTQQYEPDYWARLPKRVRYEIERQRFVKKERAMKAAANQSSTLN" gene complement(<357556..>362290) /locus_tag="CAEBREN_25995" /db_xref="WormBase:WBGene00164720" mRNA complement(join(<357556..357561,357607..358284, 358330..358424,358872..359174,359221..360517, 361204..361373,361418..361520,361566..362085, 362133..>362290)) /locus_tag="CAEBREN_25995" /product="hypothetical protein" /db_xref="WormBase:CBN25995" /db_xref="WormBase:WBGene00164720" CDS complement(join(357556..357561,357607..358284, 358330..358424,358872..359174,359221..360517, 361204..361373,361418..361520,361566..362085, 362133..362290)) /locus_tag="CAEBREN_25995" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54109.1" /db_xref="WormBase:CBN25995" /db_xref="WormBase:WBGene00164720" /translation="MGNNKKHQKKKTQANKAQHARRSEPPSPITKEPSESVPTTLEMV SNPPVSTEKANEIHEEPVVVAADPVETVVDKVEETTAPLVTPEKLEEESAAAAVVVDE KCPEEPEKPAEEVKDEGPKIVMEEEEPKQEEKEDKEGETEEKVEELKVVEPVEKEEKV VEESEEKVQDEQKKDEEEHKKEELEEESGSQTEEDNGRKRKDSSQTDTTVQAEEPEVF TDYTWEKTDEEVNIKQAIFVKSYNYKFAVFLRVIDPEFRFVAGIGPSSKLDPEENVKV FDPEGVSAIFERMKKEGFSNPCPFQNENFKASFEEIRLFLSEVLTKIKFCLRLACAER GYEYKSGKFTNQPISAVWGVELDPMLELKTIKAIMDEVKEPITKMLTEEGQETRFWTE FKTIYEEVLPALEAYDSKTLADNNISDCMATIHGRQELGFEITEEEVDRMLEQSFTED GFGEFPSTALYAPTLFTSSKQLKLIYVQLEKMSKVTDIRVKLAGIQTITRIIHSIDQD ESIRLMEEFEDHPKLPVEKMFGLNPLEFSVNTNEPKRAQYLKIFYTALGETNPKEDTE MTLEQLQSVFKCFYMVFPAFEINMILFKILGTHIKDCAWIDADRKQLVRALFSLPEPL RKRLEIGQEYETGEITDDTNSMYYQVKNFIRLAKRDFIGLLVCFLYVGDGSRRLISAE RVMRQAMRFIEAGTAQVMAVETLKTLLRPSMSDLSFSKEFFEDLIVLALSKYSVPDAK CIEKKYAFMTIVFDIVNSYKENHVLEIDSKKIAEKWTDMAHPWFSVLFLAHKFPILKD SIPAGSYPWLSADVWTDDENHQNHLKNYIPLAKVPTAWPKCTNLSSVVALVNDHVPIK ISRKDLYAHMIDYVRAGDVFTEPQKTGLLNELMGKVVSLTASETAKKPKEPSSDKKSK DKRKKSPAEKLEIKKTPEVASEKAAEKLVKEAKETQTSPMPQVEKPEKPEKPETPVEA VEEEPEVIDLVEEEDSEDVKEEKEKEEKEDEAQKWEFVQMAEVKKEVEDPEEDQNPEK LDTPEPGKEATVETVVSQEVPVKVEPETTPDTDTLKPLKELDADVFYGWYEPEEWEPL PEIIVNEIYRQRAAKGYSNKL" gene <362752..>363259 /locus_tag="CAEBREN_22450" /db_xref="WormBase:WBGene00161175" mRNA join(<362752..362793,362843..362911,362965..363062, 363115..>363259) /locus_tag="CAEBREN_22450" /product="hypothetical protein" /db_xref="WormBase:CBN22450" /db_xref="WormBase:WBGene00161175" CDS join(362752..362793,362843..362911,362965..363062, 363115..363259) /locus_tag="CAEBREN_22450" /note="contains similarity to Interpro domain IPR002836 (DNA-binding TFAR19-related protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54108.1" /db_xref="InterPro:IPR002836" /db_xref="WormBase:CBN22450" /db_xref="WormBase:WBGene00161175" /translation="MEDQGASTIPQQSQDAQNKARQQAENQESAKNSMISQILDQAAM QRLSNLAVAKPEKAQMVEAALINMARRGQLSGKMSDDGLKALMERVSAQTQKTTAVKF DRRRNELDSDEELDL" gene <372205..>373147 /locus_tag="CAEBREN_22032" /db_xref="WormBase:WBGene00160757" mRNA join(<372205..372399,372842..373013,373062..>373147) /locus_tag="CAEBREN_22032" /product="hypothetical protein" /db_xref="WormBase:CBN22032" /db_xref="WormBase:WBGene00160757" CDS join(372205..372399,372842..373013,373062..373147) /locus_tag="CAEBREN_22032" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54175.1" /db_xref="WormBase:CBN22032" /db_xref="WormBase:WBGene00160757" /translation="MRRQPSQTDYPRVTTAEDAAARRERTVADALAKVGTAPEPKLTP SEIRARASETKTRFYCPIQRQANPPRDTFAHTTFERKGTVEPITPDQSVHTTPTHMPV LKMETLFFGRSHADIDRCCADAPRRVSTHEALERLDELTKTLNDTVII" gene <376693..>379203 /locus_tag="CAEBREN_29270" /db_xref="WormBase:WBGene00191235" mRNA <376693..>379203 /locus_tag="CAEBREN_29270" /product="hypothetical protein" /db_xref="WormBase:CBN29270" /db_xref="WormBase:WBGene00191235" CDS 376693..379203 /locus_tag="CAEBREN_29270" /note="contains similarity to Pfam domain PF03564; contains similarity to Interpro domain IPR005312 (Protein of unknown function DUF1759)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54251.1" /db_xref="InterPro:IPR005312" /db_xref="PFAM:PF03564" /db_xref="WormBase:CBN29270" /db_xref="WormBase:WBGene00191235" /translation="MVLHRHPRSRSSSRDSHDSQASSLGRQPNRHPQRDRRSVSKTNL RTAVVGPVKRHVNRVTKRAGELIKAARSAISTLQVLTPEQDGFQTYLEKTDELLVSIK RYAHRLSSLHNYVASRFDNPLMEASPERQQFLKEVRDKIVKSKAEILHKELQIIGGTI ESQLISLKFQCSQYIPSDGLVSDEEETTGKSLTNAPRLFANARSIPAQEATVTQSEAG GLNPANAPSATGTGIELGTSSSVAETPILPMASRTYPERANQFESALESSSHQKDMEI QNLKAKLEEERNRRRDVEFLAAKTEKDYFESYKRLQDTCLSDRATFAQARAEAAQSTT VTAHTQPEAAPAAHTQPNVPSPPVDSVPNENGAAGHTQQPSPHSFEDAIKMMHQEKLK ADASITAAMEKLTSFMSDWRRDQEEERYADEYEKHAQGDGDDGHTHTPPPAPKTAETP KKVPVPFDAQYYRRFDATRHLSDYDGSGDLDVFQSTFERVIMEDETFSDSDRYLLLRN TLKGKAAKCLTHADEPHTAIRKTFTALARAFGHSQTENYLLGKLTKLPFHQYDPKQMR LDLVNITVVIERLKQKGIPENDKRTIWDIAAKLPPAIQSDVTDYLAEHEDTVTHDSLV DVIFARIKALDMRTMIRDQGSQNASNEIPDSYGFINHVNASHSASAQAGSSYTRRPAP KTESFRSKGQRPLTYNADALPVEYVDPVTRQILPGYYTPGPRGAHVATLKRTFPSLTP EFIKCQACDGPHNAMRCNLTSTEFKEKLKEKDLCPICLGKHAITECRSSHKCGYCDGL HHMGACPKKEFYRIPANLPQGVKGRDTFFRGPQGHSSQ" gene 383598..383669 /locus_tag="CAEBREN_26856" /pseudo /db_xref="WormBase:WBGene00187467" tRNA 383598..383669 /locus_tag="CAEBREN_26856" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN26856" /db_xref="WormBase:WBGene00187467" gene 384299..384369 /locus_tag="CAEBREN_27456" /pseudo /db_xref="WormBase:WBGene00188067" tRNA 384299..384369 /locus_tag="CAEBREN_27456" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN27456" /db_xref="WormBase:WBGene00188067" gene 385616..385687 /locus_tag="CAEBREN_26938" /pseudo /db_xref="WormBase:WBGene00187549" tRNA 385616..385687 /locus_tag="CAEBREN_26938" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN26938" /db_xref="WormBase:WBGene00187549" gene <388464..>389689 /locus_tag="CAEBREN_02140" /db_xref="WormBase:WBGene00140865" mRNA join(<388464..388514,388567..388628,389230..389528, 389589..>389689) /locus_tag="CAEBREN_02140" /product="hypothetical protein" /db_xref="WormBase:CBN02140" /db_xref="WormBase:WBGene00140865" CDS join(388464..388514,388567..388628,389230..389528, 389589..389689) /locus_tag="CAEBREN_02140" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54376.1" /db_xref="WormBase:CBN02140" /db_xref="WormBase:WBGene00140865" /translation="MSQKLLPISPLQLLLLQCLLIGYAMAYPYLIVPSSPSGDSRRLV KRAFDRFDNSGVFSFGAKRFDRYDDENPYGYVYDSHIFKRSADPYRFMTVPTKKAFDR MDTNDFFGAKRKRSFDRMGGTEFGLMKRSGGTENREQLIDNLTESIIALRRARETEGG SQPVVVSYED" gene <400529..>414262 /locus_tag="CAEBREN_01761" /db_xref="WormBase:WBGene00140486" mRNA join(<400529..400561,401330..401398,407664..407760, 409908..410425,411641..411793,411840..412031, 413987..414124,414185..>414262) /locus_tag="CAEBREN_01761" /product="hypothetical protein" /db_xref="WormBase:CBN01761" /db_xref="WormBase:WBGene00140486" CDS join(400529..400561,401330..401398,407664..407760, 409908..410425,411641..411793,411840..412031, 413987..414124,414185..414262) /locus_tag="CAEBREN_01761" /note="contains similarity to Pfam domain PF01284; contains similarity to Interpro domain IPR021128 (MARVEL-like domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54101.1" /db_xref="InterPro:IPR021128" /db_xref="PFAM:PF01284" /db_xref="WormBase:CBN01761" /db_xref="WormBase:WBGene00140486" /translation="MEYPYGAGTVKIIPASAFRDVSLYQQHFPYDYGQEPLGHPINGA YYMGGVYNPAYLHEPYGQNGYIDPTYGDTGQQHQPSHQYPYYGYPNYSHYNYQQSSAY PGAYGPYPGASGAYRPYPQPAPSPPRRSRTAPSRPRSTAPTMGTLGAESRRGHQQQRG VSAEAFDRRQYKAYTGGPAKKPLPMYRKKREPPMVGRYQETDFGGGGGGGMGGMDDRF TPYNRNYYGEVGAGGGGAHRSQQQQTMTLRRLRPFYAPSYTTYPPSTMHPKNALNNRN YPLYARLAAKAVQVILGVAVIGLVLGPMKGNSFHDFVIRTNTEWQGLVLGISVSFSFF SLVLGITSCFASNLHIWKKVDGLLTAAGCFFWLVAGFVEAYFAACYPPNGPRINLVCH RPEWIIACVLAFINFLVFVADFVLSWMNGASML" gene complement(<418732..>419406) /locus_tag="CAEBREN_18762" /db_xref="WormBase:WBGene00157487" mRNA complement(join(<418732..418843,418889..>419406)) /locus_tag="CAEBREN_18762" /product="hypothetical protein" /db_xref="WormBase:CBN18762" /db_xref="WormBase:WBGene00157487" CDS complement(join(418732..418843,418889..419406)) /locus_tag="CAEBREN_18762" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54349.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN18762" /db_xref="WormBase:WBGene00157487" /translation="MDDFVDIFHVRSVDMYMIFVNISATCVQYLEYALSLGLKIKSFS VSDQRYPVQDLRKILLACAHISSLTVYMSDPPKASVLDCFQEFAVDNLELDVTPGCIT LDHLFALVNCSKVNIAQVRFDEADLNKFLKYWLSGTSRLRTMAIQLTSGYRGGNYLNA QFVMEGIDGREIERNKKFEIERSDRVKTIVSIYNIAITLGDFDRNDLEY" gene complement(<420708..>420966) /locus_tag="CAEBREN_04251" /db_xref="WormBase:WBGene00142976" mRNA complement(join(<420708..420810,420863..>420966)) /locus_tag="CAEBREN_04251" /product="hypothetical protein" /db_xref="WormBase:CBN04251" /db_xref="WormBase:WBGene00142976" CDS complement(join(420708..420810,420863..420966)) /locus_tag="CAEBREN_04251" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54333.1" /db_xref="WormBase:CBN04251" /db_xref="WormBase:WBGene00142976" /translation="MKTLVVDLAYPEDIMNIEVINPQTVLNGIPRKEIESADNGSKFE IERSDGVKAYVTCGCLSFTMELST" assembly_gap 421930..422476 /estimated_length=547 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<422863..>423930) /locus_tag="CAEBREN_14897" /db_xref="WormBase:WBGene00153622" mRNA complement(join(<422863..422974,423020..423802, 423857..>423930)) /locus_tag="CAEBREN_14897" /product="hypothetical protein" /db_xref="WormBase:CBN14897" /db_xref="WormBase:WBGene00153622" CDS complement(join(422863..422974,423020..423802, 423857..423930)) /locus_tag="CAEBREN_14897" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54409.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN14897" /db_xref="WormBase:WBGene00153622" /translation="MTFPFRRLPFLTIVNVIQNIDVEDFINFIQMSTKMRTLVKLSKV HILLNVFSNARIGFEKLSDPGRNKQVEFFLKPNSMKKQKKISFEPFVCRKSMYRCEEN FEEYRRIMDDFVDIFIVSSASFDMRSTPSDISVQCLEYALSLGLTFKKVQLLISKEHS MDCCQKVLSICARASELSIHLLDYSEEFYLLDRFREYKINVFELTITRNFEWFTVDHL LALINCTNVRIYDVNLSDADFNKFLKHWVTGVGKMETLCVGLESSEGREENLINADDV MDGIPRREILQDEKFEVEGPNGIKANVWCFGLRFSIGDIDLETLLN" assembly_gap 424310..429007 /estimated_length=4698 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <433226..>437176 /locus_tag="CAEBREN_10549" /db_xref="WormBase:WBGene00149274" mRNA join(<433226..433261,433313..433417,435253..436418, 436469..436775,436826..>437176) /locus_tag="CAEBREN_10549" /product="hypothetical protein" /db_xref="WormBase:CBN10549" /db_xref="WormBase:WBGene00149274" CDS join(433226..433261,433313..433417,435253..436418, 436469..436775,436826..437176) /locus_tag="CAEBREN_10549" /note="contains similarity to Interpro domains IPR013035 (Phosphoenolpyruvate carboxykinase, C-terminal), IPR018091 (Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site), IPR008210 (Phosphoenolpyruvate carboxykinase, N-terminal), IPR008209 (Phosphoenolpyruvate carboxykinase, GTP-utilising)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54227.1" /db_xref="InterPro:IPR008209" /db_xref="InterPro:IPR008210" /db_xref="InterPro:IPR013035" /db_xref="InterPro:IPR018091" /db_xref="WormBase:CBN10549" /db_xref="WormBase:WBGene00149274" /translation="MSVDPNLLTPYKNTGAANASLRQISEDAFYVVNEVVMKRLGHVP ILKGDFHLLPAKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAY ENNYICRTDPKDVARVESKTWMVTKNKYDTVTHTKEGVEPIMGHWLAPEDLATELDSR FPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIMTRVNNSVWDALGNQ DFVRCIHSVGLPRPVKQRVINHWPCNPERVLIAHRPPEREIWSFGSGYGGNSLLGKKC FALRIASNIAKDEGWMAEHMLIMGVTRPCGREHFIAAAFPSACGKTNLAMLEPTLPGW KVRCVGDDIAWMKFGEDGRLYAINPEAGFFGVAPGTSNKTNPMAVATFQKNSIFTNVA ETANGEYYWEGLEDEIKDKNVEITTWLGEKWHIGDPGVAAHPNSRFAAPANQCPIIHP DWESPQGVPIEAIIFGGRRPQGVPLIYETNSWEHGVFTGSCLKSEATAAAEFTGKTVM HDPMAMRPFMGYNFGKYLQHWLDLKTDARKMPKIYHVNWFRRDANNKFLWPGYGDNIR VIDWIIRRLDGETDIGVETPIGTVPAKGSINLEGLGDINWDELMSVPADYWKQDAQEI RKFLEEQVGEDLPAPVRAEMDAQEKRVQSL" gene complement(<437534..>445792) /locus_tag="CAEBREN_13657" /db_xref="WormBase:WBGene00152382" mRNA complement(join(<437534..437654,438776..439028, 439093..439221,440021..440215,440271..440360, 441916..442450,443532..443815,444627..444721, 444813..444952,445622..>445792)) /locus_tag="CAEBREN_13657" /product="hypothetical protein" /db_xref="WormBase:CBN13657" /db_xref="WormBase:WBGene00152382" CDS complement(join(437534..437654,438776..439028, 439093..439221,440021..440215,440271..440360, 441916..442450,443532..443815,444627..444721, 444813..444952,445622..445792)) /locus_tag="CAEBREN_13657" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003146 (Proteinase inhibitor, carboxypeptidase propeptide), IPR000834 (Peptidase M14, carboxypeptidase A), IPR003582 (Metridin-like ShK toxin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54387.1" /db_xref="InterPro:IPR000834" /db_xref="InterPro:IPR003146" /db_xref="InterPro:IPR003582" /db_xref="WormBase:CBN13657" /db_xref="WormBase:WBGene00152382" /translation="MRYLCRSSILLLAVHTILLVCFTTAEEEKYALLHVSAHDAQSLH LIKQLQLNDYKYDLDFWKSPSSISDKADIMVKRGKPERMLRQILSFANVTVAMSVPDV EKLIMRNEGTTSKSRLGGVFSKWLHDDPILDSEPDLDLTKVGTLKKAKYPFGDYASYA DMVKYMRTIEFYYPRIAKIVRIGATHEGKPIEGLKIGARSTHKKRAVWVDGNIHAREW ASSHTALYFINQLISGYGTDPQITNYVDTLDFYIVPCLNPDGYEYTRSSPIPSVRLWR KNRSPEVCRPSLWGGEKCCQGVDLNRNFRFHWAERGSSYEPCSNIYHGEEVFSEPETK AIRNFLGNSEMKDRVDAFVTLHSYAQLWIYPYSHEEQNYPEDIGELRKTARKAINRLS RVYGTNYRMGTGADTLSPAAGGSDDWAKSALNVKYVYLIELRPQMELSNGFILHKKEL IPTAVETFEGFREVVDAVLVLNNSTSSTPGAASGNNPGATRKTISDLQMRKQQYRMRL LASQAARDTTRRTQTSRSTTTTTTTKSTTTSELTTTSEAKPSRHFDRFTADPNSSTRA RPTPPMAPPMMSSLSTTEFSTSTEDIVGDDVITTSSIAGRATTRFGFYTATKPSAFLD PECRDMRYSCGFWLKNNKQVCDEQQSFMRAQCAYTCKFCTSFIKRH" gene <458844..>461818 /locus_tag="CAEBREN_00240" /db_xref="WormBase:WBGene00138965" mRNA join(<458844..458982,460119..460241,460283..460360, 461718..>461818) /locus_tag="CAEBREN_00240" /product="hypothetical protein" /db_xref="WormBase:CBN00240" /db_xref="WormBase:WBGene00138965" CDS join(458844..458982,460119..460241,460283..460360, 461718..461818) /locus_tag="CAEBREN_00240" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54358.1" /db_xref="WormBase:CBN00240" /db_xref="WormBase:WBGene00138965" /translation="MLDPRETFEKYERRSPHPTSGQQGYVTERREFVSCEYRREPIQQ EQSRPPSILKNSNNTVYHQDNNRDREHARLACEYRREPPQPEQGQLACELRARPTTTI TTYLPENTKRKLPIGWIVCVAVCIPILIVIIVFAAVWLQEVGFI" assembly_gap 471870..471879 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <478264..>478886 /locus_tag="CAEBREN_25569" /db_xref="WormBase:WBGene00164294" mRNA join(<478264..478345,478396..>478886) /locus_tag="CAEBREN_25569" /product="hypothetical protein" /db_xref="WormBase:CBN25569" /db_xref="WormBase:WBGene00164294" CDS join(478264..478345,478396..478886) /locus_tag="CAEBREN_25569" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54318.1" /db_xref="WormBase:CBN25569" /db_xref="WormBase:WBGene00164294" /translation="MNYITCDSDIQFWASWIDSVVEVEVVTYNPRVPPPATATLDSVP VARVVPMKAGTVSRKATESTVIQNEDLKATIIQHATVIPLEPADSIQEGTVSERPKSE NPAVATVISMDSTVAQEPGITETATVTHRPNVATVSQNTVHEVATVTPQKTADSIDEG TVSEQPKSEEPEISGTKKILKARQKRDKKK" gene <484114..>485873 /locus_tag="CAEBREN_03552" /db_xref="WormBase:WBGene00142277" mRNA join(<484114..484187,484236..484982,485780..>485873) /locus_tag="CAEBREN_03552" /product="hypothetical protein" /db_xref="WormBase:CBN03552" /db_xref="WormBase:WBGene00142277" CDS join(484114..484187,484236..484982,485780..485873) /locus_tag="CAEBREN_03552" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54391.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN03552" /db_xref="WormBase:WBGene00142277" /translation="MTIPLLRLPLLASTKIIKYIDVKYLIFLIQLSTRAKTLVKLSEV HIELTVFQSSIQFQKLAGQGMVGRLEFSDSSEKPEDIPFKPPPQSIFDTKIQYQIRAF KKMMEDFVEFFKVCSVSFDLKSACSYTSLCFLEHAKGLGLKFTTAQVAIGGANPGVYR SLLDVCSNASQLLVLFDTEEAFTFNGFNEYRTHKLRFAVKNRCFNWFTVDHMCALINC SVVSVEELNWSNEDYNRFLKFWMASDGKLKSCTLWACRASIIPWFVLDGINHRQIRYS TYEIQRADGVKAEVVLSFSSCTLKVIDA" gene <494383..>502009 /locus_tag="CAEBREN_13000" /db_xref="WormBase:WBGene00151725" mRNA join(<494383..494437,496652..496845,496896..497003, 497051..497231,497285..497562,498423..498509, 498620..498845,499238..499376,500285..500489, 500536..500724,500794..500963,501598..501739, 501857..>502009) /locus_tag="CAEBREN_13000" /product="hypothetical protein" /db_xref="WormBase:CBN13000" /db_xref="WormBase:WBGene00151725" CDS join(494383..494437,496652..496845,496896..497003, 497051..497231,497285..497562,498423..498509, 498620..498845,499238..499376,500285..500489, 500536..500724,500794..500963,501598..501739, 501857..502009) /locus_tag="CAEBREN_13000" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54119.1" /db_xref="WormBase:CBN13000" /db_xref="WormBase:WBGene00151725" /translation="MNWQKQRQHVLDRLAFVPGGTDREGNALLVVSTSQVQECSYENL VSLLALLSDTLPPSTVFTVLLDTRHIHLKQLKFYLRACQQALYKKVRQVLIIQPEKFL DQQKINFDLIVSGYTLKTVLISMHKLSKFVDVNQLPEQFGGTLGYDPDAWLEVKKWQQ YLTEIDADSSKHNSDDDQRLEEFVSKLQSTKRVEDEYSASLLKRSIREVKLKEEENSK EGLIKDHTAGVSDFLDWIEGSGEKWLNSLCQVADNVDEAESLVKQHEELTNKTKEIEE QSHQLAEMATRLMAACPQVAIVLQKTREQIRDVAEHFAYRVEAQTQFAVSNKTFREKV GEFIKKSDQMLEKVCAEDGNSVKTIEELTSTKKELDDLVNSMNVSFESAMDAGEETVA KARQYAEVLPTEEFVSHIASSLTYISQRQNRHNELASVKRLEQQQHIQLMTTYGDCDQ AIKWLGELKETLHKEYSLSDIDEDAVRHLRTDRQNLDRTAISTYQYGKQLLSMAKNSE RSSNKEGSSEERKEKLEAAWKELDLAIQNNEQRLKVVESFMATHRQMMDRVNEIERSL RERLRVSGKLNSITMSTDRKRLRNDIEELSNIGKMLSAQINADHTTTPQDRQTAIKQI SDKIDEVMTAQRRMESLIGEEEEAGSSSSGKEEKTTPRKSRPLSKVPEEEGGDLSPVF PRAVRLLETNEGIAPAIRLSKNESYL" gene <505846..>507640 /gene="Cbn-nhr-26" /locus_tag="CAEBREN_15711" /db_xref="WormBase:WBGene00154436" mRNA join(<505846..505932,505984..506656,507378..>507640) /gene="Cbn-nhr-26" /locus_tag="CAEBREN_15711" /product="CBN-NHR-26 protein" /db_xref="WormBase:WBGene00154436" CDS join(505846..505932,505984..506656,507378..507640) /gene="Cbn-nhr-26" /locus_tag="CAEBREN_15711" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /codon_start=1 /product="CBN-NHR-26 protein" /protein_id="EGT54448.1" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR008946" /db_xref="InterPro:IPR013088" /db_xref="WormBase:CBN15711" /db_xref="WormBase:WBGene00154436" /translation="MLELTISAETEEPRDCKICATKNAGFNYGVQSCNSCKMFFRRAL DTSKMITCKKEENCNILDPEGSKCRFCRFHKCVLVGMKFIDSPQDPSAIINDLLHKDW TRNQHFLTGKAASTVKFKDIFERGVFLFEKKSEDTVFDFYEWGVMNHLTCINFETSLS FMKYLSKSDLTCVLKSSHLLYMIFVTAWRSYTAKKEFMCHPDGSDIFPSEVEPSAYNE KLINEIRCYLLSCLICLRVTEEEFLLLGVIIVCNPGIPDLSQTGRMLLASYQSMYGQT LQRYCSFKYGSNAGALRYLEIISLSTAIARCHSAIANFSTLFPIHQPQHVKVNLFTEI LAFLIK" gene complement(<508629..>509585) /locus_tag="CAEBREN_23858" /db_xref="WormBase:WBGene00162583" mRNA complement(<508629..>509585) /locus_tag="CAEBREN_23858" /product="hypothetical protein" /db_xref="WormBase:CBN23858" /db_xref="WormBase:WBGene00162583" CDS complement(508629..509585) /locus_tag="CAEBREN_23858" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54138.1" /db_xref="WormBase:CBN23858" /db_xref="WormBase:WBGene00162583" /translation="MDINSDMIHFKTRANDVWDRMVKGTNQPTTPSFGRLILAKRAAG YATGDSAQCNCAAQSTGCPAGPPGPPGEDGAPGEPGEAGKDGENGSAGVADTFLGAEG NCIKCPEGPPGPPGPDGNAGPEGPAGPAGADGEAAGPGLAGPPGEPGPAGPDGQPGAP GPDGQPGAAGQTSTNQPGPPGPAGPPGPPGPAGQDAAAPVSPPGPQGPPGPAGKDGGP GAPGAPGGPGTDGAPGADAAYCPCPPRTPGLGEEAPAAAPEAAPEAAPAEAAPVAAPD AGAAAPTGATQEYNGNAAGVAADGGAKGTYSGSAVVRRRARY" gene <511839..>512870 /locus_tag="CAEBREN_07114" /db_xref="WormBase:WBGene00145839" mRNA join(<511839..512069,512421..512477,512640..>512870) /locus_tag="CAEBREN_07114" /product="hypothetical protein" /db_xref="WormBase:CBN07114" /db_xref="WormBase:WBGene00145839" CDS join(511839..512069,512421..512477,512640..512870) /locus_tag="CAEBREN_07114" /note="contains similarity to Pfam domain PF00635; contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54320.1" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="PFAM:PF00635" /db_xref="WormBase:CBN07114" /db_xref="WormBase:WBGene00145839" /translation="MTSQDTLRADVDDKKTIDEQQTKEPAKKLVKIVNGKNEPEFQLK LIPEHLIFKYASLGPGFATFTIVNTKTDRQAFKVKSSDNTFYRSKPSVGFIKPGEKMH IRVTYLNPYQNVPNENQHTKHIAVYHVSAGNAKTYKEAFEKKTDGVYHYYCNHQADMQ QVDDNTDTDKKV" gene complement(<513805..>519877) /locus_tag="CAEBREN_14041" /db_xref="WormBase:WBGene00152766" mRNA complement(join(<513805..513915,514272..514382, 515177..515722,517774..518023,519196..519545, 519839..>519877)) /locus_tag="CAEBREN_14041" /product="hypothetical protein" /db_xref="WormBase:CBN14041" /db_xref="WormBase:WBGene00152766" CDS complement(join(513805..513915,514272..514382, 515177..515722,517774..518023,519196..519545, 519839..519877)) /locus_tag="CAEBREN_14041" /note="contains similarity to Pfam domain PF00856; contains similarity to Interpro domain IPR001214 (SET domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54312.1" /db_xref="InterPro:IPR001214" /db_xref="PFAM:PF00856" /db_xref="WormBase:CBN14041" /db_xref="WormBase:WBGene00152766" /translation="MAQAPPNKMKARPDPPFLMDGDYTTYVNSSVKERVEILRNQCIE VHRPQENYFKAVAREHNRFRARIQADPELKEWKHDFMTEKDSGVLRRILAQRTLLALC TDESLKKKDEHLVFGRKQKELTPPPPGFDPKKYDGMYRTPDVRFQITSNLTFNKYNPI PVYCDVSNTLDELKTNIPDTLAFQYINVNVVDPVKEIHLANAIEMANESPNNRGSLKP ILFKHSREMFYGYCGFSCSKLCGCDGKCDLNAMFLIEKNLFPLEIFRPDPIIGFGIRS PVFIPAGTPVMEFTGEIMSRKRVGSENNYTYQCSYHNDDKWRLFLGQQPRFNDNYRKL LLALHQIDYYVDPTFYGNVGRMAAHSCCPNMEMIRIFRESLSPAHLSFVMVTLEDVFP GTPLTIDYGSLYELESCKCNSFACRSGPNADVFKKFNTLSLTNVIRKIHNVRRQNFQR SVLDPMQKFASKTERMDN" gene complement(<522380..>529593) /locus_tag="CAEBREN_15885" /db_xref="WormBase:WBGene00154610" mRNA complement(join(<522380..522493,523197..523325, 523803..523970,524062..524170,524215..524555, 525603..526077,527039..527399,528183..528353, 528399..528529,529346..>529593)) /locus_tag="CAEBREN_15885" /product="hypothetical protein" /db_xref="WormBase:CBN15885" /db_xref="WormBase:WBGene00154610" CDS complement(join(522380..522493,523197..523325, 523803..523970,524062..524170,524215..524555, 525603..526077,527039..527399,528183..528353, 528399..528529,529346..529593)) /locus_tag="CAEBREN_15885" /note="contains similarity to Pfam domain PF02493; contains similarity to Interpro domain IPR003409 (MORN motif)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54413.1" /db_xref="InterPro:IPR003409" /db_xref="PFAM:PF02493" /db_xref="WormBase:CBN15885" /db_xref="WormBase:WBGene00154610" /translation="MNGGRFDFDDGGTYVGGWEEGKAHGHGVCTGPQAKGEYAGAWHY GFEVSGVYTWPSGNTYQGQWQNGKRHGLGVEQRGRWLYKGEWTQGNKGRYGVRQSANS QARYQGTWSAGFHDGYGTEIYVDTGSYQGQWLRGMRHGYGIRKSTTYANAAKFRSKSQ THASLTSLRSGRVEEENGEEHRHKEGLSGRGGFVLRANSAAPQRRRRSLSERSLAVKR TLLSGLRIKKQHSTGDIHQRVASMTGSLRSSGSTMSCTSEDSLHHHGLQQPEEEAVEE SSIETYMGEWKNDMRSGFGVCERSDGLKYHGEWANNAKCGFGVTTFKDGTKEEGRYKN NILIASSKRKGVIFMRASKFREKLEQAMGAAQRAASIAQQKADIAASRTSTARERSEQ ATFIARQANDDSEVARICAKQFDPSFKQPGTRRLLKDNNGGESFGTDLSDAISYSRHL SQTHSKQHSFEQTLSVDMADDMTPPSKAYHNHVSSNTNHVNFLPQYGYADPNSQLQTP INSQDLLQQQSHNIPIHDPTMIPSVSVVQEEEKPLILQQPQTSNTSQPGPSNLNTQAP NVMSSRFSLSDDHYDQYVMAGGSQQQQKLRRNRPSLMRQADVNESSAGAQGLNRRSTL ASARDRNGDVNHPVPAQRLAAAAATGDGDNMGSLPNLAELETQGVRLRREEAARLAGQ RRQEVLREHEEAALLRANPLRHLLQPAFRAWLVRWRIPILLAIANISLLMLFYHLLTY EKKKKSSS" gene 522612..522684 /locus_tag="CAEBREN_27377" /pseudo /db_xref="WormBase:WBGene00187988" tRNA 522612..522684 /locus_tag="CAEBREN_27377" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN27377" /db_xref="WormBase:WBGene00187988" gene complement(<536750..>542305) /locus_tag="CAEBREN_25762" /db_xref="WormBase:WBGene00164487" mRNA complement(join(<536750..536900,537603..538258, 540992..541051,541101..541222,542290..>542305)) /locus_tag="CAEBREN_25762" /product="hypothetical protein" /db_xref="WormBase:CBN25762" /db_xref="WormBase:WBGene00164487" CDS complement(join(536750..536900,537603..538258, 540992..541051,541101..541222,542290..542305)) /locus_tag="CAEBREN_25762" /note="contains similarity to Pfam domain PF09728; contains similarity to Interpro domain IPR019132 (Taxilin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54356.1" /db_xref="InterPro:IPR019132" /db_xref="PFAM:PF09728" /db_xref="WormBase:CBN25762" /db_xref="WormBase:WBGene00164487" /translation="MGKNFDESTLLKSLEGVSDADKVQKLIKKLGESEKQNAELKAKL VDFDKVVKVKDLTEKKLERNNQVLLRTEEAKSKLEELCRGLQKANQQTRDESIAKMKK LEVERAQAVEQLKITLKDIEKTMAEGRCKSDSLAEDNKKLSEKFTEIGQQYEERMNVI DQQMQKKEKYWEEFGKAKDLEIKLLQAKLDASSIQVKKAGMEKDELAKIVLEETARVG GALQTEKALRDQVKEYSSKYSELTSCLAKSNEAFDKFKKEIERVNTKCNQIEKEGVIF KKKYEEANQKVLVLTMDNQEMQEKFAQYEKKIQMLENLCRALRKGNGIITEEPTTDTA " assembly_gap 540473..540482 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<543408..>543918) /locus_tag="CAEBREN_01559" /db_xref="WormBase:WBGene00140284" mRNA complement(join(<543408..543791,543841..>543918)) /locus_tag="CAEBREN_01559" /product="hypothetical protein" /db_xref="WormBase:CBN01559" /db_xref="WormBase:WBGene00140284" CDS complement(join(543408..543791,543841..543918)) /locus_tag="CAEBREN_01559" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54363.1" /db_xref="WormBase:CBN01559" /db_xref="WormBase:WBGene00140284" /translation="MTDIFSDDDDFDAFRERLFDGPHEEKDEEFVPMFGLYALQRNPS SKPKPREDIFIRALEAPSSNDLDPYKDVIFEHKKPEFKADNFCENFSFFGMNQNRFRM EAPRLSREEQIAERNKLLEKARRMREEKEEQEDEEEEQDYSEEEEEQENLK" gene <544326..>544802 /locus_tag="CAEBREN_01043" /db_xref="WormBase:WBGene00139768" mRNA join(<544326..544351,544402..544484,544536..544603, 544653..>544802) /locus_tag="CAEBREN_01043" /product="hypothetical protein" /db_xref="WormBase:CBN01043" /db_xref="WormBase:WBGene00139768" CDS join(544326..544351,544402..544484,544536..544603, 544653..544802) /locus_tag="CAEBREN_01043" /note="contains similarity to Pfam domain PF09696; contains similarity to Interpro domain IPR018607 (Chromosome transmission fidelity protein 8)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54430.1" /db_xref="InterPro:IPR018607" /db_xref="PFAM:PF09696" /db_xref="WormBase:CBN01043" /db_xref="WormBase:WBGene00139768" /translation="MQIKLIHNPEGDQEWMGIEMHGTIAPQEGSFDRKTLGTLCWGDN NNVYMVIGNQTLEGKVSKTDRPLLVIQKTECGDDGEKNAVVRAVIRKKIVFKARPRPL VISTVG" gene <546531..>547004 /locus_tag="CAEBREN_29908" /db_xref="WormBase:WBGene00191873" mRNA join(<546531..546623,546685..546853,546904..>547004) /locus_tag="CAEBREN_29908" /product="hypothetical protein" /db_xref="WormBase:CBN29908" /db_xref="WormBase:WBGene00191873" CDS join(546531..546623,546685..546853,546904..547004) /locus_tag="CAEBREN_29908" /note="contains similarity to Interpro domain IPR012292 (Globin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54248.1" /db_xref="InterPro:IPR012292" /db_xref="WormBase:CBN29908" /db_xref="WormBase:WBGene00191873" /translation="MGSSTSTPPPPAKSKKPAQKAADNQILTSYQKVIVRNAWRHMSQ KGPSNCGSTITRRMMARKSTIGEVLDRSTLDYHNIQIVEFLQKVMQMLDEPDKISKLC QEIGQKHAKYRRTKGMKV" gene complement(<547300..>548551) /locus_tag="CAEBREN_01764" /db_xref="WormBase:WBGene00140489" mRNA complement(join(<547300..547442,547491..547908, 547957..548399,548446..>548551)) /locus_tag="CAEBREN_01764" /product="hypothetical protein" /db_xref="WormBase:CBN01764" /db_xref="WormBase:WBGene00140489" CDS complement(join(547300..547442,547491..547908, 547957..548399,548446..548551)) /locus_tag="CAEBREN_01764" /note="contains similarity to Pfam domain PF02207; contains similarity to Interpro domains IPR003126 (Zinc finger, N-recognin), IPR013993 (Zinc finger, N-recognin, metazoa)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54380.1" /db_xref="InterPro:IPR003126" /db_xref="InterPro:IPR013993" /db_xref="PFAM:PF02207" /db_xref="WormBase:CBN01764" /db_xref="WormBase:WBGene00140489" /translation="MENREEIEKKEESSAPDPVVPDPPATEKPTEDGADDTTVTVGEM LEELDHQEKVANMLFANQNASVCTFPEGYKPRQPLFACLTCTPAPTMAGVCYGCSLNC HDGHNIVELYTKRKFKCDCGNSKFGDKKCALYEEKDPVNEYNSYNHNYHGNFCSCDVF YPEDDSGNELLQCEICEDWFHDIHVSPTYVQYETERTENSGVECASMICTSCSKKLPF LSQLKNGKDILCHSKLNKEQIEETAEPKAFVIEHFRKKLCRCADCTRVYDLADCEFLL EEEDDITKFEKDSKDKIAAEPQPTEADEMRELVREVGMDGAQRIYEGVDTFKRKFTEF FGGSSDGGRPVSVEDVKRFTESLKADLDAKRARMQ" gene <549745..>557244 /gene="Cbn-nmy-2" /locus_tag="CAEBREN_00030" /db_xref="WormBase:WBGene00138755" mRNA join(<549745..549789,549842..550144,550511..550695, 550743..553227,553276..553421,553470..553998, 554458..554646,554694..555383,555431..556295, 556563..557009,557117..>557244) /gene="Cbn-nmy-2" /locus_tag="CAEBREN_00030" /product="CBN-NMY-2 protein" /db_xref="WormBase:WBGene00138755" CDS join(549745..549789,549842..550144,550511..550695, 550743..553227,553276..553421,553470..553998, 554458..554646,554694..555383,555431..556295, 556563..557009,557117..557244) /gene="Cbn-nmy-2" /locus_tag="CAEBREN_00030" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002928 (Myosin tail), IPR004009 (Myosin, N-terminal, SH3-like), IPR001609 (Myosin head, motor domain)" /codon_start=1 /product="CBN-NMY-2 protein" /protein_id="EGT54268.1" /db_xref="InterPro:IPR001609" /db_xref="InterPro:IPR002928" /db_xref="InterPro:IPR004009" /db_xref="WormBase:CBN00030" /db_xref="WormBase:WBGene00138755" /translation="MMASRTKNDEIDLLRAKTDILNPSITADWAKKQLRWVPSEKDGF ALGAIIGSPHPDGTIDIELMETGERQRVSSDECQKPNPPKFEKCEDMAMLTCLNEPSV LHNLKQRYFSNLYYTYSGLFCVVINPYKRIPIYTDTIAEQFKCKKRKEMPPHIFAVAD EAYRSMLQERDDQSILCTGESGAGKTENTKKVIQYLAYVANRSMVKSRKTSVDLDTSS NRMMGQLEEQLLQANPILEAFGNSKTVKNDNSSRFGKFIRVHFDSTGCISGANIEFYL LEKSRVLNQAPNERSFHIFYQLLKGLSKTQREQYLLEDSLSKYNFISGGDSKLAGVDD AAEMRETLNAMSIMGLSDEEISAILRVVSAILLFGNLEFSQENKNNDQAVLLNDAVAQ KIASLLGVNMTEMMRAFVKPKIKVQRDLVHRAQTVEQVVFAVGAIAKASYERLFKWLV HRLNKSLDRTRQQSVSFIGILDIAGFEIFETNSFEQLCINYTNEKLQQLFNNTMFVRE QQEYLDEGLEWQFVDFGLNLQPTIDLIEKPMGILSTLDDVCLFPQGNDKAFVQRLKDT HSQHPKFILPEIRATSDFAVVHYAGRVDYQSEGCRVKNMDPLNDSVIDLLKVAKESLI AEMWKDVADVCSLSAADSTSDTGVFGSRMPKKGMFRTVSQLYKEQLTRLMSTLNNTNP HFVRCIIPNHEKKHGVLNAHLVLDQLRCNGVLEGIRICRQGFPTRLPFQEFRQRYEKL LAPDVNPAGFMDGKEAVRRIVQHVEIDDNLYRIGQSKIFFRAGVVAELEEGRDEKLSA LVMAFQAECRGWLGRRVMVRRRQQEVAIKILQRNGLAWMRLREWQWWRLLTKVKPLLE VTNKDELIAEKEQELKVTSEKLRRSEVFIADYKQQMEKMDEERAVLKTRLDAESSERA EMFEERSRIAARKIELEGLLNETAKRLEVEEQKAKKAESETRKLTEMVRLLEGNLEDE ERSRQKLLLEKNSIESRLKELETQGIELEDSGNKLLKEKKALEERCEDLSSRLIDETE RSKQLMKAKTRLEANIQDANDELEKEKQQRQHAEAARRAAEAQLREEQEACLERTRKA EELTNQLMRKETELSQISIKNDEELAARQQLEREIREVRALCDDAVDEASKEKAARQK AEKARRDMAEELESYKQELEESNDKTALHSQLKAKRDEEYAHLQKQLEETVKTSEEAV EEMKAQSQKKIEELNETIDQLKRQKSLADKAKSSAESDNENIRAELSNVASARQEVEK KRKAAEASLMEKEHKMREMQSNLEDLMAKLSKMNTELEGIQKAKSEGETLNSNLLKKN ASLDMQLTELTEASEEDRRTRANLASRIRQLEEDLAVAIEAKEDALTAQEKLDREAKE LKTQLAEARKKLDEENREAMEEIRKKKEKELLAEKERADAAEQARDKAERAKKKAIQE AEDIQTEFTNMMAATREMERKQRKHEQQLADERNNTLQAQQERDLAQQMLRDAETKAL VLSNELFERKEAVEQLEKDKRTLKMEIDNLASTKDDAGKNVYELEKTKRRLDEELSRC EAQIIELEDALTIADDAKSRLEVTMQAMRSDFERQLANRDEDEEDRKKGLVSKIRNLT EELEAEQRAKQNAVANKKKFESQVNELTEKNEAAYRQIEDLTRQLRKAQLGYKDVQLD ATEARTAMEDALAAQREAEKRARAAEDEIRSLTADVQAITSSKRKAETERDELIDEIS SLRASSSSNEERRRLLAKITDLEEQFDEEASANEVAQEKVRKAQQQLEQMTADLAMER SLCERTESDRLALERANRDLKQQLADAESTALARLRTQINLAEAKVVSLEQQLSLEEQ DKTRLARSLRRMETKNAELQQMNDEKDREKETNQQTIDRANARIRQLRSQLEDAEAER DRFNKQAKDERRRANEATDLNETLSKDVSILRQRETAARRTPGLIGHRESRRYGSSTS LARDEFRGSALTNEMSPSDRPASRLTSGTGSQLGNTDEDRDSVRN" gene <557978..>567945 /gene="Cbn-smgl-1" /locus_tag="CAEBREN_08721" /db_xref="WormBase:WBGene00147446" mRNA join(<557978..558048,558104..558220,558941..559536, 560194..560807,561458..561841,562447..563336, 563384..563488,563534..563899,564381..565836, 567724..>567945) /gene="Cbn-smgl-1" /locus_tag="CAEBREN_08721" /product="CBN-SMGL-1 protein" /db_xref="WormBase:WBGene00147446" CDS join(557978..558048,558104..558220,558941..559536, 560194..560807,561458..561841,562447..563336, 563384..563488,563534..563899,564381..565836, 567724..567945) /gene="Cbn-smgl-1" /locus_tag="CAEBREN_08721" /note="contains similarity to Interpro domain IPR000408 (Regulator of chromosome condensation, RCC1)" /codon_start=1 /product="CBN-SMGL-1 protein" /protein_id="EGT54202.1" /db_xref="InterPro:IPR000408" /db_xref="WormBase:CBN08721" /db_xref="WormBase:WBGene00147446" /translation="MAHMRGTNHEKSKLENEKILLKERYPLIKWQSNVEMRTPNLLIP VQIANYVESLPICKLAVSPKCDRVAVMSYARQLDIYQISGEILDHESSVQVLEEMSPE YCLLQFSSTSTLILSSRSAPHIDVFDNMGAFCYDIPLEAHEGIFDVNTAICGMQTVPN TNHLNSSNDKFIEILYVLQYSGVFSAFKIGRLSKVKYERMWSVQLDIGQTGSFIVLPQ YNLLLVSSHHKESASVAPPAGLCSFRLVDGEPHVEPIRTSTPEGGFFSRLPFSTSFMT YLPKLSLSFDSQLLVTVATTGSLHLFEIPSLRVRFSFHFISGPRPVEACFVDTDEIAV IYDNGYLLRCSIEDLEERMYSMKVKSKKQIEEEPDHKDMYSEHTVMVAPAKREIFLLT AEGDNSVLREAAHKRVQLAGQLWFYTVWNSFKKLLGMAMGEPAEQLQMATHIAKFDFA LIHSPTRTLQELFNRTLVEHDYTRARELAETYDTIDIDVVLKSEWIDKCSKNKVTVED VEDILKRIGDSEWVAAQCTNVDSDDFEVHRALIDLGLSLGESSVTWQIRLLHHLRILE VCRIKGDVDAYMVSRKGSCLDAALSFAHNGDIDSLTLIIESNMAVMKCHQKRILSAIP SCTSPTKYEMLMPNCHDGEEEKWELEEQTDGVCERLHQILIEHPDVDALIRNINVGNI EDEGEFDFVAWVRETLPKIDFECGLTDICVNLLHIAMERGYHELTQDLAIWEYYAKYI RISSSVSESITSFQDSTVKSFTDRFSRLLDTELIEHAKEIVSLIQWKVNTTEGEGTPD ERLREVVTKLMKATNERTTKVLVAYRHATPEVVDDHVILEVLLNMTSTGADLMKSLVD LNVDKYSNVTSSLQSLMSRGVNMTFKSIFESMKEPDGARRVLIKLSRSGNCSSVEHWI SLRDDIYDMANGIYTDLVTTEEALELVAGEILEDERIGSHPELMDLVLTLNPREQNQD PKKLSVAKSAEVLLAKSDELMSEATGRNDRLLGKSRFFAVAARPISPKKSKEKLDWLD AIDAALELGCTMMPIAIKLSDHDTLLRDVVRLGTNYRQMKKVLSFAKQLNIDTPIATA LSYCALAALDANDADCLKKYIGEIMKANGVPVVHQLCMKIMDSPHVPTDMEDVYSCAI NNSNDENVLETILAIDESQKRLDAARRVKVFRKEEIPISENVVGDPMYTSLRFYSSRK EISEEMKNRIKSFENDGKRDDFDIMKRFYAHESSTRALCLSLQKPAENEETGELSWTS NDKLRRYERGLRFFADQGAPLSLLITAPASAIIREANKGDASITAIDRIEDYQCDRSR FIGDKEYRTESIIGLAGTENEQQFADALELGEKYRIDEWQLHMASLEYLLDPSYNIPR NDVKLIMKSRKHLSKLRTRPDDFHHRLRTMVLTSLETNEQFLAYTSLFAETEPEKKVQ ETIKEIVSKIKSADAIKMWTDAKYLSSILTQIPDGKLRTFINSILLIPKVGATACEKT ADVLLSGTDVRPPANPYIIYLLLNSNVEEFLDLVSNKKSRDDEIAYLDHAVLLLDNTP KVPELLKEAVRARAEKMHRATVTPEPAAPSNGSGFASYFSSQDDNSGMMKRRKN" gene <568194..>583875 /locus_tag="CAEBREN_20824" /db_xref="WormBase:WBGene00159549" mRNA join(<568194..568488,569790..570646,571389..571491, 571835..571955,577770..577845,579172..579300, 580652..580974,581885..582767,583639..>583875) /locus_tag="CAEBREN_20824" /product="hypothetical protein" /db_xref="WormBase:CBN20824" /db_xref="WormBase:WBGene00159549" CDS join(568194..568488,569790..570646,571389..571491, 571835..571955,577770..577845,579172..579300, 580652..580974,581885..582767,583639..583875) /locus_tag="CAEBREN_20824" /note="contains similarity to Pfam domain PF01064; contains similarity to Interpro domains IPR000472 (TGF-beta receptor/activin receptor, type I/II), IPR018170 (Aldo/keto reductase, conserved site), IPR013032 (EGF-like region, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54269.1" /db_xref="InterPro:IPR000472" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR018170" /db_xref="PFAM:PF01064" /db_xref="WormBase:CBN20824" /db_xref="WormBase:WBGene00159549" /translation="MKTGGAKLKREDSDEWLCSSTYQPTQEEIVQKPSIERKSTKKKL KVVVPKKVKNPPKKDYVNIEEADDVDILNFVSTSRGRAPVSSRVKIVSPAIPKSTSSL RIDSSPPVLKTRKSSSKLDIEETPRTPVSGVSRIKIVTPAIPKTTKTFSPPISQIRQS PEQLFAALTPKRRCSFEVVETSAKRRREDEDPFGNEEDSENDSEVSNVFDALSPVKTQ FDSPLKINNTQKFSLDFITGYEAQFTAFEDTQPIENVLDDRESPDLFDNLEDPMSIYE ESEAKELDCSPMKIEEASPEKMLEKMLEMKPEKSKSIVKFKFFESEEVKAVKKTLRFV EPEVPKNYLIEESCAAHASVYREYAIDTETCAMQLGESSSVLPGADDETQKYLNAESC AQLLGTPLSDSQEDEIYERDELYGLSARLASLMSSKSSERRLLMSDVVFGTVPKEKLI KLELSSLRRCQCSTSRGGIPCHGEWCEVRNNGTHIAACAVVKQEHPETGRLTQVMACA RVSQRADQGYCTFDVKRNASKCWCTHGDYCNVDLVDRIRDKRLSTEGDDSQDEEEEEE QEPEEDEFKMEVETNTEFNENDNTIDSGDSSRSMETQHQYPQLPPIPDVVNAVDMRKP VEMKELSQEDADLPPWRRMNPLNAPGSYNPPPPPPMPGKHPIAPATTTTTTTTTTTTT TTRPPTTTTTTLSYEERMRQYEERRRELELQREAEQKRRAQLERQRMEERRHLESQHE ARRRFEEEKRGWRGPEVPVTSTTTTTTTKATTTTTVPTTTPTTTTTTTRPPTTTTPTT TTPKIPEKKESKSDSSSYWKNFRRPNRPFDLNATPAVSVANVNAIVYPPKQFVKATTK TTTTTTQPPPPTTTSQPIIYPPPGFRKATKPPATITQLTTTTELAYSLPMSDDEDGDD DGVVLNNGYERKMIEMPRVGEPDEDNDVVLYTPKPSVAPPRLPPPTPTKPTPSVRTPV EKMDEYKKLVAEKEPSSASTTFSIILPLFILFLLL" gene <586175..>586399 /locus_tag="CAEBREN_32488" /db_xref="WormBase:WBGene00194453" mRNA <586175..>586399 /locus_tag="CAEBREN_32488" /product="hypothetical protein" /db_xref="WormBase:CBN32488" /db_xref="WormBase:WBGene00194453" CDS 586175..586399 /locus_tag="CAEBREN_32488" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54244.1" /db_xref="WormBase:CBN32488" /db_xref="WormBase:WBGene00194453" /translation="MGANRVVKVEEGVIRLTSHPNMINAYWLSPSNHLSRNKGALLTA DPTTPGAGCRLLTFLRAEKREEEHLLSRLP" gene complement(590146..590216) /locus_tag="CAEBREN_27487" /pseudo /db_xref="WormBase:WBGene00188098" tRNA complement(590146..590216) /locus_tag="CAEBREN_27487" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN27487" /db_xref="WormBase:WBGene00188098" gene <592573..>596166 /gene="Cbn-unc-55" /locus_tag="CAEBREN_01544" /db_xref="WormBase:WBGene00140269" mRNA join(<592573..592618,592939..593252,593979..594060, 594362..594459,595990..>596166) /gene="Cbn-unc-55" /locus_tag="CAEBREN_01544" /product="CBN-UNC-55 protein" /db_xref="WormBase:WBGene00140269" CDS join(592573..592618,592939..593252,593979..594060, 594362..594459,595990..596166) /gene="Cbn-unc-55" /locus_tag="CAEBREN_01544" /note="contains similarity to Pfam domain PF00104; contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /codon_start=1 /product="CBN-UNC-55 protein" /protein_id="EGT54302.1" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR008946" /db_xref="PFAM:PF00104" /db_xref="WormBase:CBN01544" /db_xref="WormBase:WBGene00140269" /translation="MAAAAQFAASKPSVKESIFEFAAQTIFTTVHWARTSMSNLSKGD QLVLLRHSWTPIFVFALAHSNFSHNLASHLKTTSSSSSESSSCSTGSRSEDEKMIEVK TECVVESVLDEPPFQGFQTTLDKIRDYHLDPVEIQSLRAVLLFSCDEEPLEEKVKIEE IVEKLTTAIDEYCKMNKRNERYQQLCECRQLLRSTGSLPISRLFFSRLLGTTPLESIL SDLLNSPPPPPPIFPPFPLK" gene <597271..>611262 /locus_tag="CAEBREN_06178" /db_xref="WormBase:WBGene00144903" mRNA join(<597271..597370,597419..597670,598494..598738, 599369..600115,600954..601594,602498..603080, 603526..603736,608582..608934,609812..610207, 610867..>611262) /locus_tag="CAEBREN_06178" /product="hypothetical protein" /db_xref="WormBase:CBN06178" /db_xref="WormBase:WBGene00144903" CDS join(597271..597370,597419..597670,598494..598738, 599369..600115,600954..601594,602498..603080, 603526..603736,608582..608934,609812..610207, 610867..611262) /locus_tag="CAEBREN_06178" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54158.1" /db_xref="WormBase:CBN06178" /db_xref="WormBase:WBGene00144903" /translation="MSVNPVNLEAYCAVSDEVAKQVKKYLLDESVDDSKFQRKNSESS EGSETQFCKTTEKKENVEEWDDWGDKEQEQNTLESDESIRNWLFRCDLKTYSDAEYLL VTWESRFVVLRKPPDETHYKIVCKQYIEGDPVGNEITASCLFGLSNVRHIDLLDSIIV ALGTLDGHVYFFTEQGTMLYFDRFSIFEPVNSVQFDVVKTGQTFIVVFTKGFFMINPI SLKSVLYQAKVLIAKGEKTVQEISESIELQSELLAPDIKGNIIHVIFTGLQKPSTFDQ YVSASYDSFYAKVTKPALPLYSTFMVTTEKEFAVFVWHDREEQEKLLDDVIKYGKSLV PSFGIRKFFGISTEPTRIASHMRSAIHAPTRSLILETRIAQSVSRSPDSNYVAVTDRM ARVLVIDVINRQVVLIFKGYRDATVSWVSATQDDRVAQFLTIFAPRRSLLEVWTVLGN VRVCAQHVPSSECNVVPGGETKMLCGLCHTHSDSNSFFIDEKGEFHRIALQFHLALTS RARQDQHDHLRLKDLEQKSIGSDEWFETFSDLRMATSRKSTFQNALHSLSTADEAHAF IARIRSVPTAGSLGDLPNIAEKSVAFYARIVTESKIEIGEFDKKSNYNLDSIVERILE CHMNRFGEREELTNDVLKVGEWLKHVDLSQEDIDVFSDHWTEHRRIQLSNLIFAPLFG SFEIDEFYDTVLEKLPITRTNIVKLFYLKLEKTTNKIDWRSFNRTVEIVVNLEKSEPG ILEKIDRMAMDTKNVTLGMLLLSVCWCVRKVMKGSLDKKENSEEGHLDPDEDPDEDPK NGTLEEWDAVAPEVEHLDSIMMCLHCVALAQTLLSEEDSDDVRIADVAQRIDSYIREN VAKWVVTDSIESETIDKLFPIDPTENLADDGDEEDRRNQMIIDFPDEKEDVVQRMYQM IPRVFEHDLVVADVCWEMMSRWFREKDQNFHLIHECTSLLPHSLIDPRLRHGIARLIW DKFVAAAFQSIVQMVEKTGRRPKDRESRKEIGMGEMRLEEFLRECERFLDILMVAVRD MPAPIDFKQDLLVEMAYSSFASHLHQSKSAPPRQDQLSTLAARQSLVNFHLVLHHQHL ALALRLQLTTGLRFHPLRNLFCGTGNRAFFAPLDSHPLIPLDRVDDAILEKRHAFLVK VAEQGSMEERRLARNLEMEWKLTVNEISFMQALASFRHGNDHQGALELASCVRDDRSA VALARVLAGRLLQLATEANKRFSTAHSQYLCALAGEEAARVELYEATEEGDPLVESNP KTWKEAVTSLGRSGNSVPQSAQAAIPFVRMNDIAKLYFGAQWVNN" gene complement(<611872..>619707) /locus_tag="CAEBREN_17787" /db_xref="WormBase:WBGene00156512" mRNA complement(join(<611872..612129,613392..613875, 618236..618521,618883..619025,619586..>619707)) /locus_tag="CAEBREN_17787" /product="hypothetical protein" /db_xref="WormBase:CBN17787" /db_xref="WormBase:WBGene00156512" CDS complement(join(611872..612129,613392..613875, 618236..618521,618883..619025,619586..619707)) /locus_tag="CAEBREN_17787" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54315.1" /db_xref="WormBase:CBN17787" /db_xref="WormBase:WBGene00156512" /translation="MKFVLVSQEEISLSFGNGYKEVFKCDGENDSFWDNPTKIERLEN DQVYEVSNIEGNCQTNAWNRWRSILEQQNNEIECLVFEFGIVENPQLYNYHPSLPSKV VDCQSLVITGKPNAWLTFPVVQFMKPKIDSLYVYQIGYPYNLSTGFGRMEQVKTARKL YCTVAMEKEDVLELEGEDVSVDPLSKNFREFTLFSINGDFQLIAWRSFQNMLKFQKNQ VETLNMSFVGSLDFNKEWNEPERIIPNLPEDTVEVKNLEVTGDCPDEILHKIVEFVKP SLDFLNIWVKVKDLSTVSRVGGMEQMKTAKKVVKSLIQLTFEQSMELEAEEIVNKTKG LTEENYVELLNKTLSTGKPSKFTYSPFYPDPQKIVGNFDSVVQWSEDTAEQFQSLRGS SKIDSEENNKNQFIISSPERSIFVEITKFLIEGFVIKN" assembly_gap 612431..612440 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <623292..>632955 /locus_tag="CAEBREN_31973" /db_xref="WormBase:WBGene00193938" mRNA join(<623292..623473,625422..625616,625666..625777, 627102..627243,628582..628705,628841..629307, 630122..630201,630470..630764,631442..631728, 631974..632190,632840..>632955) /locus_tag="CAEBREN_31973" /product="hypothetical protein" /db_xref="WormBase:CBN31973" /db_xref="WormBase:WBGene00193938" CDS join(623292..623473,625422..625616,625666..625777, 627102..627243,628582..628705,628841..629307, 630122..630201,630470..630764,631442..631728, 631974..632190,632840..632955) /locus_tag="CAEBREN_31973" /note="contains similarity to Pfam domain PF00084; contains similarity to Interpro domains IPR000436 (Sushi/SCR/CCP), IPR016060 (Complement control module), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54275.1" /db_xref="InterPro:IPR000436" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016060" /db_xref="InterPro:IPR016186" /db_xref="PFAM:PF00084" /db_xref="WormBase:CBN31973" /db_xref="WormBase:WBGene00193938" /translation="MVLIPFIFLLFFRRVDPITFPPSASQNSLVVFCLQPFVPENAHV IFNEPGPYAKDTVAKYSCALGFDLIGSEERTCLSDGSWSDEPPICAIDVAFNKPVTQS SGNVAVALGGTMCTMTNDESKSFWEVDLLGDYSIRSISMRLGPKSSPIVSVEAIETAG AVHQCIVDSSLFTINQTTSISCSYDNISRLRITATRRLHLCQVNVYAVNAVSPWQCAQ SQMEVVGVFGGMCYAASRDEQTDWLGAQRKCLDRGSTLPLRIDDSTRRGLRASLSASS SAKAFYWIGASSSMTEWRWVDGEGVGDSADWPGQPSPVPSASEAVLLARPLDWKWVPA SQTAWNSFLCQSKPKFCTSPGVGEATKVTFSSHSYAIGTLCFYSCDAGYDLHGIRQRE CSENGRWTGSIPNCYRKSCGAVRQWKFGRIKLLNKTTLFESEVEYECSNGWHLSNSPS PSYRSLRRVCQSDGSWSSSEPTCELVDCGRPPLIANGRVDVESTTYESAANYTCHQGF RLIGPESLMCGDRGEWQPATPFCYDIATLQEIKGSTSHEQSNPGSSDSTILMAVLASV IVAILCYGITKFAKSSAHSNGDLSISRDKLNSSNAAIYATPSIPPQRPDSVIYYAPTV AHMEVPPHLLQLQQLPNGNIHVTLPIGRQMGRPSLPPSMIFNSSIPPPSPTPSQILYS FDHEPIYDTPPDTHMYQAESVYERLPDRPAPPPPIPIRAESGGNGIDLPLPPPPPR" gene complement(<634027..>635573) /locus_tag="CAEBREN_23413" /db_xref="WormBase:WBGene00162138" mRNA complement(join(<634027..634113,634155..634242, 634285..634371,635485..>635573)) /locus_tag="CAEBREN_23413" /product="hypothetical protein" /db_xref="WormBase:CBN23413" /db_xref="WormBase:WBGene00162138" CDS complement(join(634027..634113,634155..634242, 634285..634371,635485..635573)) /locus_tag="CAEBREN_23413" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54176.1" /db_xref="WormBase:CBN23413" /db_xref="WormBase:WBGene00162138" /translation="MHLQRPLSSFNTSNSANPDVAWSSFIMVYSIPFVLVLVVACIIK WRPYREFPNIRSFLSWYCSCSAKKVIQELEQPDRAHMIMSIDAQSLASMSSVIDSPLL VREDSRRFESTAIP" assembly_gap 643084..643468 /estimated_length=385 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<647363..>658765) /locus_tag="CAEBREN_21902" /db_xref="WormBase:WBGene00160627" mRNA complement(join(<647363..647458,648143..648866, 649472..649864,650183..650604,650836..651259, 651873..652187,652343..654024,655213..655519, 656664..656861,658509..658698,658747..>658765)) /locus_tag="CAEBREN_21902" /product="hypothetical protein" /db_xref="WormBase:CBN21902" /db_xref="WormBase:WBGene00160627" CDS complement(join(647363..647458,648143..648866, 649472..649864,650183..650604,650836..651259, 651873..652187,652343..654024,655213..655519, 656664..656861,658509..658698,658747..658765)) /locus_tag="CAEBREN_21902" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54341.1" /db_xref="WormBase:CBN21902" /db_xref="WormBase:WBGene00160627" /translation="MGNVSDNDTRSPPTLDLSRFSSANGDQSSCSLEWFDAPENISTG SVTASKDEVDSVFRSLPRKIAPDPSLSLITCLDQRYEIRLKTKEEGQTGERGSSEEKV IKQMEMEEEEDEKTNENDEWNDDGEKKENFDSTGSSSTPPTSSIQLLLPSNTPDVLSD IPSAVFLDSPPPLPPLTPSSSSPPTSTSFDEEDLLTDDTTPSNPTDAEMGMIMMKKEK KKNRKKARQLTKVNQKERQIRQRLDADRIREERLRKEQQQQQELVVKGAEEKEQQEKE PSGYPTSEYRYSTSSEADAPENSEVTEVDMAVETFQVIVDGQIREVSPFVPRNRQSSS GEDPTPPPPPASSSTSSVYDIPEHPPRVVPFRDAPIVTSHPPPPPSFMPMPYNPQAPP PPIMVSSYGPPQRMIPIPRPPIPGPPIPGFPVAPPGMPVMQPMYFAPVHRPPPMVAIG PPPPQFRQIAPPMMAYPHPPPPQAPQPQAPLQQQQRPVLQANRRRPLAITAPPPPAQK PQQSKNQQSSSSGTSGPSGSQNTSRTSSKAKKMPDATKKVITYIEKNKDQQQSTSGIP PNAPTPSRSNSGSQQNSESETSNSTSSSSTTVVEEPVEKAVEPVEPVKQAKVEVEEVS EEVKEVAPQEQGPPGIPAPPGLTAPPGLPTPQTASLESHNEVLHSLVAAVLHDSDDEL PIPSASSSSTVSQPRPLSPTSETQQKVINRVLEFTKELENGRDTNGIWGEKPAKPMPM PPPHDVKFSKITEDFENNVLMTTSRKSEDIVSVKPVPVEEDEKKVTFLSICKKLEPFF GECGEKWRGARIDGEQLRAIFIEAYGGQIPRDHWTILEKVCTFQPGYLNVFDAIIGNS LDWTYSFVSTPEFMQDKGTDELYTLYQSMPPVDGVDNFFKRFEQMITSDLIKVLSNRF VSVRTFVAIVEIVCDVTTCDLYYLATLVFGSRQFMAKFNARIKQIQISRNGGKIWVRQ TMMDPLHPNKPSHAPAPEERTKTVGDFLTRLRPYINDLLQYLPDAVVNDVEFFKAAKL ICNWIGDDEERVWKSIVKDRAKFQEFHEAYQPFLRIEIRMGAIYLRKLTYEDDYDTDG DEDPLSIISNRDADVNLISAIKSEDVNRKEKKCVSYAAEIELITPDAPSEPVGRSRSS QTDEVEMNQLWDLEREVIRLLKQDNIPFAEFIQTERAREMYQFLIDEFKKRDLQHFAF ILEKTMTETREEAWMQIEELRNAAEEARIQLEMAREEHRKEFGELRSRMETISRFEAY EVQVASNSRIEGLREHINKLTQDREAMLREEVKEERARVQRQIREMKEKHAEEKRAYT AEIARLKEENARLLGGQRKLETLEGEHADLTARCETQMMKAKSMCENSSRLLLESQRE IESLREAVLNTPDSQPEDMADLEVPSDVPSTSSASPVSLPSSLSSPCSSSSVPPPQSP PTVKLSRDAARELRIMEKYAAEFQPETLLKFARDLFYMYNNSKANHKERKTAEKQLKE FESAVEYTENIIKENIQMIKLNVVEGLLPIPELPQPFSETVMKKMFEYSDLEMMDNTV VEQPESQYLNIKKTAKKLADFRAADSQKWAESRKSTP" gene complement(<659752..>678971) /locus_tag="CAEBREN_04067" /db_xref="WormBase:WBGene00142792" mRNA complement(join(<659752..659889,660554..661065, 661546..661855,663168..663344,663396..663638, 665576..665764,667642..667698,669137..669860, 672674..672727,673210..673404,673524..673715, 674216..674494,674543..674691,675293..675787, 676261..676361,676409..676535,677311..677424, 677468..677596,677640..677729,677773..677919, 678852..>678971)) /locus_tag="CAEBREN_04067" /product="hypothetical protein" /db_xref="WormBase:CBN04067" /db_xref="WormBase:WBGene00142792" CDS complement(join(659752..659889,660554..661065, 661546..661855,663168..663344,663396..663638, 665576..665764,667642..667698,669137..669860, 672674..672727,673210..673404,673524..673715, 674216..674494,674543..674691,675293..675787, 676261..676361,676409..676535,677311..677424, 677468..677596,677640..677729,677773..677919, 678852..678971)) /locus_tag="CAEBREN_04067" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54125.1" /db_xref="WormBase:CBN04067" /db_xref="WormBase:WBGene00142792" /translation="MADPPLDKSTKMRRLDFPEKTCRFKYTTTELQLALEEIPKEIYY QEELISRAEEYKKIKVHGNIEPDRYKKLLHYVSSKMSRFDLFGHIYFAKGFVKPGQVT TRFELSLGLMGILMEQLEKDGHQISYGYEEHEVILMPHFDIVQMPDVDLKSEFLTRMA NRPFPPSKPLAYLKWLYTHLGPTLDFIFNLKLAGPRMLPPTPAITPTKHFLRVMRLGA KGKEVVYVDELRLAVGRLVTVKFPASPKLKFRWPNQYFSAKYLDYALRLFGLNRDQFE LILTVTDEREPNNYCFSQGPNAENVIPAECCFFRIAKDLTRLEIGKDDEQIGDLFECY NKLLENGQVLPYTVRYFAYGEKIRPNYKTLKEFIERRGRGGTVYVAGPTTKTSTTSTN KSSTCKGKVKMHELNLKRKLNYKIPLEAISKIPVDCKGLVMNVMDTYPKFALLLHEQG FCEPGIFCYADLFKMDAIIFKCGENDELMKKRIKFALLHDNGTNDNARRKFLGSVDEH LVRIHAPEPAEPNEKRCKTTVKSNLGMVKSASIADISDELKNMEIIDEADLVVIKDGD ICAQHKCADPKCSDQPWLHECDDDCIPSLRDNYHASIDNSIQQIQEEQDGKMAKLVKQ VANLEKQLKESRDTVEKQRTSIKEWKSKYEEFEKEQKGIQVQLKGDIKRITAEKSKIE DNYQNLRTQKALSNPESIQLEHKKAMEKVMKRTEVTFFALFLFIIRMYFETQSYKILL KNKEKEMEAFQRKLQEQEQENQKLKDTNAELVDSITTNKEVVALNFKYKDLESELAIS HRESSSKDEKICHLVRQLHKEEKHTYSIKHRVDKLDKALHEKEVLIELKEILEEHAPP SITAAVRRIEKLQKLLDASKADEPLFNHSLRRLRAYEVVEDPVNYFSVIQAYKEYEDA RSAKILYESELTSAIEEIKVSPEHYFMMENVMTNQKKKPVFSVATAKRMQQLHELMEK IETERARRGSRDEAAAKKEQCANIKFEARKDYGMDSEVINFVTRVSEQYRKRNRGMFP FEVFKLILLYICTPDIRRIVGDVEILEFNYHQNLVLSKIEKIRLEFYVYKHRARPVTE PHICKLLDYIIHKIEPTYKYAEVIEFAIDKSELCDVIDELCDQAPKRDYTAKPGQQRH DVFVQKLMWPERGYRISTEIYEMFPELKEFFESKDGIDFYECYMKYIASLWPRMAESV LNHVNAFTNAYFKWMVELLKFPANLPPEIRWKYSPMETPFTKGKAPDSQKKFLLRVFE YYSNGKLKKRYVFVHDIRVMMLKLTKLGVRFYPTGEPIMPEEDTAPLVHEIFEVTGLQ AVMLIIQKLTPFVYDYIELFKTQLHSLAAIEDKFLPIVSPYNAHCIPAVQGMERMAEV LVDEVQIGRRLPLNFRALEVLIRRMDELFTGCQLRTMVDRQTVHDLLKEATGLIGKYN GKLTTASPNFANITESSSWDERLDAFLNEYPQYKELHSLWRSIECPMPPDYKCLTPPG QPSVDEILPHIWRKIDKTH" assembly_gap 664188..664470 /estimated_length=283 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 667316..667325 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 670276..672538 /estimated_length=2263 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<679225..>679728) /locus_tag="CAEBREN_20779" /db_xref="WormBase:WBGene00159504" mRNA complement(<679225..>679728) /locus_tag="CAEBREN_20779" /product="hypothetical protein" /db_xref="WormBase:CBN20779" /db_xref="WormBase:WBGene00159504" CDS complement(679225..679728) /locus_tag="CAEBREN_20779" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54226.1" /db_xref="WormBase:CBN20779" /db_xref="WormBase:WBGene00159504" /translation="MENTVKSLNACIKKVNELKKANELKNENVTIANHVDQEQEYHKK TTERLLAIWSLLVRKENEKCHDLVKMIILLMDSEKNMEIVETEKNLEMVKGKITETLH KKIRGELQNSRKKKEEFEKRLNNIITGIRAIQSYEVPEDVPNYAPYLPVISVEHERAV EKLLPKP" assembly_gap 679990..679999 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<680824..>681637) /locus_tag="CAEBREN_15822" /db_xref="WormBase:WBGene00154547" mRNA complement(join(<680824..680944,680995..681300, 681474..>681637)) /locus_tag="CAEBREN_15822" /product="hypothetical protein" /db_xref="WormBase:CBN15822" /db_xref="WormBase:WBGene00154547" CDS complement(join(680824..680944,680995..681300, 681474..681637)) /locus_tag="CAEBREN_15822" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54147.1" /db_xref="WormBase:CBN15822" /db_xref="WormBase:WBGene00154547" /translation="MKILSSLEDKGLLDDYQKLLCLLVGFLKQLDANLPQYSPQRLED FMAGVEAYADLMLTSRAKAKENKEKMKESELLERVNNDNVTLRIRNIKTSEELKNLNK LSQQKSLEIEKLNNKLQSLEKLKEELSGELVAIQTANSLNGVNDSKKSLKDELKSLQH KVKTLTEENENLRKINSEVGQHNKNMEMHLHAEIDR" gene complement(681361..681431) /locus_tag="CAEBREN_27310" /pseudo /db_xref="WormBase:WBGene00187921" tRNA complement(681361..681431) /locus_tag="CAEBREN_27310" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN27310" /db_xref="WormBase:WBGene00187921" assembly_gap 684050..684094 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <685313..>686140 /locus_tag="CAEBREN_14574" /db_xref="WormBase:WBGene00153299" mRNA join(<685313..685367,685414..685568,685638..685867, 685915..>686140) /locus_tag="CAEBREN_14574" /product="hypothetical protein" /db_xref="WormBase:CBN14574" /db_xref="WormBase:WBGene00153299" CDS join(685313..685367,685414..685568,685638..685867, 685915..686140) /locus_tag="CAEBREN_14574" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54324.1" /db_xref="WormBase:CBN14574" /db_xref="WormBase:WBGene00153299" /translation="MVKLLLQTLLVIGSIVPTACSVVMSPSPPKPPDVVKCGLDHNEL VDLIKVHNNNRIKVAEEKQIANMHEIRYNSDLERSISCSKDGYQCQTTDKLETDSGKI HPLQTEFAFCDTTTWESYTVKSPFSDMSSLGYTSVRSRRVVFAPKNTEAESEVKHGPP GSQCPNGKAASGLCKASWNTEPAIPDVPPPTIQPAVETENGARVTYTFCLIPLLILLV QQF" gene <686806..>687287 /locus_tag="CAEBREN_31332" /db_xref="WormBase:WBGene00193297" mRNA join(<686806..686817,686874..>687287) /locus_tag="CAEBREN_31332" /product="hypothetical protein" /db_xref="WormBase:CBN31332" /db_xref="WormBase:WBGene00193297" CDS join(686806..686817,686874..687287) /locus_tag="CAEBREN_31332" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54259.1" /db_xref="WormBase:CBN31332" /db_xref="WormBase:WBGene00193297" /translation="MNQLKYSPALAKHASDFKSCDDLEKQGATYRIDGFSNKEAFDAV KFYAELLKIDKPLPQWIKEHYNPEQTSFVRCYVSERCGRIVWAQERGEEVRKLGDRDY LDIYGPERFFSMHSFRHGPPGYMCRYGHKDGLCQEKGSN" gene complement(<687834..>688536) /locus_tag="CAEBREN_20863" /db_xref="WormBase:WBGene00159588" mRNA complement(join(<687834..688253,688310..688443, 688494..>688536)) /locus_tag="CAEBREN_20863" /product="hypothetical protein" /db_xref="WormBase:CBN20863" /db_xref="WormBase:WBGene00159588" CDS complement(join(687834..688253,688310..688443, 688494..688536)) /locus_tag="CAEBREN_20863" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54117.1" /db_xref="WormBase:CBN20863" /db_xref="WormBase:WBGene00159588" /translation="MKMLIGLGIFLMLLAPQTPASFVLNCTSTPQQIEDMEYGKNLDR KMFAHDFQVANMNQLKYSPALAKHASDFKSCADLKKQGATYRIDGYSNKKAFIAVKLY AEFLKIEKPLPQWIDEGYNPKQTSFVRCYISDLCTRSAWMIHDGEESEAAGEMMFFDI YGPWKYFSEGDIGHGPPGYMCRYGHKDGLCQEKGSKCV" gene <688926..>689774 /locus_tag="CAEBREN_31153" /db_xref="WormBase:WBGene00193118" mRNA <688926..>689774 /locus_tag="CAEBREN_31153" /product="hypothetical protein" /db_xref="WormBase:CBN31153" /db_xref="WormBase:WBGene00193118" CDS 688926..689774 /locus_tag="CAEBREN_31153" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54245.1" /db_xref="WormBase:CBN31153" /db_xref="WormBase:WBGene00193118" /translation="MDPPNLVVAEPKAKRRLTDTIMEVDSPSTRYVAYEDYAKLYEHV VKVTNLVNELRINLIESAAAKLGAKIADTCEPLADLSPIGNPVMVAPIFIDNDPFPAL STPSSNQIAATALKSIKVVKKASTNQPIDTLSIAKEAAKLLDKATRAVIERMPDDKTD SSQDAKDLALLQKVAAKHSLPMPTKVHRHPCSSLHRPLKVQFDNSSDRDSFVHGFHRI KNSDADLTSLSTKPRARRDLTMPELETLRASRKFVYEENKKAGESKYIMFDINYRINN KPRPFA" assembly_gap 690251..690438 /estimated_length=188 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <701872..>706733 /locus_tag="CAEBREN_03925" /db_xref="WormBase:WBGene00142650" mRNA join(<701872..702105,702559..702711,702758..702865, 702909..703281,703623..703710,703773..703934, 704279..704738,705412..705775,706462..>706733) /locus_tag="CAEBREN_03925" /product="hypothetical protein" /db_xref="WormBase:CBN03925" /db_xref="WormBase:WBGene00142650" CDS join(701872..702105,702559..702711,702758..702865, 702909..703281,703623..703710,703773..703934, 704279..704738,705412..705775,706462..706733) /locus_tag="CAEBREN_03925" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine-protein kinase domain), IPR001245 (Serine-threonine/tyrosine-protein kinase), IPR017442 (Serine/threonine-protein kinase-like domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54336.1" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="WormBase:CBN03925" /db_xref="WormBase:WBGene00142650" /translation="MSKRRPSATANGVSTASKMESGANSKDEEEEEEPKKKPKKEIPK QCFETNGKMKLKMLGHLRNPINHGEFSVEDEKQTKYILRLEPAKRGKLQFTNEIIVET AKLFTGNDKIPVIRSIEFGTSDKFVANYLLTSAYSLQVYELWKMANGIVTPGCCLNIA LQTLEAIQYIHQAGYIHRNIKPATFSIGHGDQETKIMLTDFRLARAHFEPGSNLKKVR PARPQVKYGGTARYASIAALKEQDQGRKDDLESWIYMVFELLDPEGGLSWKKIPRCNM LIKEKENFKANLLPNTYNKVPIEFKKLVDMCHAMSYDSAPDYPAFKEVIESYGKSKNL DMAFCDWAGKLNPTLMSTAIKQGNNKSTGNRCSGNDDFEFKKKPPARKIMKEGDIIKN GANIWKVVNLLGSGGFGDVYKVYNCAGEKSKTHYALKTESDEGKKAMLRLKVEVQVLM AIHEDRKTPRLVGERDPRDANIHFVDFVDRGKNDDLKCKFVVMSLVGPSLDDIRKKRG IKLDEGHTPFNIALQSLEAVQDLHYLGYLHRDIKPANFAVGFGPSEAMIFMLDFGIGR SYLDPVTKQHRAPRKSVKFLGTLRYASRACMKSVDQGRKDDIECWIYMMYDIFDPKGG LFWKNMKGRDKIAAAKDALFLGKVKERDGTDMSPDVPPGWRLILGYITSLRFQSPINY QTLIDLLEKTAREEGVSEKALRKTGGWVGHLNDKPKHPRFGDSESERESESSDED" gene complement(<707308..>712019) /locus_tag="CAEBREN_08091" /db_xref="WormBase:WBGene00146816" mRNA complement(join(<707308..707385,707585..707854, 707992..709983,710250..711131,711843..>712019)) /locus_tag="CAEBREN_08091" /product="hypothetical protein" /db_xref="WormBase:CBN08091" /db_xref="WormBase:WBGene00146816" CDS complement(join(707308..707385,707585..707854, 707992..709983,710250..711131,711843..712019)) /locus_tag="CAEBREN_08091" /note="contains similarity to Interpro domain IPR011989 (Armadillo-like helical)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54426.1" /db_xref="InterPro:IPR011989" /db_xref="WormBase:CBN08091" /db_xref="WormBase:WBGene00146816" /translation="MSSSDSDENETTIHRNPGSSSGGIYTQPKAGSSKRSNVRHDVSD ADDDDEPYARFRKDMDMEVDERITSLLASLHFEQKRDVVPTDEDDNKLRELHEKIFSL ITNEPDIIRRRRLKKALPASNCVREQVYYLRRKPTTPPASYYHRLNAALHTIVKESFG EEYRKVATVLGLVEALAEVLILEVHAFGIPENNSGEHRNIRKLIANALTNLTYGQILS KRRLCSYDGFVRCVVRIIIESPNITQVYAGLIRNLSWNADSGMSEALQPTVHALSVAA VYAHTHRYDVTATLSALWNLAGHSTENKRTICDTPNCLKVLANILSPDSRFTSLVDSA TGILKYVSQYLATNSTHLELRSLLITRMLTLLKSSSFTCVTNTLGAIAHLIAKDPHMQ QMIRQDVAAVQQLNVLRNSNRDDIRKAVKEVLNTLNQPCSHRYGDMSHSVGGASGMQM LSEPQLQMQTSHHAYHGTASPRLLSLRATRASPGKYIPQQMQVSTGPDQRSSSLPRHF AMQRNGFMMAQSYNQQMDQQMMYQMQQQLMLQTDDQMEHHQQIMYMQQQQQQFQQMQK LQMQQQMEPPPVPPVDDDLEIPTSTVMGTRSNSERSLGSMNPGSVNNTGGWNSTLDTA ANSSRALSPVSYTDIPASPTMCAQVFNLPTTTEQQQPNTTQYSSGSANTMTRSDGATT VPMDNLITPTYATLNPPVVPRKTPEEELDSPDEVLPGPTLGDPEEEEEGDYAIIGGAA QKTDDELLTRSIQSEMPTSSSTPKMKVSPRLNGFFSPTPKASPAWSHPHTSPIPKSTN QPTRSQEATDADRLLMESIMSEMPRIVSPRLDPERQRRSHSKNEEADRRDAIIASHEP SDQEGVRGSLHRMESLESQASSEDSFGVNASSTAAVETMRIEEDVDASLPMDCMDEEE DYDYTADHYDDYDEDYEDPDATQYDEGIDPQLTIDCSMISSGSGSSLQRKDTTMGSRD SGALATSTPKGSASALPGVRRASRVATNGRTRLPVPKTNGSLMKEKPAAASNRPRLPP KPTLLKEKHYPEEDSIENQTRDDTIYVNAPIVEAEQERIYMNALKQNQKKEELNRTSS PSSRSAIVSPYNYQKPPFTGRSNGEMNTEKSVTPNPKQMLVTIV" gene complement(<717457..>717746) /locus_tag="CAEBREN_25395" /db_xref="WormBase:WBGene00164120" mRNA complement(join(<717457..717622,717670..>717746)) /locus_tag="CAEBREN_25395" /product="hypothetical protein" /db_xref="WormBase:CBN25395" /db_xref="WormBase:WBGene00164120" CDS complement(join(717457..717622,717670..717746)) /locus_tag="CAEBREN_25395" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54214.1" /db_xref="WormBase:CBN25395" /db_xref="WormBase:WBGene00164120" /translation="MLLPQSEAFVTLHKRLQAVPALVSIDNSPYAPKVPPCRIDFPPL MLHFKAALARRQTEVRSRHRDLLSGVVTKMGSNKNI" gene <721594..>722373 /locus_tag="CAEBREN_19431" /db_xref="WormBase:WBGene00158156" mRNA join(<721594..721760,721805..722099,722161..>722373) /locus_tag="CAEBREN_19431" /product="hypothetical protein" /db_xref="WormBase:CBN19431" /db_xref="WormBase:WBGene00158156" CDS join(721594..721760,721805..722099,722161..722373) /locus_tag="CAEBREN_19431" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003140 (Phospholipase/carboxylesterase), IPR000801 (Putative esterase), IPR002925 (Dienelactone hydrolase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54137.1" /db_xref="InterPro:IPR000801" /db_xref="InterPro:IPR002925" /db_xref="InterPro:IPR003140" /db_xref="WormBase:CBN19431" /db_xref="WormBase:WBGene00158156" /translation="MSGGVSQGNPAVVKPRGEHKGTIIFLHGLGDQGHGWADAFKTEA NHENVKAICPHSADRAVTLNMGMRMPAWYDLYGLSANSREDDTGIQAAAQYVHQLIDA EIAAGIPANRIAVGGFSMGGALAIYAGLTYPQTLGGIVGLSSFFLQRDKLPGRYTANN GTPIFLGHGGQDQLVPVQIGQMSEQLIKKFNPNVQMHIYNSMQHSSCAEEMRDVKKFL SSTIAK" gene complement(<722399..>722927) /locus_tag="CAEBREN_25293" /db_xref="WormBase:WBGene00164018" mRNA complement(join(<722399..722531,722648..722723, 722771..>722927)) /locus_tag="CAEBREN_25293" /product="hypothetical protein" /db_xref="WormBase:CBN25293" /db_xref="WormBase:WBGene00164018" CDS complement(join(722399..722531,722648..722723, 722771..722927)) /locus_tag="CAEBREN_25293" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54450.1" /db_xref="WormBase:CBN25293" /db_xref="WormBase:WBGene00164018" /translation="MDSVPHTAVPPPPQKQYVASTYYPMPTEKHKSPEKKKKENNNEK RKKEPKVLGPNYRPQLTPEDLEYIKRSVQQRNERRAYMMAHRDETDDTLYELEVRMPE KDYTNRIEVTQQQQNSRVY" gene <726158..>728944 /locus_tag="CAEBREN_11672" /db_xref="WormBase:WBGene00150397" mRNA join(<726158..726373,726730..727533,727728..728529, 728622..>728944) /locus_tag="CAEBREN_11672" /product="hypothetical protein" /db_xref="WormBase:CBN11672" /db_xref="WormBase:WBGene00150397" CDS join(726158..726373,726730..727533,727728..728529, 728622..728944) /locus_tag="CAEBREN_11672" /note="contains similarity to Pfam domain PF00004; contains similarity to Interpro domains IPR003959 (ATPase, AAA-type, core), IPR003960 (ATPase, AAA-type, conserved site), IPR003593 (ATPase, AAA+ type, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54367.1" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR003959" /db_xref="InterPro:IPR003960" /db_xref="PFAM:PF00004" /db_xref="WormBase:CBN11672" /db_xref="WormBase:WBGene00150397" /translation="MSSAKKKPTLVACPRCSTKFLSKDSTRHDDFCAKPVEESEIACV RKGTLRGFNVTVDKQTSFLPPDAVGWEREHSVLISPQTMDALGLLARQPVRVIFEDIV FIGVVWPCKEVALLKTSIISTRIPRERMIILESCGSVEKVNRLGVTVETSLPLSSSLS GFLEAYLSHSYLQYGFPISLNYFGQKVIVTPEEPLEKKMERMDLESQTPTVIATAVNY KLQITNAPVDDSKKQKKNPTDLSNIGGSFTAKQVLEDYVISPIRSKQPPCSVLIWGLP GSGKTLLLKELASVLSGSVTYIGSCDRLVEICSTANVVILDLNEVEKENTKVNRALSK LLSNEKICVILSIRSSDSLDIGFRVRFPVEAEITVPTQDERLDILSRISDDFSSELRL EVARHTHGFTGGDLCSLLKASRYARGNTTLEKINDARKRIRPTGIRQFILEVPNVSWN DIGGNEELKLEIQQAVIWPQRHPEAFERFGIDPPAGILLYGPPGCSKTLIARALANEA KMNFLAVKGPELFSKWVGDSEKAIRDLFARARQVAPTIVFFDEIDAVGSSRGSEKSSG VSDRVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLRPGRLDRAIYVGLPCEATR KAILEMRTRKMKIDEESIIQKLVEKTSGYSGAELVAVCRTAAMFAMRENIEASVVQWK HFEEALSAVVSRTEAYLLEVYDDFKAGRTSNA" gene complement(<729941..>731176) /locus_tag="CAEBREN_26016" /db_xref="WormBase:WBGene00164741" mRNA complement(join(<729941..730256,730665..730936, 730994..>731176)) /locus_tag="CAEBREN_26016" /product="hypothetical protein" /db_xref="WormBase:CBN26016" /db_xref="WormBase:WBGene00164741" CDS complement(join(729941..730256,730665..730936, 730994..731176)) /locus_tag="CAEBREN_26016" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54169.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN26016" /db_xref="WormBase:WBGene00164741" /translation="MTAEFFKEILIEPELKELEILRLDKGRIDAECLDLVMEMAQSNR VLHIKGTKIPENYYHENAFKFHDIHYNNAEWVRIEHLFTLKNSYSVSLVQHKLTYRDL NTYIKFWIESDHDMVQNLVIGAGGVLQTESLFDGILALQGRRNRHTVYLVAANPTKQR KHQIMGVVLDSYRLRLFSWDKNEPIQFWAPEVKVLLTMNRKKELEGELEGIQNLLLTS QDQNMVKKKNEIAGELQNVSRELAGYNLVFRDGFYSYT" assembly_gap 732996..733005 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <734934..>735417 /locus_tag="CAEBREN_03120" /db_xref="WormBase:WBGene00141845" mRNA join(<734934..735034,735078..>735417) /locus_tag="CAEBREN_03120" /product="hypothetical protein" /db_xref="WormBase:CBN03120" /db_xref="WormBase:WBGene00141845" CDS join(734934..735034,735078..735417) /locus_tag="CAEBREN_03120" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54445.1" /db_xref="WormBase:CBN03120" /db_xref="WormBase:WBGene00141845" /translation="MVQNLSIRTVTVYPNERLFDGIVVLRARLAIYLVAANRTKQRRQ QILSINWYNGYLSLKSYDKDETFRLRGYSKVDDSWAQEYKFLQALNKKKELEGELEEI QDSLETSQDMIEKKNQISRELQIVSQELAGYNLVFRCGVFSKAF" gene <736134..>738613 /locus_tag="CAEBREN_22099" /db_xref="WormBase:WBGene00160824" mRNA join(<736134..736285,736580..736633,737252..737540, 737965..738227,738271..>738613) /locus_tag="CAEBREN_22099" /product="hypothetical protein" /db_xref="WormBase:CBN22099" /db_xref="WormBase:WBGene00160824" CDS join(736134..736285,736580..736633,737252..737540, 737965..738227,738271..738613) /locus_tag="CAEBREN_22099" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54134.1" /db_xref="WormBase:CBN22099" /db_xref="WormBase:WBGene00160824" /translation="MSGCYDLHQLYKLGLEGKRQRSAKRRKGFELLWLPVLARIEVIR SMDIDEIIYFQTTMRKIFPCKSGLVIDKTSSSFRKSVAILKHLQSIISFKSLCLHVNL KGMTAEFFKEILTEPSLRDFESLGLENGEIDAECLDLVMGMAQSNRNLHIKGTMIPRD YYHENAFKFHDIYYNDAEWVCIENLLTLKDSYSVNLGWNLLTQHDVNTFIKFWIDSDH DMIQSLSFRLLLAFRIERFFDDVVVLKGRPAIYLVVANPTKQRKRPILRITCPPNGML CLKSCFKDETFRLRGSLTDESWAPEYKVLMILNKKKELKGKLEEIQKLLETSQDQNMV ERKNEIARELENVSLELDSLSFVLRDGVYSYT" gene <740147..>741755 /locus_tag="CAEBREN_21706" /db_xref="WormBase:WBGene00160431" mRNA join(<740147..740329,741103..741371,741416..>741755) /locus_tag="CAEBREN_21706" /product="hypothetical protein" /db_xref="WormBase:CBN21706" /db_xref="WormBase:WBGene00160431" CDS join(740147..740329,741103..741371,741416..741755) /locus_tag="CAEBREN_21706" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54170.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN21706" /db_xref="WormBase:WBGene00160431" /translation="MTAEFFKEILTEPAIKDFGVLRLENGEIDAECLDLVMGMAQSNR ILHIKRTEIPRDYYHENACKFYDISYDDARWVRIENLLTLKDSYTVSLGSNLLTQRDL NTFIKYWIDSDHDMVASLSSFKSTIAFETERLFDGIVVLKRRRQASYVVAANPTKQRK RSILTINWNDGKFRLKSWDKDQTFRLWGSFEFKSWASEYKVLMVLNKKKELERELEEI QKLLETRQDQNVVKKKNEIERELQNVSQDVDSLYLELRDGVYSYI" gene <742492..>744036 /locus_tag="CAEBREN_17187" /db_xref="WormBase:WBGene00155912" mRNA join(<742492..742529,742783..742983,743029..743317, 743376..743653,743697..>744036) /locus_tag="CAEBREN_17187" /product="hypothetical protein" /db_xref="WormBase:CBN17187" /db_xref="WormBase:WBGene00155912" CDS join(742492..742529,742783..742983,743029..743317, 743376..743653,743697..744036) /locus_tag="CAEBREN_17187" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54414.1" /db_xref="WormBase:CBN17187" /db_xref="WormBase:WBGene00155912" /translation="MSKCSDLHEFCKQIMLSLCSRRTEVMISYAKVKCNSIELHINMC SSTLEIESRNHKMYHCGPDQRIKGSNKLAPPVFSRWIDKNFSSFQNCVSILKHLQNMI SFKSLILYVNLEFMTAQFFKEILTEPALRDFEFLSLDRGKIDAECLDLVMETAHSNRD LHINYTKVPENYHHKNAFKFYVCGYWDSRWVRVEDLFTLKDSFAVSLGRNKLSSSDVN TFLKFWMENDHDMVQRGILDFRTAGVLQTERLFDGILVLQGRRNHLIAYLVAANPTKQ RKHQIMGVVLETNRLRLYSWDKNEPIRFEENVYAESWAPEYKVLQALNQQKELEGKLE EIQNLLETSQDQNMVKKKNEIERDLQNVSQELAGYNLVFRDSVYSYE" gene <745864..>746636 /locus_tag="CAEBREN_06579" /db_xref="WormBase:WBGene00145304" mRNA join(<745864..745932,745982..746253,746297..>746636) /locus_tag="CAEBREN_06579" /product="hypothetical protein" /db_xref="WormBase:CBN06579" /db_xref="WormBase:WBGene00145304" CDS join(745864..745932,745982..746253,746297..746636) /locus_tag="CAEBREN_06579" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54326.1" /db_xref="WormBase:CBN06579" /db_xref="WormBase:WBGene00145304" /translation="MANSNRHLRIDNTKVPENYSHKNAFKFYVCSYWDARWVRIQDLF TLKNNDTVHLSWHELTYSDMNSYIKYWIDSDHDMVRIMKLYTEERIQPESLFDGIVVL KNPGIRGATYLVAANRTKQRKHQIMGVVWDDNRLRLYSWNKNEPIRFEENVYAESWAP EYEVLMVMNKKKELEGDLERIQNSLETNQDQNLVEKKNEISRELQNVSQKVAGYNLVF RDGVFSYE" assembly_gap 747918..748395 /estimated_length=478 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<751023..>752706) /locus_tag="CAEBREN_17114" /db_xref="WormBase:WBGene00155839" mRNA complement(join(<751023..751251,751304..751419, 751470..751524,751595..751721,752224..752639, 752684..>752706)) /locus_tag="CAEBREN_17114" /product="hypothetical protein" /db_xref="WormBase:CBN17114" /db_xref="WormBase:WBGene00155839" CDS complement(join(751023..751251,751304..751419, 751470..751524,751595..751721,752224..752639, 752684..752706)) /locus_tag="CAEBREN_17114" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54174.1" /db_xref="WormBase:CBN17114" /db_xref="WormBase:WBGene00155839" /translation="MSDLKEERRKAKEQDKNYLEFRVQEILHENKPRNKATNLKKFDD EFPKPKKKNKEMEFGELMHKYLILRPDGRFATWQGKLASKKKKQKPGVAEGKTGLMHK MASAAGVSTKQSKDAPPPPTRKVVKNYDNAVKKALIQQADADEDEKIDQKRLNEAHSY LPKDECDVKNKYTLNAIVDNKPFWLVGDPVVPEDEEEAYVDAEMLSTYCSNPTAGGYI HNPVERKSFFIWGPTPQLWNEMTHFQDKKLIIGNTLKSILESAADRRGIPKERVDKGH KPILKWCKKTRAIEYVMDSMPLEKTAIYEEKLQTVFKQKENQKKE" assembly_gap 753136..753652 /estimated_length=517 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<755080..>756555) /locus_tag="CAEBREN_08591" /db_xref="WormBase:WBGene00147316" mRNA complement(join(<755080..755234,755499..755807, 755936..756378,756464..>756555)) /locus_tag="CAEBREN_08591" /product="hypothetical protein" /db_xref="WormBase:CBN08591" /db_xref="WormBase:WBGene00147316" CDS complement(join(755080..755234,755499..755807, 755936..756378,756464..756555)) /locus_tag="CAEBREN_08591" /note="contains similarity to Pfam domain PF00561; contains similarity to Interpro domain IPR000073 (Alpha/beta hydrolase fold-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54225.1" /db_xref="InterPro:IPR000073" /db_xref="PFAM:PF00561" /db_xref="WormBase:CBN08591" /db_xref="WormBase:WBGene00147316" /translation="MSSGAPSGSSMSSTPGSPPPRAGGPNSVSFKDLCCLFCCPPFPS SIVSKLAFMPPEPSYTISENNKLVLIEGRAAWPHENVFLDTCVEMRVARTRRRNRVAC TMIRAIPDAHFTLLFSHGNAVDLGQMSSFLYGLGYHLQCNVFSYDYSGYGCSTGKPSE KNLYADITAAFELLKTEFGVPKEKIILYGQSIGTVPSVDLASREDLAALILHSPLMSG MRVAFPGTQTTWCCDAFPSIEKVPRVKCPTLVIHGTDDEVIDFSHGVSIYERCPASVE PLWVPGAGHNDVELHAAYLERLRSFIELEASAIRVTAPIHRAPANSSNSNASNGTA" gene <760239..>761182 /locus_tag="CAEBREN_17805" /db_xref="WormBase:WBGene00156530" mRNA join(<760239..760253,760299..760404,760460..760543, 760592..760948,760992..>761182) /locus_tag="CAEBREN_17805" /product="hypothetical protein" /db_xref="WormBase:CBN17805" /db_xref="WormBase:WBGene00156530" CDS join(760239..760253,760299..760404,760460..760543, 760592..760948,760992..761182) /locus_tag="CAEBREN_17805" /note="contains similarity to Pfam domain PF01873; contains similarity to Interpro domain IPR002735 (Translation initiation factor IF2/IF5)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54142.1" /db_xref="InterPro:IPR002735" /db_xref="PFAM:PF01873" /db_xref="WormBase:CBN17805" /db_xref="WormBase:WBGene00156530" /translation="MADDLVLDLGKKKKTKKVIKLDDEEGAPTENVADVAADGMEELN LGTKKKKRAPKGAEEIVEEKVPTLDIGIGAQNLIDAKGVWPDYTYEEALTLVFQVMKD KNPDFAGDKKKFAIKLPEVGRAGSKKTAFSNFLEICRLMKRQDKHVLQFLLAELGTTG SIDGSNCLIVKGRWQQKHFESVLRKYIKEYVMCHTCKSPETQLTKDTRLFFLQCNNCG SRCSVTAIKSGFKAVVGKRAAIRRATEATAGK" gene <762007..>763249 /locus_tag="CAEBREN_14538" /db_xref="WormBase:WBGene00153263" mRNA join(<762007..762076,762379..762761,762812..>763249) /locus_tag="CAEBREN_14538" /product="hypothetical protein" /db_xref="WormBase:CBN14538" /db_xref="WormBase:WBGene00153263" CDS join(762007..762076,762379..762761,762812..763249) /locus_tag="CAEBREN_14538" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54113.1" /db_xref="WormBase:CBN14538" /db_xref="WormBase:WBGene00153263" /translation="MRYNIPKFFLNEIAIVAPFHPLAVIEDLKNLPNYFIVPCVNSVE YSFRGKVDEFAKFITRSSTYQKQHARSLLKVFHHICAEMEKIEPMECEDIDRIVDFWI AAIGIFDGSEVSMNEIGEAAKLVEKTTRRFVLKRQPLFLKRFLRKIHDNEDGNIGLEP QIVATIITTFQRLAFGQRSSEYYEELGEFWTLCMKMKYNDVYLSTVFYSSCFALAQAQ AVFRVKKELCLEVYEKILKPMHQQIVDFVEMKKIEANKEMSDEQRMMMEQANIGATYF SILVCTYQNAEEKILEFTKS" gene <763754..>764887 /locus_tag="CAEBREN_19289" /db_xref="WormBase:WBGene00158014" mRNA join(<763754..763783,763920..764074,764119..764218, 764268..764711,764759..>764887) /locus_tag="CAEBREN_19289" /product="hypothetical protein" /db_xref="WormBase:CBN19289" /db_xref="WormBase:WBGene00158014" CDS join(763754..763783,763920..764074,764119..764218, 764268..764711,764759..764887) /locus_tag="CAEBREN_19289" /note="contains similarity to Pfam domain PF02167; contains similarity to Interpro domains IPR009056 (Cytochrome c domain), IPR002326 (Cytochrome c1), IPR021157 (Cytochrome c1, transmembrane anchor, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54360.1" /db_xref="InterPro:IPR002326" /db_xref="InterPro:IPR009056" /db_xref="InterPro:IPR021157" /db_xref="PFAM:PF02167" /db_xref="WormBase:CBN19289" /db_xref="WormBase:WBGene00158014" /translation="MQRAVVQGSKRGLALLAGATAASGMGLVYALENSVSASGDNVHP YALPWAHSGPFSSFDIASVRRGYEVYKQVCAACHSMKFIHYRHFVDTIMTEEEAKAEA ADALINDVDDKGAAIQRPGILTDKLPNPYPNKKAAAAANNGAAPPDLSLMALARHGGD DYVFSLLTGYLEAPAGVKVDDGKAYNPYFPGGIISMPQQLFDEGIEYKDGTPATMSQQ AKDVSAFMHWAAEPFHDTRKKWALKIAALIPFVAVVLIYGKRHIWSFTKSQKFLFKTV KGREPPKAQ" gene complement(<765551..>766923) /locus_tag="CAEBREN_19215" /db_xref="WormBase:WBGene00157940" mRNA complement(join(<765551..766304,766445..766623, 766665..766752,766802..>766923)) /locus_tag="CAEBREN_19215" /product="hypothetical protein" /db_xref="WormBase:CBN19215" /db_xref="WormBase:WBGene00157940" CDS complement(join(765551..766304,766445..766623, 766665..766752,766802..766923)) /locus_tag="CAEBREN_19215" /note="contains similarity to Pfam domain PF09752; contains similarity to Interpro domain IPR019149 (Protein of unknown function DUF2048)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54234.1" /db_xref="InterPro:IPR019149" /db_xref="PFAM:PF09752" /db_xref="WormBase:CBN19215" /db_xref="WormBase:WBGene00157940" /translation="MASFIPNLPSMARHVDLKFRSALVLSQLFTKSWGHPDVIKQMAK YRREVMSKRLVMNYVKELNPKIDIVKKITKNGVISYEGFFPSPHALLFPDHMPGNVGR AHFRAYLPEKPGPVCIHLAGTGDHSYFRRQYLLVEDMLKDGVGSILVQNPFYGDRKPP NQFRSSLENVTDLFVMGAALIAECNHLFNWSETLGYGPFAISGVSMGGFMAQLAGSNS LRPISIVPILAWTTASPSYTEGAIAPAVNYPLLQKQLEDPQYTEKIRKIPDQNWLEKM HEMTAKNGDTLAKNMMRILMDDFTSLEFYPTPLDTSLCHVFLAEQDQYVLRNQGTPTY EQLWPNVTVEMMPGYGHVTAYLWKHDLWRKRINELLKSQQQQQAKM" gene <767155..>767890 /locus_tag="CAEBREN_18114" /db_xref="WormBase:WBGene00156839" mRNA join(<767155..767169,767220..767323,767479..767631, 767755..>767890) /locus_tag="CAEBREN_18114" /product="hypothetical protein" /db_xref="WormBase:CBN18114" /db_xref="WormBase:WBGene00156839" CDS join(767155..767169,767220..767323,767479..767631, 767755..767890) /locus_tag="CAEBREN_18114" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54412.1" /db_xref="WormBase:CBN18114" /db_xref="WormBase:WBGene00156839" /translation="MKKNEEPYSVIVACDTVIEFNGEIIGKPTDPNDATETLKRLRNN THNVYTGMALHYHDADQYEEIIEKTIVHFGDVPDRVIDEYVQSGEPLKKAGSYGIGEF GAVFVSGIEGCMPNVVGLPLHRLHQALINKNIL" gene complement(<768706..>773419) /gene="Cbn-rskn-2" /locus_tag="CAEBREN_13302" /db_xref="WormBase:WBGene00152027" mRNA complement(join(<768706..768856,769331..769478, 769531..769807,770034..770142,770506..770627, 771177..771266,771315..771719,772112..772418, 772467..772613,772664..773061,773255..>773419)) /gene="Cbn-rskn-2" /locus_tag="CAEBREN_13302" /product="CBN-RSKN-2 protein" /db_xref="WormBase:WBGene00152027" CDS complement(join(768706..768856,769331..769478, 769531..769807,770034..770142,770506..770627, 771177..771266,771315..771719,772112..772418, 772467..772613,772664..773061,773255..773419)) /gene="Cbn-rskn-2" /locus_tag="CAEBREN_13302" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine-protein kinase domain), IPR017892 (Protein kinase, C-terminal), IPR008271 (Serine/threonine-protein kinase, active site), IPR001245 (Serine-threonine/tyrosine-protein kinase), IPR017442 (Serine/threonine-protein kinase-like domain), IPR000961 (AGC-kinase, C-terminal), IPR010440 (Lipopolysaccharide kinase), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /codon_start=1 /product="CBN-RSKN-2 protein" /protein_id="EGT54219.1" /db_xref="InterPro:IPR000961" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR010440" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR017892" /db_xref="InterPro:IPR020635" /db_xref="WormBase:CBN13302" /db_xref="WormBase:WBGene00152027" /translation="MEDLMMPEGEKVSMENFALLRVLGKGAYGKVFLVRKVGGKDHNT IYAMKVLRKTRVMTKQKTLEHTMAERQVLERLRGTPFLVNLFYAFQTDTKLHIVMEYV RGGELFTHLCSRGHFDLEAARFVIAELVVAIDSLHQRKVIYRDLKLENILLDEEGHVK LTDFGLSKLFLPGELDRANSYCGTIEYMSPEVINRPEGGYSDVVDWWSLGVISFELLT GCSPFTVDGGQNSSKDIAKRILTKKVPFPKTMDAEARDFIGCLLEKKLEKRLGYGGVE EIKTHKFMQNIDWEAAEKRELKPVIVPRIGHDLDTQFFSAEFTSQPPLYSPAESPLNA NTLFRGYSYVSPSVIFANDNVIGEELMAEDVNALLASSSFFAKYKLDKSETGLLGKGA FSVVRRCERVADGAQFAVKIVSQRFAVQAQREARILEMVQGHPNIVQLHDVHSDPLHF YLVMELLTGNELLERIRKLERFTESEAADIMRQLVSAVKYLHDKRIVHRDLKPENILF ESVDSNARLRLVDFGFARLLPNPMEQQLKSVQVLRKMTPCFTLQYAAPEVLDVGDSQP EYNEQCDLWSLGVVLFTMLSGQVPFHARSRQESATEIMQRICRAEFSFDGDAWTNVSS DAKNLITGLLTVDPKKRLSMQELTAHMWLKSSASMDTPLQTPSILPSSADETFNETLR AFLHANRDGFHLLDVTAAPLMKRRGIKRQSGDKDTTGISKSSRVTQFECLPEEQEMEM TSSTSRPNNLGMMNYREPNSGTIRETRGSDSS" assembly_gap 775590..775599 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <782986..>784986 /locus_tag="CAEBREN_19119" /db_xref="WormBase:WBGene00157844" mRNA join(<782986..783008,783055..783483,784492..784546, 784590..784705,784758..>784986) /locus_tag="CAEBREN_19119" /product="hypothetical protein" /db_xref="WormBase:CBN19119" /db_xref="WormBase:WBGene00157844" CDS join(782986..783008,783055..783483,784492..784546, 784590..784705,784758..784986) /locus_tag="CAEBREN_19119" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54164.1" /db_xref="WormBase:CBN19119" /db_xref="WormBase:WBGene00157844" /translation="MSDLKEERRKAKEQDKNYLEFRVQEILHENKPRNKATNLKKFDD EFPKPKKKNKEMEFGELMHKYLILRPDGRFATWQGKLASKKKKQKPGVAEGKTGLMHK MASAAGVSTKQSKDAPPAPTRKVVKNYDNAVKKALIQQADEEDGRPSAKVVPEDEEEA YVDAEMLSNYCSNPSAGGFIHNPVERKSFFIWGPTPQLWNEMTHFQDKKLIIGNTLKS ILESAADRRGIPKERVDKGHKPILKWCKKTRAIEYVMDSMPLEKTAIYEEKLQTVFKQ KENQKKE" gene <787257..>789231 /locus_tag="CAEBREN_29504" /db_xref="WormBase:WBGene00191469" mRNA join(<787257..787321,787807..787912,788605..788958, 789130..>789231) /locus_tag="CAEBREN_29504" /product="hypothetical protein" /db_xref="WormBase:CBN29504" /db_xref="WormBase:WBGene00191469" CDS join(787257..787321,787807..787912,788605..788958, 789130..789231) /locus_tag="CAEBREN_29504" /note="contains similarity to Pfam domain PF01284; contains similarity to Interpro domain IPR021128 (MARVEL-like domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54238.1" /db_xref="InterPro:IPR021128" /db_xref="PFAM:PF01284" /db_xref="WormBase:CBN29504" /db_xref="WormBase:WBGene00191469" /translation="MERREVYTTQQPDGTYVTTTTREQTKYKEQSVWSCARGPTDKNY CMGPLGLLRICQIFLCVVIVCLITSVFGPGPFKGVLFGQTILLTAASVAMLLTFIFLI AYFFTLHLTHLDFFCWREADLTFNIVCSILFVILSIVEAYYSTGSWSNNCNDIGSDGI IHNGCRIIYEWAFASFLTFLLAILYAATAWLSHQNRHSLHNRSRDELY" gene <794679..>796208 /locus_tag="CAEBREN_28274" /db_xref="WormBase:WBGene00190239" mRNA join(<794679..794786,794831..794918,795742..>796208) /locus_tag="CAEBREN_28274" /product="hypothetical protein" /db_xref="WormBase:CBN28274" /db_xref="WormBase:WBGene00190239" CDS join(794679..794786,794831..794918,795742..796208) /locus_tag="CAEBREN_28274" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54257.1" /db_xref="WormBase:CBN28274" /db_xref="WormBase:WBGene00190239" /translation="MPNPTTASSDLPTATRFLHIGNDVEIKLVSFVYYPMWFWVVIAA GFMFCTVSCAVWFFCAMYRLRKEKPCNHPVYEAKTIVNKDGEEKIDKTAAAKSEKHCK KVGALSEAESLAKSFKSVRSKKSTKSSRKSSKKSIKKSSKEPVDDNDDKPKTEENQDE KRDQDNGKSGKSKASRKSSRKDGGRDCVLDIEGEEVHQEESVFRKVRWSALSQIFNLI FV" gene complement(<801843..>803092) /locus_tag="CAEBREN_24457" /db_xref="WormBase:WBGene00163182" mRNA complement(join(<801843..802075,803002..>803092)) /locus_tag="CAEBREN_24457" /product="hypothetical protein" /db_xref="WormBase:CBN24457" /db_xref="WormBase:WBGene00163182" CDS complement(join(801843..802075,803002..803092)) /locus_tag="CAEBREN_24457" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54440.1" /db_xref="WormBase:CBN24457" /db_xref="WormBase:WBGene00163182" /translation="MELIDPDGRHITDYEEWHEKDRLAAELAVYGKPMLRPKAHSFIT TSPSSMPIRSGRRPIRPSSTPDNSMISESERQELKRDTKQRSSWKSFFELKPLVKKFG SSSKS" gene <820249..>823950 /locus_tag="CAEBREN_12980" /db_xref="WormBase:WBGene00151705" mRNA join(<820249..820269,820934..821377,821983..822342, 822685..822926,823854..>823950) /locus_tag="CAEBREN_12980" /product="hypothetical protein" /db_xref="WormBase:CBN12980" /db_xref="WormBase:WBGene00151705" CDS join(820249..820269,820934..821377,821983..822342, 822685..822926,823854..823950) /locus_tag="CAEBREN_12980" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003893 (Iroquois-class homeodomain protein), IPR008422 (Homeobox KN domain), IPR012287 (Homeodomain-related), IPR017970 (Homeobox, conserved site), IPR001356 (Homeobox)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54211.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR003893" /db_xref="InterPro:IPR008422" /db_xref="InterPro:IPR012287" /db_xref="InterPro:IPR017970" /db_xref="WormBase:CBN12980" /db_xref="WormBase:WBGene00151705" /translation="MMPHVSQDEPSSTAATPVPPPPPPPAEVLRGMLPPNLLGQFQLH PSMAAQFLQAQAAAAAQQQSLVFSGVPIFPPGIPADFKPELLMAGGGPAHLPFLAQHL YHPYGMDGMKKRNATREATAPLKDWLHNHKKNPYPSKQDKLALAMLTQMTLTQVSTWF ANARRRLKKENKMTWSPQNRRGDGNDDEDDDYDDDMNRPSSSTSMNSERKGESLFGKA HLASPTPSGGSGGSDDLLTPKKEQLSPIPTDDSESPKRKPKMWSIADVTSDDDSSKKD SPPSSDENQSSTPSGILFQNTMKKQMEIMARMDPNFFRQAMNPFMLQFLAAQSHQFPS MLVAPPQTTSPIEAGEQVKVSRSEFASGDIDSITSVLSHLVSSVPPRVETPVC" gene 821868..821939 /locus_tag="CAEBREN_27875" /pseudo /db_xref="WormBase:WBGene00188486" tRNA 821868..821939 /locus_tag="CAEBREN_27875" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN27875" /db_xref="WormBase:WBGene00188486" assembly_gap 824726..824735 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 828217..828328 /estimated_length=112 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<830217..>830291) /locus_tag="CAEBREN_02664" /db_xref="WormBase:WBGene00141389" mRNA complement(<830217..>830291) /locus_tag="CAEBREN_02664" /product="hypothetical protein" /db_xref="WormBase:CBN02664" /db_xref="WormBase:WBGene00141389" CDS complement(830217..830291) /locus_tag="CAEBREN_02664" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54243.1" /db_xref="WormBase:CBN02664" /db_xref="WormBase:WBGene00141389" /translation="MRLELSKSFQLMKCVKLQAEQPCS" gene <834395..>834844 /locus_tag="CAEBREN_16936" /db_xref="WormBase:WBGene00155661" mRNA join(<834395..834439,834611..>834844) /locus_tag="CAEBREN_16936" /product="hypothetical protein" /db_xref="WormBase:CBN16936" /db_xref="WormBase:WBGene00155661" CDS join(834395..834439,834611..834844) /locus_tag="CAEBREN_16936" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54452.1" /db_xref="WormBase:CBN16936" /db_xref="WormBase:WBGene00155661" /translation="MKLFLTILLLAALVSTASSAGNPLCLICQSGLDIPTNWYGAQTL LRVGCSKLGPISEPCSKLVTVADLNDSYAAMYPHLVTIKRVACDKYCV" assembly_gap 835477..835606 /estimated_length=130 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <836729..>837145 /locus_tag="CAEBREN_17057" /db_xref="WormBase:WBGene00155782" mRNA join(<836729..836770,836906..>837145) /locus_tag="CAEBREN_17057" /product="hypothetical protein" /db_xref="WormBase:CBN17057" /db_xref="WormBase:WBGene00155782" CDS join(836729..836770,836906..837145) /locus_tag="CAEBREN_17057" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54115.1" /db_xref="WormBase:CBN17057" /db_xref="WormBase:WBGene00155782" /translation="MKLFCILLLIAFCSTPTKADPPFCAVCSIFVGIPQTWPDLQQKL IDRCDSVLLSIAVYPCQMLIRNADLTDSYPKMLPFLYDLRMLGCKKFCW" gene complement(<837378..>850775) /gene="Cbn-ahr-1" /locus_tag="CAEBREN_01596" /db_xref="WormBase:WBGene00140321" mRNA complement(join(<837378..837542,838154..838206, 838253..838569,839252..839401,840059..840307, 840670..840768,840823..840929,842271..842344, 842395..842808,850742..>850775)) /gene="Cbn-ahr-1" /locus_tag="CAEBREN_01596" /product="CBN-AHR-1 protein" /db_xref="WormBase:WBGene00140321" CDS complement(join(837378..837542,838154..838206, 838253..838569,839252..839401,840059..840307, 840670..840768,840823..840929,842271..842344, 842395..842808,850742..850775)) /gene="Cbn-ahr-1" /locus_tag="CAEBREN_01596" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR013767 (PAS fold), IPR000014 (PAS), IPR013655 (PAS fold-3)" /codon_start=1 /product="CBN-AHR-1 protein" /protein_id="EGT54433.1" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR013655" /db_xref="InterPro:IPR013767" /db_xref="WormBase:CBN01596" /db_xref="WormBase:WBGene00140321" /translation="MPVNDVRETSNACLHNSQFLSSGFPMSTHSYSYQPHPPMPFSNK VPTIFDPRIGTPMLDPEESNFEEISLKSLGGFILVLNDNGEIYYASENVEGFLGFHQS DILHQPVFDLIHSEDREDIRQQLDTNFHIPTSSSASSSSTTFDIFAPQNSKYLERNVN ARFRCLLDNTCGFLRIDMRGKLMSLHGLPSSYVLGRSTSGPVLGMICVCTPFVPPSTS DLASEDMILKTKHQLDGTLVSMDSKVYEMLEIDDSDLPLSLYNIIHVEDAVCMAEAHK EVIKNGSSGLLVYRLISSKTHRPYYVQSSCRLICKNSKPESIGFTHRLLNEVEGVMLL EKRSSLKAKLLSFDDSFLQSPRNLQSTAALPLPVLLKDDQDGLEPSTSTALFSTLSIP PTTSPTKSSRRRKENPDAVPVPATIQVPPPPPPPHFEMQMFDPSWSHDTAWPQDVYNQ YPPVYPPPGVPGIVGYPEVPNIEYAATWQPTDIHMQMAPPNGFIPEIQKITPHPPLHH FVDYSTPSSSSSHHLHHHHHHHHLHHPLKQDNFHLISEVTNLLGT" gene 837624..837694 /locus_tag="CAEBREN_27758" /pseudo /db_xref="WormBase:WBGene00188369" tRNA 837624..837694 /locus_tag="CAEBREN_27758" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN27758" /db_xref="WormBase:WBGene00188369" gene complement(<851990..>854184) /gene="Cbn-set-32" /locus_tag="CAEBREN_10353" /db_xref="WormBase:WBGene00149078" mRNA complement(join(<851990..852145,852196..852318, 852662..853198,853246..853371,853418..853990, 854038..>854184)) /gene="Cbn-set-32" /locus_tag="CAEBREN_10353" /product="CBN-SET-32 protein" /db_xref="WormBase:WBGene00149078" CDS complement(join(851990..852145,852196..852318, 852662..853198,853246..853371,853418..853990, 854038..854184)) /gene="Cbn-set-32" /locus_tag="CAEBREN_10353" /note="contains similarity to Pfam domain PF00856; contains similarity to Interpro domain IPR001214 (SET domain)" /codon_start=1 /product="CBN-SET-32 protein" /protein_id="EGT54223.1" /db_xref="InterPro:IPR001214" /db_xref="PFAM:PF00856" /db_xref="WormBase:CBN10353" /db_xref="WormBase:WBGene00149078" /translation="MFLKLFFRKKKNYFRALRKQDHSTHKMENSDKFTDHYKPVLIRK VFTSREPPFNPELDFEKYTMSSIENRRAHILDTCEIVEEDEQRNKIDSHYAVEEKIHK DPELRQNVEIFPRAGGDTKLSSICGVLCTRAMLSQGRAKSAKLKKVEFEINDETRQSL LKYHPVYTPPKERILLMPNLTFNSKEVIPVYSDVPEENVDNIEIPDSLLFDYTDVNFV NPSAEKELSDAVKLANSDKLNVIRCNCCSEENIVPCYENQDCNCYLLNDLMQDHQKYK SEKTKFTTFDPIYLTGKEGLYGKHYGFSCSELCACKGNCTNNSLLIIEKKLFPLEVFR NDMNMGFSVRSSVLIPGGTPIMEFTGEICRYKNETSDYSYQITYPGDKDIIKLFDAVC FTDPYKKTLTKLHKRKWYIDPRYHGNVARMACHSCSANMELFRIFQKSLSPAHIRLVL VAMLDIYPGTPLTFDYGHDYVHQRFRDNCGCRSFVCANGEDADVYTKLTEKEFQDCYI ELDKHQWLEWDEKVYGAVWNERNKAKEAEMARSENEEDEHAVVLD" gene <854382..>855743 /locus_tag="CAEBREN_05750" /db_xref="WormBase:WBGene00144475" mRNA join(<854382..854448,854497..854798,854842..855066, 855113..855304,855345..>855743) /locus_tag="CAEBREN_05750" /product="hypothetical protein" /db_xref="WormBase:CBN05750" /db_xref="WormBase:WBGene00144475" CDS join(854382..854448,854497..854798,854842..855066, 855113..855304,855345..855743) /locus_tag="CAEBREN_05750" /note="contains similarity to Pfam domain PF00013; contains similarity to Interpro domains IPR018111 (K Homology, type 1, subgroup), IPR004087 (K Homology)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54399.1" /db_xref="InterPro:IPR004087" /db_xref="InterPro:IPR018111" /db_xref="PFAM:PF00013" /db_xref="WormBase:CBN05750" /db_xref="WormBase:WBGene00144475" /translation="MDGSVVMQQEIYIPQKLKAFMSEPHGAALVAAVEGQYNCSINVV NDVLSVGSIIAGVQADITHIEKILIDAWQKRDVQIVIREAALNASCTHACQTLLPRAY CAVVYFFSADIQRRSRCSDIIVQQFAAKVSIYGTEYSVNKARELMIECLTEHFGLLEI DIPEAQRTTRMGYGMATNTFNPQVPPPAVSTASFNMFPMGEPNAILTSTPTSPQKYDE PLMSFDNHLLFPSDFSVPPPQLPAVHDATISPPRTNNVEKVKQWIPTAEVGKILGNRA AMKKQIEGQFNCVITVHTEIYSPFGMTSVEIMAQNKEQCRGARDAVLLLMQSHEDKTT AAAASFTDSGINSPTSPSTQSPSTTPEKRGGPRPFHRSSFRDQPKVMLALTPRKVQSP NE" gene <856224..>857977 /locus_tag="CAEBREN_16360" /db_xref="WormBase:WBGene00155085" mRNA join(<856224..856311,857076..857140,857431..857532, 857585..>857977) /locus_tag="CAEBREN_16360" /product="hypothetical protein" /db_xref="WormBase:CBN16360" /db_xref="WormBase:WBGene00155085" CDS join(856224..856311,857076..857140,857431..857532, 857585..857977) /locus_tag="CAEBREN_16360" /note="contains similarity to Pfam domain PF03073; contains similarity to Interpro domain IPR004307 (TspO/MBR-related protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54442.1" /db_xref="InterPro:IPR004307" /db_xref="PFAM:PF03073" /db_xref="WormBase:CBN16360" /db_xref="WormBase:WBGene00155085" /translation="MSTGDHRGEFERNWRQVHQPHSDAREAFREFVDKEHCQLAAYET MPFWTTQDTRNAVISSLVPAGAAVAAFASFAKDQQAADWWSALKKPNWAPKDVRLYSA VDLITLSPLGYASYLVYKNGGGFDYNDTKLALGLYGTSLAVALATIPIVKKKELGCLW KNTTVVSLTAAGAAYAFYKIDKKAGFLLVPFALWSAFYAYLAYSIKKENDPIKDL" gene <858331..>859118 /locus_tag="CAEBREN_32721" /db_xref="WormBase:WBGene00194838" mRNA join(<858331..858354,858399..858476,858528..858584, 858631..858862,858907..>859118) /locus_tag="CAEBREN_32721" /product="hypothetical protein" /db_xref="WormBase:CBN32721" /db_xref="WormBase:WBGene00194838" CDS join(858331..858354,858399..858476,858528..858584, 858631..858862,858907..859118) /locus_tag="CAEBREN_32721" /note="contains similarity to Pfam domain PF06003; contains similarity to Interpro domains IPR010304 (Survival motor neuron), IPR002999 (Tudor domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54429.1" /db_xref="InterPro:IPR002999" /db_xref="InterPro:IPR010304" /db_xref="PFAM:PF06003" /db_xref="WormBase:CBN32721" /db_xref="WormBase:WBGene00194838" /translation="MSNLWSTNTAMNAEDVWDDSALIQMYEESLREVNRSAGVTEKTF TDAEGKTTTWKVGGNCMAPFEENGDKSYYPAKINSFGGTDNLEVEVTFYFYGNKAVVQ MEELWIEEAAIAEAVAADEAEKSKATNTNTRASSTQQPSTSTATPSLPEMVPVPPDVL NMAPPANVEEATNSALMSWYMAGYHSGYLKGMQHAQNSRH" gene complement(<859593..>863778) /locus_tag="CAEBREN_08447" /db_xref="WormBase:WBGene00147172" mRNA complement(join(<859593..859700,859750..860919, 860974..861247,861307..862752,862803..863104, 863151..863232,863279..863536,863591..>863778)) /locus_tag="CAEBREN_08447" /product="hypothetical protein" /db_xref="WormBase:CBN08447" /db_xref="WormBase:WBGene00147172" CDS complement(join(859593..859700,859750..860919, 860974..861247,861307..862752,862803..863104, 863151..863232,863279..863536,863591..863778)) /locus_tag="CAEBREN_08447" /note="contains similarity to Pfam domain PF00443; contains similarity to Interpro domains IPR001394 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2), IPR018200 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54145.1" /db_xref="InterPro:IPR001394" /db_xref="InterPro:IPR018200" /db_xref="PFAM:PF00443" /db_xref="WormBase:CBN08447" /db_xref="WormBase:WBGene00147172" /translation="MSKENGGKKPKEKPNSRKLAFRQEAVDALKALSDDEVTFAKAMV VAKLDCKKCGLHSTTHNPKSTNCRDNPFCLGRLGWMSIDKLITKEQENKEEAKKDQKR RDLNDQPAGLINAGNFCYVNSFLQVWFNVPEFRQLIYDFRPSPDFNPPPAPRMDVERA MMILQDIFYTLQTTPFPDTDKTSLLVKVLRLNSEQQDSQEFGTKLFNALERCLPEHPN GSDAEKRMRNLFTGATADRIVCQCGQRSEKEIPAISIQLNIEGYTTLLDALDANFREE KLDDFKCSECNEKGNATKQTDYIKLPPVLIIQLNRYKYTAKGRQKLKTPLAYPREIPA KAFQRVDQSNPPPAAMYDLFAVTIHEGSNADCGHYYDLIKSPYNSKWYRYNDETVEAL AKPPGTEKPTSAKTDKSKKKDKEKWPVDQKACYGLFYRRRDAVQPLPLPTMPPEELTI DTKNQIEELFEGLTKKKIEKSEKRLYDLERRSNKLQTTFNKLETHVGKYQNPNDIAFL PTSLITDILNQEYEVAKGEKKKKKKEKTESEETKKTTTTEEEDIAAAIALSEADQREK ASSSEPSTSAAADTADEIEEDEERSSNETPINQPSAADEMLEAEELMETDTTPTKEID ILAIAMEESALPTVETPELKKRTRQQNGDVKYVYTTRSPRKSASAPNTTTPSASPQKQ PVSTRVAALLSSHEIPICGHGKMSIDPILFGDVKAVARAPAISMLREYDYRVKLVYDN GEKVYPPPQKDREIFIFTAADICMECVEEMRKEGIFNDRLEDDERMVRKILKEEKTRC SVKCPERRPEGHVYVAKFALSNFRKSALANRENKLAQSHPLKGTLHIDSVTTQKEDSE WPSVASLKRSRTKQRKSVSEVPEKLQKLDEEGMQEAAEITPEEDEESSVQDVSPLDQQ NPTRPVDTFDPEKAKTTESVEFNSELRCAHGSINFNQFRHSVSPEEWGRLKFYFDDCF EVKCTEPVCEECRQMEVDAQHGTENMRQMVREMRKRINDTLRNIEARSDSKKEYDEDI KYGICSVFLDKLKKLTNRQALPPTICQECLLCQHQLPFKGFLNDDNHKESHIVGMTEE EWNTFIDEIRKLEVAGADEHVVFTEPQVIHIENGQIRDMCERCYEQHIKFTEEQKYMF ENENIYVKLVNPNDEEDVAKANGKSRRGRAKNSYAIKMSSSNKLLELKVQLYDKTHQL PNDQLLYRTVGGEHFDVSNNQKTLFDLRIAPNNNDNPLILIAQQFSPSASTNEETGDR APERGFVDTALAH" gene <864194..>865122 /locus_tag="CAEBREN_01509" /db_xref="WormBase:WBGene00140234" mRNA join(<864194..864267,864316..864381,864430..864578, 864626..864783,864979..>865122) /locus_tag="CAEBREN_01509" /product="hypothetical protein" /db_xref="WormBase:CBN01509" /db_xref="WormBase:WBGene00140234" CDS join(864194..864267,864316..864381,864430..864578, 864626..864783,864979..865122) /locus_tag="CAEBREN_01509" /note="contains similarity to Pfam domain PF04900; contains similarity to Interpro domains IPR006984 (Protein of unknown function DUF652), IPR006596 (Nucleotide binding protein, PINc)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54350.1" /db_xref="InterPro:IPR006596" /db_xref="InterPro:IPR006984" /db_xref="PFAM:PF04900" /db_xref="WormBase:CBN01509" /db_xref="WormBase:WBGene00140234" /translation="MGKRLKSNARKSAVNKLVKKTDNRIKEEQRVIRTPKEDEQALKL VHAPKISSAMFMKYNTQLGPPFHVIVDTNFVNFAVKNRIDMFQGLMDCLYAKTIVYAT DCVLAELEKVRKFKIALKVLKDPRVQRLKCEHKGTYADDCLVQRVTQHKCYIVATCDR DLKRRIRKIPGVPIMYIVNHRFSIERMPDAYGAPMN" gene complement(<865436..>867731) /gene="Cbn-stn-1" /locus_tag="CAEBREN_19306" /db_xref="WormBase:WBGene00158031" mRNA complement(join(<865436..866384,866636..866757, 867636..>867731)) /gene="Cbn-stn-1" /locus_tag="CAEBREN_19306" /product="CBN-STN-1 protein" /db_xref="WormBase:WBGene00158031" CDS complement(join(865436..866384,866636..866757, 867636..867731)) /gene="Cbn-stn-1" /locus_tag="CAEBREN_19306" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001849 (Pleckstrin homology), IPR011993 (Pleckstrin homology-type), IPR001478 (PDZ/DHR/GLGF), IPR015482 (Syntrophin)" /codon_start=1 /product="CBN-STN-1 protein" /protein_id="EGT54296.1" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR011993" /db_xref="InterPro:IPR015482" /db_xref="WormBase:CBN19306" /db_xref="WormBase:WBGene00158031" /translation="MAAVRSGLVDIFVQGQWHRVLATLDPTAITLQTMEQNEVEAEKR TVRVVKYDGNGLGISIKGGRDNNMPIVISKIFKGMAADQTGELFLDDVIISVNGESLL DASHEEAVRALKRAGRVVDLQVQYRREDMMHRENIVENVEWDDDIRERVRTIGLKLAY VARAGIDADAEGRILEMRSPSGRYSLAMRCSSSDEADGWFEALHACTTCLLTQALAQV NIMLGNNPQVRHMGWVAEQVSENGISMWKPKFMTLTNSEILFYEAVPQLKAEWAEPRL VRPLVATRVVQTSSRSAPVIKGLTDVISFRMRTGTQQGVRTHTIRVETHAELARWVRA IVIGGYEACLATSQVSAPCLWRGESCELIVNLDNGISLLSSSGEVRMASKNRKT" gene <871513..>872997 /locus_tag="CAEBREN_11202" /db_xref="WormBase:WBGene00149927" mRNA join(<871513..871539,871613..871736,871898..872453, 872609..872774,872825..872905,872953..>872997) /locus_tag="CAEBREN_11202" /product="hypothetical protein" /db_xref="WormBase:CBN11202" /db_xref="WormBase:WBGene00149927" CDS join(871513..871539,871613..871736,871898..872453, 872609..872774,872825..872905,872953..872997) /locus_tag="CAEBREN_11202" /note="contains similarity to Pfam domain PF03770; contains similarity to Interpro domain IPR005522 (Inositol polyphosphate kinase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54278.1" /db_xref="InterPro:IPR005522" /db_xref="PFAM:PF03770" /db_xref="WormBase:CBN11202" /db_xref="WormBase:WBGene00149927" /translation="MELTAFRHQVGGHFGILSCNGHVAKPSNLREMAFYKVMNSELKH FSPAFCKEVDVRASVNPVTGQIIVEALEKLDCHKKKSSSKHERSSTGFRQNTDGHVTV DTEKQWNPWAAECQCKVVERMLKEPDPTPFLLLENVVAHYTRPCVLDLKIGTRQHGDD ASESKRHRQLMKCRHSTSATLGVRVVGMQLYEAETKSYSYVEKQEGRRIDAAGFRGYV KRFIKCCGRSRAARIRQKLSKLRSLLAEFEGYRFFSASILIAFDAEAADSSSDDAVKV CIIDFAHSTFSGFFEDLAYSGADEGCLLGLDSIVEAMEPNVPKDPSSQMSSYEKKI" gene complement(<873440..>875652) /locus_tag="CAEBREN_24243" /db_xref="WormBase:WBGene00162968" mRNA complement(join(<873440..873549,873595..873918, 874091..874401,874448..874807,874929..875463, 875517..>875652)) /locus_tag="CAEBREN_24243" /product="hypothetical protein" /db_xref="WormBase:CBN24243" /db_xref="WormBase:WBGene00162968" CDS complement(join(873440..873549,873595..873918, 874091..874401,874448..874807,874929..875463, 875517..875652)) /locus_tag="CAEBREN_24243" /note="contains similarity to Pfam domain PF02383; contains similarity to Interpro domain IPR002013 (Synaptojanin, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54118.1" /db_xref="InterPro:IPR002013" /db_xref="PFAM:PF02383" /db_xref="WormBase:CBN24243" /db_xref="WormBase:WBGene00162968" /translation="MDIYESFNLYSHPEKFYLEPTDLGGGAASKHYLEIDRHTNVMRI IDSRKQRVPIADTDIKFIYGILGTIKLVSGHALIVITKASFIGQVNNHNIWNIVDTEV IPYKKTTLHLSEKQIRYNRLFSDMLTNFLAAGGFYYSHTLDISRTFQWLQENAVPLFK TRSMMDRASERFVWNGYLMSQIRQVPGAERYTLPVIHGFIGQNRVNVNGKEIKLTIIS RRSIYRAGVRFYKRGVDAEGHAANFVETEQIVELDGPDKSLTSFVQIRGSIPLLWAQR PNLRWQPMPTMKPTDDQLAAFIKSFSWHKQHYGGKHIIVNLVNQKGREKKVGGELERI ARQANLEFVRYHQFDFHKECHAMQWHKIDLLREQLSQEISHFGYFYLSPNGADSNRFQ RGFFRTNCMDCLDRTNVVQSMLARESLTEQLRMLGVLYPEQKVQDIPLLENLFKHLWA DNGDECSRQYAGTGALKADFTRLGKRTYLGAMNDGVNAVSRYVRNNFGDGYRQDAIDL FLGNFQVDSSDLPSSLETSILSTDQNGLALIAALFAMSMTILCLLVADNATATIFWMI IFFVCMMFIFLNGEEFVNVPKLKLD" gene <876346..>877455 /locus_tag="CAEBREN_04040" /db_xref="WormBase:WBGene00142765" mRNA join(<876346..876392,876436..876730,876777..877084, 877134..>877455) /locus_tag="CAEBREN_04040" /product="hypothetical protein" /db_xref="WormBase:CBN04040" /db_xref="WormBase:WBGene00142765" CDS join(876346..876392,876436..876730,876777..877084, 877134..877455) /locus_tag="CAEBREN_04040" /note="contains similarity to Pfam domain PF01145; contains similarity to Interpro domains IPR001107 (Band 7 protein), IPR001972 (Stomatin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54406.1" /db_xref="InterPro:IPR001107" /db_xref="InterPro:IPR001972" /db_xref="PFAM:PF01145" /db_xref="WormBase:CBN04040" /db_xref="WormBase:WBGene00142765" /translation="MALTNRFLLNSSALLRSSTLLLAVTSSRQAHAAHNTVINFVPQQ EAWVVERMGKFYKILEPGLNFLLPVIDKIKFVQNLREIAIEIPEQGAITIDNVQLRLD GVLYLRVFDPYKASYGVDDPEFAVTQLAQTTMRSEVGKINLDTVFKEREQLNENIVYA INKASAPWGIQCMRYEIRDMHMPSKIQEAMQMQVEAERKKRAAILESEGIREAAINRA EGDKKSAILASEAIQAERINVARGEAEAVLLKAESRAKAIERIAMALEKEGGQNAAGL TVAEQYVGAFGNLAKESNTVVLPANLSDPGSMVSQALAVYDSLSKKK" gene complement(<877930..>881450) /locus_tag="CAEBREN_25499" /db_xref="WormBase:WBGene00164224" mRNA complement(join(<877930..878089,878135..878325, 878375..879323,879374..879898,879959..881008, 881057..881267,881315..>881450)) /locus_tag="CAEBREN_25499" /product="hypothetical protein" /db_xref="WormBase:CBN25499" /db_xref="WormBase:WBGene00164224" CDS complement(join(877930..878089,878135..878325, 878375..879323,879374..879898,879959..881008, 881057..881267,881315..881450)) /locus_tag="CAEBREN_25499" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003165 (Stem cell self-renewal protein Piwi), IPR003100 (Argonaute/Dicer protein, PAZ), IPR006162 (Phosphopantetheine attachment site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54330.1" /db_xref="InterPro:IPR003100" /db_xref="InterPro:IPR003165" /db_xref="InterPro:IPR006162" /db_xref="WormBase:CBN25499" /db_xref="WormBase:WBGene00164224" /translation="MSDPLDTIMGSMSNSGSRSSSSASGRIPKRDHHTNERDEPSSKR SAPSFATPNSTTPVGRDSFANMGEMDVQMNMFSLDLSKMPSQLQRLHVDTLIKSTNGK EYNLNLGVVAVSGDVNSHNRRLSQHLLMRKFAEKKRSLFSNQSYHHLAYDCAAALYVP LGIYIGIEGDVEEVALTKDDFSSEEWAIVSKICRRKDDTFIIQVKPAGYVNTQGDAAI EDSNRLELTRCVEIVTSQMLNSSDFYQFGNATFPLNVHPNSEPDGTSEIRPGFAKVAR LVEGRGGKNEMFITIDTKLSPFYKDISVLKFVCCKYQEFRGIGSGGFGGGGRGGYGGG RGGYGGGRSDSRDSRGGYGGYRSDSRDSRGSYGGRSDSRDSRGGRDYRDESRGRRDSY DSRDSRRGSSGDCDGTDYSSQDVTEIEKFVANGGHKFVSTLDNALKGLFAMPTHLKNT ASQVRITGVREFTANNTRFVKKDEKGEREISVYDYFYEEYNIKLKFPELPLVVSKRFK HECFYPMEVLRIIPGQRIKVQKMTANVQSAMTGRNASMPRQHVELVQNILHDSLRLQK NPFMEAFGIQLESTRPVQLRAKLLPPAQIRFKNQSYMPDMSRPQFRTQAKFVDPANIH RVALVSFDRALDMRLAEDFCDQLYNYCRDNGINVERPSKDWSIREMNSGDCVAIKEVM EGWMKKGVDILVGVAREKKPDVHDVLKYYEESVGMQTIQLCKQTVDKMMNAQGGRQTI DNVMRKFNLKCGGTNFHVEIPNNVRGKSVCSNTETLTKKLLDGVQFIGFEISHGAART LYDKSRGQMDGEPSIVGVSYSLTNSTQLGGFSYMQTQKEYKLQKLDEHFPMCVKMYGE HAKRLPSRIVIYRVGAGEGDFKRVKEEVEEIRKTFDKVQQGYNPQLVVIIAQRASHAR VFPLRIEGHKAGEQNVPSGTCIDNVVTAFGYDEFILSSQSPLIGTVRPCKYTILVNDA GWSKNEIIHLTYFRAFGHQVSYQPPSVPDVLYAAENLAKRGRNNYKVHQRNVSCQAIE RRIIAEHSEYINEDMQEELASKIVDFMSEAMNGMTIRKRNFWA" gene <882333..>884505 /locus_tag="CAEBREN_16535" /db_xref="WormBase:WBGene00155260" mRNA join(<882333..882615,882891..883129,883176..883652, 883705..884014,884306..>884505) /locus_tag="CAEBREN_16535" /product="hypothetical protein" /db_xref="WormBase:CBN16535" /db_xref="WormBase:WBGene00155260" CDS join(882333..882615,882891..883129,883176..883652, 883705..884014,884306..884505) /locus_tag="CAEBREN_16535" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019429 (7TM GPCR, serpentine chemoreceptor Sri), IPR019422 (7TM GPCR, serpentine chemoreceptor Srh), IPR019428 (7TM GPCR, serpentine receptor class r (Str), Nematode)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54188.1" /db_xref="InterPro:IPR019422" /db_xref="InterPro:IPR019428" /db_xref="InterPro:IPR019429" /db_xref="WormBase:CBN16535" /db_xref="WormBase:WBGene00155260" /translation="MNDYFLTNYSNCRSSTSYFASSEYVSTGVHIITAISIPFSIYGF YCILKVTPKQLSGVKWVLLNFYTWTVVTDWVFNVLSIPYMFLPSVSGIMLGLISRIFS LERAFLPPSMHLRAAVSLLENRQNLLETKWRIRRDWIRWVVNFFNHTIAIVAVVPPYL ENFDMDEMRMEILETMIPCPTKEFFDPNLFIPFSIYGFYCILKVTPKQLSGVKWVLLN FYTWTVVTDWVFNVLSIPYMFLPSFSGVMLGYGQYLKIPPSVLIYSIQALVAVFSASA VSLFENRQNLLETKWKIRRDWIRWILNIFNYTFAFVAVIPPYLEIFDIKEMAMEILKN VIPCPPREFFDPSLFFLTNKPLLATSLMAIQILVYTPQFLFCTVHTWYHLVFSHTSKV SPETRKMQRRFFIGSFLQVGIPMTLFSVPIFYIWFSVNTGFYSQELNNHIVLIVSMHG TLGTICMLFIHNHYRTHFVKMITFGRVDLSKESSAVAPLIHSVRGNLGKRAV" gene <884804..>885652 /locus_tag="CAEBREN_16809" /db_xref="WormBase:WBGene00155534" mRNA <884804..>885652 /locus_tag="CAEBREN_16809" /product="hypothetical protein" /db_xref="WormBase:CBN16809" /db_xref="WormBase:WBGene00155534" CDS 884804..885652 /locus_tag="CAEBREN_16809" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019429 (7TM GPCR, serpentine chemoreceptor Sri), IPR019422 (7TM GPCR, serpentine chemoreceptor Srh)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54345.1" /db_xref="InterPro:IPR019422" /db_xref="InterPro:IPR019429" /db_xref="WormBase:CBN16809" /db_xref="WormBase:WBGene00155534" /translation="MSRLSNCSTTPTSYFASSEFVLKSVYLVTVITLPFIIYGFYCIL KVTPKHLIGTKWVLLNIHIWTTVVVVIMNVLSIPFVFFPAASGVMLGYGENLGVPPLV LTYSIQSLLGVFISAGIALLENRQNLLDTKLKIRETWQRVFMNFLNCSVAFMAIIPLY FENINNEEMIENVLEVIPCPANEFFTSRVFFVSRKPLLMTILMGIKLFVYSPQIIFYN IHTWYHLVYAQGSKVSPETRKMQYRFFIGSFYQMSVPVALFLGPVLYIGYSINTGYYN QGSRQS" gene complement(<887944..>888770) /locus_tag="CAEBREN_05009" /db_xref="WormBase:WBGene00143734" mRNA complement(join(<887944..888601,888652..>888770)) /locus_tag="CAEBREN_05009" /product="hypothetical protein" /db_xref="WormBase:CBN05009" /db_xref="WormBase:WBGene00143734" CDS complement(join(887944..888601,888652..888770)) /locus_tag="CAEBREN_05009" /note="contains similarity to Pfam domain PF00646; contains similarity to Interpro domain IPR001810 (F-box domain, cyclin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54298.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CBN05009" /db_xref="WormBase:WBGene00143734" /translation="MEELASVFQNKVSINSKPNFSDLPLELIEKIVKEADLPSRLVLR KVSKYLRELVKKQEPRYKSVGIVINSNCIQLDLEGVLINYTITKNRNCAVGIPGREPK QFYKENIYVMFDDLMTFMSNRSFYVEHLKITTTDDASYEMFTYLQRKFLRSKTVNSLW VKVNVNQSWKRVSNFIDRRKTQKFECHWLEEESSGWFTECKQVLVLDGDNYVGEESYV IVPKHIRFLQKAENDWQYANARRPENVVKWEVSWPKDRLI" assembly_gap 890220..890380 /estimated_length=161 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<890993..>891828) /locus_tag="CAEBREN_15733" /db_xref="WormBase:WBGene00154458" mRNA complement(join(<890993..891659,891710..>891828)) /locus_tag="CAEBREN_15733" /product="hypothetical protein" /db_xref="WormBase:CBN15733" /db_xref="WormBase:WBGene00154458" CDS complement(join(890993..891659,891710..891828)) /locus_tag="CAEBREN_15733" /note="contains similarity to Pfam domain PF00646; contains similarity to Interpro domain IPR001810 (F-box domain, cyclin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54129.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CBN15733" /db_xref="WormBase:WBGene00154458" /translation="MEELASGFQNKVSIHSKPNFSDLPLELIEKIVKEADLPCRLALR KVSVYLRALVDKQTPKYKHIGIVINSNCIQLDLEGILINYTSTENRNCTIEVPGKKPK KMYKDNIYVMFDDLMTFMSKPSFYVEHLKITTTDDASYEMFTYLQRKFLRSKIEVNSL WIKVNMDQELRKVSDFIDRSKVQKSECHWLEEESRWNLRECMELVVREGDNFVGEESY VISRKDDLPWMKKYGKKKKEYEESLQPSEVVKWDVHVPKELYI" assembly_gap 892314..892323 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<893183..>893985) /locus_tag="CAEBREN_00387" /db_xref="WormBase:WBGene00139112" mRNA complement(join(<893183..893849,893900..>893985)) /locus_tag="CAEBREN_00387" /product="hypothetical protein" /db_xref="WormBase:CBN00387" /db_xref="WormBase:WBGene00139112" CDS complement(join(893183..893849,893900..893985)) /locus_tag="CAEBREN_00387" /note="contains similarity to Pfam domain PF00646; contains similarity to Interpro domain IPR001810 (F-box domain, cyclin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54293.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CBN00387" /db_xref="WormBase:WBGene00139112" /translation="MEEHSKPNFSDLPLELVGKIVKETDLPGRLVLRKVSKYLRALVD KQTPRYKHIEIVVNSKCIQLDLEGILINYTNMKYDNCTVGIPGRKPKKVNRDNMDVMF DDLMTFMSNRSFYVEHLKITTTDDASYKKFIILHPKLLRSKIEVNSLWIKVNMDQELR KVSDFIDRSKVQKSECHWLEEESRWNLRECMELVVREGNNFVGEESYVISRKDDLPWM KKYGKKKKEYEESLQPSDVVKREVHVPKELYI" gene complement(<894546..>895390) /locus_tag="CAEBREN_19023" /db_xref="WormBase:WBGene00157748" mRNA complement(join(<894546..895215,895266..>895390)) /locus_tag="CAEBREN_19023" /product="hypothetical protein" /db_xref="WormBase:CBN19023" /db_xref="WormBase:WBGene00157748" CDS complement(join(894546..895215,895266..895390)) /locus_tag="CAEBREN_19023" /note="contains similarity to Pfam domain PF00646; contains similarity to Interpro domain IPR001810 (F-box domain, cyclin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54371.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CBN19023" /db_xref="WormBase:WBGene00157748" /translation="MPMEEFSLVFQNKVSINSKPNFSDLPLELVGKIVKEADLPSRLV LRKVSKYLRELVDKQKPRYKNIGIEINSKGIQLDLEGVLINYGINDNICTIGIPGYKP KKRYRNYMYVMFDDLMTFMSNPSFYVENLRLTFTDERSYQKFVTMYPKRFPSSKIEVH SLFINQNANGNFKTATNFIDRSKLHKIERHWLEEEDSWQCRECKEVLVRDGDNFVGEE SYFTIWENDFASIKKYGKKKMLDDEESLRTSEVVKWDVHWPKDFYI" gene <896681..>898884 /locus_tag="CAEBREN_13214" /db_xref="WormBase:WBGene00151939" mRNA join(<896681..896713,897018..897124,897168..897633, 897943..898096,898142..898287,898450..898488, 898783..>898884) /locus_tag="CAEBREN_13214" /product="hypothetical protein" /db_xref="WormBase:CBN13214" /db_xref="WormBase:WBGene00151939" CDS join(896681..896713,897018..897124,897168..897633, 897943..898096,898142..898287,898450..898488, 898783..898884) /locus_tag="CAEBREN_13214" /note="contains similarity to Pfam domain PF02485; contains similarity to Interpro domain IPR003406 (Glycosyl transferase, family 14)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54453.1" /db_xref="InterPro:IPR003406" /db_xref="PFAM:PF02485" /db_xref="WormBase:CBN13214" /db_xref="WormBase:WBGene00151939" /translation="MRNIKYYRLDDRSSSRDKANYPSPSFSKDQRVSKRNVTKFQDNY FLIEESQFLNCPAFMNGNKEEIETYVNYGRMKLHSEKLLDLPMDCKSVKDRLIGDLPP FQPLKNPIAFVRNIYGMYELQEVFMSMTWHPDHFFCYAIDSKSSEKLRRSMMTLAGCF DNVYVLETGYDFDRAGHKQDKAHFDCLNVLLEKNWSHAITLQNFDMIIKTPEQLSDLS ELLNSTSVMGTDYGFPDRYDSSADWTPAGMKLFKDEKNVPEEILHRKLEIRKSLNQVI LSKVFVKSLFENLNMERVIERFDDQSVIEPSCSIILSFQTFRFVVDKFFVQPLTREIQ LVPSKTLEIIGRLR" gene <899055..>899297 /locus_tag="CAEBREN_15590" /db_xref="WormBase:WBGene00154315" mRNA <899055..>899297 /locus_tag="CAEBREN_15590" /product="hypothetical protein" /db_xref="WormBase:CBN15590" /db_xref="WormBase:WBGene00154315" CDS 899055..899297 /locus_tag="CAEBREN_15590" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54439.1" /db_xref="WormBase:CBN15590" /db_xref="WormBase:WBGene00154315" /translation="MKNEGLWILLHGTVYLKKYFSVNKVKEDFDFGAILCTREMIKIK NTGKIPDAKWLSEKFPQFREMQMKANGTYDKKSFKC" gene complement(<899397..>900000) /locus_tag="CAEBREN_00512" /db_xref="WormBase:WBGene00139237" mRNA complement(join(<899397..899640,899819..>900000)) /locus_tag="CAEBREN_00512" /product="hypothetical protein" /db_xref="WormBase:CBN00512" /db_xref="WormBase:WBGene00139237" CDS complement(join(899397..899640,899819..900000)) /locus_tag="CAEBREN_00512" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54384.1" /db_xref="WormBase:CBN00512" /db_xref="WormBase:WBGene00139237" /translation="MSTNPLLIVVKRLITQLIILSVATVIFVFYLIFGTTENEEENEK NKEDTVALSNVNNAPESHQLVQYQPYKVNLVGFPKLIQFSIDLRDVLKLKSVQIDSNF EPYNQPEDSERKEEKKKGYSMIISLQENLLIQRMNTVGE" gene complement(899663..899734) /locus_tag="CAEBREN_26959" /pseudo /db_xref="WormBase:WBGene00187570" tRNA complement(899663..899734) /locus_tag="CAEBREN_26959" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN26959" /db_xref="WormBase:WBGene00187570" gene <900832..>901148 /locus_tag="CAEBREN_01955" /db_xref="WormBase:WBGene00140680" mRNA join(<900832..900873,900918..>901148) /locus_tag="CAEBREN_01955" /product="hypothetical protein" /db_xref="WormBase:CBN01955" /db_xref="WormBase:WBGene00140680" CDS join(900832..900873,900918..901148) /locus_tag="CAEBREN_01955" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54165.1" /db_xref="WormBase:CBN01955" /db_xref="WormBase:WBGene00140680" /translation="MKFLLAILLIFFFKPSLSFDACRLCTFITVPTTWEDAALLAKAA CSRLGVAKGECHQIVDNADLTSSYPNMYPHIVNLKDIVCGKYCKKY" gene <901558..>902269 /locus_tag="CAEBREN_18869" /db_xref="WormBase:WBGene00157594" mRNA join(<901558..901602,902030..>902269) /locus_tag="CAEBREN_18869" /product="hypothetical protein" /db_xref="WormBase:CBN18869" /db_xref="WormBase:WBGene00157594" CDS join(901558..901602,902030..902269) /locus_tag="CAEBREN_18869" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54403.1" /db_xref="WormBase:CBN18869" /db_xref="WormBase:WBGene00157594" /translation="MKFFIVMCLLVAVFMTGTDAQGYDACIICKPFIKFPETWDEAKN LLAEGCGNLGEAKSACNGLLNAADLTRSYPQMLPYALSIKEIGCKYYCQE" gene <903247..>906247 /locus_tag="CAEBREN_21925" /db_xref="WormBase:WBGene00160650" mRNA join(<903247..903333,904295..904447,905836..905983, 906030..>906247) /locus_tag="CAEBREN_21925" /product="hypothetical protein" /db_xref="WormBase:CBN21925" /db_xref="WormBase:WBGene00160650" CDS join(903247..903333,904295..904447,905836..905983, 906030..906247) /locus_tag="CAEBREN_21925" /note="contains similarity to Pfam domain PF10591; contains similarity to Interpro domains IPR011992 (EF-hand-like domain), IPR002048 (Calcium-binding EF-hand), IPR019577 (SPARC/Testican, calcium-binding domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54127.1" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR019577" /db_xref="PFAM:PF10591" /db_xref="WormBase:CBN21925" /db_xref="WormBase:WBGene00160650" /translation="MGNNASSLSELNLFSKGGVFTREQLDEYQDCTFFTRKDIIRLYK RFYALNPHKVPTNMQGNRPAITTLTFEEVEKMPELKENPFKRRICEVFSEDGRGNLSF DDFLDMFSVFSEMAPLQLKLKYAFRIYDYDGDELLGHDDLSKMIRSLTRDELSDVEVE FIIERIIEEADLDGDSSINFAEFEHVVSRSPDFIRTFHIRI" gene complement(<906566..>907276) /locus_tag="CAEBREN_05696" /db_xref="WormBase:WBGene00144421" mRNA complement(join(<906566..906739,906789..907064, 907211..>907276)) /locus_tag="CAEBREN_05696" /product="hypothetical protein" /db_xref="WormBase:CBN05696" /db_xref="WormBase:WBGene00144421" CDS complement(join(906566..906739,906789..907064, 907211..907276)) /locus_tag="CAEBREN_05696" /note="contains similarity to Pfam domain PF03931; contains similarity to Interpro domains IPR001232 (SKP1 component), IPR011333 (BTB/POZ fold), IPR016073 (SKP1 component, POZ)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54361.1" /db_xref="InterPro:IPR001232" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR016073" /db_xref="PFAM:PF03931" /db_xref="WormBase:CBN05696" /db_xref="WormBase:WBGene00144421" /translation="MTETAAAERNIKISSSDNEVFMVPRNVIRLSTTINTLLQDLGLD EDDSTNPEPIPVQNVTAPILKKVIAWCQYHYQDAAPTDDSDNREKRTDDIASWDVEFL KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKSPEEIRRTFNIKNDFTPEEEE QIRKENAWCED" gene complement(<909182..>914465) /gene="Cbn-twk-29" /locus_tag="CAEBREN_00348" /db_xref="WormBase:WBGene00139073" mRNA complement(join(<909182..909270,909329..909545, 909598..909793,909839..909929,911263..911330, 911428..911767,913389..913461,913895..914143, 914352..>914465)) /gene="Cbn-twk-29" /locus_tag="CAEBREN_00348" /product="CBN-TWK-29 protein" /db_xref="WormBase:WBGene00139073" CDS complement(join(909182..909270,909329..909545, 909598..909793,909839..909929,911263..911330, 911428..911767,913389..913461,913895..914143, 914352..914465)) /gene="Cbn-twk-29" /locus_tag="CAEBREN_00348" /note="contains similarity to Pfam domain PF07885; contains similarity to Interpro domains IPR003280 (Potassium channel, two pore-domain), IPR013099 (Ion transport 2)" /codon_start=1 /product="CBN-TWK-29 protein" /protein_id="EGT54428.1" /db_xref="InterPro:IPR003280" /db_xref="InterPro:IPR013099" /db_xref="PFAM:PF07885" /db_xref="WormBase:CBN00348" /db_xref="WormBase:WBGene00139073" /translation="MRIDEEDDEDVKKAVEEDILKAFLEEDFNSQHYDSIWECLQHNR RAIAVNGFIIVFLIVYTTIGGFIFLNFEFEYQQYMKQNATLEKRLCIESLLNRDNRLR LTRASDVAAAIAERCLTEKVKDDRMQWSFKSAALYSLGILTTLGYGKIEPQTINGRIS TVIYGFFGIPLTVILLTNFGRYLEAMATRFRRLLTCRRRREDEEENVSGSTLFFIVIV YLILGAVMIPLMSGQFDFFNGIYYAFICLTAIEYGDIIPQNNWFLPISVFYMCTGLAI STIALDIGSIYVRKLHFIGKKIKNIANIRIWFGARNLEVRELITAVGQNIGIDQNVIA DIDIDTLVKTAIQVKLGRLSRVPQTHMIVEGIWPPELVPLFMKDGQFPLFVDSEDDLT DLRPKKYSVHFEDEPMISEIDDTSDSETGADKSQTTSSRLSPMPPRRSMQLRFEDSTD SSDPARRDNVMNASEITTTLTSDLSTDT" gene <920233..>922742 /locus_tag="CAEBREN_05862" /db_xref="WormBase:WBGene00144587" mRNA join(<920233..920407,920899..921151,921197..921304, 921641..921782,921829..921993,922125..922289, 922338..922502,922551..>922742) /locus_tag="CAEBREN_05862" /product="hypothetical protein" /db_xref="WormBase:CBN05862" /db_xref="WormBase:WBGene00144587" CDS join(920233..920407,920899..921151,921197..921304, 921641..921782,921829..921993,922125..922289, 922338..922502,922551..922742) /locus_tag="CAEBREN_05862" /note="contains similarity to Pfam domain PF00635; contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54434.1" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="PFAM:PF00635" /db_xref="WormBase:CBN05862" /db_xref="WormBase:WBGene00144587" /translation="MPKNPSLLQVIPNQKLVFTGPFTRITKADLQLRNISSSSVCFRV RTTAPEQYCVQPNSGFLRPGEWKRLTITLQPLEGTPPEAGRHKFMIQSCVPPPESFVD REEIWEEVDPADITMDKLTVTFLSRGNLGNEESSDSAWRPRKRRASCSPRLQRSRNGN NTFMMNEHQESSASVGRALEVPPSYTASQDAAFLSLRESLKSNTDENEELKKKVDRLE KLIDVMLKQNLKQQQAPSNEDGPSSSTSQDATVQKSLESLADENEELRKRLDKLEKPS CDELEKNLKHQQTQANEDGPSSSTSQDATMQKSLGSLADENEELRKRLDKLELVTRAD VEQNLKHQQTQTNEDGPSPDTSYTTSQAATMLKSLELYEELRKRVDNLEEAIGVELEE NCNNLNQKETESSDQTFFGCIYSFLAGPETFRKYFIVISISMLIGLIAAWLHLLVTER HVGK" gene 937082..937155 /locus_tag="CAEBREN_26473" /pseudo /db_xref="WormBase:WBGene00187084" tRNA 937082..937155 /locus_tag="CAEBREN_26473" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN26473" /db_xref="WormBase:WBGene00187084" gene <938589..>941262 /locus_tag="CAEBREN_29517" /db_xref="WormBase:WBGene00191482" mRNA join(<938589..938871,939713..940051,940943..>941262) /locus_tag="CAEBREN_29517" /product="hypothetical protein" /db_xref="WormBase:CBN29517" /db_xref="WormBase:WBGene00191482" CDS join(938589..938871,939713..940051,940943..941262) /locus_tag="CAEBREN_29517" /note="contains similarity to Pfam domain PF00076; contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54290.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="WormBase:CBN29517" /db_xref="WormBase:WBGene00191482" /translation="MDGPKPNLASAVSMESLNSVSSEATNPSQVRTLFVSGLPMDAKP RELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLTQQDAQDAKKLLQGVRFDPEC AQVLRLELAKSNTKVARPKQSPPPQPSALSAAGVPQFLAPMQPSDLLLDPQAAAILNE HQLLALSLPHLHAAQALQAAYMPASLQQFQQQSLYAAQLHPAAAAAAASLGVQHQQQQ QQSQASTSACSTLFVANLSAEVNEDQLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDL QKATQAMMSLQGFQVSANDRGGLRIEYARNKMADVNG" gene complement(<942749..>948585) /locus_tag="CAEBREN_24861" /db_xref="WormBase:WBGene00163586" mRNA complement(join(<942749..942886,944729..944903, 945273..945403,947190..947787,947833..948011, 948511..>948585)) /locus_tag="CAEBREN_24861" /product="hypothetical protein" /db_xref="WormBase:CBN24861" /db_xref="WormBase:WBGene00163586" CDS complement(join(942749..942886,944729..944903, 945273..945403,947190..947787,947833..948011, 948511..948585)) /locus_tag="CAEBREN_24861" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54292.1" /db_xref="WormBase:CBN24861" /db_xref="WormBase:WBGene00163586" /translation="MTAMREARGDSASADPLNGTRGKANITRPDYRSLPTSAATSQSS VPSTPVTIPLKTNGAEQIIFREFGAPIATPEDEEMLDDLEIKSEPVLSPRRTFTDFSE SHSDEKENREEDTDADTTLREEIEEDQDMMMTSDVIDNEEKENLMEEEEKKNEDSKTE EAPRKPEESGAKDPQEPDKSESDSKDPKDPKPTQNLFVPPHDFIRMVESAPELTNPFR KSPEDEKKEAEEIRKMTESYGEPRKAVLQRVNLEETDDDETETETETENEEMEDDEDD LDDDVRRQIAAVSDIPMVFGWNGGKKEKMEKPTSLPLHYEVEAECSTPRRAEFSINPE DEEPSSEDPTACPSSSAADEGVLQQSLLQLQKQLRKTDVRCSRLEKICEFQQRDIDSL RFEVDWKDKRIEYLQKTLQEMELSAQTTDASSIRSTSTS" gene complement(<951349..>952790) /locus_tag="CAEBREN_23157" /db_xref="WormBase:WBGene00161882" mRNA complement(join(<951349..951528,951816..952193, 952266..952592,952641..>952790)) /locus_tag="CAEBREN_23157" /product="hypothetical protein" /db_xref="WormBase:CBN23157" /db_xref="WormBase:WBGene00161882" CDS complement(join(951349..951528,951816..952193, 952266..952592,952641..952790)) /locus_tag="CAEBREN_23157" /note="contains similarity to Pfam domain PF00287; contains similarity to Interpro domain IPR000402 (ATPase, P-type cation exchange, beta subunit)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54150.1" /db_xref="InterPro:IPR000402" /db_xref="PFAM:PF00287" /db_xref="WormBase:CBN23157" /db_xref="WormBase:WBGene00161882" /translation="MKKADENATLMNGVETTGPARDDVPETFGQFLYNKKNGTVLGRN GKSWFQIIVFYIIFYALLAAFWLACLTIFLKTLDPKVPRFYGKGTIIGVNPGVGYQPW LKERPDSTLIQYNLQDQSTWKPYVDQMKTYLDKYDSNATETRECGAGDSNDDLEKNPD ALPCRFDLNVFEKGCSEKSEYGFKSGKPCVIISLNRLIGWRPTDFPANSVPEEVKDRY KTGSIAINCQGATNVDKEHIGKVTYMPPNGIDGRFYPYVFTKVRSWFLFLGQAAFWKE KNLFPFHFYGYQQPIAMVKFDTIPRNKLVIVECRAYALNIEHDISSRLGMVYFEVMVE DKKVEAKKEL" gene complement(<953605..>955344) /locus_tag="CAEBREN_07323" /db_xref="WormBase:WBGene00146048" mRNA complement(join(<953605..953739,953870..954037, 955237..>955344)) /locus_tag="CAEBREN_07323" /product="hypothetical protein" /db_xref="WormBase:CBN07323" /db_xref="WormBase:WBGene00146048" CDS complement(join(953605..953739,953870..954037, 955237..955344)) /locus_tag="CAEBREN_07323" /note="contains similarity to Pfam domain PF08265; contains similarity to Interpro domain IPR013272 (YL1 nuclear, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54232.1" /db_xref="InterPro:IPR013272" /db_xref="PFAM:PF08265" /db_xref="WormBase:CBN07323" /db_xref="WormBase:WBGene00146048" /translation="MQCPALTSLVHKSKCAEAPLFISSLICVSNPYDFIRTFKCERPR DRNVCAVTGRPARYRDPVTGLPYSSAYAFKVIRDRYHKHLRTMRGNEEVSSYLNSLKA LPTPPLSPRVSNVPGSVATPSRAPSNLATSSMRA" gene complement(<959422..>960814) /locus_tag="CAEBREN_02126" /db_xref="WormBase:WBGene00140851" mRNA complement(join(<959422..959490,959733..959862, 959907..960079,960126..960275,960324..960591, 960714..>960814)) /locus_tag="CAEBREN_02126" /product="hypothetical protein" /db_xref="WormBase:CBN02126" /db_xref="WormBase:WBGene00140851" CDS complement(join(959422..959490,959733..959862, 959907..960079,960126..960275,960324..960591, 960714..960814)) /locus_tag="CAEBREN_02126" /note="contains similarity to Pfam domain PF05764; contains similarity to Interpro domain IPR008895 (YL1 nuclear)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54144.1" /db_xref="InterPro:IPR008895" /db_xref="PFAM:PF05764" /db_xref="WormBase:CBN02126" /db_xref="WormBase:WBGene00140851" /translation="MSPRRRTSRATKTKNANGEGSPNEEQSNGSGDRSDESSEGTNED NVEVSQDPEVEGEEEDDESSDVSDEEGDDDSSDEDAEPVVLNVTERAKRATAGNKMAA LLASADQEDEFYKTAYGGFEENNEVDKEFKSPVHSDDDEVDSDFDKEEEEDEPVSGGE DDGKPRKKRRKFNEPKRGMTADDILAKNKKWAMARLAGNIVAPNTVDDKTQEAMLKEA EKTEKMNVESLKKYEAFELERKKKRERNPIRVFPPGPREQIKMTAGGTTVKVSDIKGI SLDNRRPPLCWQKGPVCVCP" gene <961366..>962114 /locus_tag="CAEBREN_10290" /db_xref="WormBase:WBGene00149015" mRNA join(<961366..961778,961856..>962114) /locus_tag="CAEBREN_10290" /product="hypothetical protein" /db_xref="WormBase:CBN10290" /db_xref="WormBase:WBGene00149015" CDS join(961366..961778,961856..962114) /locus_tag="CAEBREN_10290" /note="contains similarity to Pfam domain PF00076; contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54301.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="WormBase:CBN10290" /db_xref="WormBase:WBGene00149015" /translation="MSDTNLNEDDVLNIDDITEDDAVRTMILFSSNFAIIDFLQDLSA IEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSTQSLLTPEEKAEADAKSVYVGN VDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKDGMQNALAMTDSL LRGRQIKVDQKRTNRPGLSTTNRPPFRGRGGRGRGNVIVKYVYAGGFRPRGRGARRRP GFAPY" gene <962553..>963301 /locus_tag="CAEBREN_08544" /db_xref="WormBase:WBGene00147269" mRNA join(<962553..962686,962733..962823,962873..>963301) /locus_tag="CAEBREN_08544" /product="hypothetical protein" /db_xref="WormBase:CBN08544" /db_xref="WormBase:WBGene00147269" CDS join(962553..962686,962733..962823,962873..963301) /locus_tag="CAEBREN_08544" /note="contains similarity to Pfam domain PF08241; contains similarity to Interpro domain IPR013216 (Methyltransferase type 11)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54393.1" /db_xref="InterPro:IPR013216" /db_xref="PFAM:PF08241" /db_xref="WormBase:CBN08544" /db_xref="WormBase:WBGene00147269" /translation="MESNTQYARMDYWDKRFETEKNFEWLSGLEAFQHIVTPLIPKSS SIAHIGCGSSQVSMQLWNLGYKNITNVDYSKVLIENGRLEHPYMEWIADDITTLANCE SSSFDVVLEKATIEAILVTEKSAWEPSDSALQNLENIFSSICRVLKPNGIFISVSFTQ PHFRVPALLREKNWSVEMFEFGESFHYYVYVCRKGAVTDKELADRYSSIAKSWLRPL" gene <964125..>965647 /locus_tag="CAEBREN_22160" /db_xref="WormBase:WBGene00160885" mRNA join(<964125..964348,964395..964642,964691..964968, 965198..965360,965403..>965647) /locus_tag="CAEBREN_22160" /product="hypothetical protein" /db_xref="WormBase:CBN22160" /db_xref="WormBase:WBGene00160885" CDS join(964125..964348,964395..964642,964691..964968, 965198..965360,965403..965647) /locus_tag="CAEBREN_22160" /note="contains similarity to Pfam domain PF00097; contains similarity to Interpro domains IPR018957 (Zinc finger, C3HC4 RING-type), IPR011016 (Zinc finger, RING-CH-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54366.1" /db_xref="InterPro:IPR011016" /db_xref="InterPro:IPR018957" /db_xref="PFAM:PF00097" /db_xref="WormBase:CBN22160" /db_xref="WormBase:WBGene00160885" /translation="MEDFNTSLGPAVCRICMCGETSIPYLGKQAGEPLISPCRCSGTM GLFHRSCLEHWLTLTRTTNCEICKFSFKIKQKSRNFIDYIRQKGYKKVRTEPDNRNPF VDISFILVISPLACIALFLCVRGAALAGQKYHFAFENRDNDENGRNLEIRNETSMEFA LFVFVAVVLFFSYMIFLVVTLGNHVVQYKKWQAKNKIMFVVDQLDAEQSLHYNPSWKK QNKSWKTRISQAWSKLRGKPIRVLYPEIARNSIQIGRTSTPQMYAEYAEKPDNLALSP IGLDDLFANSVSPRKMSASAPSGRNDMRKSQSVYSVCSSFGTGVTSCSTPVPRKLSPS ANSVSTFKSTCSDELEVCDDESEDTLIEESQRGRFHVEKIKTPPVPKNHKY" gene complement(<966016..>967641) /locus_tag="CAEBREN_21445" /db_xref="WormBase:WBGene00160170" mRNA complement(join(<966016..966336,966390..967367, 967441..>967641)) /locus_tag="CAEBREN_21445" /product="hypothetical protein" /db_xref="WormBase:CBN21445" /db_xref="WormBase:WBGene00160170" CDS complement(join(966016..966336,966390..967367, 967441..967641)) /locus_tag="CAEBREN_21445" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54328.1" /db_xref="WormBase:CBN21445" /db_xref="WormBase:WBGene00160170" /translation="MDPLPPPMPSFSDVLDMVETIPNAEDVERVTVWAKDKYSSESKL EAKVERLEKNLVNSEFKVRNLEENVSSLRLQLNHAQWFERCVMDQDKQLEKAKTDEGI LKAEIVNKDEKILELFDKCHEREKTIEEQTQTMIEMMETINSLRKQTAYYEEEITKLL DEKEKMLNEVEEDSDASDDDDDDDDEDSGSDSDDSGSSDSDSNDEPENEVDFWKTQLE GAEALLLLSNKELIESKEQHDKAYKDLELKAENAEKKASEAEAECETLRSRLEDMTYE SRVAMEKEKTEKNQILLKLSEETKKAQETAQENKQILLKLSEETKRAQEMEQLQKTEI GLLKKNVSGIQAANRIEMDMIKAGHSGVVTKLTDQIRELHSKCQHIVNSNAANVMRLQ EEFVRDLKSKSVELETIQKSEKEQREKRLVSQDKLVAQMEINMQLQKDVIELTRQIQA LQAIDDAESAIGVEEQVAVGEDVEIGEEQAFDIDYSSDSSFEPVDEHDL" gene complement(<969718..>970239) /locus_tag="CAEBREN_02724" /db_xref="WormBase:WBGene00141449" mRNA complement(<969718..>970239) /locus_tag="CAEBREN_02724" /product="hypothetical protein" /db_xref="WormBase:CBN02724" /db_xref="WormBase:WBGene00141449" CDS complement(969718..970239) /locus_tag="CAEBREN_02724" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54122.1" /db_xref="WormBase:CBN02724" /db_xref="WormBase:WBGene00141449" /translation="MENRTVSSTSSSFEFSFEEALRQRRASEEIANICGNLQVQIKKL ENQLEVSYEDKKKFLCLIDELEVQMEKLHLKYQRDIENEKEKAADFNAEVMVCHRHIE ELEEKLKVKNRQIELHYEYMAARALEKQEMKKRVEELEDQLQLMQVQTMELDTLREEN EILKKVCLSNLSL" gene complement(<971408..>972376) /locus_tag="CAEBREN_14309" /db_xref="WormBase:WBGene00153034" mRNA complement(join(<971408..971530,971588..>972376)) /locus_tag="CAEBREN_14309" /product="hypothetical protein" /db_xref="WormBase:CBN14309" /db_xref="WormBase:WBGene00153034" CDS complement(join(971408..971530,971588..972376)) /locus_tag="CAEBREN_14309" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54155.1" /db_xref="WormBase:CBN14309" /db_xref="WormBase:WBGene00153034" /translation="MSSSSSDSFAVPATPNCLCCESLMERVKEKMTHIEQMRKEVLCN EENCQSLLKKCRYLEQERDFLEKDRGFLSRQNQRLRLENEKLAKMLKEKQLECVENER LLDVIHKDRDECINEKMKVSKFYRMEMKKLSDDNCDLRKESNYLKKKFEEELVKGVVE EDTPKNILSKLVDTITEDRIQNVFVHEEFEKSRQQMDSLLENMSRIELAMSRYFPKFG EEEKTPENSEVHVPATYGREEEKELGCSCNEQHRTLEQLLACPDLDLRIREELDQAKE CNSVQEEESEESEQDTSFEMVEENKDN" assembly_gap 974747..974756 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<975053..>975688) /locus_tag="CAEBREN_18575" /db_xref="WormBase:WBGene00157300" mRNA complement(<975053..>975688) /locus_tag="CAEBREN_18575" /product="hypothetical protein" /db_xref="WormBase:CBN18575" /db_xref="WormBase:WBGene00157300" CDS complement(975053..975688) /locus_tag="CAEBREN_18575" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54313.1" /db_xref="WormBase:CBN18575" /db_xref="WormBase:WBGene00157300" /translation="MQRYNPPSTSAQSVCIGCIRQIRKVNQVLQEQYKERINHDCECQ NYMMRIRELERALEMERAQKRTLKVMFSTRNPEEPDEKLKEVLEINKKLIAELQKVKE VSVTLPFEQWKDGIETSWSEKYEDLKEFACDRQEQYEYYKKKYENQREITARYKQAVI ERNQEIDDLRTELELHRDMESEEEEEEMVEMKDDGEVELPSCSSSGNSTSV" gene <977181..>978697 /locus_tag="CAEBREN_12068" /db_xref="WormBase:WBGene00150793" mRNA join(<977181..978109,978159..978528,978572..>978697) /locus_tag="CAEBREN_12068" /product="hypothetical protein" /db_xref="WormBase:CBN12068" /db_xref="WormBase:WBGene00150793" CDS join(977181..978109,978159..978528,978572..978697) /locus_tag="CAEBREN_12068" /note="contains similarity to Pfam domain PF00692; contains similarity to Interpro domains IPR008181 (DeoxyUTP pyrophosphatase domain, subfamily 1,), IPR008180 (DeoxyUTP pyrophosphatase domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54310.1" /db_xref="InterPro:IPR008180" /db_xref="InterPro:IPR008181" /db_xref="PFAM:PF00692" /db_xref="WormBase:CBN12068" /db_xref="WormBase:WBGene00150793" /translation="MAKTETTATSTRLTVRFTELNENARMPTYGSASAAGADLHSAED VVVPAKGKLCVSTGIQIELPVGYYGRVAPRSGLAAKHFIDVGAGVIDSDYRGEVKVLL FNFNDTDFEVKKGDRIAQLICEQIGMGTFEEVESLESTERGAGGFGSTGQSTMTSETE VKAADDDEKRIPVRFTLLNKDAEALRYASRQAAGADFYSTEEVVIPAHGKFCVSTGVQ VELPFGYYGRVAPRSGLAAKQFIDVGAGVIDSDYRGEVKVLLFNFNDTDFEVKKGDRV AQMICEKIGHCVYVPASELENTDRGAGGFGSTGENIMEKEEPLVKKSKIEQAEARPKS VTIQFTKKNENAEKPTYGSDLAAGADLYSCETATVPAKGKWLVSTGIHMKLPYGYYGR VAPRSGLAAKHFIDVGAGVIDSDYRGEVKVLLFNFGDADFEVKKGDRIAQLILEQIAH CRYEQVDSLEDTERGAGGFGSTGK" gene complement(<978805..>979696) /locus_tag="CAEBREN_00053" /db_xref="WormBase:WBGene00138778" mRNA complement(join(<978805..978961,979016..979119, 979165..979349,979397..979515,979560..>979696)) /locus_tag="CAEBREN_00053" /product="hypothetical protein" /db_xref="WormBase:CBN00053" /db_xref="WormBase:WBGene00138778" CDS complement(join(978805..978961,979016..979119, 979165..979349,979397..979515,979560..979696)) /locus_tag="CAEBREN_00053" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54187.1" /db_xref="WormBase:CBN00053" /db_xref="WormBase:WBGene00138778" /translation="MDDATFDFDSLPLITQTRLTNFTGEFGGRVCLNTSKITPQQQKG PTCGMVAVSMCLEHFGVKVKAEEILEKAKTMGYSKQGEMYSAGYLAAITNEFLPNSSK VREMPNAKEFFQAICDGKHILVAYDCGPNYQPVYVKGHSAHWLLACGFIEKQEEIGFV KTRKSIADPSEIAILGYQGKSTALNVFPFNDVVASNAQLFEAGAKRDPNEYIIPDPFD LSDIRDCVVEISMNN" gene complement(<979921..>980959) /locus_tag="CAEBREN_12318" /db_xref="WormBase:WBGene00151043" mRNA complement(join(<979921..980290,980337..980898, 980950..>980959)) /locus_tag="CAEBREN_12318" /product="hypothetical protein" /db_xref="WormBase:CBN12318" /db_xref="WormBase:WBGene00151043" CDS complement(join(979921..980290,980337..980898, 980950..980959)) /locus_tag="CAEBREN_12318" /note="contains similarity to Pfam domain PF00153; contains similarity to Interpro domains IPR002067 (Mitochondrial carrier protein), IPR018108 (Mitochondrial substrate/solute carrier), IPR001993 (Mitochondrial substrate carrier), IPR002113 (Adenine nucleotide translocator 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54152.1" /db_xref="InterPro:IPR001993" /db_xref="InterPro:IPR002067" /db_xref="InterPro:IPR002113" /db_xref="InterPro:IPR018108" /db_xref="PFAM:PF00153" /db_xref="WormBase:CBN12318" /db_xref="WormBase:WBGene00151043" /translation="MSGEGDSKPTDKKKGEKKGFDTRKFLIDLASGGTAAAVSKTAVA PIERVKLLLQVQDASQTITADKRYKGIVDVLVRVPKEQGYAALWRGNLANVIRYFPTQ ALNFAFKDTYKNMFQKGLDKKKDFWKFFAGNLASGGAAGATSLCFVYPLDFARTRLAA DVGKGNEREFKGLADCLVKIAKSDGPIGLYRGFFVSVQGIIIYRAAYFGMFDTAKMVF TSDGKKLNFFAAWAIAQVVTVGSGILSYPWDTVRRRMMMQSGRKDVLYKNTLDCAVKI IKNEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFI" gene complement(<982974..>985542) /gene="Cbn-rig-5" /locus_tag="CAEBREN_20859" /db_xref="WormBase:WBGene00159584" mRNA complement(join(<982974..983209,983650..983785, 984607..984758,985467..>985542)) /gene="Cbn-rig-5" /locus_tag="CAEBREN_20859" /product="CBN-RIG-5 protein" /db_xref="WormBase:WBGene00159584" CDS complement(join(982974..983209,983650..983785, 984607..984758,985467..985542)) /gene="Cbn-rig-5" /locus_tag="CAEBREN_20859" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR013098 (Immunoglobulin I-set), IPR013783 (Immunoglobulin-like fold), IPR013106 (Immunoglobulin V-set), IPR003599 (Immunoglobulin subtype), IPR013151 (Immunoglobulin)" /codon_start=1 /product="CBN-RIG-5 protein" /protein_id="EGT54173.1" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013106" /db_xref="InterPro:IPR013151" /db_xref="InterPro:IPR013783" /db_xref="WormBase:CBN20859" /db_xref="WormBase:WBGene00159584" /translation="MSEYVCVASNGIPPDESWTVKLLVTFSPLVQAQSEVVQASVGSM ARMVCTTEAWPRPEMGWEKDGEPIYESNNVAMTHTVSGQYHSVHILEIRNVQQSHFGV YRCVAKNDNGIHHSQVTLQRSQEDVPSSPPELEFYSQARRHESRNAPTTHSGMKKRHL FLCGFFSIIGNQKSRNQLEFINPFTRISESNRGKVGQLH" assembly_gap 988699..996080 /estimated_length=7382 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<996081..996145) /locus_tag="CAEBREN_27447" /pseudo /db_xref="WormBase:WBGene00188058" tRNA complement(<996081..996145) /locus_tag="CAEBREN_27447" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN27447" /db_xref="WormBase:WBGene00188058" gene complement(<999440..>1000707) /locus_tag="CAEBREN_05943" /db_xref="WormBase:WBGene00144668" mRNA complement(join(<999440..999529,999578..999703, 999747..1000228,1000423..1000585,1000633..>1000707)) /locus_tag="CAEBREN_05943" /product="hypothetical protein" /db_xref="WormBase:CBN05943" /db_xref="WormBase:WBGene00144668" CDS complement(join(999440..999529,999578..999703, 999747..1000228,1000423..1000585,1000633..1000707)) /locus_tag="CAEBREN_05943" /note="contains similarity to Pfam domain PF03057; contains similarity to Interpro domain IPR004296 (Protein of unknown function DUF236)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54392.1" /db_xref="InterPro:IPR004296" /db_xref="PFAM:PF03057" /db_xref="WormBase:CBN05943" /db_xref="WormBase:WBGene00144668" /translation="MLLILSTFFNVFFIVTLPILALCSKKKKAPAQKLDRSEHSTRDT KTTNTDDSTDGKSPAAPTPVAPAPVPVAPAKPAMAATHDPNYQTLAGLDNNVFGTKNG PADPAPIAPPAKPQMAATHDPNYQTLAGLNNDVFAKNPQVGGAGPAAPPDQNAKAATH DPNYQTLAGLNNNVFDKKDGGPAPGLAPTAGRPMAPADRNARAGTQDPNYQTLAAVGG DVFGADKKVGGGGGRPVQPANKNQKAATLDPNYQTLAAVGGDVFGADKKVGGGENRKP IQPVNKNQKAATMDPNYQTLAAVAGDVFGADKKKK" gene complement(<1001030..>1004148) /locus_tag="CAEBREN_16446" /db_xref="WormBase:WBGene00155171" mRNA complement(join(<1001030..1001102,1001152..1001254, 1001307..1001595,1001649..1002071,1002118..1002723, 1002938..1003782,1004067..>1004148)) /locus_tag="CAEBREN_16446" /product="hypothetical protein" /db_xref="WormBase:CBN16446" /db_xref="WormBase:WBGene00155171" CDS complement(join(1001030..1001102,1001152..1001254, 1001307..1001595,1001649..1002071,1002118..1002723, 1002938..1003782,1004067..1004148)) /locus_tag="CAEBREN_16446" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54107.1" /db_xref="WormBase:CBN16446" /db_xref="WormBase:WBGene00155171" /translation="MLILQLLLLLPFVTTDTVDSEARVKRNENSFTIDETISNHLKLG NILDALFINSKLFKKEISGEKLLTSVHGMPDVKPLRKLLQFNENNFMASIEKIESELA KISLNIEPFDLAAIENILPKISFLNSTVLNWIRESTLEKNTPDSISLDFVESQITLNP LYYFYQFKYNGRFGDSIEKCILMIGGVMNFREKVNEELKNENRQRKLWDDLKIKVKYG KWLHENQLHFEDLSKAPQKTPGLLDYLKNEFPFEDVLQDGLYIQNWHRALHNPRGENN IGASFIDQHIHKIYGLLKDKWVEKILINDQKLENLQTSVLQMLSYTKQFTSVNYYMNV VIKNPQTQYHLDVLMDFLIDMKRLHWYAVNLENLKRCLTFKEKLDVSSFDIFLNDDKW KVNQYYEVLGNLSAVLDEYDTDGTILHSLEKIRKYSGSEIKEIIKHWNDTKSVDFQNI ESIMTNSSCIKLFSKLYLPKTFGVLGFLQEITKSMNEIKQWISLDKDSCDAWVPVDFG NFSTYNLFPQTIKRLSDAHPHSNFKEFFAKIKALREELQLLESVKVSKPGLLVQNQHR QFQVQDDLMEVGNIFRTLHNIREIHQKMEDLKTILEVGDLAVKKIEEVKHPRHIVILE SAWKDWGNMKEDLERIQKSVEEVVRIFDTSPETSLKDIGKKYIAISNIRFTKDIYHKP YFNFGEKHDSLRLLDLSDSNIQKLSYSLESLRKPMNIDWAWVGDRFGNLALFLENVEK AMKEFHKLKAPLRRHSKWLAWKEQKIKNEKLKAQSWTYYLFQKSREFGVGAVLLGAQI GLLIYFMR" gene <1004901..>1006471 /locus_tag="CAEBREN_24836" /db_xref="WormBase:WBGene00163561" mRNA join(<1004901..1005267,1006039..1006226,1006274..>1006471) /locus_tag="CAEBREN_24836" /product="hypothetical protein" /db_xref="WormBase:CBN24836" /db_xref="WormBase:WBGene00163561" CDS join(1004901..1005267,1006039..1006226,1006274..1006471) /locus_tag="CAEBREN_24836" /note="contains similarity to Pfam domain PF01549; contains similarity to Interpro domain IPR003582 (Metridin-like ShK toxin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54362.1" /db_xref="InterPro:IPR003582" /db_xref="PFAM:PF01549" /db_xref="WormBase:CBN24836" /db_xref="WormBase:WBGene00163561" /translation="MFSVILSILLATWISPEFHVEGAVGSDLNCTTYNGTAFVYSNTA TICANVISDAACAVLYPAVSPGTVAPGNDNGRPLTCYTTATATPAAIVQDMKTAAIAD CPATCGYCCETSAYDCANVAYPRLDCSTITSAQCLSATWRTIIAEDCPSACGLCGSNG CVDAVVDCANDVSICTTVGMQDFVNTYCQYTCGRCASSTTTSSGSSSTCTSYAADSST ACADWAANGFCTNTFYTTAQRMAYCATTCKLC" gene <1006963..>1008085 /locus_tag="CAEBREN_25626" /db_xref="WormBase:WBGene00164351" mRNA join(<1006963..1007055,1007219..1007947,1007996..>1008085) /locus_tag="CAEBREN_25626" /product="hypothetical protein" /db_xref="WormBase:CBN25626" /db_xref="WormBase:WBGene00164351" CDS join(1006963..1007055,1007219..1007947,1007996..1008085) /locus_tag="CAEBREN_25626" /note="contains similarity to Pfam domain PF03057; contains similarity to Interpro domain IPR004296 (Protein of unknown function DUF236)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54364.1" /db_xref="InterPro:IPR004296" /db_xref="PFAM:PF03057" /db_xref="WormBase:CBN25626" /db_xref="WormBase:WBGene00164351" /translation="MDVQDIIGIALNLATAGSVAAALFVLPGCGGKKAKPKSDGGASP SDKGEGSQKGDDKEKSGAPSGAGDPSAAGDPSAAPPPPPAPAGGPPPPGGAGAPKPGG PGMAATHDPNYQTLAGIGNDCFEKKGGPAPGGAPAAPGAKPGMAATHDPNYQTLAGLD NNVFAKKDGGGAAPGGGPAAPADQNAKAATHDPNYQTLAGLNNNVFDKKDGGGGAAPG GDKKPIQPADKNKKAATLDPNYQTLAAVGGDVFGADKKAGGGSGGGDKKPIQPANKNQ KAATMDPNYQTLAAVGGDVFGADKKKK" gene complement(<1009220..>1012673) /locus_tag="CAEBREN_02415" /db_xref="WormBase:WBGene00141140" mRNA complement(join(<1009220..1009346,1009392..1009468, 1009633..1009718,1009764..1010133,1011178..1012469, 1012520..>1012673)) /locus_tag="CAEBREN_02415" /product="hypothetical protein" /db_xref="WormBase:CBN02415" /db_xref="WormBase:WBGene00141140" CDS complement(join(1009220..1009346,1009392..1009468, 1009633..1009718,1009764..1010133,1011178..1012469, 1012520..1012673)) /locus_tag="CAEBREN_02415" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003887 (Lamino-associated polypeptide 2/emerin), IPR020683 (Ankyrin repeat-containing domain), IPR002110 (Ankyrin repeat)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54417.1" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR003887" /db_xref="InterPro:IPR020683" /db_xref="WormBase:CBN02415" /db_xref="WormBase:WBGene00141140" /translation="MPPNGSIATTPRSRMATTTPTSGKQRPKKETLHYLAASSSTTSV DAARALLERGANVNAIDRDGATPLHYACVHDNVAMAQLFLTFGADPMSADKLGRTAYS IAKGNTLRFLRRYKKTNGQQRLGFFRRFFACHSRNDTFFIVRPDQEVAPLRPTALAEA ASISFNRGNPITKSYRNAKKKIRATFHAMRRSRANSTSTLQDVVLTSEGYRTVTTPSR TTIQKPVVSVKRSMSVSDLPRIPDKRDIREEDRRTKRSPVKKTRTPARSKTPDAAILN SRTPVGRPKRSRSQETKLVAMPKQNPMGYYENPKARNAGLRPAPSAPPLSPELAVLVE KKTPKTPKTPKSRSKSPAANTTEYFTADDESIEILGNDMKKLTLGPKSDKKSMKTPTR PISSSSGSSAEEEKREEKEVLTPTTVDDGEMRKIKRLRDGELKCELKKYGISPAGPLD PRTRKLYEKKLLIERRKISSRGYSPDADVVACRNSPQLELVIRNGFLPSEFAARARKC DEAVRKEFTGNGFGYNAFCYLIMDPRILGSKVETLTLETFVRSLFYVGKGSKNRPLQH FIDARSERRNQSDKLKTCSKIRTIHELWTLGFGIPRHEIAHGVSDEEAFVREASIIEA VKLANLGNKKAGEFHGSTKSWDPTTKAEYGTYLLDRALATLKVEGIRYVSEENLPDTL YPYVNNRRGGGGRTPKTPK" gene complement(<1013251..>1013944) /locus_tag="CAEBREN_14969" /db_xref="WormBase:WBGene00153694" mRNA complement(join(<1013251..1013357,1013403..1013544, 1013595..1013672,1013720..>1013944)) /locus_tag="CAEBREN_14969" /product="hypothetical protein" /db_xref="WormBase:CBN14969" /db_xref="WormBase:WBGene00153694" CDS complement(join(1013251..1013357,1013403..1013544, 1013595..1013672,1013720..1013944)) /locus_tag="CAEBREN_14969" /note="contains similarity to Interpro domain IPR002355 (Multicopper oxidase, copper-binding site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54241.1" /db_xref="InterPro:IPR002355" /db_xref="WormBase:CBN14969" /db_xref="WormBase:WBGene00153694" /translation="MKKGTFLIVNEPTDETVDRMLQVPKDKCDVYPALVYIPKYNKKM EKGLFCLLTIFAQIALYGLMAYFFKVGYLAMIPFEVFFLTMYAKEYVTTLHVQIIYLT IQLIFGAVITLLAFLPEGNGTRSDFQFLIPTLAPGTMGLFGFFFGLFTIIRLLLVASY HTHLFYSNLRDKFMDGKVVLQPA" gene <1015402..>1015710 /locus_tag="CAEBREN_10462" /db_xref="WormBase:WBGene00149187" mRNA join(<1015402..1015415,1015464..>1015710) /locus_tag="CAEBREN_10462" /product="hypothetical protein" /db_xref="WormBase:CBN10462" /db_xref="WormBase:WBGene00149187" CDS join(1015402..1015415,1015464..1015710) /locus_tag="CAEBREN_10462" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54204.1" /db_xref="WormBase:CBN10462" /db_xref="WormBase:WBGene00149187" /translation="MIDERNSTFNIILCVALIFFIIVLLVLIIIVFIALRKGQPNIYI QPQTVHPKQAVQIEMNESGIYSQDSQRSSSPASSNCSVVIKL" assembly_gap 1016830..1017118 /estimated_length=289 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1018402..>1019441) /locus_tag="CAEBREN_10566" /db_xref="WormBase:WBGene00149291" mRNA complement(join(<1018402..1018771,1018818..1019379, 1019432..>1019441)) /locus_tag="CAEBREN_10566" /product="hypothetical protein" /db_xref="WormBase:CBN10566" /db_xref="WormBase:WBGene00149291" CDS complement(join(1018402..1018771,1018818..1019379, 1019432..1019441)) /locus_tag="CAEBREN_10566" /note="contains similarity to Pfam domain PF00153; contains similarity to Interpro domains IPR002067 (Mitochondrial carrier protein), IPR018108 (Mitochondrial substrate/solute carrier), IPR001993 (Mitochondrial substrate carrier), IPR002113 (Adenine nucleotide translocator 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54454.1" /db_xref="InterPro:IPR001993" /db_xref="InterPro:IPR002067" /db_xref="InterPro:IPR002113" /db_xref="InterPro:IPR018108" /db_xref="PFAM:PF00153" /db_xref="WormBase:CBN10566" /db_xref="WormBase:WBGene00149291" /translation="MSGEGDSKSIEKKKGEKKGFDTRKFLIDLASGGTAAAVSKTAVA PIERVKLLLQVQDASQTITADKRYKGIVDVLVRVPKEQGYAALWRGNLANVIRYFPTQ ALNFAFKDTYKNMFQKGLDKKKDFWKFFAGNLASGGAAGATSLCFVYPLDFARTRLAA DVGKGNEREFKGLADCLVKIAKSDGPIGLYRGFFVSVQGIIIYRAAYFGMFDTAKMVF TSDGKKLNFFAAWAIAQVVTVGSGILSYPWDTVRRRMMMQSGRKDVLYKNTLDCAVKI IKNEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFI" gene complement(<1019690..>1020252) /locus_tag="CAEBREN_13954" /db_xref="WormBase:WBGene00152679" mRNA complement(join(<1019690..1019734,1019792..1019857, 1020011..1020105,1020156..>1020252)) /locus_tag="CAEBREN_13954" /product="hypothetical protein" /db_xref="WormBase:CBN13954" /db_xref="WormBase:WBGene00152679" CDS complement(join(1019690..1019734,1019792..1019857, 1020011..1020105,1020156..1020252)) /locus_tag="CAEBREN_13954" /note="contains similarity to Pfam domain PF01826; contains similarity to Interpro domain IPR002919 (Protease inhibitor I8, cysteine-rich trypsin inhibitor-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54161.1" /db_xref="InterPro:IPR002919" /db_xref="PFAM:PF01826" /db_xref="WormBase:CBN13954" /db_xref="WormBase:WBGene00152679" /translation="MKSAIILISLLLVFAVFIEARDKDIDKEAYETEKTGYCPRYEKW HECGNGCEPSCTNPSPPSRKKCKLPCIKYSCRCKKNYFRDNQGTGRCVRIEKCKKW" gene complement(<1021890..>1024508) /locus_tag="CAEBREN_05967" /db_xref="WormBase:WBGene00144692" mRNA complement(join(<1021890..1022009,1022187..1022275, 1022403..1022622,1022817..1023074,1023125..1023240, 1024346..>1024508)) /locus_tag="CAEBREN_05967" /product="hypothetical protein" /db_xref="WormBase:CBN05967" /db_xref="WormBase:WBGene00144692" CDS complement(join(1021890..1022009,1022187..1022275, 1022403..1022622,1022817..1023074,1023125..1023240, 1024346..1024508)) /locus_tag="CAEBREN_05967" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54385.1" /db_xref="WormBase:CBN05967" /db_xref="WormBase:WBGene00144692" /translation="MEGTGGEGSEKGGGEKACCCVRERPERNGDDDSQLMLLKPTLLA AATAANQQQNYSDEYRKRSNTLQSNRSDKRWPKRDMGPQFELRCCIDPEILRINVDRQ YYFEDETVRVNGSVFHKRHDYNNLMSVIPRSKFNGIHIKMEDDCPQGGDDVRLCLLKS LGAHNLRSIPCVQCKDELKVYDKYPLIDGVFYISPVSQFGPKTEISLDGRRFFLQQLC ARCLWSDWSCKNCGKDEWFDGKSYVLGTLYYYDIVSSGRCCPTVCQNCKQPLGVRDQL STQLANGNYATINEQMTCQSCGVSKFHLVRDIKTCHVSRAPTFCE" gene 1032998..1033079 /locus_tag="CAEBREN_27711" /db_xref="WormBase:WBGene00188322" tRNA 1032998..1033079 /locus_tag="CAEBREN_27711" /product="tRNA-Ser" /db_xref="WormBase:CBN27711" /db_xref="WormBase:WBGene00188322" gene <1033454..>1034446 /locus_tag="CAEBREN_19128" /db_xref="WormBase:WBGene00157853" mRNA join(<1033454..1033579,1033629..1033781,1033823..1033895, 1033943..1034312,1034356..>1034446) /locus_tag="CAEBREN_19128" /product="hypothetical protein" /db_xref="WormBase:CBN19128" /db_xref="WormBase:WBGene00157853" CDS join(1033454..1033579,1033629..1033781,1033823..1033895, 1033943..1034312,1034356..1034446) /locus_tag="CAEBREN_19128" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54265.1" /db_xref="WormBase:CBN19128" /db_xref="WormBase:WBGene00157853" /translation="MRIWVASLIFYGSVFAICELLRFLVVTSFDNPKRLSALLILEFI GTLQICVPMFDVGTILENYGLLGVFIEITVIELANCYFQRDAVAHPCPLVTNCYRKSK AIRRGIYVFFVQLAAAYLSYFVARLFWSFGVHPVHLELLDQDSCTSDLTVAITTGCII EGAATFLAKWFEKFVDERYEGDTKLCSVANCVFSGLLCAVGINYTGMYANPIVAWACT FNCLGVSHAGHLFVYWLSPLIAWYFAEIVFGAEDVIEEEEAVEAAKDAKKTD" gene complement(<1035533..>1037310) /locus_tag="CAEBREN_22656" /db_xref="WormBase:WBGene00161381" mRNA complement(join(<1035533..1035670,1035717..1035818, 1035869..1036596,1036649..1036898,1036946..1037059, 1037107..1037176,1037231..>1037310)) /locus_tag="CAEBREN_22656" /product="hypothetical protein" /db_xref="WormBase:CBN22656" /db_xref="WormBase:WBGene00161381" CDS complement(join(1035533..1035670,1035717..1035818, 1035869..1036596,1036649..1036898,1036946..1037059, 1037107..1037176,1037231..1037310)) /locus_tag="CAEBREN_22656" /note="contains similarity to Pfam domain PF03388; contains similarity to Interpro domains IPR013320 (Concanavalin A-like lectin/glucanase, subgroup), IPR000910 (High mobility group, HMG1/HMG2), IPR005052 (Legume-like lectin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54446.1" /db_xref="InterPro:IPR000910" /db_xref="InterPro:IPR005052" /db_xref="InterPro:IPR013320" /db_xref="PFAM:PF03388" /db_xref="WormBase:CBN22656" /db_xref="WormBase:WBGene00161381" /translation="MTSTRVLLVLLAAITVIRAQNNPVFKKFEYKHSFRAPNLSQRDG SIPFWIVSGDAIASGEQLRLAPSMRSRKGIAWNKRAFVESENFQVDIALKIGGQGRVG ADGLGIWYTSQLGALGPVFGANDFWTGMGLFMDSFDNDGQKNNPQVSLMLNDGTRSYD HHTDGSQQILSSCQRDFRNKPYPVRVRIEYMKNVLTVHVDDGMQPTPRYELCMRAENI FLPRNGYFGVSAATGGLADDHDILDFSVFSLFNEQQKPVPVAEQIPQQEKQKYDEEFE RQMKEYEQERAKFKEQHPDKVKEDDEYDPNKYYEDATARELRLIYESQNAIHQVMQNM DQRLAQIQQAQLSGAGAAAAAVPQTGQAAPAAVAGGASFQQHEKNEVITSLRDLTQSV RDMKQYVNEIFTKTYNIDQKIAQGGAGGGGVDSSMHQKVDSLLNELRTVRATQVQTTG PGANCPNVACVSTTIFLVILTVQSGIILAFIFVRSKQDKAKFY" gene <1037640..>1037906 /locus_tag="CAEBREN_31488" /db_xref="WormBase:WBGene00193453" mRNA <1037640..>1037906 /locus_tag="CAEBREN_31488" /product="hypothetical protein" /db_xref="WormBase:CBN31488" /db_xref="WormBase:WBGene00193453" CDS 1037640..1037906 /locus_tag="CAEBREN_31488" /note="contains similarity to Interpro domains IPR013320 (Concanavalin A-like lectin/glucanase, subgroup), IPR005052 (Legume-like lectin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54263.1" /db_xref="InterPro:IPR005052" /db_xref="InterPro:IPR013320" /db_xref="WormBase:CBN31488" /db_xref="WormBase:WBGene00193453" /translation="MRAENIFLPRNGYFGVSAATGGLADDHDILDFSVFSLFNEQRKP VPVAEQIPQQEIQKYDEKFERRMKEYEQERAKFKEQHPDNPLST" gene complement(<1039600..>1040629) /locus_tag="CAEBREN_13985" /db_xref="WormBase:WBGene00152710" mRNA complement(join(<1039600..1039776,1039878..1040068, 1040116..1040363,1040502..>1040629)) /locus_tag="CAEBREN_13985" /product="hypothetical protein" /db_xref="WormBase:CBN13985" /db_xref="WormBase:WBGene00152710" CDS complement(join(1039600..1039776,1039878..1040068, 1040116..1040363,1040502..1040629)) /locus_tag="CAEBREN_13985" /note="contains similarity to Pfam domain PF00646; contains similarity to Interpro domain IPR001810 (F-box domain, cyclin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54340.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CBN13985" /db_xref="WormBase:WBGene00152710" /translation="MNFDLRFEKKESSSVFYRQFEKWNCLPEELKLECMKPMDLKTRF CLRRTSKTEHRLVNSQRFDLCSIDFDEESDGFIRGSITDKSYHNTSSRFRFRRSEDMA RAISFFSFLFQNANINCFGNNCDVNALDFLTCMNVTSPYRIKTFMGTISPKLIQFFEK CADNSFNQISFVYGDKKPFPVKDLIQCKCLDSVKKWRMGGRNAPDLGHEIVRKWIEID VDIGSSQGIQHYGTETVDDFVSELTDYEM" gene complement(<1041633..>1044735) /locus_tag="CAEBREN_10873" /db_xref="WormBase:WBGene00149598" mRNA complement(join(<1041633..1041729,1041898..1042061, 1042565..1042967,1044611..>1044735)) /locus_tag="CAEBREN_10873" /product="hypothetical protein" /db_xref="WormBase:CBN10873" /db_xref="WormBase:WBGene00149598" CDS complement(join(1041633..1041729,1041898..1042061, 1042565..1042967,1044611..1044735)) /locus_tag="CAEBREN_10873" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54183.1" /db_xref="WormBase:CBN10873" /db_xref="WormBase:WBGene00149598" /translation="MWNDDPKPKRIFTIEPSETFRLGDMPLVPVDNISSMMNSAARLA LLVCNQNWCSHFLKDHTLNHQESGTINLCMKQLSMPIDNDETVKTDDPILINDILSKG HFERLTVIKDAQNGNWDRMVVLQEKKYKVSHLIFSENATNPEIVSRMIQSFDPIHLDS VSFSYLANPVNIFRGQFTMPKLWKLGFFLDANVRDLHDYLKEVQPAPFKLSFESEDAI DTFAEVMSPDDLIHLDEHVLICILVAQEYCLQKKEDGTMEISSL" gene complement(<1045698..>1047892) /locus_tag="CAEBREN_09303" /db_xref="WormBase:WBGene00148028" mRNA complement(join(<1045698..1046121,1046169..1046324, 1046517..1047140,1047191..1047257,1047790..>1047892)) /locus_tag="CAEBREN_09303" /product="hypothetical protein" /db_xref="WormBase:CBN09303" /db_xref="WormBase:WBGene00148028" CDS complement(join(1045698..1046121,1046169..1046324, 1046517..1047140,1047191..1047257,1047790..1047892)) /locus_tag="CAEBREN_09303" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR007471 (Arginine-tRNA-protein transferase, N-terminal), IPR007472 (Arginine-tRNA-protein transferase, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54373.1" /db_xref="InterPro:IPR007471" /db_xref="InterPro:IPR007472" /db_xref="WormBase:CBN09303" /db_xref="WormBase:WBGene00148028" /translation="MSRTFLEFIGTNQKSNCGYCNGERGETTVKSGVKAGAWAHTMRV NDYAGLLDMGWRRSGRYLYKPNNRVTCCPQFTIRLDVTKFKMSRSQKRAMRQMNEFLA TGKRPVCGIKEEDSGAEKVVVPGTSSDKSSEKVKSEDVTAVRKEKDPDRPVLKKKEIR NKRFEEKCRQRNLDPDVVRAERRQKDANRQRTIQSFIDEARPDWKHKLEVKLVPLGTE EFDSKDNESFELYKKYQHIIHKDEGCRLAGFRRFLCDSPLIKEKRLGVDLGSFHLWFL LDGKLIAVSVVDLLPNCLSAKYMYYDPDYSFLSMGTYTALREIDQTQRLEKVNHNLKY YYMGYYIHSCPKMRYKAKFRPSDLLCDESFNWLELDACTEFIEKSTDRNGFAEFCPGF PRPAPLPLGDMLVYTDGAMTTFDRAFSRLTDADKKEQVLRNAQEIARLVGPNLDAAVY YFSEFEA" gene complement(<1048098..>1048830) /locus_tag="CAEBREN_19842" /db_xref="WormBase:WBGene00158567" mRNA complement(join(<1048098..1048377,1048423..1048677, 1048751..>1048830)) /locus_tag="CAEBREN_19842" /product="hypothetical protein" /db_xref="WormBase:CBN19842" /db_xref="WormBase:WBGene00158567" CDS complement(join(1048098..1048377,1048423..1048677, 1048751..1048830)) /locus_tag="CAEBREN_19842" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54423.1" /db_xref="WormBase:CBN19842" /db_xref="WormBase:WBGene00158567" /translation="MLKHWRVLARSFATASEEAAPKVDVSYLRPRHRIIAAGGMPPIQ FDSERERTSRRERFGKYGLASGVPVEELFPTAEEIEEEQALGLYREFNDVKKEYMELQ QKKKAAEEARLAELEKNLKKYPAALAKYEASLVKQEREKDDKELALEKRIREIQEYFG YWMDPKDPRFEVMLQQKEAEEKKAAKMAKRDEIQKKRYAENVQG" gene complement(<1049088..>1050564) /locus_tag="CAEBREN_05733" /db_xref="WormBase:WBGene00144458" mRNA complement(join(<1049088..1049147,1049194..1049380, 1049427..1049681,1049731..1049882,1049926..1050366, 1050421..>1050564)) /locus_tag="CAEBREN_05733" /product="hypothetical protein" /db_xref="WormBase:CBN05733" /db_xref="WormBase:WBGene00144458" CDS complement(join(1049088..1049147,1049194..1049380, 1049427..1049681,1049731..1049882,1049926..1050366, 1050421..1050564)) /locus_tag="CAEBREN_05733" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR019781 (WD40 repeat, subgroup), IPR022052 (Histone-binding protein RBBP4), IPR001680 (WD40 repeat), IPR020472 (G-protein beta WD-40 repeat, region), IPR015943 (WD40/YVTN repeat-like-containing domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54157.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR020472" /db_xref="InterPro:IPR022052" /db_xref="WormBase:CBN05733" /db_xref="WormBase:WBGene00144458" /translation="MSDAGSCEEISREQRVWKKNVPYLYDTVVTKELDWPTLTVQWMP DVTKTENSDTSVHRMIMGTHTSDDVQNHLMISKFSITIDTQEVDEAKWDAELEEFGGY GVGNAAKLDVEIRINHPGEVHRARYMPQNPIIIASRGPSDDVYIFDYTKHPSQPHDNK FRPQLKLKGHEGEGYGMSWNNIKEGHLITAGDDGMICHWDINANQRLSGQITPQTKFK GHASNIEDVAFHTLHENVFGSVGNDKKLNLWDLRQPKPQLSAAGHDSSVNCLSFNPFS EFIVATGSLDKTVALWDIRNMRNKMYTLRHHDDEVFQVEFSPHFDTVLASSGSDNRVI VWDLSKIQDPSSSSSPKSESPPAEVLFVHAGHSGKVADFSWNPNRPWTICSSDEFNKL QVWEVSGMIISPDNSELQNA" gene complement(<1050850..>1052196) /locus_tag="CAEBREN_17929" /db_xref="WormBase:WBGene00156654" mRNA complement(join(<1050850..1051363,1051412..1051995, 1052041..>1052196)) /locus_tag="CAEBREN_17929" /product="hypothetical protein" /db_xref="WormBase:CBN17929" /db_xref="WormBase:WBGene00156654" CDS complement(join(1050850..1051363,1051412..1051995, 1052041..1052196)) /locus_tag="CAEBREN_17929" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR019781 (WD40 repeat, subgroup), IPR022052 (Histone-binding protein RBBP4), IPR001680 (WD40 repeat), IPR020472 (G-protein beta WD-40 repeat, region), IPR015943 (WD40/YVTN repeat-like-containing domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54264.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR020472" /db_xref="InterPro:IPR022052" /db_xref="WormBase:CBN17929" /db_xref="WormBase:WBGene00156654" /translation="MATLEDGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLTV QWLPETEKGGSDHSVHRLILGTHTSDEQNHLLISKISMPTDDAQFDASRYDTERSEFG GFGAVNGKVEPDIKINHEGEVNRARYMPQKSSIIATKSPSADVYIFDYTKHPAVPRDN SFTPLIKLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINASQNVAGELKAREVF KGHDSVVEDVAWHVLHDGVFGSVGDDRKLLIWDIRSNTPGHSVDAHTAEVNCLAFNPY SEFILATGSADKTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRL HVWDLSKIGEDQTAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQ VWQMADNIYNEAEEEIAPDAVERPM" gene <1052683..>1054684 /gene="Cbn-nra-2" /locus_tag="CAEBREN_26204" /db_xref="WormBase:WBGene00164929" mRNA join(<1052683..1052760,1052807..1052958,1053003..1053129, 1053177..1053410,1053457..1053766,1053811..1053934, 1053986..1054568,1054619..>1054684) /gene="Cbn-nra-2" /locus_tag="CAEBREN_26204" /product="CBN-NRA-2 protein" /db_xref="WormBase:WBGene00164929" CDS join(1052683..1052760,1052807..1052958,1053003..1053129, 1053177..1053410,1053457..1053766,1053811..1053934, 1053986..1054568,1054619..1054684) /gene="Cbn-nra-2" /locus_tag="CAEBREN_26204" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR008710 (Nicastrin), IPR007484 (Peptidase M28), IPR018247 (EF-Hand 1, calcium-binding site), IPR001261 (ArgE/DapE/ACY1/CPG2/YscS, conserved site)" /codon_start=1 /product="CBN-NRA-2 protein" /protein_id="EGT54319.1" /db_xref="InterPro:IPR001261" /db_xref="InterPro:IPR007484" /db_xref="InterPro:IPR008710" /db_xref="InterPro:IPR018247" /db_xref="WormBase:CBN26204" /db_xref="WormBase:WBGene00164929" /translation="MQEEIIDFFRNPALLFYMTLMLTVCMVSGSQQVGDVVETEFHAY RLQQFEISGNMYGSRNHRVSYEAVSLGSRALRRTMVTTWREVLTHDVDDMWALSTGAV LVFIPDNIDDLNDIDKKAFLDFETKLLNVRTDLAVYVAPYNDDAASILNDVNTRAEKA PSAAQHLLQSLSGNTISITSSDNVQELPDNYKPLNVVGRLSSGDRASPTIAFVAHYDT SSVIPGVSPGADSNGSGVVALLELLAVLSKFYDSPSTRPPYNLLFMWTAGGKLNYQGS RHWIDEFQKGIEGADFLDSGLNRKDDRIDLAICIESIGRKTGGLYMHAGKAPGENSSA AQLLRRLNNIAPKKNIELVTKKISLTTASAWEHEKFNIKRMPAVTLSTLSSPTDPARN SILDLPSNIDEEELIDNIRLIAEAVLGYILGLPETGPSSDSRIKSEVSMLSKDAVDKQ RVHHFIRQFASKPRPIGDRRATESVTSNLASAAAGYGQVFKSAVTITDAKVFGVTQNR LVAERVKPAVFELVIASGVIAYLSAFYYVATHSQKSIEGTVSAIRKSIF" gene complement(<1055330..>1055990) /locus_tag="CAEBREN_04741" /db_xref="WormBase:WBGene00143466" mRNA complement(join(<1055330..1055389,1055566..1055735, 1055780..>1055990)) /locus_tag="CAEBREN_04741" /product="hypothetical protein" /db_xref="WormBase:CBN04741" /db_xref="WormBase:WBGene00143466" CDS complement(join(1055330..1055389,1055566..1055735, 1055780..1055990)) /locus_tag="CAEBREN_04741" /note="contains similarity to Pfam domain PF01090; contains similarity to Interpro domains IPR018277 (Ribosomal protein S19e, conserved site), IPR001266 (Ribosomal protein S19e)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54346.1" /db_xref="InterPro:IPR001266" /db_xref="InterPro:IPR018277" /db_xref="PFAM:PF01090" /db_xref="WormBase:CBN04741" /db_xref="WormBase:WBGene00143466" /translation="MTRATSIKDVDQHEATKSIAHFLKKSGKVKVPEWSDLVKLGVNK ELAPVDPDWFYTRAASLARHLYFRPAGIGAFKKVYGGNKRRGVAPNHFQTSAGNCLRK AVQQLEKIKWVEKHPDGKGRILSKQGRKDLDRIATSLRSSGQQA" assembly_gap 1057027..1057036 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1058723..>1059793 /locus_tag="CAEBREN_24621" /db_xref="WormBase:WBGene00163346" mRNA join(<1058723..1058862,1058912..1059048,1059371..1059562, 1059672..>1059793) /locus_tag="CAEBREN_24621" /product="hypothetical protein" /db_xref="WormBase:CBN24621" /db_xref="WormBase:WBGene00163346" CDS join(1058723..1058862,1058912..1059048,1059371..1059562, 1059672..1059793) /locus_tag="CAEBREN_24621" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54422.1" /db_xref="WormBase:CBN24621" /db_xref="WormBase:WBGene00163346" /translation="MSSQPTFRGGGGRGGGGRPRGRGARGGQFRGNSRERRSEHPLSP DRRSIHSEDQFRPPRFSNYREPRRPNSRSPSPQNRMQNRNSPHEFSDRSMNDHDRRRR SPGPMRNEDRNDRRIDGNPSRNEESIDVRAVIEDRHPTLKLTGKEKAREWKLRLADAE EEVRRAEYALRRAKMDHEAIKEAYQEYTETTIVRKN" gene <1062966..>1068871 /locus_tag="CAEBREN_18229" /db_xref="WormBase:WBGene00156954" mRNA join(<1062966..1063474,1063621..1063769,1063818..1063910, 1064124..1064195,1064545..1064712,1064755..1064838, 1064889..1064927,1064973..1065086,1065279..1066172, 1066222..1066604,1066739..1066951,1067009..1067242, 1067289..1067437,1067604..1067690,1067750..1067867, 1067917..1068280,1068376..1068667,1068751..>1068871) /locus_tag="CAEBREN_18229" /product="hypothetical protein" /db_xref="WormBase:CBN18229" /db_xref="WormBase:WBGene00156954" CDS join(1062966..1063474,1063621..1063769,1063818..1063910, 1064124..1064195,1064545..1064712,1064755..1064838, 1064889..1064927,1064973..1065086,1065279..1066172, 1066222..1066604,1066739..1066951,1067009..1067242, 1067289..1067437,1067604..1067690,1067750..1067867, 1067917..1068280,1068376..1068667,1068751..1068871) /locus_tag="CAEBREN_18229" /note="contains similarity to Pfam domain PF02171; contains similarity to Interpro domain IPR003165 (Stem cell self-renewal protein Piwi)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54416.1" /db_xref="InterPro:IPR003165" /db_xref="PFAM:PF02171" /db_xref="WormBase:CBN18229" /db_xref="WormBase:WBGene00156954" /translation="MPNPSVKPFIPKPLALQIIKPVPLEISRRIKTESFTTTTNSSFH LQSFPHHPIYLLLRLLLPSTSSSSSSAHFFVMSCPFCETFFLHSLLLCKAIISSSPSV SQRTKPRRPPCKREGRRGRRREHGRAEETEEEDVVEHFILKKLLRRRLLLLFWSTAKK KKNFLLPLGVIPCTLVVMSSIPDNEDFPALTSAISNAPAKVQGVWAQRKPDQMMKLSR QSSETKSNAWSNNVSTAETKLTMEVLGNSGDREGVVDKTFPPPNGSATNEPASQIEAP SPTSPISIDLKLSKLHLNDSPILQTTPKSLLSPEENMWSSLRNVDPNASKLSSAETEN SESNCIPPPEDNHVSNEYVPVTIPGCSAWGNTDTSLSALQTSEVVSSSSSSSSSSGNT PIVSSSEFPGLPSSSTTEVAPQSPTSALDQTDFPSLCPSAPVIAPVWNRAPPTASTPV VLPAPSEPTPEIDFDKSSSRKTMKRLSMGTKVTLMTNCYLMTVKKTKVYYYDVKMKKQ YTVNGQKRYDDLTASNKKDAKKKVDNKELNLRILQLLFRRLRLIDVPFAYDGCHNLHL LNPLENLIGRKQVVKQCLENEDLPEDMSQSLFNKTKDGRIYISLTLNEKVPFYQLDEI YNESLDEGVTPCRNVIQLILLQPAKNGDFFILPQNQIFEKSKFRTIEGEKFELSDLVK VGIKASVKVGEGENDEKGVPFICLDHCKSNFFLEGPLASAQQYLPVNFESQTSCRNLL KGLEVLSIYNNTKMKIVDFSSDSLEKKEFKETNSNENKSVWDDAARLAKKKKSEFNKN YKVAHLSFGSSKKSYYFPIENIRLAPYQKMSPHHRTPPTPSDPRERVQESQRIAEKAG ILKSNNLTKKFGITVNNEPIEVTGWKLDIPQVLYAGPNNKPHRVFMDSESASWNPSGK FVASASVKKIHILYTESPKNKNLQGAVEAFKKDLITESASLWTKITDKQITIEKLDVD FRGNNFEGILTAKLDKLTSDTYVIYIDEKRDNPSHGVVKLVERKKGRMIQHVAIDEAL KRMKSKSTPQFILMKMNVKLGGLNHRVLMNGNISHLWGEASNTLIISYDVCHSSGART YTKGEPTEEPSVVGFGFNGLRLPEQVIGDFALQDSRQEQVDCEILMKKTQWMVNLYRE NRKTFPANIVILRDGVSEGQYKMTQNQELNAILRGIHGAMRMRQMTLERPKFAYIIAT KRHANRLFVKNMGECFELLNSITNTSPMTAVDTGIVRKGGDEVIFVSHHPLGGTAQPI MLNTLHNEIFESHDQLISFIGALCCTHQRSASIISLPETIFTADAYAKRGAELFETYS HCVRTRKEKLPMREGGKPDWARITEDLCYQTSPFATKCMV" gene <1074062..>1077507 /locus_tag="CAEBREN_08275" /db_xref="WormBase:WBGene00147000" mRNA join(<1074062..1074179,1074271..1075056,1075106..1075986, 1076101..1076261,1076311..1076397,1076446..1076560, 1076614..1076986,1077040..1077334,1077387..>1077507) /locus_tag="CAEBREN_08275" /product="hypothetical protein" /db_xref="WormBase:CBN08275" /db_xref="WormBase:WBGene00147000" CDS join(1074062..1074179,1074271..1075056,1075106..1075986, 1076101..1076261,1076311..1076397,1076446..1076560, 1076614..1076986,1077040..1077334,1077387..1077507) /locus_tag="CAEBREN_08275" /note="contains similarity to Pfam domain PF02171; contains similarity to Interpro domain IPR003165 (Stem cell self-renewal protein Piwi)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54194.1" /db_xref="InterPro:IPR003165" /db_xref="PFAM:PF02171" /db_xref="WormBase:CBN08275" /db_xref="WormBase:WBGene00147000" /translation="MPSKNNKKLAAAERAAKLRAEAEETAATNPVVEEAVETPADNAP VAPPSSEMAALAVTTEKPSIIPSTSEQKKKKVSAPYKPPAPLTPLTSTGSKTVITNSY RMEIKKHTNRRYDVTVSKNVDGRVTEIVGARGADKQQQNSLFQLITGLLKDDRMDLKN ISYDGALSLYNSSNQELAGRTFFLNSGDLPQNLRSTLFPRNENGTLDILIERNAQQPT LDTQDVLQENLNGASCPVTQMLQQVMHQEAKRNGFVVVDNGTEMFERPRGEANNGVHE MNGIGAGLKIAKGGDGKGAVHIVMEFKTTRFFDNGPLSALGSRAKFNDTFHAQRYLSG LKVGTTYSNQVITIHGLSSDSISELTYDGNSILARSAEVAHRDVREYNGNWPAVQTRI RDRRTRQFRVFSFPIENLRVLPDQKLMPKHGSPPTCPGPEVRFAQTTTVGQSAKLLAP NPTLASFGGQILPTPLTVQAVEVPAPTILYKDSQARVIQAMVNRQSVSFEQKNFISIQ FFQANWRKPAGAKFFEPASPFKVLILYNSVYLTSQQRGSIGEKVEDVKTQLQSMAARG TGLLITVSGTEDLGGTFGDEVSAGEAIRMKLETLKDLPANEKPVVIYIDPSTSQTHGV LKLQERLCEVVTQQLSIDKSLKRSIGGATLTNFLLKLNQKRGGLNHKVQPDAMIAHLY GEKSNTLIISYDVCHSSGRVYVRGELCDEPSCVGFAYNSTKSREMFIGDFAYQLSRHE RVDEQILKEKTKDILNKYGISHSKAPSSIIILRDGVSEGQHQMVYDDEFPSIEQAVTE FVQEKNKFFKEKKMNIVLSQPSIALLVITKRHANRLYEKNEQGAIKNVSPLLAVDTVV VKKAGNEMLFVSHCPLKGTAQFIAVHIIVNQKVFSKNDEIVRLLAALSCARQVSTSVV SLPESIYAADDYAKRGADLFREWRLLMGAEVPTLHTENGMQFDWRAITERLNYQNSIF KNIRIA" gene <1079605..>1080095 /locus_tag="CAEBREN_03228" /db_xref="WormBase:WBGene00141953" mRNA join(<1079605..1079672,1079716..1079827,1079871..>1080095) /locus_tag="CAEBREN_03228" /product="hypothetical protein" /db_xref="WormBase:CBN03228" /db_xref="WormBase:WBGene00141953" CDS join(1079605..1079672,1079716..1079827,1079871..1080095) /locus_tag="CAEBREN_03228" /note="contains similarity to Pfam domain PF02171; contains similarity to Interpro domain IPR003165 (Stem cell self-renewal protein Piwi)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54186.1" /db_xref="InterPro:IPR003165" /db_xref="PFAM:PF02171" /db_xref="WormBase:CBN03228" /db_xref="WormBase:WBGene00141953" /translation="MFALERRRRRQVPEPRNGAHQYMRNLRGANTNTLFIGYTITHGT VDPQTPGVYNNPSTAVFTFNGTRVAEHFTEYFHFQKATIPHIDPVIIRRVTRWMIEDF RAERGLLPDYIIVLRDHVRDDMQSTVGFGLGV" gene complement(<1080295..>1080932) /locus_tag="CAEBREN_22659" /db_xref="WormBase:WBGene00161384" mRNA complement(join(<1080295..1080475,1080523..1080749, 1080852..>1080932)) /locus_tag="CAEBREN_22659" /product="hypothetical protein" /db_xref="WormBase:CBN22659" /db_xref="WormBase:WBGene00161384" CDS complement(join(1080295..1080475,1080523..1080749, 1080852..1080932)) /locus_tag="CAEBREN_22659" /note="contains similarity to Interpro domains IPR000988 (Ribosomal protein L24e), IPR011017 (TRASH)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54200.1" /db_xref="InterPro:IPR000988" /db_xref="InterPro:IPR011017" /db_xref="WormBase:CBN22659" /db_xref="WormBase:WBGene00161384" /translation="MRIEKCYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKK NPRKLRFTKASRRARGKELINDATQLLEQRRDEPVKYERALFQKTVEAAKTISALKTK RYGNLIRKRLQPGKIVQKKGLLAKVDKKMHLIRAPVANKEGIKTRAAAKEKKTAEAME TN" gene complement(<1081878..>1084258) /locus_tag="CAEBREN_06043" /db_xref="WormBase:WBGene00144768" mRNA complement(join(<1081878..1081965,1082014..1082132, 1082206..1082490,1082534..1082770,1082815..1082868, 1082914..1083058,1083106..1083364,1083414..1083642, 1083693..1083893,1083943..1084125,1084178..>1084258)) /locus_tag="CAEBREN_06043" /product="hypothetical protein" /db_xref="WormBase:CBN06043" /db_xref="WormBase:WBGene00144768" CDS complement(join(1081878..1081965,1082014..1082132, 1082206..1082490,1082534..1082770,1082815..1082868, 1082914..1083058,1083106..1083364,1083414..1083642, 1083693..1083893,1083943..1084125,1084178..1084258)) /locus_tag="CAEBREN_06043" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR016130 (Protein-tyrosine phosphatase, active site), IPR013846 (mRNA capping enzyme, C-terminal), IPR012340 (Nucleic acid-binding, OB-fold), IPR001339 (mRNA capping enzyme), IPR000340 (Dual specificity phosphatase, catalytic domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54105.1" /db_xref="InterPro:IPR000340" /db_xref="InterPro:IPR001339" /db_xref="InterPro:IPR012340" /db_xref="InterPro:IPR013846" /db_xref="InterPro:IPR016130" /db_xref="WormBase:CBN06043" /db_xref="WormBase:WBGene00144768" /translation="MAPRGPTPDKARLGLPDRWLHCPNTGTVVNNLFFPFKTPLCKMY DPQIAEKRLQFHPADVFKSPYLQGRRIGLWIDLTKTDRYYFSEEVTEKNCIYKKIPMA GRGMSPTVEETKTFVDMVQQFHAENPDLLIGVHCTHGFNRTGFLIAAYLFQVEEYGLD AAITEFSSSRQGGIYKQDYFDDLYERYEPHETDRLVAPEKPDWERSEGNGAAFHSIDN GASDSSQNAANMNGNSNHNGNRQDNKGASGDKQFMDGLVDGVTWCQDAGKKSMLQAKI QELCKNNKQGFPGLQPVSLSRDNIKLFEEESYMVSWKADGMRYIVYINDGEVYAFDRD NEVFEIPNLDFVGNDNLPLDGTLVDTEVIIDEVNGVKLPRMLIYDIMRHKGVNIMKEP FIKRFEIIQKEIIDKRTSAFKSGRLHHEKQIMSVRRKDFYDLSATAKLFSYEFKRNVK HEIDGLIFQPKHRPYETGRCDRVLKWKPPSHNSVDFQLKIEKYVTLEEKYRTKLIPRF CGEGMLPEWIGFLYVQNQREPFGQMKATASLKQYNNKIIECTLKVNERGQPMGWEFMR ERTDKSLPNGLRTAQNVLTTMLQPVTEQYLLEHINRAIARKRHLMEQQLQQQQNAKRQ RV" gene <1084950..>1089452 /locus_tag="CAEBREN_16954" /db_xref="WormBase:WBGene00155679" mRNA join(<1084950..1085132,1085185..1086130,1086174..1086291, 1086336..1088302,1088350..1088993,1089042..>1089452) /locus_tag="CAEBREN_16954" /product="hypothetical protein" /db_xref="WormBase:CBN16954" /db_xref="WormBase:WBGene00155679" CDS join(1084950..1085132,1085185..1086130,1086174..1086291, 1086336..1088302,1088350..1088993,1089042..1089452) /locus_tag="CAEBREN_16954" /note="contains similarity to Interpro domain IPR015943 (WD40/YVTN repeat-like-containing domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54230.1" /db_xref="InterPro:IPR015943" /db_xref="WormBase:CBN16954" /db_xref="WormBase:WBGene00155679" /translation="MSNDEVAHDVSQVTDFHFHTCRKFRLFSEKPGTSVDGAIVRNRL ATSSQLGVTFALVTANQMVCFPTKSLINYKLTRENMNVEVTELDVKTINLAGVEQVND VGINSDGTLLAVLHTRNNDVSVEVFDIKTLCTSPNSGSFKSLCSTRVGTEQTNQGSCL EWNPAFPDTFAAASTDRSIMVAKINPQNPSSQTLIGIGKLGAVTTAISWSPKGKQLTI GDSLGKIVQLKPELDVVRSQFGPEHNPAYGKVTGLCWLATTEWLVSFERGTDHDAYLM RCKKDKKTEWMQYHELSYSSSKWPLPPQLFPATAILVDWNVVIVGNSKTSEISTVGKR EDWQTWVSVEGEGIYLPTTASGKDTIPIGLAIDRSMTEEVLLKPDGSQKHRPSPLVMC LTNDGILTAHHIISTFPAHNPCQIASQCIPIAGLSKQQFETTAAPAATSPFSQLAAKP STIFEQKPQLEPISATPKTTSAIPPSLASSAAPKTGGLFGLTSTPTPSTPFGISKPAA APSLVSTPKAAPVLATPVKTESSPPAEVHTPEDKKAERLAAQKKVLVERVVAMNKTMS TTKDSIMKMSFAVGTLKSTVRECAETVKSSLSDSKEVMDELRYLILAIERMSDRTQHT VKEMDFEIDEKMELVTGVEDGERVLEKLRNMSETEKLMRFNKLETSADLLKNNFEECC DKMKKLKMTLSEKESLRKQAVLSPLRHNSNLNQLRSGAESDVALKVLRNVSKIIVDTR EKIQQTELEFVRFRREASKGASKNANKKNTTIHQPSEMSILEGDAPQRATISDADIVK ARQALVARIQKRGTVKTRNVNVESYKKISVASKKKDDPIDTSNLSNAILKLSMTPRRV MTTSSFLPSTDCSTSKKSDAATQADEPPIIQKVVVTVETPAKPVTTAPVTSVPVSKPA TTTTTSTIATPSISVKKEEVKEQKPSASLPMSSSIFSGSLFGSKTSQASTGTSSLLAP EKSSIFNSSLTLSPPEPTKTAPKVTPESAAVKEEQPTTETPKEPVKEVPKVKEEKEEA PKAEEAKVVPEASVPAVTTPTTVPVAVEEKKEESTPKTASFSFNSTPSTTTSTSSIFG GGLKQTPGSTNTSSIFGGSAQATPVTAAKASSIFGGAAAQKTPVSTSNTSSIFGGGAK AASSPFGNFGQNAQATQAQNTPSAASAVSFSFNTGAAPAPAKSTGFGSFGSGAPAKPS SVFGGGVTAPTVPNVDDGMEDDSVVSGGGPGGFMSGLGNSGSTNTSSSGNNPFAPKPS TTSTTNSSWLFGGGAKPQEQTQQKPSFSFANPSTNQPAASTSTSSVFGAGPKFGSQPV FGSKPFGGGAASGSSGLSKNASIFGGAVSSSPNAPATGGFAQFATGQKTSSLFGGGAT TQNQQANTSIFGGGAQTPAASSSSIFGGGSSANANKPSSFSSWR" gene <1089844..>1090534 /locus_tag="CAEBREN_03447" /db_xref="WormBase:WBGene00142172" mRNA join(<1089844..1089905,1090036..1090135,1090199..>1090534) /locus_tag="CAEBREN_03447" /product="hypothetical protein" /db_xref="WormBase:CBN03447" /db_xref="WormBase:WBGene00142172" CDS join(1089844..1089905,1090036..1090135,1090199..1090534) /locus_tag="CAEBREN_03447" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54203.1" /db_xref="WormBase:CBN03447" /db_xref="WormBase:WBGene00142172" /translation="MVSNNSRPRPLWILKIHQRVSINKFKRHARKIAEEDDICYVLKA KDLKKKNVYQVTVETMENCGTPECEKIIWVPEGLAKATGEMFEKFEEEEDEQDPETTS IDTVSDTETSEDDEITEEIEKEYEEMRAAESFDPYAPDSEDEDDIENLLDFSGLDNET KETTI" gene complement(<1092053..>1093000) /locus_tag="CAEBREN_29095" /db_xref="WormBase:WBGene00191060" mRNA complement(<1092053..>1093000) /locus_tag="CAEBREN_29095" /product="hypothetical protein" /db_xref="WormBase:CBN29095" /db_xref="WormBase:WBGene00191060" CDS complement(1092053..1093000) /locus_tag="CAEBREN_29095" /note="contains similarity to Pfam domain PF00578; contains similarity to Interpro domains IPR012335 (Thioredoxin fold), IPR000866 (Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54267.1" /db_xref="InterPro:IPR000866" /db_xref="InterPro:IPR012335" /db_xref="PFAM:PF00578" /db_xref="WormBase:CBN29095" /db_xref="WormBase:WBGene00191060" /translation="MSQHQMKTQEELEREVRLKIAEEMRIEKEKKKKEQEMMEEIRMR VTEELRIEEQKKREEMERKARRELEDAKKAEQLRLEKLKKKEEEDRKKKALEEEKRKK IEDAKRAEELRIRKQKEEEDRKKKELEEQEKKRKIEEEKKQRAIAIENAKKAEELRIQ KQKEDYKKNNPCLFITAGVRMYRHADPEFYYERDALDGKLIGLLFSGSWCQPCLNFIP YLKNFHAQVKEDFEVLFISSDRSEQEMDLFLQNYHGDWYNFEFGSCEGIRLSNNLGVK SIPTLLVFKPNGTYQNVNKTNEVMNCQNPQALVNQWKNM" gene <1102028..>1103384 /gene="Cbn-dhs-4" /locus_tag="CAEBREN_08220" /db_xref="WormBase:WBGene00146945" mRNA join(<1102028..1102297,1102382..1102499,1102545..1102618, 1102675..1102770,1102979..1103259,1103306..>1103384) /gene="Cbn-dhs-4" /locus_tag="CAEBREN_08220" /product="CBN-DHS-4 protein" /db_xref="WormBase:WBGene00146945" CDS join(1102028..1102297,1102382..1102499,1102545..1102618, 1102675..1102770,1102979..1103259,1103306..1103384) /gene="Cbn-dhs-4" /locus_tag="CAEBREN_08220" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR013968 (Polyketide synthase, KR), IPR003560 (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR), IPR016040 (NAD(P)-binding domain)" /codon_start=1 /product="CBN-DHS-4 protein" /protein_id="EGT54159.1" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR003560" /db_xref="InterPro:IPR013968" /db_xref="InterPro:IPR016040" /db_xref="WormBase:CBN08220" /db_xref="WormBase:WBGene00146945" /translation="MLDLILEILCLFFNVIQWSLISLSKYILPYSMLPKKDLHKQKVL ITGAGSGLGKLLTRKFADRGAVLILWDVNLKSVDELKDEIRGNGGEAHSYEVNLCDPR RIAEVGQQVLRDIGKVDILINNAGVATAKMIMDTTERDIDVSFGVNVKSHFFTVQQFL PPMLEENHGHIVTIASAAGKMGSAGLADYTSSKHAAVGFHDSLVAEVMASGKDGIKTT LVCPYYVHTSMFDATGATTRFPSIFPILDTDYVVQKIFEAIETEQEYLVTPSGLYFVF PGVQILPYKAQKAIGEFFGLIQSLDRFHK" gene complement(<1103582..>1104988) /locus_tag="CAEBREN_32152" /db_xref="WormBase:WBGene00194117" mRNA complement(join(<1103582..1103807,1103927..1104517, 1104671..1104895,1104948..>1104988)) /locus_tag="CAEBREN_32152" /product="hypothetical protein" /db_xref="WormBase:CBN32152" /db_xref="WormBase:WBGene00194117" CDS complement(join(1103582..1103807,1103927..1104517, 1104671..1104895,1104948..1104988)) /locus_tag="CAEBREN_32152" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54282.1" /db_xref="WormBase:CBN32152" /db_xref="WormBase:WBGene00194117" /translation="MSFELNDEMSTMEIFKKSQESVELKELISKSSIVISNLLIGNFY DFVDINIARKEKEFSGWMIHDLEKCYEDDEDMEQMVIGDTVFPHSEFNGHKLELYHEN RFEAALSLLKTLLDIFTGPILDAFYMTGTIPTPQISEFIVNTFHCKSIKECEKLMMFE DGISSKTMMDQVLDLATGLKKLDLRCPLPDDWRNPKVLKIDTLIAWPAEWFNTTDLLV NLDCECANINETNLSWKSFKAFMLKWQMTDDTRLKILEVSFDGDWEGFQLDGLETKEW DPEERDSHYPDLIKTPESDWFNCEFATDIPRKDGLLASFWRKTNSFHFVVWHDRRPIA TLRPDPKQLVKLEDLEFADEDEEDDE" assembly_gap 1105759..1105771 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1108167..>1109772) /locus_tag="CAEBREN_19914" /db_xref="WormBase:WBGene00158639" mRNA complement(join(<1108167..1108272,1108735..1108834, 1108880..1109281,1109322..>1109772)) /locus_tag="CAEBREN_19914" /product="hypothetical protein" /db_xref="WormBase:CBN19914" /db_xref="WormBase:WBGene00158639" CDS complement(join(1108167..1108272,1108735..1108834, 1108880..1109281,1109322..1109772)) /locus_tag="CAEBREN_19914" /note="contains similarity to Pfam domain PF03221; contains similarity to Interpro domains IPR006600 (Pogo transposase / Cenp-B / PDC2, DNA-binding HTH domain), IPR004906 (Pogo transposase / Cenp-B / PDC2, subgroup, DNA-binding HTH domain), IPR012287 (Homeodomain-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54253.1" /db_xref="InterPro:IPR004906" /db_xref="InterPro:IPR006600" /db_xref="InterPro:IPR012287" /db_xref="PFAM:PF03221" /db_xref="WormBase:CBN19914" /db_xref="WormBase:WBGene00158639" /translation="MSTSTLLIIAYITSVIKDDPKKPKLDRSDQKLGDRIVSLLRQNE EGFLEMSEETSLTTNAGEVLDENWDPQADLEKDELDFKGIASPQYVLFGKTLVAIEKV WEAVRWYPLQKRARNGGQRRREPSCMYNRFKFLRSEDDLKRLVAYEKAGEIKPDFRAV IAFISERLYEMVIKSINEGHILHDSTLYTMIAEIKDEFKIETSFVGSHHWLNNWKRAH RISSRKITRFVSKKKFMEKEAVQEEMDQFVKLARKTFEGYDPLRVYNLDQSGFQKELY TKRTLTETCSQDVEIITSSASGVTHSYTVLPMLRLDGVLHPNLLDTLLSNVSRMESLR VVCGWIYGSTTTSVRQAD" gene <1111670..>1116144 /locus_tag="CAEBREN_21050" /db_xref="WormBase:WBGene00159775" mRNA join(<1111670..1111794,1112737..1113091,1114064..1114172, 1114219..1114471,1114519..1114647,1114868..1115000, 1115053..1115377,1115606..1115756,1115800..1115953, 1115998..>1116144) /locus_tag="CAEBREN_21050" /product="hypothetical protein" /db_xref="WormBase:CBN21050" /db_xref="WormBase:WBGene00159775" CDS join(1111670..1111794,1112737..1113091,1114064..1114172, 1114219..1114471,1114519..1114647,1114868..1115000, 1115053..1115377,1115606..1115756,1115800..1115953, 1115998..1116144) /locus_tag="CAEBREN_21050" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54242.1" /db_xref="WormBase:CBN21050" /db_xref="WormBase:WBGene00159775" /translation="MHFSSFPMCTCLFFSSFFGTLFLFFFVFFSGISAYSQCRITNSQ CSNHDDSGTKSSPKTSETKLLDKRSNTGIGVLIQFGNKNIWRMGDHRTEYSSNISSSE CHCQLLSLRALSSGFWNNILIEQLDSLLETSELHHCVWNLTSPKWWKSLEESSKTLGS KITNYEKQVIKNKDNLLTFEATISDIQEKLPQRKKQIEEIMKALNEKRRQVLQKQNEI SGFRLNRTENSMKFKLEKTKKKLDEMKKKKIVQDKKIARLRADIAKSEKSFDKVEREI HKEIQRQMENESKKEEIERRIKIFEVENSGISDEFQKLLINLKEDTDGRGKTNEKRIG ELEVLVSKGTKYLEKLDEKIQNLKEMKPNKHSELVLPIPSIKGSSKRRSKSYDQMKSK KNGSRLEDLKKQIIQLKRESEALHMNKTRLLEEVRSEERDLERYFFSVQKETLQKTAD EYQREADRAAQHLRYAENIRISELNRQERKLQPSIIVDTKDEKREKEYIEKKEKLNDK IRQLEKTTDDQKEELERIRRRLEFLKRQLKSYSELDLVQFENEKTEKGAEIRNLKKKW HEHVMTLNALNKKLQQRVLQREAAMTKANSVVHLTTNVRDERNREIEELQKEIAKTRL KL" gene complement(<1116312..>1118083) /locus_tag="CAEBREN_04558" /db_xref="WormBase:WBGene00143283" mRNA complement(join(<1116312..1117049,1117409..1117776, 1117820..1117964,1118009..>1118083)) /locus_tag="CAEBREN_04558" /product="hypothetical protein" /db_xref="WormBase:CBN04558" /db_xref="WormBase:WBGene00143283" CDS complement(join(1116312..1117049,1117409..1117776, 1117820..1117964,1118009..1118083)) /locus_tag="CAEBREN_04558" /note="contains similarity to Pfam domain PF00046; contains similarity to Interpro domains IPR001356 (Homeobox), IPR012287 (Homeodomain-related)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54179.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR012287" /db_xref="PFAM:PF00046" /db_xref="WormBase:CBN04558" /db_xref="WormBase:WBGene00143283" /translation="MVPFKPSDRIRRTNQDGAEGSYRYELRKCNQKSLDEECILDDYE RNDEFNAESSTAFYNHPEAKENSDCTLEYVPSDDETLANYPLRKTSYCVKVAIGDLFS RNPHPSVSEMNELTEFYSVKYRTIFETMEMKRNSQKIICNRGDNCERIRDYFRQQSVE PYASPTLPPDVKQLLETLIENQILTKKRFELGYVHMVMEKTNLPFGAVRSSYVKWRKR LLSSGIPGYTIEAWRHDHRHADHAKVFTHDSIRKMEVAYLKKKYESENKEWTDEEFTS LSTQLGGIPVDKIAAWFQDRNTVALDSSYLDPDPPEAHLTRYQPRTAFRIPVNKIKCL KEVYTHNSHPSKLEFQQIAENLDIEEITVRRFYQRNRGILKRKVELEEAKFEINKLEA DKFEMLENVAADKTKKKAAELMELADTIGISYRSLRIFIDWKKSLKKNK" gene complement(<1118397..>1121020) /locus_tag="CAEBREN_24991" /db_xref="WormBase:WBGene00163716" mRNA complement(join(<1118397..1118918,1118964..1119469, 1119513..1119684,1119728..1119870,1119918..1120261, 1120306..1120664,1120712..1120858,1120904..>1121020)) /locus_tag="CAEBREN_24991" /product="hypothetical protein" /db_xref="WormBase:CBN24991" /db_xref="WormBase:WBGene00163716" CDS complement(join(1118397..1118918,1118964..1119469, 1119513..1119684,1119728..1119870,1119918..1120261, 1120306..1120664,1120712..1120858,1120904..1121020)) /locus_tag="CAEBREN_24991" /note="contains similarity to Interpro domain IPR001917 (Aminotransferase, class-II, pyridoxal-phosphate binding site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54222.1" /db_xref="InterPro:IPR001917" /db_xref="WormBase:CBN24991" /db_xref="WormBase:WBGene00163716" /translation="MEANKREIVETGGIKSYLFSNLAQYVTKNAELLQKTPKQANSLA AFVIGVSAERPTKDDILEMIIPNGANAAVLAAGMDVCFLLGEEYRTNFQTAGEQLAQL NHSHDILAAVDDKKKLESLLRKTKIRKTPDAKILQRILTVHLEREEPLEKFEELSELC ALDLDFDAYVLIKLLDIENEETAEEIEVVRENIQEIFQKANPLLKQLMEQGPQTEPAD EFTELLRAPIGDDCLTKLVAKIVEKFEGALKDESDESLVLRTQLGYQLCFLISRTLAA DLVDAAKLVQKLIPKNIRHEVFPGLQKSVYKSSVFLAFHVIQIFLGSKKSLQDWTLVG LTSDLTCVWRRNAIAELVKKFSVAVTEKCFDLDVPLIPQSQEDNNATIDKVTDALRFA LWILEHYGCENDKKSLKELSYLDNATKNRIVDSFKKFVQGIDDKVHSNRIIESVALSC KQESVSAQCSSSNVAQASTSQSSKKSNDISYTREELKTAHKTSNEGTKAQVLNGFNDS NLVGLLAKDSTSLLEIPVDETDSATVLNSAKNIGDGVTAKASDPIQEKPTVHQQVSQS TTEKPPASPIEECFSADGWDSPSKSVALPPNSVLDKEAGLHQETPTADTTITPQPEEK SEQKPNATAETPVGERSRTAWGSGDVTPAPLATPTNDYKVSGFGGATLAKGFGQFGST GGGFGGGGGGGGRGGYGGGDRGGYGGGSRGGYGGGDRGGSRGGYGGGDRGGRGGYGGG DRGGYGQQRGGGYGGGDRGGSRGGYRSNF" gene <1122798..>1125084 /gene="Cbn-ikb-1" /locus_tag="CAEBREN_12189" /db_xref="WormBase:WBGene00150914" mRNA join(<1122798..1122869,1122986..1123109,1123157..1123239, 1123283..1123527,1123574..1123790,1123837..1124106, 1124152..1124283,1124338..1124551,1124599..1124843, 1124893..>1125084) /gene="Cbn-ikb-1" /locus_tag="CAEBREN_12189" /product="CBN-IKB-1 protein" /db_xref="WormBase:WBGene00150914" CDS join(1122798..1122869,1122986..1123109,1123157..1123239, 1123283..1123527,1123574..1123790,1123837..1124106, 1124152..1124283,1124338..1124551,1124599..1124843, 1124893..1125084) /gene="Cbn-ikb-1" /locus_tag="CAEBREN_12189" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR011029 (DEATH-like), IPR002110 (Ankyrin repeat), IPR000488 (Death), IPR020683 (Ankyrin repeat-containing domain)" /codon_start=1 /product="CBN-IKB-1 protein" /protein_id="EGT54143.1" /db_xref="InterPro:IPR000488" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR011029" /db_xref="InterPro:IPR020683" /db_xref="WormBase:CBN12189" /db_xref="WormBase:WBGene00150914" /translation="MPSADENGVHSVENDLQKSKSDTEIRSTPSSVHKSSSQHRRLFI EDISTCEASAGDRVWATCSGAGNPTDAVNIHFLGDQFEEAAVDIVRKHSLIMFTVPSI KIETEFELELRFSTSDDNVTTIPFKYFPRIQRSSMQEINLFDNLLEFATNGDTISLLQ PFVSQISKQDIEGNTVFHVAAKNGQSFSLKLLLSVLPSVMKDEVINIQNNHGLTALHC AIRAGDPDAVHYLMNHGAKINISDHHGNTALHYLGDAYNESIFKEVLEPSRGQRFDVN QLNSEGFAPIHVAVRRLKLSLIEMLLEAGALIDFLDTEKKRNALMHAIEMNDFETIQL LVERGSATNIEDDSGETALSLAVKNVNYPVIGLLLDNGADPNRQNSKGVCLADTDDNT IQNIINGDRPELPKKESFAVPNDLAISRSPLFGRSHPDQTPPEESGRNRVVKRSREEI LNDAQTLLNETDSMTPRLSRISISESDDEQQPGPSTSSGVSRRRRTEWDRNPKLSDSV CNLDYLTRIRVSKIFDDQCKWQRLAQQLDCDHMIELISICSAGDDSSPTMILLDQFEQ LQDSSISRLREAMNRMDEEDAVKLVDSRYIY" gene <1125723..>1126360 /gene="Cbn-rpl-14" /locus_tag="CAEBREN_00027" /db_xref="WormBase:WBGene00138752" mRNA join(<1125723..1125827,1125932..1126126,1126253..>1126360) /gene="Cbn-rpl-14" /locus_tag="CAEBREN_00027" /product="CBN-RPL-14 protein" /db_xref="WormBase:WBGene00138752" CDS join(1125723..1125827,1125932..1126126,1126253..1126360) /gene="Cbn-rpl-14" /locus_tag="CAEBREN_00027" /note="contains similarity to Pfam domain PF01929; contains similarity to Interpro domain IPR002784 (Ribosomal protein L14)" /codon_start=1 /product="CBN-RPL-14 protein" /protein_id="EGT54235.1" /db_xref="InterPro:IPR002784" /db_xref="PFAM:PF01929" /db_xref="WormBase:CBN00027" /db_xref="WormBase:WBGene00138752" /translation="MVFNRVVQIGRVVFIASGNDQGKLATIVNVVDGNRVQIDGPSSG VSRTVRNLKDLHLTKFVLKIRVGQRSKGVQTAFDAAKVTENFQKTLWAKKIAQRAIRA KLTDFERYKLMKAKQMRNRIVRVELAKLKKAQK" gene complement(<1126430..>1126867) /locus_tag="CAEBREN_04941" /db_xref="WormBase:WBGene00143666" mRNA complement(join(<1126430..1126690,1126739..>1126867)) /locus_tag="CAEBREN_04941" /product="hypothetical protein" /db_xref="WormBase:CBN04941" /db_xref="WormBase:WBGene00143666" CDS complement(join(1126430..1126690,1126739..1126867)) /locus_tag="CAEBREN_04941" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54338.1" /db_xref="WormBase:CBN04941" /db_xref="WormBase:WBGene00143666" /translation="MRFLHSLVVLLLLIVYYSQFSEAIECLHYRVAQGQPILKAERNP RCHSKAEYCVKITGNSLNGNQPFFSGRCEHAGECKEYGDDCFARTDAQGKEEEVCCSS GNFSNQESHLSFLSTIVLFITLRILAF" gene <1128908..>1130010 /locus_tag="CAEBREN_10849" /db_xref="WormBase:WBGene00149574" mRNA join(<1128908..1128931,1128975..1129364,1129408..1129685, 1129795..1129894,1129939..>1130010) /locus_tag="CAEBREN_10849" /product="hypothetical protein" /db_xref="WormBase:CBN10849" /db_xref="WormBase:WBGene00149574" CDS join(1128908..1128931,1128975..1129364,1129408..1129685, 1129795..1129894,1129939..1130010) /locus_tag="CAEBREN_10849" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54146.1" /db_xref="WormBase:CBN10849" /db_xref="WormBase:WBGene00149574" /translation="MNREQIESAFAKSMEHALEVIGNTTAVYLPILGGKSIELSISCM EEYLKMLKELQHDYENTATSQSCMSPMHNDSMLIHRNRLSRTSKARLTVFRASPEAIR ASGSPMEIDMQSVSHIDAIVEESSVLDPSIMMGETTHQRGFLADVSELNGTVRTRNPS FNFNYLSPVASEKSRRASIIVRPMTDTTSDFDDSFVEAVSRTISIRRPRAHAGGEALR SIFSMNSDELKTPRAHNMTIDLTDSDATPTNLNLWNVKLRPGSNRKIDNEIRNEIQRQ LARDAEVSNQQ" gene complement(<1130171..>1131296) /locus_tag="CAEBREN_16027" /db_xref="WormBase:WBGene00154752" mRNA complement(join(<1130171..1130294,1130433..1130842, 1130889..1131057,1131106..>1131296)) /locus_tag="CAEBREN_16027" /product="hypothetical protein" /db_xref="WormBase:CBN16027" /db_xref="WormBase:WBGene00154752" CDS complement(join(1130171..1130294,1130433..1130842, 1130889..1131057,1131106..1131296)) /locus_tag="CAEBREN_16027" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54172.1" /db_xref="WormBase:CBN16027" /db_xref="WormBase:WBGene00154752" /translation="METNLSESTLERIKEGCKFRDENYYLEWMRYMDLIAQVHSIVLT QKNMYVLRCWRGDKFGPRNRALEVESNLFRVTQNYFKQYIAPPDARIGRAVENLGKEC LMEIVVYDEHIASLTGIKSGDFVALKNVHGNVNVRLPHSHTLSMHRGDGDGRNRGISV IPNDFRGERNLNLLREKIKWRLGNVTDHEGFKEFVTDEQFLPRGNQVAGEDYTDEEIE EILREQNEEGVGRNNVIEPTPSMRPTEANVSGKETGTFISTANREDTQTDDVEDAGEG PSNHEEAPFEERPSKRFRREI" assembly_gap 1132240..1132620 /estimated_length=381 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1134112..>1135991) /locus_tag="CAEBREN_18046" /db_xref="WormBase:WBGene00156771" mRNA complement(join(<1134112..1134319,1134580..1134950, 1135689..1135783,1135835..>1135991)) /locus_tag="CAEBREN_18046" /product="hypothetical protein" /db_xref="WormBase:CBN18046" /db_xref="WormBase:WBGene00156771" CDS complement(join(1134112..1134319,1134580..1134950, 1135689..1135783,1135835..1135991)) /locus_tag="CAEBREN_18046" /note="contains similarity to Pfam domain PF00782; contains similarity to Interpro domains IPR020422 (Dual specificity phosphatase, subgroup, catalytic domain), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000340 (Dual specificity phosphatase, catalytic domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54404.1" /db_xref="InterPro:IPR000340" /db_xref="InterPro:IPR016130" /db_xref="InterPro:IPR020422" /db_xref="PFAM:PF00782" /db_xref="WormBase:CBN18046" /db_xref="WormBase:WBGene00156771" /translation="MSRNVGVLGQMSEINDHLYLSGAGVLKPEKIKQRKINMIVNATT EEPSTYMQGVDTMKIRIEDHPYARLSEHFDVVADKIRNVKERGGKTLVHCMAGVSRSA SLVMIYLVKHEHMTLRQAYHYVKAARPIIRPNIGFWKQMVDYEKRLRGTASIKMIQTP ECDMPIPDVYADDLRRMQINREIARHSLPSAQPSSSSSSTKQRAFSASTYRPSPTSAS SLATSSLRRAYSPSSLPASSLALTTSYSLFSPAPARKPRQSLFSMYSTSPRHNFFSAF " assembly_gap 1135353..1135362 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1138570..1143775 /estimated_length=5206 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1152435..>1152995 /locus_tag="CAEBREN_20666" /db_xref="WormBase:WBGene00159391" mRNA join(<1152435..1152863,1152918..>1152995) /locus_tag="CAEBREN_20666" /product="hypothetical protein" /db_xref="WormBase:CBN20666" /db_xref="WormBase:WBGene00159391" CDS join(1152435..1152863,1152918..1152995) /locus_tag="CAEBREN_20666" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54294.1" /db_xref="WormBase:CBN20666" /db_xref="WormBase:WBGene00159391" /translation="MFVYILSFVGFCSFILVQINCKKKKKEVVEPVVIVAPSPQAQSL GSKLTDLNDNVQMDVTQREDETELVMEEMELEEQQKQMKNGSKGSKPSSAEKSGKKME KSAKKAPLEIDKTQQMSEKEPEKSVEKTQNSFKGEKKENKTSQESLKFYGNSPQKNTG LKYSQDVL" assembly_gap 1153743..1153965 /estimated_length=223 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1154072..>1155570) /locus_tag="CAEBREN_03663" /db_xref="WormBase:WBGene00142388" mRNA complement(join(<1154072..1154249,1154599..1155180, 1155244..1155459,1155503..>1155570)) /locus_tag="CAEBREN_03663" /product="hypothetical protein" /db_xref="WormBase:CBN03663" /db_xref="WormBase:WBGene00142388" CDS complement(join(1154072..1154249,1154599..1155180, 1155244..1155459,1155503..1155570)) /locus_tag="CAEBREN_03663" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54311.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN03663" /db_xref="WormBase:WBGene00142388" /translation="MKILKLPLLALESVLLNCELCDLVQFTFLSKRCFHIAMRMKTPL AVLDIDVSKRFVKCIVRFGKVKKFEWWHYCEENRLRRVSVASIGHRQIETLQFKGRIF SMKEANDEECAKEITNYLEALFHCSIRVVSLFPDDIIAPQRSMLTFYNECQKIYMEGK QKMTYDELWDILENWKPSEKIMINLKIDGENKKLLKWTSPKSLSIYGHSQWINIDMLL NLECINLFDCGLTENDIKVFINHWFHSAGTHFRRMELRWVFPAMNDLTFETLDLEIPL MPYSKERRNRNHICSPFRAINCEDGMDILRGDGLLATVKIFHLFFYFCVWHDRFPDMT GIHIMYPYEPPRV" gene complement(<1156831..>1158438) /locus_tag="CAEBREN_01353" /db_xref="WormBase:WBGene00140078" mRNA complement(join(<1156831..1157139,1157187..1157254, 1157383..1158103,1158157..1158298,1158350..>1158438)) /locus_tag="CAEBREN_01353" /product="hypothetical protein" /db_xref="WormBase:CBN01353" /db_xref="WormBase:WBGene00140078" CDS complement(join(1156831..1157139,1157187..1157254, 1157383..1158103,1158157..1158298,1158350..1158438)) /locus_tag="CAEBREN_01353" /note="contains similarity to Pfam domain PF01435; contains similarity to Interpro domain IPR001915 (Peptidase M48)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54344.1" /db_xref="InterPro:IPR001915" /db_xref="PFAM:PF01435" /db_xref="WormBase:CBN01353" /db_xref="WormBase:WBGene00140078" /translation="MDASCLFKTLLATNWALFLWDQYISIRQYKVHRDAEKRPEEVKE LIGEEDYQKARSYKIDNHLFGFLHSWFNQLVLTAQLVGGYYPFLWYNTSQYPFHVAVF LTINSIIETIVDLPWDLYSTFIIEEAHGFNKQTVGFYFVDKVKKMLVGFALTIPIVYG IEWIVANGGPYFFVYIWLFISVIVLLLMTIYPTFIAPLFDKYFPLPDGDLKTKIEQLA ASLSYPLTKLYVVNGSKRSAHSNAYMYGFWKNKRIVLYDTLLSGNEKEKVQKLYEEAG EKIEETENDKKRGMNNDEVVAVLGHELGHWALWHTLINLVITEVNLFFCFAVFAYFYK WDTLYQAFGFRDTPTIIGMMLVFQFVLALYNQFSHTAQVVHSRSAEFAADEFAAKLGH GDNLIGALTKLGVDNLSMPINDSLYSWCVHTHPPVVERVAAVRAFQSKKQ" gene complement(<1158711..>1160116) /locus_tag="CAEBREN_22635" /db_xref="WormBase:WBGene00161360" mRNA complement(join(<1158711..1158835,1159035..1159384, 1159432..1159712,1159766..>1160116)) /locus_tag="CAEBREN_22635" /product="hypothetical protein" /db_xref="WormBase:CBN22635" /db_xref="WormBase:WBGene00161360" CDS complement(join(1158711..1158835,1159035..1159384, 1159432..1159712,1159766..1160116)) /locus_tag="CAEBREN_22635" /note="contains similarity to Pfam domain PF03909; contains similarity to Interpro domain IPR005607 (BSD)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54382.1" /db_xref="InterPro:IPR005607" /db_xref="PFAM:PF03909" /db_xref="WormBase:CBN22635" /db_xref="WormBase:WBGene00161360" /translation="MSWLLADMKKKMNDAKSTIEQSFKQAAESTNVEGEKEEKTEKDE TVQAETTTETETPQEVPTSQGTQESAAETAKKSMAALFGGLKVGGGVASSKLFEYAKD AGKKLGEVKNAVIENTMLGDLNKEQGEFEKQLQEEQEKLKNIDLPWQGLPDEVLAKKQ MLSLSTDTRNFLRDSAANSEYTFEQQQAMAALLLKEDPNLANVRFQLVPKQVKENQFW QNYFYRIGLIRQSMLAQGKGRTTPTPAATPSASSIVEEKKTEEPMAPKTEEKVPEVLV KQEVKVEEPVVEKKVEEVKQKAESSEEEEEDVKETVLEQPSATGEQTLTSVDEEWERE ILADLNDYEDVVEKTGGKDDDAWEAEIQELLNAE" gene complement(<1160641..>1163092) /locus_tag="CAEBREN_28844" /db_xref="WormBase:WBGene00190809" mRNA complement(join(<1160641..1160765,1160818..1160924, 1160975..1161110,1161160..1161559,1161606..1161650, 1161901..1161969,1162402..1162660,1162713..1162903, 1162949..>1163092)) /locus_tag="CAEBREN_28844" /product="hypothetical protein" /db_xref="WormBase:CBN28844" /db_xref="WormBase:WBGene00190809" CDS complement(join(1160641..1160765,1160818..1160924, 1160975..1161110,1161160..1161559,1161606..1161650, 1161901..1161969,1162402..1162660,1162713..1162903, 1162949..1163092)) /locus_tag="CAEBREN_28844" /note="contains similarity to Pfam domain PF00620; contains similarity to Interpro domains IPR000300 (Inositol polyphosphate related phosphatase), IPR000198 (RhoGAP)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54274.1" /db_xref="InterPro:IPR000198" /db_xref="InterPro:IPR000300" /db_xref="PFAM:PF00620" /db_xref="WormBase:CBN28844" /db_xref="WormBase:WBGene00190809" /translation="MCLYDHDVVFWFGDLNYRLNTDLYGISNDDVRRIASSEKFGDLL QYCQLREQMARGTVFKDFEEPAALPFRPTYKYDCGTSIWDTSEKGRVPAWTDRILTFK KYPQVGLELIRPMESVDSITISDHKPVRALFNLKVKKINESGANSVYEEAIREADRRA NEELPQVQLSSNEVDFGIVNYLEPKTRSVIVQNVGKSKVRFSFKVRPNAQNNQEICEK WLMVTPTHYQIPQGSSMEINLTVSISTDIVRRIQDILRNGQLQEILVLHLENGRDYFI PVTAIYNNSCFGSTLEKLLTIRPKKEVNLIDFEDFADNLPSDDCPQNIPRVIYRLVSA LRVRGAKQLNIVEELDNEVFNRIRSALETGQPDDLSQLASSYMLYSALIRLLDSLDEP IIMEGMFKIIHKEMIKYRNDARQLWTTVRSSLPKPNQAVLELLCLMLREFFSQNYELR GQLSLWATVLFRHDSMDEKTHGMYPTVLQTMCDYAPDVSLG" assembly_gap 1163133..1170723 /estimated_length=7591 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1170902..>1173469 /locus_tag="CAEBREN_00399" /db_xref="WormBase:WBGene00139124" mRNA join(<1170902..1170922,1170970..1171089,1171140..1171223, 1171273..1171366,1171459..1171537,1171998..1172294, 1172486..1172599,1172646..1173156,1173205..1173290, 1173454..>1173469) /locus_tag="CAEBREN_00399" /product="hypothetical protein" /db_xref="WormBase:CBN00399" /db_xref="WormBase:WBGene00139124" CDS join(1170902..1170922,1170970..1171089,1171140..1171223, 1171273..1171366,1171459..1171537,1171998..1172294, 1172486..1172599,1172646..1173156,1173205..1173290, 1173454..1173469) /locus_tag="CAEBREN_00399" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR011991 (Winged helix-turn-helix transcription repressor DNA-binding), IPR000342 (Regulator of G protein signalling), IPR015898 (G-protein gamma domain), IPR000591 (DEP domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54321.1" /db_xref="InterPro:IPR000342" /db_xref="InterPro:IPR000591" /db_xref="InterPro:IPR011991" /db_xref="InterPro:IPR015898" /db_xref="WormBase:CBN00399" /db_xref="WormBase:WBGene00139124" /translation="MMPPLAKIEVLAKRVMEGAQLKTHKYFRIAVPHAITGQQLIALV LERGAPDDEAEASHLASLLLHHGYMFPVIEHGQPFKDDGTLYRLQRPYFWPSQAELVP DVEYAIYLNKRLLRNEQKHGLEEDEVESFNRLADVLAHMWAFIVQQSELQLKQQKEKK KVDKVVFDSEERAFWKIRKPSRGGPNFLEDPYMKTEKKIRRQNAQGYRCLMDRLRFAI KTKPWLKALKASDTMVTWVDQRAEFDPFLHPPQPSNPWISDEASYWNQPTDTSSAEIP TEKRVKRWGLSVQELVKDPIGRQVLETFLESEFSSENIRFWIAIQDLKYAPNEQIYNK AERIREEFLAQGAPAQVNVDSRTLDQTLDCISKAKDASQMRFAFYHSEEHVFTLMAKD SYPRFVRSQIYKAVLTAAQQHGTKRLGWRNFVFNMGTTKKPTTSKPAKPQDSIGTSQA LPKQLSSDSLPVRQAHGVKPDPE" gene <1175106..>1175613 /locus_tag="CAEBREN_18977" /db_xref="WormBase:WBGene00157702" mRNA join(<1175106..1175255,1175300..1175442,1175496..>1175613) /locus_tag="CAEBREN_18977" /product="hypothetical protein" /db_xref="WormBase:CBN18977" /db_xref="WormBase:WBGene00157702" CDS join(1175106..1175255,1175300..1175442,1175496..1175613) /locus_tag="CAEBREN_18977" /note="contains similarity to Pfam domain PF00046; contains similarity to Interpro domains IPR020479 (Homeobox, region), IPR012287 (Homeodomain-related), IPR000047 (Helix-turn-helix motif, lambda-like repressor), IPR017970 (Homeobox, conserved site), IPR001356 (Homeobox)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54368.1" /db_xref="InterPro:IPR000047" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR012287" /db_xref="InterPro:IPR017970" /db_xref="InterPro:IPR020479" /db_xref="PFAM:PF00046" /db_xref="WormBase:CBN18977" /db_xref="WormBase:WBGene00157702" /translation="MSSSNDNSAFIRVIRIKSANGSEKMLEIPAKLDLERPKRPRTVF TDEQLEKLERAFTDSGYLSGATRAKLAESLGLSDNQVKVWFQNRRTKQKKTESKEPAK LTLESTNKTIENYSNFYQNYWTAAAFLSNNEVSS" assembly_gap 1179981..1181245 /estimated_length=1265 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1186094..>1187965 /locus_tag="CAEBREN_10285" /db_xref="WormBase:WBGene00149010" mRNA join(<1186094..1186756,1186837..1187397,1187442..1187595, 1187889..>1187965) /locus_tag="CAEBREN_10285" /product="hypothetical protein" /db_xref="WormBase:CBN10285" /db_xref="WormBase:WBGene00149010" CDS join(1186094..1186756,1186837..1187397,1187442..1187595, 1187889..1187965) /locus_tag="CAEBREN_10285" /note="contains similarity to Pfam domain PF00023; contains similarity to Interpro domains IPR002110 (Ankyrin repeat), IPR020683 (Ankyrin repeat-containing domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54291.1" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR020683" /db_xref="PFAM:PF00023" /db_xref="WormBase:CBN10285" /db_xref="WormBase:WBGene00149010" /translation="MDHSELIAELPEIEKMTAQQRIALARERRRNQLRWNEDRERALP PPRPRRQRLHFAPEVELLEATCRADYAEVERLLNEGANPNLHNDDGLTPLHQCAIDDN QQIMLLLLERGANVNAQDTEQWTPLHAAACCAHINIVKILIQAGANLLAVNAEGNMPY DICDHEETLDVIESEMAARGITQQYIDEMRGAPEKAMLDDMKMLHQQGRELDVRAPDG SSYLHVAAANGYYDVAAFLLTCSVSPTSRDNDSWHPIHAAACWAQPDLIELLCQYGGD IHAKTKNGETPMDLCEDLSTKQVITTLVQTEARRRRHFGVRDSRRQSKKRKKFESPQQ GATTGDNPFSARGAIRRQSLRDRSGLTPARIEAQKEGADILRTWSKEDVSADVHSSQA GSLQHQRESPSKRVLKKYYFQSSQHKQAKPMSPDEWLRKLETNGTADDDLDTTPKRGG GSTRRRQKKVPGDMSDSRNSDGRRQKSTCCCVIC" gene <1188748..>1190019 /locus_tag="CAEBREN_10814" /db_xref="WormBase:WBGene00149539" mRNA join(<1188748..1188750,1189312..1189794,1189842..1189891, 1189941..>1190019) /locus_tag="CAEBREN_10814" /product="hypothetical protein" /db_xref="WormBase:CBN10814" /db_xref="WormBase:WBGene00149539" CDS join(1188748..1188750,1189312..1189794,1189842..1189891, 1189941..1190019) /locus_tag="CAEBREN_10814" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54135.1" /db_xref="WormBase:CBN10814" /db_xref="WormBase:WBGene00149539" /translation="MTSKPKEPHRTTGRKLTMTASSMTSEEEQIDGTKTEDEKSKTEE EPEKPDEKSIETTDEDRKVACGNKKDPKDKSEETPDSKDAKRKEDNKNGEQEIILDET NPHFAFLLGGENRDIQQSVFHARHCLEQTAAFQWTMKKRLAFDEGCWKQLSRRISAIR AEGFDVRVNTRQAKENKQSADRETKLDVIFAKWSAGKPKKKGAE" gene complement(<1190084..>1191776) /locus_tag="CAEBREN_15849" /db_xref="WormBase:WBGene00154574" mRNA complement(join(<1190084..1190152,1190200..1190400, 1190570..1190677,1190722..1190846,1190890..1191240, 1191713..>1191776)) /locus_tag="CAEBREN_15849" /product="hypothetical protein" /db_xref="WormBase:CBN15849" /db_xref="WormBase:WBGene00154574" CDS complement(join(1190084..1190152,1190200..1190400, 1190570..1190677,1190722..1190846,1190890..1191240, 1191713..1191776)) /locus_tag="CAEBREN_15849" /note="contains similarity to Pfam domain PF09412; contains similarity to Interpro domain IPR018998 (Endoribonuclease XendoU)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54220.1" /db_xref="InterPro:IPR018998" /db_xref="PFAM:PF09412" /db_xref="WormBase:CBN15849" /db_xref="WormBase:WBGene00154574" /translation="MRSLLLLLLILVTLTWCQKIPPFAVSNADLLAMAKKLRQVDTNR ARPDQIKLSYQGHTVTRDDSDAASGKLFSKVDTSLFRKPSYELYLNLMDNFNRQTGII EPRVSQSEEKNEVGKFLDYVLETNPMKELYNWFKVKGHPIATSPQVFRFWVGQLWFSH YSRALGRPDTSGFEHVFIGEAKNGEISGMHNWVRFYALENNRTENFDYKGFTVKRFNI MAALKFTWDGLLKRAGSILIGTSPEFDMALYTMCFLSRRGRETCDVELDGCPLQITSF EIMQQNKVYIGSIYPTAGRITDQCRAQNR" gene complement(<1192569..>1193716) /locus_tag="CAEBREN_18732" /db_xref="WormBase:WBGene00157457" mRNA complement(join(<1192569..1192725,1192772..1193374, 1193424..>1193716)) /locus_tag="CAEBREN_18732" /product="hypothetical protein" /db_xref="WormBase:CBN18732" /db_xref="WormBase:WBGene00157457" CDS complement(join(1192569..1192725,1192772..1193374, 1193424..1193716)) /locus_tag="CAEBREN_18732" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54236.1" /db_xref="WormBase:CBN18732" /db_xref="WormBase:WBGene00157457" /translation="MKFLKFAFLIQMNIIKQMDYHEMFLLSLCSSNMHKLMKYLRLRA VNVHYLIMGERIKVWIEQHDNDRSYMAHLKYVPLYKEHREVLLTNIGGSKVQCSITKR VMNDDDNFCSVNHGGESLNLLKSLQNHIEPFFHPSYDSLLQIELEEGEVSIGGLQGIK GSSLSGSPVHTSFLETFYTTYPNQLVSEILSRIKGPIKASSKMFQVDHLSFEDSEHSA PAILENFTGKCLFLYGAHVEDSDMITFLQKWSSKESYHELELLIVCTVSGHYFTYDTV LENFQTKPWDLTKKPKEYVYQSKVAGRSGDAIDCQEAEEIVRDVDGQVASVEVSPRTF IFCVWSEEQLEMKSIE" gene complement(<1194483..>1195902) /locus_tag="CAEBREN_03239" /db_xref="WormBase:WBGene00141964" mRNA complement(join(<1194483..1194636,1194701..1195294, 1195607..>1195902)) /locus_tag="CAEBREN_03239" /product="hypothetical protein" /db_xref="WormBase:CBN03239" /db_xref="WormBase:WBGene00141964" CDS complement(join(1194483..1194636,1194701..1195294, 1195607..1195902)) /locus_tag="CAEBREN_03239" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54160.1" /db_xref="WormBase:CBN03239" /db_xref="WormBase:WBGene00141964" /translation="MKFLKFAFLIQMNIIKQMDYHEMFLLSLCSRRTQNLMKYLRLRA LKVQYWMVKERTKVVISQQDTTDQLYMAHLKDIPLSSMHREVRSVNIGGSKVLCRVKR RKRDSGDVFHNLIHDGNLFNLITSLQNHIQPFFHPTVDVELQIQIEEAEIEFPVLQGV TRSYLYGTAIHTSFLDAFYTVYPDQHSSKIDCRIKGLFKPNSKLFQIDQLLLRFSECS AAKVLEHFNGSYLFLYRADVDAVDLTNFLRRWKSENAYPNLKLLVVKKKRFMQNSILE EFETKPWDLSNRPETYAYQSKVVRSPGSINCVHAHEIVRDNDAMVASVDARVFSFIFC VWSEEQLKMKSNL" gene complement(<1196366..>1197256) /locus_tag="CAEBREN_04999" /db_xref="WormBase:WBGene00143724" mRNA complement(join(<1196366..1196504,1196687..1196769, 1197140..>1197256)) /locus_tag="CAEBREN_04999" /product="hypothetical protein" /db_xref="WormBase:CBN04999" /db_xref="WormBase:WBGene00143724" CDS complement(join(1196366..1196504,1196687..1196769, 1197140..1197256)) /locus_tag="CAEBREN_04999" /note="contains similarity to Interpro domain IPR011001 (Saposin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54168.1" /db_xref="InterPro:IPR011001" /db_xref="WormBase:CBN04999" /db_xref="WormBase:WBGene00143724" /translation="MQFVLLASALFVLVITRGVPIIPSPTIDVLVGPNCHMCEVILNN VRYEYHNNFTNVSVDQLRQSLYQQCDLNLNGFTDQECHKIADKDSADILEQLQEGTSS YRICQRELLC" gene <1200983..>1202923 /locus_tag="CAEBREN_15282" /db_xref="WormBase:WBGene00154007" mRNA join(<1200983..1201175,1201229..1201326,1201380..1201636, 1201684..1201816,1201865..1201934,1201980..1202144, 1202195..1202319,1202367..1202503,1202551..1202725, 1202795..>1202923) /locus_tag="CAEBREN_15282" /product="hypothetical protein" /db_xref="WormBase:CBN15282" /db_xref="WormBase:WBGene00154007" CDS join(1200983..1201175,1201229..1201326,1201380..1201636, 1201684..1201816,1201865..1201934,1201980..1202144, 1202195..1202319,1202367..1202503,1202551..1202725, 1202795..1202923) /locus_tag="CAEBREN_15282" /note="contains similarity to Pfam domain PF00400; contains similarity to Interpro domains IPR000009 (Protein phosphatase 2A, regulatory subunit PR55), IPR019775 (WD40 repeat, conserved site), IPR019781 (WD40 repeat, subgroup), IPR015943 (WD40/YVTN repeat-like-containing domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54317.1" /db_xref="InterPro:IPR000009" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR019781" /db_xref="PFAM:PF00400" /db_xref="WormBase:CBN15282" /db_xref="WormBase:WBGene00154007" /translation="MVMEVDEPAVAATTSQNEQEHQNDVEMDTSEGPIEQDQTFEPVD QINWKFNQVKGNIDADVHTEADVISCVEFSHDGEYLATGDKGGRVVIFQRDQSGKYVK GVRSREYNVYSTFQSHEPEFDYLKSLEIDEKINQIRWLKKKNAANFILSTNDKTIKLW KISERERKIGDDAWNLPRSNRINTSFKGKLQIPSIVPMELIVEASPRRVYGNAHTYHV NSISVNSDQETFLSADDLRVNLWNLEITNESFNIVDIKPANMEELTEVITAAEFHPTQ CNWFVYSSSKGSIRLCDMRDRALCDAYAKIFEEPEDPQSRSFFSEIIASVSDVKFSHN GRYLLTRDYLTVKVWDLNMESQPVETYPVHNYLRTKLCALYENDSIFDKFECEWSGDD KHILTGSYHNLFRSYARGNQGEAKTWEARPQEPHATLRSRFVVPSAKRKRNNLSSSGE TTEEDLSSDQLQFDRKILHTAWHPKDNIIALAATNNLYIFSDV" gene complement(<1203937..>1205406) /locus_tag="CAEBREN_08533" /db_xref="WormBase:WBGene00147258" mRNA complement(join(<1203937..1204076,1205277..>1205406)) /locus_tag="CAEBREN_08533" /product="hypothetical protein" /db_xref="WormBase:CBN08533" /db_xref="WormBase:WBGene00147258" CDS complement(join(1203937..1204076,1205277..1205406)) /locus_tag="CAEBREN_08533" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54217.1" /db_xref="WormBase:CBN08533" /db_xref="WormBase:WBGene00147258" /translation="MLDGVVEKQHESNTLWTTTISRGVANEWREEATGTRLQKTKRYI YKVSYDAQVLVRQTFRRHATPILIATNLTLFLLFLYICRLFPFNK" gene <1207292..>1208712 /locus_tag="CAEBREN_21137" /db_xref="WormBase:WBGene00159862" mRNA join(<1207292..1207300,1207648..>1208712) /locus_tag="CAEBREN_21137" /product="hypothetical protein" /db_xref="WormBase:CBN21137" /db_xref="WormBase:WBGene00159862" CDS join(1207292..1207300,1207648..1208712) /locus_tag="CAEBREN_21137" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54181.1" /db_xref="WormBase:CBN21137" /db_xref="WormBase:WBGene00159862" /translation="MRGKPTTTTKGSRPFPLPSLPQFFIFILSTSHLRLFVLFAHPWY RSSRKRFQKMSSSKTIMPKDNGSTPKSKTSAPAKPKGKDTPANKDQAVALAKPKASSG QLKANSLVAERPQLVLKKTKLTPQQPLRKLIQKAKANTKATAKGIKEIKDSEEQARAN EEAEVKEIAELYNKDKGFVSQAEVDKLYETVINQANHTEEFENSCIEQIKAQNDQITY LADALSSVMNDYNILMDAMKKLSRTHELRPVPLKFQDLRGKCFFCYSPKHAAKFCFQF ASAQLRRAELTKEKRCWICFLSHQEEECPYKKAKRCNCDEDIKHHPEVCLIKASAEAV AQRRAAAMGQKPEEEEEWGEAEA" gene complement(<1209655..>1218399) /locus_tag="CAEBREN_07542" /db_xref="WormBase:WBGene00146267" mRNA complement(join(<1209655..1209819,1218298..>1218399)) /locus_tag="CAEBREN_07542" /product="hypothetical protein" /db_xref="WormBase:CBN07542" /db_xref="WormBase:WBGene00146267" CDS complement(join(1209655..1209819,1218298..1218399)) /locus_tag="CAEBREN_07542" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54398.1" /db_xref="WormBase:CBN07542" /db_xref="WormBase:WBGene00146267" /translation="MINIFNSPIDPSQLDEFAQGRQDENGGDEKIFDVVSSWTLILWM CYPSCPGIGALDPLSSIASNVLFAPELSRNGDTIFLGPPPRWVF" gene <1210142..>1216997 /locus_tag="CAEBREN_32752" /db_xref="WormBase:WBGene00194943" mRNA join(<1210142..1212043,1212384..>1216997) /locus_tag="CAEBREN_32752" /product="hypothetical protein" /db_xref="WormBase:CBN32752" /db_xref="WormBase:WBGene00194943" CDS join(1210142..1212043,1212384..1216997) /locus_tag="CAEBREN_32752" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000477 (Reverse transcriptase), IPR001584 (Integrase, catalytic core), IPR001969 (Peptidase aspartic, active site), IPR008042 (Retrotransposon, Pao), IPR005312 (Protein of unknown function DUF1759)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54215.1" /db_xref="InterPro:IPR000477" /db_xref="InterPro:IPR001584" /db_xref="InterPro:IPR001969" /db_xref="InterPro:IPR005312" /db_xref="InterPro:IPR008042" /db_xref="WormBase:CBN32752" /db_xref="WormBase:WBGene00194943" /translation="MIAVTRQQVTMTKTPQPVAVSNYKKKVTLAVSRAEHLLTQANTL LLMDDEEIQHDNLNHTVDKLLAHKKEMEEIEVEISDVTIDDAEATPAEKAALQDSMES HLAAKFPQLFGKIDAVINELLQRVENPEPVSPTCREGKRGKGSHDSLEDILNEGSPRS TRSTNPSPSRQRQHERPPQQQQGDNRSKASHQKGDMDERMKRMEANMDWFKQAFDELR ADNRRTRQQVDRFNGLAAPPGTARDDVCHISSVPSSVGATRSVEQNMFTRNVNTMGGN QLQWIPNRPQPAGFQQNNTGTHAGFNHTSRFVYSNPVTELQSYGIAREDVDTTIRMEQ MRATLVQSALTALGKFTGEEYDYPSFIAQFDNMVHNNPLIDVKVKQTMLLSLLPPKLI REHQTSDVSEASYFLIRSNLEKQFNRQDTQFNTIADQITAFTFPEDITELRSKLTLFS TMAHKLQAYGFNPNDRYFLRTVVNRFPPRVRRAAGRRLRREDATLNDVIDEVHNVLSE QQGYGTGTPASALGYDDNYVNQIDVNVATQQRQRQGYATKPPAGRPRFIPPAKTTPCR YCDMKSHCAAECKMSVDKKRIAVNKKKLCFNCLSEKHSVMECKSRFSCFHCQRRHFSG HCGAMQDIDEDAKNDPPRVEPMRLQVYKITDAEAQLPFIQLHTPNGRKLLALVDTGAQ TSIISTQTAEMLQLQSVGRRKLLYSGFAGQSPRQWCTFYRLELLDLSGNAWTTCVPSY DQMNVIFRAPEHTLEDQEFIKRNGFDCEGVRDLHKFNGRIIDVILGNNILNKVKDIER NMLFYLPSRRAIEKTIIGFIHHPPIIDDSLVPIDRSKPLSISDDTRELWIHTVNVEDA TTDPADDDNPTHITMRRLDKQLERLWTLDMIGLSPPAIKNSKEALNAELIEEFKKSAT MDKDNKIYVALPFNGRQSELRNNLTIAKVRLKSLLERQLQKDEDRAEYHDIIQKQVEE GIVESIPLSSKSDGPEYFIPHRVVVKEDSLTTKLRIVLDASSHMKNELSLNDCLHPGP SILQSILGIMIRSRLSKFLLMSDIKRAFHQVRIQEQYRDVTKFLWIEDPSKGYTEENL RAFRFTRLPFGVSSSPFLLAVTILRYLELNDRSLNERIKENLYVDNVIFTSNDQEDLR EAYKESKAIFNRMHMNLREYLSNGSSVMEEVAECDRHPDQTCKLLGHQWNSVDDTITI KIATPPKGIPTKRQIVAFCARNYDPSGLISPIIVPVKQLISSMWSKNIGWKDKMPEDL LPTWNSIKDNFNEKTYTIPRQLTTNYEFSTAQLVIFSDASKHSYATAAYIRYGYKDGT FSSGLVFSKSRIRPSNGGPEYTIPRMELMALEIGSNAAVNLSKELHMDLKDVVLFSDS TCCLFWVLSKINNNYGSTWINNRVQKIHNNLMELRQQKLEPTVRYVPSEQNPADIASR GCTVKELKDNELWHYGPEFLSQPETSWPKKLDDTPADPYEFKKQARELAAISDSPSKE LVAQWVVNRVSTATFQHAIPYERTNSLKKLTIWMTKALQWICLLIQRRNKRHPDKPIQ FKDKLLGHFREAFEAGDPLVEQVTVRKLILKCHYQDAEERFNELPPKRLYPILHEDGS WRYKTRFSDSTDTRLTEDMRFPIIVMSNHPLAKLIVLESHEKLNHQGIQDVITDVHQH YWIEHLGRIVKTVRSQCFICQRKHGKTFKYNFNRILPATRTTFAGPFKFIGLDYLGPL QYKRSDGKGKMWILLVSCIFTRAVHLEVVPDNTTISFINGLRRFISRRGVPISILSDN APLFKLAYSMINEDLKTVINQSDELTSYLASTQIKIKLTTPLSPWQGGAYERLVGLVK TTIQKVLSKEVRTFLDMETLVIETEGIINSRPVTPNKKAEDDAPAIRPCDFLNPGVQL ALPEKVDSVFGEIRPGETEKLSRKILEGLGKAKEDLWNQFAQSYFQTLRELKEKGANH SAQTPKPGMIVLVESAKTKSRHHWPLGRIIKVTRSLDGVPRSVLVQCGKHTLEKPVNQ LVPLEDPGDNEDETKISVPQLPTTSVPRILLPQQDTESPQTQPAASTSQPDDQVQPKR KRGRPPKPKADSTAPQPSPSASYKSTTPKESQRALANVGNRVLSTPRPAAASRLREFL PRSAKASSTQAQVTTVQVDEEQSTFLRNVDPPAPGVSRP" gene complement(<1221054..>1225864) /locus_tag="CAEBREN_10381" /db_xref="WormBase:WBGene00149106" mRNA complement(join(<1221054..1221133,1221241..1221635, 1221792..1221875,1222071..1222205,1222253..1222339, 1222672..1222830,1223063..1223152,1223643..1223688, 1223736..1224005,1225810..>1225864)) /locus_tag="CAEBREN_10381" /product="hypothetical protein" /db_xref="WormBase:CBN10381" /db_xref="WormBase:WBGene00149106" CDS complement(join(1221054..1221133,1221241..1221635, 1221792..1221875,1222071..1222205,1222253..1222339, 1222672..1222830,1223063..1223152,1223643..1223688, 1223736..1224005,1225810..1225864)) /locus_tag="CAEBREN_10381" /note="contains similarity to Pfam domain PF00112; contains similarity to Interpro domains IPR013128 (Peptidase C1A, papain), IPR000169 (Peptidase, cysteine peptidase active site), IPR000668 (Peptidase C1A, papain C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54357.1" /db_xref="InterPro:IPR000169" /db_xref="InterPro:IPR000668" /db_xref="InterPro:IPR013128" /db_xref="PFAM:PF00112" /db_xref="WormBase:CBN10381" /db_xref="WormBase:WBGene00149106" /translation="MISEIGGIDHERTRERGRSDYCSTRTHTCCENRDDDCTVPILGD HLCYCDMFCDRGPDGGKYSPPLLLQHHSQETTVVRISRRRAAEKTFKTIRGWTAKVCV FVLWNGSCSIDGDTKEKNCEKCTCQSGLWKCDGTACLIQPDILEKLHTGRFSWTARNY SAFWGRSLSDGIKYRLGTLFPERSVQNMNEILIKPRELPEHFDSRDKWGHLINPVVDQ GDCGSSWAVSTTGISSDRLAIISEGRINASLSSQQLLSCNQHRQKGCEGGYLDRAWWY IRKLGVVGDHCYPYVSGQSREPGHCLIPKRDYTDRRGLRCPSGSQDSTAFKMTPPYKV SSREEDIQTELMTNGPVQATFVVHEDFFMYAGGVYQHSDLAAQKGASSVAEGYHSVRV LGWGVDHSTGRPIKYWLCANSWGTQWGEDGYFKILRGDNHCEIESFVIGAWGKGSKRR RRFKMRKLRRFRKMFK" gene complement(<1227210..>1230065) /locus_tag="CAEBREN_15330" /db_xref="WormBase:WBGene00154055" mRNA complement(join(<1227210..1227476,1227584..1228064, 1228234..1228370,1228420..1228533,1228691..1228936, 1228985..1229110,1229997..>1230065)) /locus_tag="CAEBREN_15330" /product="hypothetical protein" /db_xref="WormBase:CBN15330" /db_xref="WormBase:WBGene00154055" CDS complement(join(1227210..1227476,1227584..1228064, 1228234..1228370,1228420..1228533,1228691..1228936, 1228985..1229110,1229997..1230065)) /locus_tag="CAEBREN_15330" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine-protein kinase domain), IPR020685 (Tyrosine-protein kinase), IPR001245 (Serine-threonine/tyrosine-protein kinase), IPR017442 (Serine/threonine-protein kinase-like domain), IPR010440 (Lipopolysaccharide kinase), IPR000980 (SH2 motif), IPR008266 (Tyrosine-protein kinase, active site), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54304.1" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR010440" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="InterPro:IPR020685" /db_xref="WormBase:CBN15330" /db_xref="WormBase:WBGene00154055" /translation="MAISGVSCCRKSSEDEKSMRQAQTSSDGGGSSSLTKSIEDTGGS NNKSSQSLVRSHQVLKIKLKKITNWSGCSGAHLDDEPFYHGYMSREEAEKLVRTQGEF LLRKTELTKRGEVVVLSVFWDDSAHHLVVEKTNNGLHYLKEFCFENISDLVRYHHQTR TSVYKSGIKLFCWVVREEWQLYHEQINLGKKLGNGEFGEVFQGMLSVGIFTNDVEVAV KTMKGSKVTADERITFLREANLMLKLNHKYVVRLYGVATQQEPIMIVMELCSGGSLKG RIEKKEHEMSSSLKRKYCKQIAKGMRYLEKKQVIHRDLAARNVLLDKSDNCKISDFGL SLFGKLHKEQKLMKVPIRWLAPETLLKGIYSSKTDVWSFGVVMFEVFSRDYPYAEVKV LKELRRKVAHEHLRLQPPSDMPPEDTKIMEMCFEPAETRVSFDQLCKKFVYSPHLLSI PSFRYKDLTSPLPTWNGIANKLVGIGAAV" gene <1230398..>1232240 /locus_tag="CAEBREN_05977" /db_xref="WormBase:WBGene00144702" mRNA join(<1230398..1230981,1231896..1232049,1232094..>1232240) /locus_tag="CAEBREN_05977" /product="hypothetical protein" /db_xref="WormBase:CBN05977" /db_xref="WormBase:WBGene00144702" CDS join(1230398..1230981,1231896..1232049,1232094..1232240) /locus_tag="CAEBREN_05977" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54201.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN05977" /db_xref="WormBase:WBGene00144702" /translation="MYIEEAKDVVMMFTVINYILDLFRTDLDIVSVFANELSSVQALA SQPTIQTAREVGFLGCHGGSNSVADLFNLYNNLNGPLKYADVWPTIDGEVGLLPKLFG AENLFAAKSAWIQEEHLLSSNSRFMLLKKSKLNEDAIISFLKQWLDGGFTRLEMMMIW FETEHWINSEQVLNSFEWTQWDPEKRSSKFEFKPLRRLEFLKRQLKSYSELGLVQFEN EKTEKGAEIRNLKKKWHEHVMTLNALNKKLQQRVLQREAAMTKANSVVHLTTNVRDER NREIEELQKEIAKKRLQL" gene complement(<1232500..>1233419) /locus_tag="CAEBREN_25683" /db_xref="WormBase:WBGene00164408" mRNA complement(join(<1232500..1232836,1232887..1233152, 1233237..>1233419)) /locus_tag="CAEBREN_25683" /product="hypothetical protein" /db_xref="WormBase:CBN25683" /db_xref="WormBase:WBGene00164408" CDS complement(join(1232500..1232836,1232887..1233152, 1233237..1233419)) /locus_tag="CAEBREN_25683" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54228.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN25683" /db_xref="WormBase:WBGene00164408" /translation="MTVEFFKEILAEPALKYYGFLRLDGEEIDAECLDLVMETANSYR DLEIMGTKVPEGYYHENAFKFNDVAYRHAEWVRLEHLFTLRDSFVITLEKHSLTGFDV NTFIKFWIESDHDMVQILKLERRKKFEPAILFDGIIVLVGRNVPFYLVAANTTKQRKY QIMGVGWFGNIIRMYSWEKDQPIKLGNRVFESFEPEYKVLMILNKKKELEEELEKIQS ILETNQDQNVIKKKNAISRELQSVSVELDNYKLVLRDGIYRYT" gene <1234747..>1235805 /locus_tag="CAEBREN_15357" /db_xref="WormBase:WBGene00154082" mRNA join(<1234747..1234952,1235002..1235592,1235649..>1235805) /locus_tag="CAEBREN_15357" /product="hypothetical protein" /db_xref="WormBase:CBN15357" /db_xref="WormBase:WBGene00154082" CDS join(1234747..1234952,1235002..1235592,1235649..1235805) /locus_tag="CAEBREN_15357" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54218.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN15357" /db_xref="WormBase:WBGene00154082" /translation="MKEKVKMNRYTVVNRYFMRDSTDTTQNLCLQFNKLELTFCLLFS DPDEKKVHKCNSFNHNINGITYNFRTGFNSIYVGKTTDVAVMFNLIEYTLNLFRISLD GIWVDTTSVSSMQQLACHPSVQTIPTVFVGGESFSSSKLFELFNNLKGPLLRAYVLAP VEGDVDVIQNLFGAENVYIKKSGWLRKEHLLGSNSRFILLKESNLKEDTLVSFVERWL NGSETRLETMIVYFAADNKIDKELISNSLGGEPWDPAKRSQKFLAEGLWIREIVEGAW SLYSDCEKGLDIERNDGLLATVKVDEQGYGFFFHVWHKRFH" gene complement(<1238099..>1239459) /locus_tag="CAEBREN_18124" /db_xref="WormBase:WBGene00156849" mRNA complement(join(<1238099..1238902,1238955..1239124, 1239173..1239306,1239353..>1239459)) /locus_tag="CAEBREN_18124" /product="hypothetical protein" /db_xref="WormBase:CBN18124" /db_xref="WormBase:WBGene00156849" CDS complement(join(1238099..1238902,1238955..1239124, 1239173..1239306,1239353..1239459)) /locus_tag="CAEBREN_18124" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54184.1" /db_xref="WormBase:CBN18124" /db_xref="WormBase:WBGene00156849" /translation="MSKPGRPNLSLAGKREAAVPQKQNRGGTSNRGAGRGRGGGRGRG AGPRPRQELIQTGGVFSEGLGGEFPSKKKEKDIDAAQFALPSKRPVSGAPSTSDEKKE EVNVEAKASFEGWDELWRSDDESDERALNHLHPKGFISDLKRGNVMPVVLPVDDQSQF LNVINKSARLSLEEDNQVEVEEKKPAHSEAKAQQKRPTAEQLIKMLENSGTDLLHLQL PSVVAAICNKIENSVEVPMEVDNPDEEIPAGIPSAPPPPSGLPQSRTIGKLQVTGNGR LLLQVGGHTIELTSKLTEGKQQGTVLLEIDPEAELKQQQPTSTFSLEPAKTDSSLYHL GNVKYNLVGSMTWSKLNDKTPAVENGTETVREVDMRDEGSIGDDLEKLRKLEEEQSKW ASLASRWAIGLP" gene <1239911..>1240704 /locus_tag="CAEBREN_14743" /db_xref="WormBase:WBGene00153468" mRNA join(<1239911..1240042,1240582..>1240704) /locus_tag="CAEBREN_14743" /product="hypothetical protein" /db_xref="WormBase:CBN14743" /db_xref="WormBase:WBGene00153468" CDS join(1239911..1240042,1240582..1240704) /locus_tag="CAEBREN_14743" /note="contains similarity to Interpro domain IPR004202 (Cytochrome c oxidase subunit VIIc)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54386.1" /db_xref="InterPro:IPR004202" /db_xref="WormBase:CBN14743" /db_xref="WormBase:WBGene00153468" /translation="MLSRQVIRPIVQAVRKGHSSHSPSAVTYTGQGPNSFVNDGWASA RLPFHVTNKWGFAAKAVTFLAIGFWAPFIVVEYQLRKANQ" gene <1241122..>1244485 /locus_tag="CAEBREN_02586" /db_xref="WormBase:WBGene00141311" mRNA join(<1241122..1241214,1241274..1241424,1241480..1241601, 1241650..1241733,1241779..1241888,1242081..1242195, 1242317..1242524,1242573..1242779,1243074..1243340, 1243392..1243539,1243589..1243706,1243754..1243925, 1244247..>1244485) /locus_tag="CAEBREN_02586" /product="hypothetical protein" /db_xref="WormBase:CBN02586" /db_xref="WormBase:WBGene00141311" CDS join(1241122..1241214,1241274..1241424,1241480..1241601, 1241650..1241733,1241779..1241888,1242081..1242195, 1242317..1242524,1242573..1242779,1243074..1243340, 1243392..1243539,1243589..1243706,1243754..1243925, 1244247..1244485) /locus_tag="CAEBREN_02586" /note="contains similarity to Pfam domain PF02469; contains similarity to Interpro domain IPR000782 (FAS1 domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54149.1" /db_xref="InterPro:IPR000782" /db_xref="PFAM:PF02469" /db_xref="WormBase:CBN02586" /db_xref="WormBase:WBGene00141311" /translation="MPPLFFLIFILFTPIKSDLWAETERMPDLQQWRALCGYYAVATA YMKDSNARITVFAPVDDVFTYNPDIRALDQKETLSHIVDSQVVDLTMNKLWDKQTLIR STINSGYTYITQFENNPGNFSYFANAGMLCNHASNQWGIISGEQYLFKICTPMGHRPY PGTALSFIREHDVTVFEERQYNNRDLSQIRDILDRTPDIALVIYGSSAWNGFHTFFIP NDAAFARVVDRNRVDREVLLAHVTSTNRVLFTWPWLYDGGQHYYPSVRFSANIIEDNF KLKLVMRNITDRRTGKWDLYAVSEVYERYSQFRRGAVWAKILVPNIPTQNGVVHIIDN VLGIVSETIDMMIYRNEKTTTLMRYINTIGQIVRNYFSATGGLVTFFAPWNEAFDRIP EQIERRLLRDRIWLEQILKLHIVPAKELTSDEITNETIVNTIDNMRQLYFIKGEWPAN NVTYYVIGGGIKTAIMMDNVAATNGIVHYIERVLGVPYQTLWEIMRNESRLQYSFHMM SNLQLRYSMDPWQVLTPEQNFTFFVPTNEAWQQQPQSLVSRMNDGNHWQALQYVYKRH ILQGQALMYTDLRERTYVMMNDEKVVITRRGRFFELYWPRGNRRARVIEGGEIAGING YMHMIDNVLIYEPDLRAEACSTQPVFFQLLIVSIVMCWRPGWFSHLYTVFFYR" gene <1245281..>1246094 /locus_tag="CAEBREN_02205" /db_xref="WormBase:WBGene00140930" mRNA join(<1245281..1245348,1245396..1245482,1245758..>1246094) /locus_tag="CAEBREN_02205" /product="hypothetical protein" /db_xref="WormBase:CBN02205" /db_xref="WormBase:WBGene00140930" CDS join(1245281..1245348,1245396..1245482,1245758..1246094) /locus_tag="CAEBREN_02205" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR012335 (Thioredoxin fold), IPR000866 (Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen), IPR013740 (Redoxin), IPR000889 (Glutathione peroxidase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54343.1" /db_xref="InterPro:IPR000866" /db_xref="InterPro:IPR000889" /db_xref="InterPro:IPR012335" /db_xref="InterPro:IPR013740" /db_xref="WormBase:CBN02205" /db_xref="WormBase:WBGene00140930" /translation="MSSIYDFTVKNANGDDVTLSEYKGKVLIVVNVASQCGLTNKNYT QLKELLDVYKKDGLEVLAFPCNQFAGQEPSCEVDIQAFVADKFKFEPTLFQKIDVNGD KASPLFKFLKNEKGGFMFDAIKWNFTKFLVGRDGKVIKRFGPTTDPKDMKKDIEEALG ERL" gene complement(<1246203..>1255892) /locus_tag="CAEBREN_32072" /db_xref="WormBase:WBGene00194037" mRNA complement(join(<1246203..1246404,1246451..1246617, 1246665..1247578,1247629..1248502,1248553..1248665, 1255673..>1255892)) /locus_tag="CAEBREN_32072" /product="hypothetical protein" /db_xref="WormBase:CBN32072" /db_xref="WormBase:WBGene00194037" CDS complement(join(1246203..1246404,1246451..1246617, 1246665..1247578,1247629..1248502,1248553..1248665, 1255673..1255892)) /locus_tag="CAEBREN_32072" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002452 (Alpha tubulin), IPR001159 (Double-stranded RNA-binding), IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase domain), IPR014720 (Double-stranded RNA-binding-like), IPR000999 (Ribonuclease III)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54266.1" /db_xref="InterPro:IPR000217" /db_xref="InterPro:IPR000999" /db_xref="InterPro:IPR001159" /db_xref="InterPro:IPR002452" /db_xref="InterPro:IPR003008" /db_xref="InterPro:IPR014720" /db_xref="WormBase:CBN32072" /db_xref="WormBase:WBGene00194037" /translation="MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG ESFTTFFSDTGNGRYVPRSIFVDLEPTVVGFSLVTHAPLPICMTRRPICMYAMDYEFQ LVEEKVPDECFAPEDCDDLQEYIFHEIFEMMNFQLRPKHVPAGIETCPMIHIMPRFEC FKDGLVHLWSSKTVLAYFLSKGGIPLFDKEEVSSHSRLNDEEFTRNTGRLKQSIILNT QFKPSAVRADWFERDAEKREVYFVHNAIRSASYPIGIAARIAKLENTLNKLKNDKRNS YGMPNPEYEATKLEMDKLKEEARAARILKLREPVAGYIDTGLKPDVVAHIAMVTIACH HIRYNFSISVFEEIIQYQFNDRRLIELAFIHSSFRTSYGTPIDHVKNIVNNCGYRRKY GTEEKREKKKGIVSLFNIMGGEIDGEPILHNERLEYLGDAVVELITSHHLFFMLPHHF EGGLATYRTALVQNRNLAKLAKSCRMDEMLQFAHGADLINEADFKHALANSFEAVMAA VYLDGGLGPCDTIFSKAMYGSDPELKQIWDHCNEHELRREDPLGDRELSQITPALASF HELERRLGIQFNNIRLLAKAFTRRNVPNNDLTKGHNQRLEWLGDSVLQLLISDFLYKN FPNHHEGHMSLLRTSLVSNQTQSVVCDDLGFLEFVIKPPHRVPELKVKDKADLVEAFI GALYVDSGIEHCRAFVRIVFCPRLRHFIESEQWNDAKSHLQQWCLAMRKSRNEMPAMP EYRVLGIEGPTNNRIFRVGVYFRGERLSTGAASNVHKAELKAAESALADLESVSASRG NSKSVSFLFSFSSIHKSFFQKKHRRLRRFFF" assembly_gap 1248681..1255412 /estimated_length=6732 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1257555..>1258345 /gene="Cbn-cco-1" /locus_tag="CAEBREN_07765" /db_xref="WormBase:WBGene00146490" mRNA join(<1257555..1257740,1258038..1258137,1258233..>1258345) /gene="Cbn-cco-1" /locus_tag="CAEBREN_07765" /product="CBN-CCO-1 protein" /db_xref="WormBase:WBGene00146490" CDS join(1257555..1257740,1258038..1258137,1258233..1258345) /gene="Cbn-cco-1" /locus_tag="CAEBREN_07765" /note="contains similarity to Pfam domain PF01215; contains similarity to Interpro domain IPR002124 (Cytochrome c oxidase, subunit Vb)" /codon_start=1 /product="CBN-CCO-1 protein" /protein_id="EGT54100.1" /db_xref="InterPro:IPR002124" /db_xref="PFAM:PF01215" /db_xref="WormBase:CBN07765" /db_xref="WormBase:WBGene00146490" /translation="MAQLAKTAVAALSKRLVAPAAVARRTMATEASPEDYGYYPDPLE HATGREKKMLLARLAGDDRYEPKVYYRAEASTKQKPNLVPSHYDFRIIGCMCEQDSGH VNFMTIAKGEPKRCECGHWFKGVDADPESI" gene <1260577..>1262529 /gene="Cbn-hrdl-1" /locus_tag="CAEBREN_06969" /db_xref="WormBase:WBGene00145694" mRNA join(<1260577..1260840,1260888..1261018,1261087..1261213, 1261262..1261405,1261454..1262263,1262314..>1262529) /gene="Cbn-hrdl-1" /locus_tag="CAEBREN_06969" /product="CBN-HRDL-1 protein" /db_xref="WormBase:WBGene00145694" CDS join(1260577..1260840,1260888..1261018,1261087..1261213, 1261262..1261405,1261454..1262263,1262314..1262529) /gene="Cbn-hrdl-1" /locus_tag="CAEBREN_06969" /note="contains similarity to Pfam domain PF02845; contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR003892 (Ubiquitin system component Cue)" /codon_start=1 /product="CBN-HRDL-1 protein" /protein_id="EGT54153.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR003892" /db_xref="PFAM:PF02845" /db_xref="WormBase:CBN06969" /db_xref="WormBase:WBGene00145694" /translation="MGIVSMLSRTPFPSVESYLALSLCVALVASATVFTTFRSQPELQ KLLEEELRNNTRLSTAYGINIEALSGNTLFQIAHYLLSDTSLIWVAINSYFAILAMCT KLIIKLTFKELSRQEETVARQAFFSYILLTVVYLSVVSGPQKGYRVMPWMLWAGICGF LSHLQFVTCQRLKYTSPSCDRGSQKVSFLSLFLFFVSIAMSFMVSRFQNHLEWQPALL LYSDCLLAVFRSTYILFRCISSSRVFSFNPDSVRHFNYWLELITNIVCELIQMLSYFQ LFVVSPGLNLTSVFFLYHMKLTYNCMIEQYSRHCTHKKIFEHIESTYPSVKAANSDDR CVVCWELLGNSRRLPCSHQFHDWCLMWWLAQDSSCPTCRCVIPSPQEELRQSSNEQNT STRLRFNGIQIGFFTFPPFTIELGANLGQFFGRGAEPTEEQLQTMLEQVREMFPQMAT EIILMDLRQSGSAQSTIENILEGRIGMNASFMPALDDDLTDESDNEVEFEEPVEVIQE PDNGRQRTWTKLSSSSGEEDLSYYEIQRAKMIETYRRKYLASDKAADLRAIGITE" gene complement(<1263276..>1264751) /locus_tag="CAEBREN_02970" /db_xref="WormBase:WBGene00141695" mRNA complement(join(<1263276..1263465,1263664..1263765, 1263809..1263898,1263946..1264184,1264734..>1264751)) /locus_tag="CAEBREN_02970" /product="hypothetical protein" /db_xref="WormBase:CBN02970" /db_xref="WormBase:WBGene00141695" CDS complement(join(1263276..1263465,1263664..1263765, 1263809..1263898,1263946..1264184,1264734..1264751)) /locus_tag="CAEBREN_02970" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54407.1" /db_xref="WormBase:CBN02970" /db_xref="WormBase:WBGene00141695" /translation="MGAFDRVKAQVASDSKWTSSPYKGFVAGSPSSTYVDVVSTAFED ATNTMNFARHSKYDEMYTPYLGSFRERHNYTSIAPSLCINRPNRAIEYDLAPHKAYNP RQSEWLLEKDKRYRVRGPRNIIHTKSASDISLPPLTRRTFTVPTDTMRHQNQMLYWNG RALGLDYVAPFLRREDYSRHEDRRYQRIYWSPQFIDLLPSCRHSAHLMLSAY" gene <1266161..>1267674 /locus_tag="CAEBREN_21098" /db_xref="WormBase:WBGene00159823" mRNA join(<1266161..1266863,1266909..1267459,1267518..1267569, 1267616..>1267674) /locus_tag="CAEBREN_21098" /product="hypothetical protein" /db_xref="WormBase:CBN21098" /db_xref="WormBase:WBGene00159823" CDS join(1266161..1266863,1266909..1267459,1267518..1267569, 1267616..1267674) /locus_tag="CAEBREN_21098" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54192.1" /db_xref="WormBase:CBN21098" /db_xref="WormBase:WBGene00159823" /translation="MIVYVVLAIIAAIAYFYFQKGGGANDATAPKSTKSTRSTQKRSS PKKSSVITQQPPRPQPAPIVAAPEPQVVAPPPAPAPEPVAAPAPEPVPAPVPVPEPAP APIPVPEQVQQPAPVPEQQQIPHDPLSSPIRPPIGGNSVMLAPKDNFSSGIGGKSERL APDVGPTQETAPPPVSAPPAAQVESVSLAPKTNDGAQAPQPGGPSSATLPVTSTGDLS KKSKKKKKKSKSKDKKKSAKTSTKNKKKKKKSKNKSTSSAPQSIQSPAQPETGVQTAT EARNDAPESNVNTALSIRSPAPDTPEPDVKTAAEAKNDDPETGVKTAAEEKNDIPESG VKTANEEKNDIPESGVKTAAEDKNDAPESGVKTATEARNDTPEGDVKTASEVKNDAPE SGVKTAKEGGADPKSESNDSTESNISSVSSAVSKQSKKNRKKKKRSKSKNKKSGEKEQ SSSQ" gene complement(<1269225..>1270732) /locus_tag="CAEBREN_22760" /db_xref="WormBase:WBGene00161485" mRNA complement(join(<1269225..1269554,1269600..1269977, 1270583..>1270732)) /locus_tag="CAEBREN_22760" /product="hypothetical protein" /db_xref="WormBase:CBN22760" /db_xref="WormBase:WBGene00161485" CDS complement(join(1269225..1269554,1269600..1269977, 1270583..1270732)) /locus_tag="CAEBREN_22760" /note="contains similarity to Pfam domain PF10186; contains similarity to Interpro domain IPR018791 (Protein of unknown function DUF2355, coiled-coil)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54196.1" /db_xref="InterPro:IPR018791" /db_xref="PFAM:PF10186" /db_xref="WormBase:CBN22760" /db_xref="WormBase:WBGene00161485" /translation="MSCINCSKKRQCCFKSCTLDKSNVLKEYITNRLEQNERLQEKLI VIIDPVETLKLQITEKEDQLIKLRSAIQESKQRLIMKNEEVKKLNSIIKPPPVQSKDV FSSQSEYLKSLAEKIEEKKKQLRIAEETLATTRMECFQQVFRIFPIKIHIVTESNSFE DWVIVNDTEQQKEQITIRNSRTSKNPFTSFKEELTAFSHTFQLVKILIMIFNFFPPKR LPSLRDLCIGDREMPKYSLWISLCDTIIHLCAHIGMTNDKLETSHPYRNLIEMATFLG SDPANFMKF" gene <1271505..>1272467 /locus_tag="CAEBREN_22479" /db_xref="WormBase:WBGene00161204" mRNA join(<1271505..1271868,1272020..1272355,1272403..>1272467) /locus_tag="CAEBREN_22479" /product="hypothetical protein" /db_xref="WormBase:CBN22479" /db_xref="WormBase:WBGene00161204" CDS join(1271505..1271868,1272020..1272355,1272403..1272467) /locus_tag="CAEBREN_22479" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54213.1" /db_xref="WormBase:CBN22479" /db_xref="WormBase:WBGene00161204" /translation="MSTGTDISSYDGGSESSQFSSARSPSCYSRSRLDSFLSSGSSRS AARRRPQSSGSRSGSSRLSTASGSSLKSILKKSNSKKKSTPRRRLSLPKKSKSPAKRS DVRPISQFSMIKNPVIRHQVRGFVGEYSKDPEFEAFSLSVDGIPFVALSLMNAEPELR ERFKKAQPPTPMKKHTPGTNSPRKRLRHRSSSVNSKCVRFTDEGSSPKRAKKSLSAED DKEFRELGETVSDAMIETDRQYNDLWNDRTNSVERQ" gene <1280789..>1290762 /locus_tag="CAEBREN_32174" /db_xref="WormBase:WBGene00194139" mRNA join(<1280789..1280896,1285518..1285667,1285821..1286075, 1286180..1287195,1287330..1287390,1287752..1288047, 1288191..1288880,1288975..1289100,1289193..1289308, 1289770..1289844,1290629..>1290762) /locus_tag="CAEBREN_32174" /product="hypothetical protein" /db_xref="WormBase:CBN32174" /db_xref="WormBase:WBGene00194139" CDS join(1280789..1280896,1285518..1285667,1285821..1286075, 1286180..1287195,1287330..1287390,1287752..1288047, 1288191..1288880,1288975..1289100,1289193..1289308, 1289770..1289844,1290629..1290762) /locus_tag="CAEBREN_32174" /note="contains similarity to Pfam domain PF00169; contains similarity to Interpro domains IPR001849 (Pleckstrin homology), IPR011993 (Pleckstrin homology-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54277.1" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR011993" /db_xref="PFAM:PF00169" /db_xref="WormBase:CBN32174" /db_xref="WormBase:WBGene00194139" /translation="MNDCKRFEANIFNNGKCKICYKSKQSHSSESIENAKMNRKVTAC GFLYVAPPNLDFSMQSHSAKRWQRRWFTLFDSGDLTYAIDNSMDTLPQLSIDMSLCYR VCEAHAITGNAHSILLAFNKTREDQPSIIYIKADTTEEIRWWQNGLSKYANSQNVTIR PPRRGIDELPMSEDTMKDVPSCASSRCSSPVERLEVDRMIEGKELRGSVRSVKQRSLR DEKKESEDGSIPSPSVLPATSNVVINVPVNTCSPQSQPTSTTTSPTTPTISTTPTQKL NIDISNVHTLRKGWLMLRGKSDNDWCKHWVVLAGLQLKLYKDVWAEDSTEPLLTVDLS QCENVYPSASARNYGIEIKCRRTRYVLSAMTPGIRDSWVSALQQNRHHPSPTFTETFS NDANSLADSSDILGLPVVRISPLLWVSITLFQKKKHIAYVAPESHHSNSMMDEHSSTE LEEEEHNTNTARRRRSRRMGSRASESADPRGRGRGESLSPSVRRSPVARVKERRGDMR QRHASNSSAASHQEKPSRDELQRHIGTASRISSDETRLRSLEQQVWNQRRDMNEHSLI LQVENLRTQLDEAKDDSTRRKRDAVNQEIKELRITLKSSEDELQRYRKEVDMLRRQIS QNTQTVTLQRAILSTLRTQLSALSSLLRSSLFLGAVDLFDSLDHILDRISVDLNLEQT EEVLRQTTELFEKVSSAVTIPYLSDSWTMTEQEKEPRERTPEEDIEETIREIRRNHTS EVDSIKSQCEQRLAVLKERAEREEGRRKKLQEQLVMATTRSDESISSVKTSFSQMLAE QRKTFDEELEVVKKEHEERLMEEKHATRLALEAVRRAHEEELKNVAEKSKNGEGSSIG RQSEIFDEMREELINVCALYSAKCLENSQLDEQLANLISEKEASVELSIENDKLRSEI DRKSKEINDLQRKMNNYEKLSQSRTDPEVLAGTTVSRARREKQKKRNRRHDVRFHSNP IEVPQHLIEDVRRSLDVPVSERRKFFEHIAEYSTPF" gene complement(<1290986..>1292532) /locus_tag="CAEBREN_00289" /db_xref="WormBase:WBGene00139014" mRNA complement(join(<1290986..1291334,1291586..1292026, 1292070..1292260,1292305..>1292532)) /locus_tag="CAEBREN_00289" /product="hypothetical protein" /db_xref="WormBase:CBN00289" /db_xref="WormBase:WBGene00139014" CDS complement(join(1290986..1291334,1291586..1292026, 1292070..1292260,1292305..1292532)) /locus_tag="CAEBREN_00289" /note="contains similarity to Pfam domain PF02801; contains similarity to Interpro domains IPR000794 (Beta-ketoacyl synthase), IPR014031 (Beta-ketoacyl synthase, C-terminal), IPR018201 (Beta-ketoacyl synthase, active site), IPR016038 (Thiolase-like, subgroup), IPR020841 (Polyketide synthase, beta-ketoacyl synthase region)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54283.1" /db_xref="InterPro:IPR000794" /db_xref="InterPro:IPR014031" /db_xref="InterPro:IPR016038" /db_xref="InterPro:IPR018201" /db_xref="InterPro:IPR020841" /db_xref="PFAM:PF02801" /db_xref="WormBase:CBN00289" /db_xref="WormBase:WBGene00139014" /translation="MHRVVITGMGAISPYGVTVNALRNGLNEGRSGLKYDEALKFVVG AVPGERVEDRWTAGQQREMSRASMYSLVASEEALKQANAEAIDHEETLVNIGTCMSDL EHIGETAQKVSEGQARRVSPYFVPRILNNLPAGYIAMKYKMRGGVESTSTACATGLHC IGNAFQSIRHGHSLRALAGAVECALNPISLAGFDRMRALARGDQPTISRPFDKKRAGF VMSEGVGIVFMERLEDAKARGAQILAEVLGYGISSDCYHISTPDPSAIGAILSMRRAI GNANLDPIQIGYVNAHATSTPNGDSVEAEAVRKVFPNQNIAVSSIKGHIGHLLGAAGS VEAIATICAMNDNILPANRNLEETDEDCGLNILRENQQWVEPTSQTKISICNSFGFGA TNASIILKQF" gene complement(<1292740..>1293773) /locus_tag="CAEBREN_06736" /db_xref="WormBase:WBGene00145461" mRNA complement(join(<1292740..1293030,1293075..1293545, 1293594..>1293773)) /locus_tag="CAEBREN_06736" /product="hypothetical protein" /db_xref="WormBase:CBN06736" /db_xref="WormBase:WBGene00145461" CDS complement(join(1292740..1293030,1293075..1293545, 1293594..1293773)) /locus_tag="CAEBREN_06736" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002586 (Cobyrinic acid a,c-diamide synthase), IPR019591 (ATPase-like, ParA/MinD), IPR015223 (ATPase MipZ/NubP2/Cfd1), IPR000808 (Mrp, conserved site), IPR003593 (ATPase, AAA+ type, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54354.1" /db_xref="InterPro:IPR000808" /db_xref="InterPro:IPR002586" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR015223" /db_xref="InterPro:IPR019591" /db_xref="WormBase:CBN06736" /db_xref="WormBase:WBGene00145461" /translation="MSDVPEDANAGCPGTGSAGAGKASGCAGCPNQGACATGQGPPPD ADVPKIQDRFSRIKHKILILSGKGGVGKSTLTSNLARALASDPSKQVAILDVDICGPS QPRMMGVEDEEVHNSADGWTPVGIQPNLTLMSIAFLLGDKNDAVIWRGARKNGMIKQF LKDVDWGEVDYLLIDTPPGTSDEHISLVQFLLQAGSLDGALIVSTPQEVSLLDVRKEV SFCIKTKVPILGVVENMARFVCPNCAHTTLLFPTSTGGAEKMCQDSNLELLAQLPLEP ALAKALDNGEDFFETNPDSALAKSFLDLAEKVKAKLN" gene complement(<1294063..>1298588) /locus_tag="CAEBREN_04607" /db_xref="WormBase:WBGene00143332" mRNA complement(join(<1294063..1294207,1295150..1295269, 1296072..1296136,1296410..1296511,1296579..1296650, 1297108..1297352,1298546..>1298588)) /locus_tag="CAEBREN_04607" /product="hypothetical protein" /db_xref="WormBase:CBN04607" /db_xref="WormBase:WBGene00143332" CDS complement(join(1294063..1294207,1295150..1295269, 1296072..1296136,1296410..1296511,1296579..1296650, 1297108..1297352,1298546..1298588)) /locus_tag="CAEBREN_04607" /note="contains similarity to Pfam domain PF03834; contains similarity to Interpro domain IPR004579 (DNA repair protein rad10)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54258.1" /db_xref="InterPro:IPR004579" /db_xref="PFAM:PF03834" /db_xref="WormBase:CBN04607" /db_xref="WormBase:WBGene00143332" /translation="MTKEEEEELEAPEKREDDEEAKEKKKTTQFPSSSSSSDLTGGVG VGGGSGALVVNRRRQEGNPVLKYVRNVRYEWGDIGPDFECGPTFGVVYLSFKYHKQHP EYVYTRINGKAENRYRNKVLLGYCNMEEPRHVLRELNMICFREAWTLVVVYTVEEAAE YIELFKTTQKKEITIKKKVIDDGGDSSISDERRRMREAAIGFLTAARSITKTDADRLL FHFGTLQAISTADETAISACPGVGPIKAKNLHSFLHTVISPNEQE" gene <1304194..>1304897 /locus_tag="CAEBREN_07999" /db_xref="WormBase:WBGene00146724" mRNA join(<1304194..1304304,1304363..1304635,1304709..>1304897) /locus_tag="CAEBREN_07999" /product="hypothetical protein" /db_xref="WormBase:CBN07999" /db_xref="WormBase:WBGene00146724" CDS join(1304194..1304304,1304363..1304635,1304709..1304897) /locus_tag="CAEBREN_07999" /note="contains similarity to Pfam domain PF00036; contains similarity to Interpro domains IPR001125 (Recoverin), IPR011992 (EF-hand-like domain), IPR002048 (Calcium-binding EF-hand), IPR018248 (EF-hand), IPR018247 (EF-Hand 1, calcium-binding site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54190.1" /db_xref="InterPro:IPR001125" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR011992" /db_xref="InterPro:IPR018247" /db_xref="InterPro:IPR018248" /db_xref="PFAM:PF00036" /db_xref="WormBase:CBN07999" /db_xref="WormBase:WBGene00146724" /translation="MGIKGSKPKLSKEDLEFLKKNTNFTEEQIKEWYKGFVQDCPKGH LTKEQFIKVYKDFFPSGSAEGFCEHVFRTFDTDNSGFIDFKEFLLAINVTSSGTPEQK LEWAFRMYDIDGNGTIDEKEMIKIIEAIYEMLGPEVTKSADDSPRKRAKMIFEKMDVN NDKELTLKEFVDGCLADKELFQILTNEVKK" gene complement(<1308322..>1309617) /locus_tag="CAEBREN_25919" /db_xref="WormBase:WBGene00164644" mRNA complement(join(<1308322..1308408,1308474..1309307, 1309373..1309465,1309513..>1309617)) /locus_tag="CAEBREN_25919" /product="hypothetical protein" /db_xref="WormBase:CBN25919" /db_xref="WormBase:WBGene00164644" CDS complement(join(1308322..1308408,1308474..1309307, 1309373..1309465,1309513..1309617)) /locus_tag="CAEBREN_25919" /note="contains similarity to Pfam domain PF00400; contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR019781 (WD40 repeat, subgroup), IPR001680 (WD40 repeat), IPR020472 (G-protein beta WD-40 repeat, region), IPR015943 (WD40/YVTN repeat-like-containing domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54348.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR020472" /db_xref="PFAM:PF00400" /db_xref="WormBase:CBN25919" /db_xref="WormBase:WBGene00164644" /translation="MFGSSSFGNKSLFGGTSMASATTAPASNTQDQDFLVEGAPEDTI QVIKFSPQPQDKPMLACGAWDGTLRVWMLNDANTFEGKAQQNIPAPILDICWTEDSSK IFIACADKEARLWDLASNQVAVVGTHDGPVKTCHWINGNNYQCLMTGSFDKTLRFWDM KNLPNQTQMASITLPERVYAADVLYPMAVVALANKHIKVYNLENGPTEVKDIESQLKF QIRCISIFRDKSNQNPAGFALGSIEGRVAVQYVEASNPKDNFTFKCHRSAELVNGYQE IYAVNDICFHPQHGTLVTIGSDGRYSMWDKDARTKLKTSDSHPMPLTCCDVHSSGAFL VYALGYDWSRGHEGNTQPGSKIVIHKCVDDMKPRAPKK" gene complement(<1311005..>1311559) /locus_tag="CAEBREN_23645" /db_xref="WormBase:WBGene00162370" mRNA complement(join(<1311005..1311062,1311111..>1311559)) /locus_tag="CAEBREN_23645" /product="hypothetical protein" /db_xref="WormBase:CBN23645" /db_xref="WormBase:WBGene00162370" CDS complement(join(1311005..1311062,1311111..1311559)) /locus_tag="CAEBREN_23645" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54229.1" /db_xref="WormBase:CBN23645" /db_xref="WormBase:WBGene00162370" /translation="MEKLQKAFSSLLHRQLHSPTSHAPIIQCDLGQMRSASFILVDIV MRMIELKVKGCYSPEAIFVKMRDQNNHLKIPPDTMKDIYYCLLTHLRELEPTLERFDG AIQKHAMSVPEHDRSKKRIKKYIIPKQWIVDKKERDRFIKKIMKTAKRDSTLSLTSTE IQLPPNTN" gene <1317187..>1320832 /locus_tag="CAEBREN_15984" /db_xref="WormBase:WBGene00154709" mRNA join(<1317187..1317850,1320453..>1320832) /locus_tag="CAEBREN_15984" /product="hypothetical protein" /db_xref="WormBase:CBN15984" /db_xref="WormBase:WBGene00154709" CDS join(1317187..1317850,1320453..1320832) /locus_tag="CAEBREN_15984" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54209.1" /db_xref="WormBase:CBN15984" /db_xref="WormBase:WBGene00154709" /translation="MQDGAKTFKRRATQTLEKANVTIEEAYKLLSINEREISVDNFTN KIKDLLIDKEKLYELEEEIPSIVEDDDGTSPEEKQQILKSLKDHVIPSIRKLVKEIEE AIGHLERRVNSMRTKTHTWSEGTRAPGEQSTINNKDAPSSNNQQQRSRSMPPRVSPTH RQERNTEASERVQQGTESPGVTYPSNGNKRLEDKMDTLLSFLMSSRGNVCNIRSAPTL NDSDQPAKQEKMLIQFQVTPTFISQQDERSHQDSSTCPRNMYDSIPQHQSPKAFPKQC PEGLVNCHVTDSSSCYDGSDMYKRHIYHSSLHGEGRSPSPRSVAAPIPLVSPQLPTSS SLSSLESYIYYST" gene complement(<1321621..>1322692) /gene="Cbn-eak-6" /locus_tag="CAEBREN_17414" /db_xref="WormBase:WBGene00156139" mRNA complement(join(<1321621..1322096,1322146..1322248, 1322591..>1322692)) /gene="Cbn-eak-6" /locus_tag="CAEBREN_17414" /product="CBN-EAK-6 protein" /db_xref="WormBase:WBGene00156139" CDS complement(join(1321621..1322096,1322146..1322248, 1322591..1322692)) /gene="Cbn-eak-6" /locus_tag="CAEBREN_17414" /note="contains similarity to Pfam domain PF00102; contains similarity to Interpro domain IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)" /codon_start=1 /product="CBN-EAK-6 protein" /protein_id="EGT54427.1" /db_xref="InterPro:IPR000242" /db_xref="PFAM:PF00102" /db_xref="WormBase:CBN17414" /db_xref="WormBase:WBGene00156139" /translation="MPFSKISGVEEVYKYLLEKNILLDRFGLWGLVSQETNVHATQNA ISAGHGTTEAERNTELTAVSNVKIYDSRRVKITKSDLNPDGYFDASFLSVPEVNCKYI MTGVPIPSQVPYFWQMVVEQKVPVIVKLTPTIHHLKEYTYFPKQENYKLQCGRYEVKC LKKKSYPSHSYRVLRVSIVSGRDQGHKHDIAHLTLSKWPHEKKFPVADMKQFWKYYTC ESCEFHSK" gene complement(<1323041..>1323749) /locus_tag="CAEBREN_25953" /db_xref="WormBase:WBGene00164678" mRNA complement(join(<1323041..1323237,1323389..>1323749)) /locus_tag="CAEBREN_25953" /product="hypothetical protein" /db_xref="WormBase:CBN25953" /db_xref="WormBase:WBGene00164678" CDS complement(join(1323041..1323237,1323389..1323749)) /locus_tag="CAEBREN_25953" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54303.1" /db_xref="WormBase:CBN25953" /db_xref="WormBase:WBGene00164678" /translation="MVTGYAIAQCGGKKKKAAPSGGGGGGGGAKNEEKSGGGASQKSE KKDEEAKPSEAKPSDPNGPKAPTDKNAVAGTHDPNYQTLAGVDGNVFQEKGGAAPAAG GAAAPAPGAPKAGGPGMAATHDPNYQTLAGIGNDCFDKKDGAKPAAGGAAPPAPKAGG PGMAATHDPNYQTLAGIGNDCFQKK" gene <1325586..>1325651 /locus_tag="CAEBREN_11216" /db_xref="WormBase:WBGene00149941" mRNA <1325586..>1325651 /locus_tag="CAEBREN_11216" /product="hypothetical protein" /db_xref="WormBase:CBN11216" /db_xref="WormBase:WBGene00149941" CDS 1325586..1325651 /locus_tag="CAEBREN_11216" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54154.1" /db_xref="WormBase:CBN11216" /db_xref="WormBase:WBGene00149941" /translation="MQFSPPYFSCLYSDFDLASRF" assembly_gap 1330658..1330667 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1337486..>1342213 /locus_tag="CAEBREN_31184" /db_xref="WormBase:WBGene00193149" mRNA join(<1337486..1337623,1337975..1338154,1338198..1338404, 1340341..1340413,1340715..1341110,1341702..1341941, 1341994..1342068,1342119..>1342213) /locus_tag="CAEBREN_31184" /product="hypothetical protein" /db_xref="WormBase:CBN31184" /db_xref="WormBase:WBGene00193149" CDS join(1337486..1337623,1337975..1338154,1338198..1338404, 1340341..1340413,1340715..1341110,1341702..1341941, 1341994..1342068,1342119..1342213) /locus_tag="CAEBREN_31184" /note="contains similarity to Pfam domain PF01388; contains similarity to Interpro domain IPR001606 (ARID/BRIGHT DNA-binding domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54289.1" /db_xref="InterPro:IPR001606" /db_xref="PFAM:PF01388" /db_xref="WormBase:CBN31184" /db_xref="WormBase:WBGene00193149" /translation="MSVRIDEPQLFVSMSKESAQETVNVGANDETSSNCDERHNDDQG DEQKSPPASPDLAANLNVFDLESRQKVVQRILNSQLNSLSGLRTPLNLPPIFQALQGP FSIQQQLLGLASGLTAMSPGLDDYDEENTNGGEPEDLTLGGFRKDTSEKSEEPSESGI NASGPAWSYEEQFKQLYELSDDVKRKEWLDDWLNFMHRIGKPVTRIPIMAKQVLDLYE LYRLVVQHGGLVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKYLYDYECEKEKL SNQSDLQQAIDGNRREAPGRRTAPSFPLPFPLPHAANAAAASMLNKQLNGLGMRNDLL DDENTLNLQASGLFGAGYGAEQMAILEAHQRNLERAQRQAEQVARQSLGLAICSNGNG GARHGSRRESTSSNDSDIPMKRPKLEIENKSNGSNSLRISTKHSEDSKSSMSVSMEIN GITYQGVLFALDEAATE" gene complement(<1342778..>1345807) /locus_tag="CAEBREN_25836" /db_xref="WormBase:WBGene00164561" mRNA complement(join(<1342778..1342813,1342860..1342988, 1343037..1343228,1343272..1343974,1344019..1345104, 1345152..1345526,1345574..1345641,1345688..>1345807)) /locus_tag="CAEBREN_25836" /product="hypothetical protein" /db_xref="WormBase:CBN25836" /db_xref="WormBase:WBGene00164561" CDS complement(join(1342778..1342813,1342860..1342988, 1343037..1343228,1343272..1343974,1344019..1345104, 1345152..1345526,1345574..1345641,1345688..1345807)) /locus_tag="CAEBREN_25836" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR014811 (Domain of unknown function DUF1785), IPR003165 (Stem cell self-renewal protein Piwi), IPR003100 (Argonaute/Dicer protein, PAZ)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54231.1" /db_xref="InterPro:IPR003100" /db_xref="InterPro:IPR003165" /db_xref="InterPro:IPR014811" /db_xref="WormBase:CBN25836" /db_xref="WormBase:WBGene00164561" /translation="MEDQWLLSAIYDDGLVDRIRERRAASSRQTSIHVPSVENEILST SSESRVYDDLYLHIVEEPKESFQLARKPRPSGFGRYIPLLANQFRITCTGARVYRYKI RIDPFIPSKKLNRKIIFSLKEQVLELRELNVVYDGVDTIYATDSIDIEKIGQLFVNVK GVLNTKESPNRFSVNLTYVDNFLLDTRIPPGNLDPHEKLRMMHAIDTIFRQTSSKTFH TVLQSFFSITPHLNQRTSRGFGWGTVNLGLGREVCYGFYQNVVETFDMMTMNLDVATT TFYRPIALVEFLAEVLEVPLATVTDGRALSDAQKKKFNREVAGLKIETRHCLSPRRFR VARCTWKPMESLKLNIVEDSEEAVSISMVSYFKTRYNIDLKYLHLPCIEVGRSRECIL PLELCFIVSGQRCIKKLNEQQIANLIRATSRNATERKNAVLSLHDRIKLNDDPHASKF GLCVEDQLMRIDGRVLPAPRLLYCYPNSKQQNCVTTPNNGTWDMRGKNFYLGVEIRKW AVVCFAEPAIVPSHNIQSFIGNLCKVAREIGMPFVDDYCFCRYAQSDQAYSLLDYLLK EFVDLQLVICIVPGKSTVYGDLKRKGDLLGLTTQCVRTHNVSKNSPHTLSNLCMKINS KLGGTNVVISSPPPSVTSEPVLFVGCHLSRTSVSTPSDAASSVSHNETSIACIVGSVD GHPTRFAPVFRIQPRQMNTIVEMRDMMKEAILNFSRSTGYKPHKIVIYRAGIGEGTVD EILQTELRAVREACSMIDYNFQPGFTFIGLDVTHHTRLFASNEIDQIGNSRNVPAGTL VETGITVNNLFEFYLVSHAGIQGTSRPTKYVVMWDDNRMPPDEIHEMTYQLCHTQSRC TRSVSIPSPVYYAKLVAQRAKILMADEKFDVELFREKALTDGMLFA" gene <1347656..>1348559 /locus_tag="CAEBREN_24085" /db_xref="WormBase:WBGene00162810" mRNA join(<1347656..1347844,1347901..1348172,1348223..>1348559) /locus_tag="CAEBREN_24085" /product="hypothetical protein" /db_xref="WormBase:CBN24085" /db_xref="WormBase:WBGene00162810" CDS join(1347656..1347844,1347901..1348172,1348223..1348559) /locus_tag="CAEBREN_24085" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54379.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN24085" /db_xref="WormBase:WBGene00162810" /translation="MTVELFKEILTEPALKDFALLYLDKGEIDEECLNMAMETATARR KRDLYIIGTKVPENYYHENAFKFNDVVYCYSKWVRIEHLFTLKNTFGCTLERHSLTGS DVNTFIKFWIHNDQDMVRALRLTMSATFQPAVLFDGVIVLEGRRRNLPFYLFVANPMK QRKYQIMGVVREKDEIHLYSSGKDQPIRCDNFVAEAFEPEYEVLLILNKRKELEDELE RIQNLLETNQDQNMVEKKNDISRELQSVSVELDNYKLVLRDGIYRYM" gene complement(<1348816..>1349261) /locus_tag="CAEBREN_05861" /db_xref="WormBase:WBGene00144586" mRNA complement(join(<1348816..1348962,1349007..>1349261)) /locus_tag="CAEBREN_05861" /product="hypothetical protein" /db_xref="WormBase:CBN05861" /db_xref="WormBase:WBGene00144586" CDS complement(join(1348816..1348962,1349007..1349261)) /locus_tag="CAEBREN_05861" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54443.1" /db_xref="WormBase:CBN05861" /db_xref="WormBase:WBGene00144586" /translation="MIKSANLRKQLTIKKKSWGGYGTRFLLFPFSYFSSRRRLEFLKR QLKSYSELDLFENEKTEKGAEIRNLKKKWHEHVMTLNALNKKLQQRVLQREAAMTKAN SVVHLTTHVRDERNREIEELQKEIAKTRLKL" gene <1350057..>1351101 /locus_tag="CAEBREN_30772" /db_xref="WormBase:WBGene00192737" mRNA join(<1350057..1350272,1350468..1350704,1350748..>1351101) /locus_tag="CAEBREN_30772" /product="hypothetical protein" /db_xref="WormBase:CBN30772" /db_xref="WormBase:WBGene00192737" CDS join(1350057..1350272,1350468..1350704,1350748..1351101) /locus_tag="CAEBREN_30772" /note="contains similarity to Pfam domain PF03057; contains similarity to Interpro domain IPR004296 (Protein of unknown function DUF236)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54272.1" /db_xref="InterPro:IPR004296" /db_xref="PFAM:PF03057" /db_xref="WormBase:CBN30772" /db_xref="WormBase:WBGene00192737" /translation="MWSLTGLVCLTMTLFICKKSKKTSTASSPANQLPSPAESPQPPQ PPPPVKVSEPPKPADPPAPEEKGKEEEKKTEDKPKSKKSAKEKSKKDGSKKSKKSEKS KKSEGKKSKKDEGGAKKEEKKKDDVKGKDNFKKPEDENAVAAKKDPNYQTLCGLNNDL FGPDKNPKKQFKAPAKVEKADVKDPQYETLNGLGEDLFKEEKKEDEGKKKEFKPPEKV VKADAKDPQYETLNEVDKGIFNNEEKPNDTKEGEKKDEEKEKEKTKSEKK" gene <1354070..>1357510 /locus_tag="CAEBREN_10404" /db_xref="WormBase:WBGene00149129" mRNA join(<1354070..1354159,1354451..1354710,1355058..1355481, 1355529..1355609,1355659..1356438,1356486..1356836, 1356882..1357386,1357437..>1357510) /locus_tag="CAEBREN_10404" /product="hypothetical protein" /db_xref="WormBase:CBN10404" /db_xref="WormBase:WBGene00149129" CDS join(1354070..1354159,1354451..1354710,1355058..1355481, 1355529..1355609,1355659..1356438,1356486..1356836, 1356882..1357386,1357437..1357510) /locus_tag="CAEBREN_10404" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54120.1" /db_xref="WormBase:CBN10404" /db_xref="WormBase:WBGene00149129" /translation="MHPSAAPQMGPAGPYHHPMPPQQVPYHAEQVPTTSHPSWHHPAY PGLPTPPYQQYPPQQPQQHANYPPMTPHHPHPTPQQQQQQPPPQPPPQQHSQMTPQAL TQQQQQQIQQQQQQRSAYSSPSHSIGPTAPPAQNQKLRTEQWAMGQSWPYAQSPAPSV APSVMSYHQNDDRMSMLSVNTNMTNQYPETQRCFSSNGSTCENVNPEMTPTNWANAAE QAMKEWFNQHDPHRRFQLAMTIREWVRRDRFMRVDSSVMPGVVQHLLNIVHDGMIIRP QVQLPQSYYTQLYCYLLDILLRITYYRTTVPYMNLVVQLFVPKENGPQDFRELICQML RYDLPADSHAPHCSRQAFLIFENIIQHLNNPKNEAMRLDFSRALKFEAIFNTLRSYFV PSLPPTAVQPIVLMILRFLASKDPAVKNYLIWPQDPKREQLSNGSLIIGLLGVLGRSH QALITLAAQEGEREKKEPVLKQLTQVITRAFDLLNLLMHDSNSIDQFVNANGVAWICK ISPHHNIDVARSGFKLLLHVSDAKALSLINLKDILPNIIVKVRECLRNNELKKNEEDD VVYCGTGFLSNAIAHKQPVKEMAIEYGTIGLLYEVIMKYTPLNELRETLRRNLVCGII SNSLRTLNNFLMMWIPTQNEPAVNASENVMQQIRNFTQDVLKRLVTCLSIEGVDTPPM LELRSTILRFFLLVLRTPFVPDSILLSVTDDIRKKNVVDHICIAFSWAMGQTANERTQ DTKLQLVERVFNLLVRLIHQCGAAREVALSFYGVHCPLSLLSNNQQKPSFVLNVLIVC DQVLMHNPSVANVWSVDRPMLEMLKNHLNPDIVKAASSLLSKLPDIDPLAVILSNS" gene complement(<1361068..>1362564) /locus_tag="CAEBREN_24486" /db_xref="WormBase:WBGene00163211" mRNA complement(join(<1361068..1361245,1361681..1362280, 1362365..>1362564)) /locus_tag="CAEBREN_24486" /product="hypothetical protein" /db_xref="WormBase:CBN24486" /db_xref="WormBase:WBGene00163211" CDS complement(join(1361068..1361245,1361681..1362280, 1362365..1362564)) /locus_tag="CAEBREN_24486" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54297.1" /db_xref="WormBase:CBN24486" /db_xref="WormBase:WBGene00163211" /translation="MRNIMKHLRMSIECIRYSINGVKVQVLIEDAEYDAKFVMATFKC LPFHQNLQDIQQVRIADNTTQCRIDRTSVGDDEGLMLIHPGTTPENLVSSLQTHIEPF FQPDFDSLLEILMDEDLGPLPEVQNIKGTWIDGLEVETTFLENLYEKYPNQECSLIRP EIYGELSVNSKIFQIDHLLIKQPGNHARMILENFTGTCLYFDDALIDENDLKVFMRKW ISNTAYHNLQVLSVNPLEYWSNEQSILEGIPKKEWDETTRPTRYEYQSKVLDWVGPAD PIYLRNAIRNAWELVRDTDGKVASVYTLPGSFVFCVWSEEQLNMTRMEQ" gene <1363968..>1366858 /locus_tag="CAEBREN_21273" /db_xref="WormBase:WBGene00159998" mRNA join(<1363968..1364068,1364118..1364351,1364400..1365288, 1365336..1366453,1366501..>1366858) /locus_tag="CAEBREN_21273" /product="hypothetical protein" /db_xref="WormBase:CBN21273" /db_xref="WormBase:WBGene00159998" CDS join(1363968..1364068,1364118..1364351,1364400..1365288, 1365336..1366453,1366501..1366858) /locus_tag="CAEBREN_21273" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR008905 (Eukaryotic translation initiation factor 3 subunit 8, N-terminal), IPR011991 (Winged helix-turn-helix transcription repressor DNA-binding), IPR000717 (Proteasome component (PCI) domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54247.1" /db_xref="InterPro:IPR000717" /db_xref="InterPro:IPR008905" /db_xref="InterPro:IPR011991" /db_xref="WormBase:CBN21273" /db_xref="WormBase:WBGene00159998" /translation="MSRFFRAKGDSDSETESSEDEVEDQKVNKSAKFRDDLDFMAGPE DDVKRVVRAQKDKKFDELKSIIKQNRDAKSNKDLNRLLNGFDSLAKAFKSSKNVFQQQ NVTIPRFYIRSLVEVEDYVNNLWEDKEAKAALSKNNAKALPVIRQRLKKYVKDEDLGK LIADYRASPDEDGYETPEDEDDDDFEEIPEAKTEKSPGKQADKAADSDSDSDSDDGDS SNWSSEPDTNSSDDEDSVTKMEQLRRYFLKKEFREDSKDDKKGDKRKRVIKVKEVVED DDDDSWTPVSREKSVVHFDPKEEVTHDVMIKKLNEVMSARGKRTTDRNQHVANLQKLL EVSEEKNLGLGINVKISFCIISALFELNAKISDFMEYETFMKTLQTVNRLLDLLIETD KVKLSVTYAEEDENLKDDTQEYRIQGSILIAVQRLDGELAKILQNADCHSNDYIEKLK AEKDMCQLIEKAEGYVELRGHLKIFDEHEVCKVYMMRIEHTYYKYQDQNEKEVGKTMD YLCNKIYSLDKEKRLRQRAMLCHVYWLAVHDQWHRARDLLLMSHMQAIVDHSDVDTQI LYNRTICQLGLCAFRHGFIREAHQGLSEIQNTQRAKELLAQAVGTRQHEKTAEQEKID RSRQVPYHMHINVELMECVYLICSMLLEIPHMASCEFEMRRRMLSRSFHYQLKQSEKA SLTGPPENTREHVVAASKAMLNGDWKKCKDYIVNDKMNQKVWNLFHNAETVKGMVVRR IQEESLRTYLLTFSTVYTTVNLKKLADLFELSKKDVHSIISKMIIQEELSATLDEPTD CLIMHRVEPSRLQMLALNLSDKLQTLAENNEQILEPRTGRGGYQGPGSWFPGRNERQG DKQKGSGGFQGERRGGQGQDGKRGNWGSQGGQQRRHPQKQRAF" gene <1367322..>1368762 /locus_tag="CAEBREN_04236" /db_xref="WormBase:WBGene00142961" mRNA join(<1367322..1367504,1367557..1367997,1368046..1368162, 1368212..1368670,1368718..>1368762) /locus_tag="CAEBREN_04236" /product="hypothetical protein" /db_xref="WormBase:CBN04236" /db_xref="WormBase:WBGene00142961" CDS join(1367322..1367504,1367557..1367997,1368046..1368162, 1368212..1368670,1368718..1368762) /locus_tag="CAEBREN_04236" /note="contains similarity to Pfam domain PF04180; contains similarity to Interpro domain IPR007307 (Low temperature viability protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54383.1" /db_xref="InterPro:IPR007307" /db_xref="PFAM:PF04180" /db_xref="WormBase:CBN04236" /db_xref="WormBase:WBGene00142961" /translation="MGKKKAFIDKKASQSFRLVPDNREKTERFKPTQEHLEEQQKYGV YYDDDYDYLQHMRAINEPMKLENVQEEVEKTTIKASGPSGFPPAPPMFGLVGALKKPE FFDEDVANALEDVNDERNGGELEDNFISLAGGVLDERITCFRDNRRGGDSDEEEDDDE DNQMYDDYDDEELFGEDAVGEIRVERAEQRVIDDAFEELMDREYNTDQIGELDGDDYD VGGALEPNAGRLHKLINDKGPSNAEYDEELAKHYVRERMRLIEEGVIKDKEEYEIVEV DEGTNKKMKWDCESFATQYTNIYNHPTLIKEPRGLSKKALKRFDKAVEEMEIAEENED EEEEDDDEDMEDDDQESVLSTVSTFRPKGETPEQRNLRKKAVKEARKQRRIEKKANKT MFAEEKRKLAKGRIGQIKARPI" gene <1369338..>1372845 /gene="Cbn-tsp-7" /locus_tag="CAEBREN_13494" /db_xref="WormBase:WBGene00152219" mRNA join(<1369338..1369400,1369451..1369533,1369581..1369713, 1370692..1370709,1371004..1371081,1371134..1371196, 1372438..1372582,1372712..>1372845) /gene="Cbn-tsp-7" /locus_tag="CAEBREN_13494" /product="CBN-TSP-7 protein" /db_xref="WormBase:WBGene00152219" CDS join(1369338..1369400,1369451..1369533,1369581..1369713, 1370692..1370709,1371004..1371081,1371134..1371196, 1372438..1372582,1372712..1372845) /gene="Cbn-tsp-7" /locus_tag="CAEBREN_13494" /note="contains similarity to Pfam domain PF00335; contains similarity to Interpro domains IPR018499 (Tetraspanin), IPR000301 (Tetraspanin, subgroup)" /codon_start=1 /product="CBN-TSP-7 protein" /protein_id="EGT54447.1" /db_xref="InterPro:IPR000301" /db_xref="InterPro:IPR018499" /db_xref="PFAM:PF00335" /db_xref="WormBase:CBN13494" /db_xref="WormBase:WBGene00152219" /translation="MVEGGVTIVKYLLFLANLVLWVGGLSLIIVGSILQLKFDNVLDI LGDERLATPIILLVIGSLCTLLGFLGCCGAIRENYCLTVSFAVLLALLITPKFVLTCE IAAVIIGYALHDSFRLGISNQLQTGMIRYHESRGVESAWDKTHQLFECCGVTNSSDWL TFTTIPDSCCIEEMEGCARESAPLFEPGCIHSVEQWVLKNGAMVGGICAVLAAIQLVG VCFACCLSKSILKDFHDFYY" gene complement(<1373710..>1375888) /locus_tag="CAEBREN_12860" /db_xref="WormBase:WBGene00151585" mRNA complement(join(<1373710..1373857,1373905..1374123, 1374268..1374388,1374509..1374750,1374797..1374935, 1374985..1375349,1375407..>1375888)) /locus_tag="CAEBREN_12860" /product="hypothetical protein" /db_xref="WormBase:CBN12860" /db_xref="WormBase:WBGene00151585" CDS complement(join(1373710..1373857,1373905..1374123, 1374268..1374388,1374509..1374750,1374797..1374935, 1374985..1375349,1375407..1375888)) /locus_tag="CAEBREN_12860" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000539 (Frizzled protein), IPR020067 (Frizzled domain), IPR015526 (Frizzled related)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54306.1" /db_xref="InterPro:IPR000539" /db_xref="InterPro:IPR015526" /db_xref="InterPro:IPR020067" /db_xref="WormBase:CBN12860" /db_xref="WormBase:WBGene00151585" /translation="MYRKLLLLTFALLFGCSSADQRLSSTSISSMNGFSAKRGCEQIT IPMCKNLDYNQTVFPNLLGHTTQDEANPAISQFNPLIKVKCSEDIRLFLCTVYAPVCT VLDKPIQPCRELCLSAKNGCESLMKKFGFQWPEQLDCNKFPVTDLCVGKNSSDSSSSK KSSSDVTFGVSTIANEVVLSPKKCPHVMRTTTGSHFSLPLLSGRLPECSLTCEADNQV PMMFDARIRRYLRICTAAWAVACFVCSLFTMVTFLVDLSRFAYPVRPILYLAFCYLAV SLVYMIGVVGEDGFACGAYGSTPTILVTQGGENVGCSALAVVHYFFFMSSCAWWLVLC LAWFLAANLKWGAESIAALSPYFHALCWGFPAVLSVIVLVTNSIDGDVFTGICSVGNL NPSALVYFFFAPIVVSLVLGGVLLACGIWSMCRIRNYIKLQHADVERNISKLEKLMFR IGAFAVLYAVPNAMNAAIMWYQAVNMPAWLEGWLHFRCMRHQDRDVFGFTYPTDECPL DPKVASPEIIVFHLKYISQLVVGITCAIWVISSKTVSSYQKAYLALTSRTPPVPAHVD QVNMR" assembly_gap 1378146..1378155 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1378956..>1381186 /locus_tag="CAEBREN_02431" /db_xref="WormBase:WBGene00141156" mRNA join(<1378956..1379014,1379063..1379673,1379723..1379783, 1380149..1380583,1380632..1380724,1380805..>1381186) /locus_tag="CAEBREN_02431" /product="hypothetical protein" /db_xref="WormBase:CBN02431" /db_xref="WormBase:WBGene00141156" CDS join(1378956..1379014,1379063..1379673,1379723..1379783, 1380149..1380583,1380632..1380724,1380805..1381186) /locus_tag="CAEBREN_02431" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54166.1" /db_xref="WormBase:CBN02431" /db_xref="WormBase:WBGene00141156" /translation="MASTRNIDDVIDQIDVEEQQRLLLRTEQERKDREYAERLFREQL ETPPRPTQSSSNNRGRRGAGRATNRGRAVSRRENLAVIGARSNARPSSSSSSSRTPFV RNSRGELEPARRNLPVMAARRYIPTPSPPPSNGGGPIRRNARGGNATTTTRGGNRATT STRGGNRATTSTRGGNRATTSTRGGNRATTSTSGGNRATTSSRGRARGGRRVSRATRR RNASNGLQFNGDRLQARRGGEVIDITDNAYFPDSDDDSDYDDFDGEDREDMSSTDSDS ELEPEVAADLFQVWYGDLMRDNARADPNFQIVRFGPLGNSSDSDVIGEDESDVSDGSE DEFGAIRAERNNIHQEIREEDREMYNRELVLYHDDAEYDVPPPNIPTYKGKPMEPDTT WGDCTICSEPPIKPQGCQKCLQFLGCADCIRRWYQSRQDSVDRPTCPLCRAPWGNRGP AVALMPTIIRHREKRDKQSASEPSTSGPSTSAGPSTSAVLSTSAGSCTSASPPTSTTS SRERPSTSGSSSTRPSTSTAVPSTSRRGRPSASSHRRN" gene complement(<1383565..>1390456) /locus_tag="CAEBREN_23649" /db_xref="WormBase:WBGene00162374" mRNA complement(join(<1383565..1383747,1383796..1383873, 1383922..1384695,1384744..1385227,1385281..1385957, 1386330..1386369,1390350..>1390456)) /locus_tag="CAEBREN_23649" /product="hypothetical protein" /db_xref="WormBase:CBN23649" /db_xref="WormBase:WBGene00162374" CDS complement(join(1383565..1383747,1383796..1383873, 1383922..1384695,1384744..1385227,1385281..1385957, 1386330..1386369,1390350..1390456)) /locus_tag="CAEBREN_23649" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR008428 (Chondroitin N-acetylgalactosaminyltransferase), IPR003378 (Fringe-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54396.1" /db_xref="InterPro:IPR003378" /db_xref="InterPro:IPR008428" /db_xref="WormBase:CBN23649" /db_xref="WormBase:WBGene00162374" /translation="MYKMESSSLLEVVASSADPNRDAYLCRLLFDLYSMQHSCSTTNH LVIERRGGCRMPLSRAACTILLGILFGFSATYYLTALKALTDPIICSPQQQLAGAEEL DIINLRADADVFTRSQNLPGHRRGLILVAIMTAAKYVDTRAYNVWKTWAQHIPGRVLI FVAEGTESIHEDMPLIRLKGVDDTYPPQKKSFAMVKWLAENMADEYDWFLRADDDLYI RGEELAAFLRSVDSSKAHVIGQAGLGNSAEYGLLALGSTDNYCMGGPGIVMSRDTLLK VSPHLESCLQHMLTSHEDVELGRCIRKHVGVACTWNYEMQKLFHNNQSAIKESYAKNM KELKDAITLHPIKDPAVMRKVHLRNREIKLREARAKRSLLSSELSTAKAQTLVRMTPN RTIDLTPWDYINNNKILFCTDRVNCPRHTVDLSIRTEMADTITQLFDEFNTNARQRGR VLQFQSLQYGYMRVEPTKGVDYVLDMLLWFKKFRPPNRTTISVRRHAYVQQIFGKLRS LAEGVFRSNMRANSTLIEDPTLHMIMPLRGRAPIFARFAQHLKSICARGGDDLAVSLT IVLYSSEDEFENRETIEMLRASSIPVSVIDMGDVPFSRGIALMRGAETLPANALLFFT DVDMLFTCDALKRIKSNTILNAQIYFPIVFSEFSHESWSENDKLLADAFHYGRGRGYF RHFGYGLAAMYKADLMDIGGFDTKIEGWGKEDVDLFEKAIKNGRLRVIRAPEPGLVHI YHPIHCDENMPTAQKDMCHGSKAASLASIDTLVDQIAQYT" assembly_gap 1395552..1395827 /estimated_length=276 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1396358..>1398264 /locus_tag="CAEBREN_26075" /db_xref="WormBase:WBGene00164800" mRNA join(<1396358..1396555,1396614..1396739,1397121..1397236, 1397283..1397410,1397460..1397626,1397675..1398028, 1398103..>1398264) /locus_tag="CAEBREN_26075" /product="hypothetical protein" /db_xref="WormBase:CBN26075" /db_xref="WormBase:WBGene00164800" CDS join(1396358..1396555,1396614..1396739,1397121..1397236, 1397283..1397410,1397460..1397626,1397675..1398028, 1398103..1398264) /locus_tag="CAEBREN_26075" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002290 (Serine/threonine-protein kinase domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR001245 (Serine-threonine/tyrosine-protein kinase), IPR017442 (Serine/threonine-protein kinase-like domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54191.1" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="WormBase:CBN26075" /db_xref="WormBase:WBGene00164800" /translation="MAVSTSIESHKLSKKVEVLARACADFGKLSEKLKMSTTLDDFDI LYNMGKYQLVVDGQKTLDEAIKHNGRKLVVEFVLQKSEEDASYPFKSQKVGRIADEEP LIQTLTVGRMSSAGSLAGKSYGLQSQTSRYSEKVRNIPGRYNLGRKIGEGSLGSVYIA ESKKGGTYAVKIVSKHGRHLPQEADVDYLKMLRHERIVEYMYIIEPSGSNDIHILMEY MHSGSLKEYIDRNGPLHHELTKAYTKQILEGLDFLHSKNIIHQDLKPANLLLKNTHRE RLIKIADFGSSRFATLKKTRAGQQGRTPKYTDPGVSLGREIAGKRSDIWSLGVIVIEM YTKVYPWDIEGQHPITIPRILDECPPQISITDKVDEDLVKMAKLMLLPVIQRPYAQAL LLLPVLQESSQEDDQESDSDDDFF" gene <1398471..>1399468 /locus_tag="CAEBREN_14641" /db_xref="WormBase:WBGene00153366" mRNA join(<1398471..1398583,1398849..1398911,1398956..1399314, 1399371..>1399468) /locus_tag="CAEBREN_14641" /product="hypothetical protein" /db_xref="WormBase:CBN14641" /db_xref="WormBase:WBGene00153366" CDS join(1398471..1398583,1398849..1398911,1398956..1399314, 1399371..1399468) /locus_tag="CAEBREN_14641" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54441.1" /db_xref="WormBase:CBN14641" /db_xref="WormBase:WBGene00153366" /translation="MDMLNTLRDTLSSVQAELSTGVEKLRMNVTSNMVAQQKVSTESV NEILNTSAGNELLQNFQNLLIELEENGAEGGRLANLCSTRMGRCQQMCKEKADAVMEI DEFLRNSAEFDKKIREITGQITKLTRFCNQTEQAMTYLEALCEVSHTEGEVDLIRQQA RSAATIVQIECDSPSVLASALRSRPEDAAKAQQEEVMLEEFLSSKNMTMP" gene complement(<1400160..>1400192) /locus_tag="CAEBREN_22250" /db_xref="WormBase:WBGene00160975" mRNA complement(<1400160..>1400192) /locus_tag="CAEBREN_22250" /product="hypothetical protein" /db_xref="WormBase:CBN22250" /db_xref="WormBase:WBGene00160975" CDS complement(1400160..1400192) /locus_tag="CAEBREN_22250" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54178.1" /db_xref="WormBase:CBN22250" /db_xref="WormBase:WBGene00160975" /translation="MSSALDFNQF" gene <1400402..>1402089 /locus_tag="CAEBREN_24261" /db_xref="WormBase:WBGene00162986" mRNA join(<1400402..1400498,1400647..1400773,1400916..1401090, 1401136..1401912,1401976..>1402089) /locus_tag="CAEBREN_24261" /product="hypothetical protein" /db_xref="WormBase:CBN24261" /db_xref="WormBase:WBGene00162986" CDS join(1400402..1400498,1400647..1400773,1400916..1401090, 1401136..1401912,1401976..1402089) /locus_tag="CAEBREN_24261" /note="contains similarity to Pfam domain PF10186; contains similarity to Interpro domain IPR018791 (Protein of unknown function DUF2355, coiled-coil)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54451.1" /db_xref="InterPro:IPR018791" /db_xref="PFAM:PF10186" /db_xref="WormBase:CBN24261" /db_xref="WormBase:WBGene00162986" /translation="MDSLRAVESKSSPVVLHRIRRHSHTVTGVPIPGIAADGIGSPTD HAHTPPGVLTKIDTIQTKKSSIAGVVSAQFSSVHQRRMVCKNCSKKINCLCKKCTLEK LKLYSRRENIQQRFEENQRLLTEIVRIMEPTDTLKEEITMKEDRIMKLKVAVENAKMR IAMKQNEINKLDAVPKQKASQFEAVFASQEKFLKKSAVKKVEHAARLATLEEEVAKIR LQMCVHACRIFPVQVFDVNVESVTAKSKNSKNWAVVNDSELQKGLRIAIRNSYINDKL RAKLANQLSNGTISLPLDLHPPFAAFTNTLQLVHLLSVIFNFRPPETLSHHDLCIRER WTKESLNRDWSTLCDAVIYLCVFIGMPPAKLKYMDPHHNLIALASFVVNDVKNIIKIG SRPMCDLSEVHALIEAQKPEDFSKKEELDESWTFVDY" gene complement(<1402308..>1402995) /locus_tag="CAEBREN_00489" /db_xref="WormBase:WBGene00139214" mRNA complement(join(<1402308..1402688,1402736..1402913, 1402955..>1402995)) /locus_tag="CAEBREN_00489" /product="hypothetical protein" /db_xref="WormBase:CBN00489" /db_xref="WormBase:WBGene00139214" CDS complement(join(1402308..1402688,1402736..1402913, 1402955..1402995)) /locus_tag="CAEBREN_00489" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54195.1" /db_xref="WormBase:CBN00489" /db_xref="WormBase:WBGene00139214" /translation="MGKSKSGEGNKWLKDRADFDEEILSLADDASIIFENTGDLLKSM KNFSGSVGEQEKKHPYGKGSYAAKTYGGGMKNSASAFTRSGDQFDKLYGACSGLQEHI NGKILAKLISFKDIECKDCDQQMTQLKKAQKDYANKKGKKNPDQVLVDAAETSLKKLL EEAKGTLTKFNKTGCELLTQISADMKSGFDTYCDAGTSA" gene complement(<1403227..>1404103) /locus_tag="CAEBREN_19670" /db_xref="WormBase:WBGene00158395" mRNA complement(join(<1403227..1403443,1403492..1403637, 1403685..1403987,1404035..>1404103)) /locus_tag="CAEBREN_19670" /product="hypothetical protein" /db_xref="WormBase:CBN19670" /db_xref="WormBase:WBGene00158395" CDS complement(join(1403227..1403443,1403492..1403637, 1403685..1403987,1404035..1404103)) /locus_tag="CAEBREN_19670" /note="contains similarity to Pfam domain PF01852; contains similarity to Interpro domain IPR002913 (Lipid-binding START)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54335.1" /db_xref="InterPro:IPR002913" /db_xref="PFAM:PF01852" /db_xref="WormBase:CBN19670" /db_xref="WormBase:WBGene00158395" /translation="MSSEEASLTLYDVTDTLEKDDEKYAKALQIAGEVFGEVEALFND ENYESRQGWFKDESNDDGDIVFAKDTRQGRMVTISTELPMPPDFVMKETWEGMETLPE WNQNINFASVIASPTPNFDIVTYGNNDVLVVSGREFVSARIWRKLDDGSYLLASRSVS IPSFKSKHKGKVRAHLHLAGARFRPNPANPETTLTDVVMLADLKGFLPKMLVNQVIGR VMLMDTVTNRRHFHDLKAKRDENEDS" gene complement(<1404576..>1406574) /locus_tag="CAEBREN_20808" /db_xref="WormBase:WBGene00159533" mRNA complement(join(<1404576..1404590,1404807..1404928, 1404983..1405114,1405163..1405298,1405346..1405461, 1405835..1406007,1406384..1406490,1406536..>1406574)) /locus_tag="CAEBREN_20808" /product="hypothetical protein" /db_xref="WormBase:CBN20808" /db_xref="WormBase:WBGene00159533" CDS complement(join(1404576..1404590,1404807..1404928, 1404983..1405114,1405163..1405298,1405346..1405461, 1405835..1406007,1406384..1406490,1406536..1406574)) /locus_tag="CAEBREN_20808" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54110.1" /db_xref="WormBase:CBN20808" /db_xref="WormBase:WBGene00159533" /translation="MIKTILVLASTFFVIHATNYCLRETELNDDQFFDEVHGYFNGRK PQRTVSWFVARFLTPVPSLTKGFLSMSKLAKPIFKTKRTADTAIWPVDVGTMDVLTPN AVEFATLFTSGHFPINHDFTGNFTFLGVATGGLMSFLNEHFKNIKITGIDIDPQSEYL AKKWFGYHDRDNSKILIGDGAEFIIKMAERGETSNAVLIDACHNIEPADGIFCPVEAA RTPQFLDSLSKVIGLKGMTTFNVYNHHAKSDSYKRVLSDFSKHFVECKLIENYIGNVR NLM" gene complement(<1408517..>1408932) /locus_tag="CAEBREN_08966" /db_xref="WormBase:WBGene00147691" mRNA complement(join(<1408517..1408843,1408888..>1408932)) /locus_tag="CAEBREN_08966" /product="hypothetical protein" /db_xref="WormBase:CBN08966" /db_xref="WormBase:WBGene00147691" CDS complement(join(1408517..1408843,1408888..1408932)) /locus_tag="CAEBREN_08966" /note="contains similarity to Pfam domain PF00635; contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54418.1" /db_xref="InterPro:IPR000535" /db_xref="InterPro:IPR008962" /db_xref="PFAM:PF00635" /db_xref="WormBase:CBN08966" /db_xref="WormBase:WBGene00147691" /translation="MAEKKQYISTEPADKVKFKADPQEEQKTYLKITNKSEMKQAFKV KCTRNDLFRIKPATGVLDYNQTLTIMLIYRGGQEKLPSEERHHFGVYHIPAPEGCSCE GAWAEHYGPPQGEVKLRVIWE" assembly_gap 1413280..1421085 /estimated_length=7806 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1433777..>1439293 /locus_tag="CAEBREN_18838" /db_xref="WormBase:WBGene00157563" mRNA join(<1433777..1433957,1436037..1436227,1436513..1436746, 1437438..1437554,1437745..1437847,1438247..1438366, 1438529..1438823,1438876..>1439293) /locus_tag="CAEBREN_18838" /product="hypothetical protein" /db_xref="WormBase:CBN18838" /db_xref="WormBase:WBGene00157563" CDS join(1433777..1433957,1436037..1436227,1436513..1436746, 1437438..1437554,1437745..1437847,1438247..1438366, 1438529..1438823,1438876..1439293) /locus_tag="CAEBREN_18838" /note="contains similarity to Pfam domain PF01530; contains similarity to Interpro domain IPR002515 (Zinc finger, C2HC-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54397.1" /db_xref="InterPro:IPR002515" /db_xref="PFAM:PF01530" /db_xref="WormBase:CBN18838" /db_xref="WormBase:WBGene00157563" /translation="METVFDPSMMNLVSMLMESSNSLPTPPDTHTDGGSISPDSTASN CSENGGPPSKRRRKPENKDIVRVSEELEVQCSSSIPSSSSSSESSVHSDTETPNKENK EGEQMTCDTTTTCITTQKTTEQTVASADVVTSSTILPNGLDGVPSFLYSQFMTPSFQK QLEIFTSGHNLVGAAHSDTSPSDVDSLTSCDGVVAAASTLSKSMMTMTPSEALPKSPI SASSPPHSGSETEESRVMSPITQSNDELSISTTPNMTFTPNGSIPSPGTGYSWSIRRE GKLACPTPGCDGSGHQTGLYTHHRSLSGCPRRPDKTVIQMLALRQDTVLRCTTAGCSG KGHVNGNRTSHRSLSGCPIAHQEKLARRSLKATPQRTKSPLKGIGMSDECPLDLTLTG LPAGLSTQQLLAAAQAGLIPSGNMMDLLQQLAQSSQPLAKLDEESKKENEMDVDIETN TDDEIPVLVKEEAKCESPLSTVVAPIPSTPTRLVATAPEEKCSPATILQMPGLSDALL KMTTPAAAPAPVPFAQFPPQAALFGNQGIFAQFMLAQLQAQQGF" gene complement(<1440416..>1441718) /locus_tag="CAEBREN_06404" /db_xref="WormBase:WBGene00145129" mRNA complement(join(<1440416..1440517,1440561..1440659, 1440708..1440825,1440877..1441146,1441195..1441435, 1441523..>1441718)) /locus_tag="CAEBREN_06404" /product="hypothetical protein" /db_xref="WormBase:CBN06404" /db_xref="WormBase:WBGene00145129" CDS complement(join(1440416..1440517,1440561..1440659, 1440708..1440825,1440877..1441146,1441195..1441435, 1441523..1441718)) /locus_tag="CAEBREN_06404" /note="contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR013087 (Zinc finger, C2H2-type/integrase, DNA-binding), IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54359.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR015880" /db_xref="WormBase:CBN06404" /db_xref="WormBase:WBGene00145129" /translation="MSLLGDSQESYAGDGYGEPLPVSVHSMNRKLLKVNFQYGAYAQE EIAPFAVHQCNVCNKIFMSFKGLQQHSVIHTDSKPFICDVCGRGFRFKSNMFEHRTVH TGYTPHLCPFCGKQFRLKGNMKKHMRIHVTNKEELEAAYRPYSSNRRMAAMIPENALV IRGAPMPYLFPDKRKNAQRQLRLGSDPSKWVDRICDNQLIPTIPFNEKMLHASMRLNG AQTLAEVVDNAKPLEFEIFFCPLCKYECNGREECDIHIYTSHGKRPCEIAAEPYFCTK CMRKFMDENMFLQHRSYHSRVQLMMRNQEIDMSTPEVDLAQICYSMFSTGPNDLIVAK QSRSLLP" gene <1442703..>1445803 /locus_tag="CAEBREN_15549" /db_xref="WormBase:WBGene00154274" mRNA join(<1442703..1442771,1442956..1443122,1443179..1443277, 1443328..1443407,1443457..1443583,1443629..1444010, 1444317..1444654,1444764..1444872,1444922..1445037, 1445665..>1445803) /locus_tag="CAEBREN_15549" /product="hypothetical protein" /db_xref="WormBase:CBN15549" /db_xref="WormBase:WBGene00154274" CDS join(1442703..1442771,1442956..1443122,1443179..1443277, 1443328..1443407,1443457..1443583,1443629..1444010, 1444317..1444654,1444764..1444872,1444922..1445037, 1445665..1445803) /locus_tag="CAEBREN_15549" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine-protein kinase domain), IPR001245 (Serine-threonine/tyrosine-protein kinase), IPR017442 (Serine/threonine-protein kinase-like domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54240.1" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="WormBase:CBN15549" /db_xref="WormBase:WBGene00154274" /translation="MEVSSHSKPSSSSSSHSPSPASVASSQRRTRDSGLCSTSEIIEI PSYCIDNLNSHQLGKGTYGIVEKTKYRKSKKHDFKPAAIKYTSPLHLSTLIREAKIMW ALKDNPNIIEIYGIYRDPRHGTGVVMEYMDCGSMADLVYDRKSIDYTIDHAASWLLQL SSAVNTFHIAQQVHRDLKLQNMLLCNRYRTMKLCDFGTFTAMHQSMTSNRGTPITMAP EVFRCENYDTKSDIYSIGIIMWQIIARNHPYNRNLSVPGLLYNVAVANLRPPELEVNE ILSDFYKKCWHENPDERPTAADCVEYFEILKRQYPKGDVPLSDANINGPAATPPPRAY RPSPLGSASGSGLGTNGRTPTASNHLNPSAVNAHRRNRSETIQTKPGELPYPEGDGET SASGVFRVPRSQSEAKHLRDAVRAKSGQRQPHREAPAPPGGNRRDSNDEERNAVFMEL SRDERTSAVEPDYTDQKSLAIYHEHGSSNKELADALVLKKEVMRAKHEKLSRWPQHER HSELLERKNYLEREIAKYEWKSEDDDSIISERL" gene <1446240..>1447625 /locus_tag="CAEBREN_20784" /db_xref="WormBase:WBGene00159509" mRNA join(<1446240..1446383,1446599..1447253,1447306..>1447625) /locus_tag="CAEBREN_20784" /product="hypothetical protein" /db_xref="WormBase:CBN20784" /db_xref="WormBase:WBGene00159509" CDS join(1446240..1446383,1446599..1447253,1447306..1447625) /locus_tag="CAEBREN_20784" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54419.1" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="WormBase:CBN20784" /db_xref="WormBase:WBGene00159509" /translation="MGYGTQVASGVTVLCAAFLIPMLTCTVSLFYEVAQMHMSAMDGM DEFKLYANGAWEDMLPAARLPREASPTDPKKDPCDCTTTGPAINCPAGPHGPRGRPGR KGSDGPHGQQGRKGPDGMDVFKEMIGPVECIPCTAGEPGPPGEDGPAGERGADGEPGS PGKPGEDGEPGTDGEPGFIGFPGFPGPPGEDGKQGNNGTRGVGIPGPAGPPGPPGEVG MPGVTGEPGEEGQDGPEGPEGPPGNAGDRAEEGPDGIPGEQGVPGFDSGYCPCPRRSS SRVSPSGTQNATPLTDTFIPSPTIFPLTSSTASPTPISPSVPILLPTRSPKSREEPKS RESQESQPHQVPPNPSSSENPETGTSDNSQNFGGYRKV" assembly_gap 1450602..1453670 /estimated_length=3069 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1454656..>1459326 /locus_tag="CAEBREN_08222" /db_xref="WormBase:WBGene00146947" mRNA join(<1454656..1454673,1454848..1455004,1455567..1455658, 1456259..1456341,1456687..1456765,1457055..1457313, 1457361..1457469,1457515..1457701,1457745..1457860, 1458576..1458972,1459019..1459151,1459199..>1459326) /locus_tag="CAEBREN_08222" /product="hypothetical protein" /db_xref="WormBase:CBN08222" /db_xref="WormBase:WBGene00146947" CDS join(1454656..1454673,1454848..1455004,1455567..1455658, 1456259..1456341,1456687..1456765,1457055..1457313, 1457361..1457469,1457515..1457701,1457745..1457860, 1458576..1458972,1459019..1459151,1459199..1459326) /locus_tag="CAEBREN_08222" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54198.1" /db_xref="WormBase:CBN08222" /db_xref="WormBase:WBGene00146947" /translation="MSFQAMDTFAEISQHILMSATKPPDFDYVLEQVGDYGKYQLVFF FIICLPASLPSAFSAFNIPFVVGNPPHSCHIPAGKEYLRPLTNDTQILSCKQYNETQI NVFRAFTSAPVDTYSDRIDLVPCQNGWDYDNSTYLDSLVTEFNLVCDQQSWVEISTTS FYVGSFIGNCLFGYIADKFGRRRSFFVILIVLVVCGTANSFAKDIESFIILRFFTGLA FPALFQIPFIICMEFMGNSGRIFSGLMISLFFGAAMALLGVVAMFIRRWRQLTFFCNA PFVVLFCYYFFLPESPRWSVSVGKWSEAKAQLKKIARMNGKKEVDVDELVDSIKNHQN AREEEETKRSHNVTDLFKTPNLRKKTFIVTYIWVMNAIIYNGLTLNVSNLPVDDYWSF IINGAVELPGYFVVWPLLQCAGRRWTLAATMIVCGIGCVSAMFVPDGYPWLVASASFI GKFGVGSGFAVIYIFAGELYPTVVRAIGMGMSSMVAGSGLLLAPHIVNLGKIIKILPL LIMGLMALSAGILTFFLPETLGAPLPMTIEDAESFGKKPDPDSGMFTQAAKKRESQPL LEPHTTMDRRRRSSRLMNI" gene complement(<1460348..>1462935) /gene="Cbn-nas-5" /locus_tag="CAEBREN_02472" /db_xref="WormBase:WBGene00141197" mRNA complement(join(<1460348..1460692,1461320..1461468, 1461516..1461634,1461700..1461768,1461822..1461945, 1461995..1462104,1462802..>1462935)) /gene="Cbn-nas-5" /locus_tag="CAEBREN_02472" /product="CBN-NAS-5 protein" /db_xref="WormBase:WBGene00141197" CDS complement(join(1460348..1460692,1461320..1461468, 1461516..1461634,1461700..1461768,1461822..1461945, 1461995..1462104,1462802..1462935)) /gene="Cbn-nas-5" /locus_tag="CAEBREN_02472" /note="contains similarity to Pfam domain PF01400; contains similarity to Interpro domains IPR001506 (Peptidase M12A, astacin), IPR006026 (Peptidase, metallopeptidase)" /codon_start=1 /product="CBN-NAS-5 protein" /protein_id="EGT54369.1" /db_xref="InterPro:IPR001506" /db_xref="InterPro:IPR006026" /db_xref="PFAM:PF01400" /db_xref="WormBase:CBN02472" /db_xref="WormBase:WBGene00141197" /translation="MSKRGVQGRRINIYGAENGHSDIVQLRGTSAVGPQQVFSSPVRE RRPTLRNALLSNSPLKWSKMQDSDGNYLIPFVISGNYDALERKIIQSAMEKIAENTCI RLIPRTNQPDYAEILNKKGQGCYASIGRFPGKNVVMLESNDDQSCIQEDTVIHELFHV IGLWHEHMRADRDAFINVLYKNIEPAQYPQFEKLSSRDATTYNVPYDYKSVMHYDETA FAKPGKISMMTKDSKFQKVIGHPRDASSNDYKKVCAIYHCSKCMKQNFDQLVISDNID LRNPVVTNTPIQQGDSDCTDRLGICPMLKSREMLNCKVMATFCCSSCSAPTTTTTVST PSDSSLWSRIKSIFQ" gene complement(1465733..1465804) /locus_tag="CAEBREN_26549" /db_xref="WormBase:WBGene00187160" tRNA complement(1465733..1465804) /locus_tag="CAEBREN_26549" /product="tRNA-Glu" /db_xref="WormBase:CBN26549" /db_xref="WormBase:WBGene00187160" gene <1467881..>1471123 /locus_tag="CAEBREN_11344" /db_xref="WormBase:WBGene00150069" mRNA join(<1467881..1468037,1468780..1469036,1469099..1469254, 1469615..1469760,1469819..1469998,1470634..1470739, 1470790..1470888,1471055..>1471123) /locus_tag="CAEBREN_11344" /product="hypothetical protein" /db_xref="WormBase:CBN11344" /db_xref="WormBase:WBGene00150069" CDS join(1467881..1468037,1468780..1469036,1469099..1469254, 1469615..1469760,1469819..1469998,1470634..1470739, 1470790..1470888,1471055..1471123) /locus_tag="CAEBREN_11344" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54331.1" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR001723" /db_xref="InterPro:IPR008946" /db_xref="InterPro:IPR013088" /db_xref="WormBase:CBN11344" /db_xref="WormBase:WBGene00150069" /translation="MVEEICHICNDKATGKHYGAISCDGCKGFFRRSIRKRYHYQCRF EQNCDVTRNKRNACRACRLQKCIKAGMKSNGKPSSLFSTISLLQFPAIQNERDAIGKR KKTSVNGKQDLIEQLVEAENLCQQLRSSVIRNTSSLAPYDCGKVKWNYEDARAATLDD IGKSIHQQLVLFIEWAKSLPQFTFLAQLDKAALLKGGAASIIVLGVAYRSIILTVENT ICLANDTLLGKEHATQVGDINCVVGRIIDEIVNPMRRLNMDLYEYVALKAILFFNPVV RDCTDQDAVETARYAVLRSFQKRCVDKALENMEDDTFDCRSGKLLLLLPSLQAIAQQL VEDVQLARLFGLVNVDSLMEELILNDMKPSDPQILQTSLASPVNTSIKAEVEVED" gene complement(<1471383..>1476023) /locus_tag="CAEBREN_31232" /db_xref="WormBase:WBGene00193197" mRNA complement(join(<1471383..1471612,1471673..1471796, 1472380..1472556,1472602..1472808,1472857..1472953, 1473929..1474179,1474492..1474665,1474713..1474827, 1475944..>1476023)) /locus_tag="CAEBREN_31232" /product="hypothetical protein" /db_xref="WormBase:CBN31232" /db_xref="WormBase:WBGene00193197" CDS complement(join(1471383..1471612,1471673..1471796, 1472380..1472556,1472602..1472808,1472857..1472953, 1473929..1474179,1474492..1474665,1474713..1474827, 1475944..1476023)) /locus_tag="CAEBREN_31232" /note="contains similarity to Pfam domain PF00876; contains similarity to Interpro domain IPR000990 (Innexin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54261.1" /db_xref="InterPro:IPR000990" /db_xref="PFAM:PF00876" /db_xref="WormBase:CBN31232" /db_xref="WormBase:WBGene00193197" /translation="MDAQAIPHNSSSSNKGPGGSPASRVPRMVFAEIVGTLSFLQPQA DDDIFDRLHYYYTTTFLLLTAVLISLKMFGGRPIECWLPAEYKSSWEDYTEMYCWARN TYVTAFEDDNLPEVVNREYTMVSYYQWVPFFLVYVAFSFYAPCLIWRLFYDKSGIRLK DIMSFTNDKANVVPAQRQANIRGLAAHLSSVFKHRFRIGEKHPYHHKVFKIFNVRYYE SYLTYLYLAIKCLFLMNVLTQMYFMSRFLELDSHRYYGYGIFYDLIMGRGWKESSNFP VVTYCDMQIRILGHVQRHTVQCVLVINIFTEKIFFILWLWYTVLSLISFGSILSWIFA SIPFNQRRQFIARRLELADVNFEKSRYRSELDEFVRDYIKIDGIFVLRMITIHSGILM CTDIVDTMWDQFLQESGHQVIQDILEDKPYGDDYDRSASAGGLSIDPGIRRKTSVLVP LMSREDLNIDQSPTTPTPQFLRPPSSRMTPAANV" gene complement(<1478521..>1481460) /locus_tag="CAEBREN_20749" /db_xref="WormBase:WBGene00159474" mRNA complement(join(<1478521..1478733,1479176..1479286, 1479335..1479898,1479949..1480304,1480497..1480638, 1481365..>1481460)) /locus_tag="CAEBREN_20749" /product="hypothetical protein" /db_xref="WormBase:CBN20749" /db_xref="WormBase:WBGene00159474" CDS complement(join(1478521..1478733,1479176..1479286, 1479335..1479898,1479949..1480304,1480497..1480638, 1481365..1481460)) /locus_tag="CAEBREN_20749" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54395.1" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR001723" /db_xref="InterPro:IPR008946" /db_xref="InterPro:IPR013088" /db_xref="WormBase:CBN20749" /db_xref="WormBase:WBGene00159474" /translation="MDLVDPLAEPCAVCGDKSTGTHYGVISCNGCKGFFRRTVLRDQK FTCRFNKRCVIDKNFRCACRYCRFQKCVQVGMKREAIQFERDPVGSPTSGNSLNGTPF KKERSPGGYENGNGNSAVSNGGGIGQENMRATQSSSVIDALMEMEARVNQEMCNRYRR SQIFVNGNGGNDADITISQGASDGSAFAPPNRPCTTEVDLNEISRTTLLLMVEWAKTI SPFMDLSMEDKIILLKNYAPQHLILMPAFRSPDTTRVCLFNNTYMTRDNNTDLNGFAA FKTSNITPRVLDEIVWPMRQLQMREQEFVCLKALAFLHPEAKGLSNTSQGLIRDARNR VLKALYAFILEQMPDEAPTRYGNILLLAPALKALTQLLIENMTLTKFFGLAEVDSLLS EFILDDINDHTTAPVSLQQHLSSPTTLPTNGVSPLTAVNSVGSSLPSVVPTITPTGIL SATLAAPLAAPVALLPHESLLNGLTGLNGNLLLSGLEQKPTLD" gene complement(<1482590..>1483185) /locus_tag="CAEBREN_09166" /db_xref="WormBase:WBGene00147891" mRNA complement(join(<1482590..1482885,1483104..>1483185)) /locus_tag="CAEBREN_09166" /product="hypothetical protein" /db_xref="WormBase:CBN09166" /db_xref="WormBase:WBGene00147891" CDS complement(join(1482590..1482885,1483104..1483185)) /locus_tag="CAEBREN_09166" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54402.1" /db_xref="WormBase:CBN09166" /db_xref="WormBase:WBGene00147891" /translation="MNYESFLSDAPKLITDEMDEEMEESDDSTSPKTNEIYQDPSLSF SLLRHHHHSFHEKDTDLVEGMKEKARSDWTLLPRRRTVHLSRSIERRLIKKTLDFMNP GSVTNAMHFSFLIHFVLRHSTEK" gene complement(<1484058..>1487132) /locus_tag="CAEBREN_21808" /db_xref="WormBase:WBGene00160533" mRNA complement(join(<1484058..1484393,1484567..1485133, 1485186..1485731,1485802..1486889,1486938..1487040, 1487091..>1487132)) /locus_tag="CAEBREN_21808" /product="hypothetical protein" /db_xref="WormBase:CBN21808" /db_xref="WormBase:WBGene00160533" CDS complement(join(1484058..1484393,1484567..1485133, 1485186..1485731,1485802..1486889,1486938..1487040, 1487091..1487132)) /locus_tag="CAEBREN_21808" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000795 (Protein synthesis factor, GTP-binding), IPR005225 (Small GTP-binding protein), IPR000640 (Translation elongation factor EFG/EF2, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54132.1" /db_xref="InterPro:IPR000640" /db_xref="InterPro:IPR000795" /db_xref="InterPro:IPR005225" /db_xref="WormBase:CBN21808" /db_xref="WormBase:WBGene00160533" /translation="MDNLETALKQAAATKPAELMRNVCLVAHVDHGKTSFADSLVSAN AVISSRMAGKLRYMDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTS ALILSDIALLLVDVIEGICSQTEALIRQVIRNGQVMILVINKIDRLRVELKMSSSEAY NHMALLIQGINSCISQVLGGIVLEEDTWEDIEEAEARLHFDPAKGNVIFSSALHSYAF GCEDFATIAAEKMNVEKSVLIPAMFGDFWIDSTGSIRDGAAAKNKATLFERIVLEPLW KLHDLGLVENDLTKLSDAAKKLGFTLKSRRANEAFDELMRTWLPLPRASFRAVARAPN VRTTFNAQNRLDHLTGNRKDHPLRPFILQCDPESMTIVFVVKLLQTEDKSLTSRRAIC RILSGTLRKGDILFVLQQQVSNKPASTTIERISILRGRDSIPTDMVTSGMVCAIDAEI LLQNTTLCDKPDCPSLKIGSQTGEALVRVSISTQQLDDMDDLREKLKLLALLDTSLKV MELENGELAMITAGEVHLQKCIKDLNDLGLVDLDVSEPIVPFMETVIEDPNLAAPQIA EQETDCRIREALHIKLRVAPLGDVVVEFLDKNSALISAIRRGEADQTETDEFQKKLTA VCVENLPTLKGSYWYRKPKELIETMIERIWAFGPERARSNILFNNVQSYDRDLVWRKT EFGVRRYDQALVGGFELLCNSGPLCNEIMHGVAVIVEEWTVDEEDGAIGGQMMSAMKA TCSAAAKKTALRLVAAMYKCTVTTASQALGKVHAVLSQRKSKVLSEDINEATNLFEVI SLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDPYWTPSTLEEIEEFGLKGDS PNHARGYMDAVRRRKGLPTEDLIVESAEKQRNLKKNK" gene complement(<1488463..>1490035) /locus_tag="CAEBREN_02692" /db_xref="WormBase:WBGene00141417" mRNA complement(join(<1488463..1488544,1488778..1488952, 1489003..1489143,1489180..1489297,1489348..1489863, 1489922..>1490035)) /locus_tag="CAEBREN_02692" /product="hypothetical protein" /db_xref="WormBase:CBN02692" /db_xref="WormBase:WBGene00141417" CDS complement(join(1488463..1488544,1488778..1488952, 1489003..1489143,1489180..1489297,1489348..1489863, 1489922..1490035)) /locus_tag="CAEBREN_02692" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54116.1" /db_xref="WormBase:CBN02692" /db_xref="WormBase:WBGene00141417" /translation="MDIVVVLALVVLGFVFILSLIILVITCQRRRHSRAKSKILVPFE NPPIRFSRNATAADTVDNIETMEQLNFLLTELLDKNEWLFEARGIMQHVIAVLTLTRS VTSKLAEVEPPVARSPFHDAITMAMRNIYPRFDDLIESIAAQPIDMRLLEARALSLGT VTWSLYLPYTLLDPNNKEEIQQPLNQLNLHLVTIRTAAHLISMAEKGAEDKLDAVDFK DHLMRIRRQIRGDTVLEDTVATKAEAARRRSNDEDDDDEESHDPNGLVDKRLLLSASD HEKMPLVESEAIIDMIELSRVPLIEQEHLLKSNGVSDGNHKQTPLHHLHHHHHHHPHH MTNGSLNTVEEINEDDHHGEGTSTSCSSSSTSSASSSSSTHQIDPKA" gene complement(<1490199..>1503150) /gene="Cbn-zig-1" /locus_tag="CAEBREN_06498" /db_xref="WormBase:WBGene00145223" mRNA complement(join(<1490199..1490225,1496300..1496577, 1499638..1499727,1500577..1500600,1500654..1500737, 1500791..1501169,1501537..1501587,1502479..1502564, 1502677..1502745,1502868..>1503150)) /gene="Cbn-zig-1" /locus_tag="CAEBREN_06498" /product="CBN-ZIG-1 protein" /db_xref="WormBase:WBGene00145223" CDS complement(join(1490199..1490225,1496300..1496577, 1499638..1499727,1500577..1500600,1500654..1500737, 1500791..1501169,1501537..1501587,1502479..1502564, 1502677..1502745,1502868..1503150)) /gene="Cbn-zig-1" /locus_tag="CAEBREN_06498" /note="contains similarity to Interpro domain IPR003599 (Immunoglobulin subtype)" /codon_start=1 /product="CBN-ZIG-1 protein" /protein_id="EGT54295.1" /db_xref="InterPro:IPR003599" /db_xref="WormBase:CBN06498" /db_xref="WormBase:WBGene00145223" /translation="MKNLLLITFVLVGSVSALGGRGSKHALALVAARSSELHPLHATD PITIWCAPDNPQVTIKSAHFVKLPETTKLEATLNPTKKNATYTFGSPSVKDAGEYRCE LDTSYGKISHAIFIYSRPVVHSHEHFTEHEGHEYHLESTGTTVEKGEVVTLTCPVFGY PKPVPYKFISLLLTSMLPARTASCLFLAKKFLRSDNTIFFRLSKKFQMILLRPLVNCT VFHSQNNFLLTKNRTFPALSKSVTMEGTTIIVSSANYTDGGTYSCEAVNEYTLNGKTS KMLLVVDKMVNVKSEFQWVYPLAVIIITLLLLVLIIVVCEWRLNLLLIFIPIISLLLM FIFPRPNFRMPFLSVSTQTKLLKEEAYTLKHAQTCLLQLVKTLNERQRVEGKRRRGGR QAIVRPTELSRHGGQPVPKEAEKEKRKRQHIHTDQTHGNSSFTFWYSLPLTDWPPLRH NNDSFI" gene complement(<1507732..>1509031) /locus_tag="CAEBREN_17131" /db_xref="WormBase:WBGene00155856" mRNA complement(join(<1507732..1507986,1508045..1508134, 1508491..1508570,1508617..1508847,1508917..>1509031)) /locus_tag="CAEBREN_17131" /product="hypothetical protein" /db_xref="WormBase:CBN17131" /db_xref="WormBase:WBGene00155856" CDS complement(join(1507732..1507986,1508045..1508134, 1508491..1508570,1508617..1508847,1508917..1509031)) /locus_tag="CAEBREN_17131" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54449.1" /db_xref="WormBase:CBN17131" /db_xref="WormBase:WBGene00155856" /translation="MESKLTTSSLRFLIVLLCGTPVVEGLRPRGIGLIRLPFGVSDHR SGPYLPNLYIAGNKLYHKTQPVPDVSLPGQEKHFSGHAQLNPFTHMVAVGTNNDFGDS WGAGYALQGVNFLDLNLRKNYRQYANMPHLFTDGQHQPFQNSFIVGAEIDSSKFTSHA VALDIPLPGINEMFDFQEETLEKHDEELTDIYHTRMNFPIPTTNQRFPFKAHFFERIN DIDLNMAHIIPNLNIHGIDRDKIVDQLVQNKANPTLVG" gene <1511509..>1511749 /locus_tag="CAEBREN_17675" /db_xref="WormBase:WBGene00156400" mRNA join(<1511509..1511597,1511653..>1511749) /locus_tag="CAEBREN_17675" /product="hypothetical protein" /db_xref="WormBase:CBN17675" /db_xref="WormBase:WBGene00156400" CDS join(1511509..1511597,1511653..1511749) /locus_tag="CAEBREN_17675" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54431.1" /db_xref="WormBase:CBN17675" /db_xref="WormBase:WBGene00156400" /translation="MAGCVIALYDVKIKKDHKWTNHSEDSIDLVYINLRSLRRIQCLH EAETCNCNMPKNGFSHL" assembly_gap 1528565..1555893 /estimated_length=27329 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1559101..>1566899 /locus_tag="CAEBREN_05776" /db_xref="WormBase:WBGene00144501" mRNA join(<1559101..1559335,1561511..1561637,1563521..1563579, 1565045..1565845,1565919..1566142,1566783..>1566899) /locus_tag="CAEBREN_05776" /product="hypothetical protein" /db_xref="WormBase:CBN05776" /db_xref="WormBase:WBGene00144501" CDS join(1559101..1559335,1561511..1561637,1563521..1563579, 1565045..1565845,1565919..1566142,1566783..1566899) /locus_tag="CAEBREN_05776" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54114.1" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR001723" /db_xref="InterPro:IPR008946" /db_xref="InterPro:IPR013088" /db_xref="WormBase:CBN05776" /db_xref="WormBase:WBGene00144501" /translation="MFSTLSSSAIDDILRHAVHFSQGTAAIAPSPVSFISATTQQQGT SYPIFDTTSTSALHHYSLPVSMHTPSSTTGPATTGHGRGRRKNSTINLICVVCGDQAF GKHYGVNACNGCKGFFRRSVWNNRQYLCRFEGRCAIAKEHRNVCRACRLKQCFVAGMN PRAVQSEREQKGSPDQNQDVEEDDYKDLSSPDTCSVEIQTDVDDVKPMDQTVPPLPSM EAEMARFSEQLVEMHRAVCSYVDPVVKKEEPEIKMETEASSATKVVFMNAFFNPGMMS PRTPLVITGERIATVQDVMDEWRRNFVLFSDWLRALPEFNQLSVEDQIVLAKNRYGPF HWWLCANWTVTAGCEGVCYSNGAYFPKQIEAQCIPDVKGSSSRMYESLSLPIKELQLD ETEVVLMLAVILFSDEVTELPDLSQAGKDHVRTVGNRFVRMLHHHVNSKDYGESLKEQ PSMESGDEASNVTESQAAVRIAKMMILLSATTNLVYLTSDNIQLMEVLHVVPSQYLCH EVQLIHDSYETP" gene complement(1564458..1564539) /locus_tag="CAEBREN_27495" /pseudo /db_xref="WormBase:WBGene00188106" tRNA complement(1564458..1564539) /locus_tag="CAEBREN_27495" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN27495" /db_xref="WormBase:WBGene00188106" gene <1569401..>1571016 /locus_tag="CAEBREN_05016" /db_xref="WormBase:WBGene00143741" mRNA join(<1569401..1569469,1569515..1569658,1569704..1569807, 1570722..>1571016) /locus_tag="CAEBREN_05016" /product="hypothetical protein" /db_xref="WormBase:CBN05016" /db_xref="WormBase:WBGene00143741" CDS join(1569401..1569469,1569515..1569658,1569704..1569807, 1570722..1571016) /locus_tag="CAEBREN_05016" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54162.1" /db_xref="WormBase:CBN05016" /db_xref="WormBase:WBGene00143741" /translation="MFRFVFLSLVLTISGSLAIQCHTGLKFIKGTSVGTATVNCDNSA AYCYNMSASAAALIEVTKAGCSMWRCMFAQNKCIGTTFQNIPISLCCCNTPLCNAGGE GAIQSQNSGGWNAEPEHQLTSLNKEEAQRRFDSAELDEDHPSSSRAARFTDPTHPTAS EEPTVKTLNEETTILGGTEASEETSSLSEATTTSQLGEEVKIQ" gene complement(<1571265..>1576096) /locus_tag="CAEBREN_11637" /db_xref="WormBase:WBGene00150362" mRNA complement(join(<1571265..1571366,1571409..1571664, 1572273..1572448,1572496..1572633,1572681..1572802, 1573918..1574053,1574104..1574283,1574594..1574745, 1574892..1575205,1575876..>1576096)) /locus_tag="CAEBREN_11637" /product="hypothetical protein" /db_xref="WormBase:CBN11637" /db_xref="WormBase:WBGene00150362" CDS complement(join(1571265..1571366,1571409..1571664, 1572273..1572448,1572496..1572633,1572681..1572802, 1573918..1574053,1574104..1574283,1574594..1574745, 1574892..1575205,1575876..1576096)) /locus_tag="CAEBREN_11637" /note="contains similarity to Pfam domain PF01699; contains similarity to Interpro domains IPR004481 (K+-dependent Na+/Ca+ exchanger-like), IPR004837 (Sodium/calcium exchanger membrane region)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54299.1" /db_xref="InterPro:IPR004481" /db_xref="InterPro:IPR004837" /db_xref="PFAM:PF01699" /db_xref="WormBase:CBN11637" /db_xref="WormBase:WBGene00150362" /translation="MRVGSTVRSRTKARVVRRLILLPVAIVVLVGTAHVLRERRSIDR DPEMMGGMNGVSPANVSQPFWKSLLPVCNRSLVPPAPEVNDDGQFPPDPFSLEQRQNG FVVLHMCGLIYMFVSLAIVCDEFFVPSLDVLTEKLSLSDDVAGATFMAAGGSAPEFFT SVIGVFIAQNNVGIGTIVGSATFNILCVLAFCTLFSKSILDLTWWPLFRDVSIYMLAL AMLVFFFMDEMITFREAFAMFCVYILYCTVMKFNVQLEQLVKGGGDSEEASAHETQKL AADVPHNNNNNDVAQLEGNDLRRRSSARRQSVPILHSGTMFRNGIMQLMNHTLEQLPE DSEEDDSSRSRSNVNVESHDMHRLNVNQSIPDRRSSQIEEIKSLLEEEEEKPLDMTWP ETWMKRLTYVLLAPVVVPMWVTIPDVRRPHNRAWYPATFIISILWIAFFSYLMVWWAN TIGETFVIPTEIIGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDVCVGL PVPWLLFFLMEYIKDPSAPLTPISVSSKGLLCSVGMLFIMLIVLVFAIFLSGWKMNKV FGILMIVSYIFFCVFSVGLETDKLICPLNICG" gene <1576452..>1576631 /locus_tag="CAEBREN_23075" /db_xref="WormBase:WBGene00161800" mRNA join(<1576452..1576583,1576626..>1576631) /locus_tag="CAEBREN_23075" /product="hypothetical protein" /db_xref="WormBase:CBN23075" /db_xref="WormBase:WBGene00161800" CDS join(1576452..1576583,1576626..1576631) /locus_tag="CAEBREN_23075" /note="contains similarity to Interpro domain IPR013838 (Beta tubulin, autoregulation binding site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54151.1" /db_xref="InterPro:IPR013838" /db_xref="WormBase:CBN23075" /db_xref="WormBase:WBGene00161800" /translation="MRDIFYLTSHRLKKHMNIEKKYQGGLEVVPQSLGQGGIRSTRFC V" assembly_gap 1580718..1580727 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1583240..>1583305 /locus_tag="CAEBREN_15802" /db_xref="WormBase:WBGene00154527" mRNA <1583240..>1583305 /locus_tag="CAEBREN_15802" /product="hypothetical protein" /db_xref="WormBase:CBN15802" /db_xref="WormBase:WBGene00154527" CDS 1583240..1583305 /locus_tag="CAEBREN_15802" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54103.1" /db_xref="WormBase:CBN15802" /db_xref="WormBase:WBGene00154527" /translation="MNPPRTEKKDTQVDKHVNHLQ" gene <1593519..>1596302 /locus_tag="CAEBREN_32703" /db_xref="WormBase:WBGene00194756" mRNA join(<1593519..1593767,1593894..1594013,1594063..1594224, 1594273..1594397,1594448..1594839,1594885..1595108, 1595156..1595669,1595749..>1596302) /locus_tag="CAEBREN_32703" /product="hypothetical protein" /db_xref="WormBase:CBN32703" /db_xref="WormBase:WBGene00194756" CDS join(1593519..1593767,1593894..1594013,1594063..1594224, 1594273..1594397,1594448..1594839,1594885..1595108, 1595156..1595669,1595749..1596302) /locus_tag="CAEBREN_32703" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54437.1" /db_xref="WormBase:CBN32703" /db_xref="WormBase:WBGene00194756" /translation="MSHSDDDYPELDVSTDGNENALTAADGYGEVVGAPPSSDVESDE SAYHTPSSEENVIRQYEYNECDLYDSGSEEFDVEGYENEQLADLHIHDMSSYVDVGNE QESNAAHNFQEFEDSNKEIFQVLLPSAMIASIEHMTIGFEPSVINDCLKDVGYCLEVV AMMLLGAEKFATIPRAPVDWCHALKDANHLLFENGKFYPRVPESLRAHCTSLIEGASR LSQFEEKKKKEQETYKSEEFELRVLYTFNMIAELLNAVRDEQRQLKIGYSHLMNAYQA MVEGLKYHDIFKRYKGTLSLNDPKKLWNSQWFNEYTGRSSLMKFIHMARFSEIAVTNT NPRTYYFRADDDVPQRDVKLFIKKDFDEVREKWRSGNQANRNFGRNYGAGGQRGEGRG PSQQKKKTIEQDPNYKSARFNGLMDGVDDGSLEPSTSTRYNRERSPPRPIRNRSLSPR ENRSPIPARSPSPFDEPTSQAQEQAARPSSPESQSDPPQRVALSDPFGGRPVQRREET NFGGSSDNQLTRDNYGRNRAGEVRRIDVHLIGETSSEGEITSDGSYSNEDEDTKQAKR ERRLAVKKKKDEREMRRRKQHEENRNKPIEQTRFSVSQFKKKTPQNAPRSPERRRQES PLPFEDEPTTSTEPLPPVELPVEEPTPVQTTTADSDDEPLPVRPQATNKAPAVVTDTM TNALSHQAQVPYRPSALDVQKKKMEQEEKAKKASMNAVKKYGADAVLAYHPALFSQNS GPGPSSSPLPPPQAYIEPEPPSGFGNSQRFVDYIKRFFV" gene <1596332..>1599208 /locus_tag="CAEBREN_20554" /db_xref="WormBase:WBGene00159279" mRNA join(<1596332..1596379,1596990..1597187,1597233..1597443, 1597487..1597937,1597984..1598391,1598733..1599043, 1599090..>1599208) /locus_tag="CAEBREN_20554" /product="hypothetical protein" /db_xref="WormBase:CBN20554" /db_xref="WormBase:WBGene00159279" CDS join(1596332..1596379,1596990..1597187,1597233..1597443, 1597487..1597937,1597984..1598391,1598733..1599043, 1599090..1599208) /locus_tag="CAEBREN_20554" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000644 (Cystathionine beta-synthase, core), IPR002550 (Protein of unknown function DUF21)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54390.1" /db_xref="InterPro:IPR000644" /db_xref="InterPro:IPR002550" /db_xref="WormBase:CBN20554" /db_xref="WormBase:WBGene00159279" /translation="MGTSQQHDQPPVFNEQKRARRILRFRRYSNYLVVSFSLFSSVFT VLFTTNVEKMLNGAPNESILKIAVPAMISLIFAEMIPQAVCNSNLGFDLASGLWFVSG LIFIVTFPIAYPVSLVLERFLKRDVREVLTEEEKTCMIQNMAKNANEKVKTILENATT FTNKKVGELMIPISDVFMLSRSQKLNRSVIHTVVTVYNNFPIQTILTLVEKGYTRVPV YDDKNRNTIVGLLNMKDLNLVTCDLSKEPPVKDVLRQLDSLKEENKKVKFEAKYVNID MNAQLLLNQMRTGDFHFACVVKYMPYDSKVLGIITIEDILEELFGKIDENNERRVRSS VDERADNTVIGWCREAGTDEKYPLSFSQQLRVLQYLMAECQVLRSLDIGILKAKQLLS LDRIRIAKPKEKLELNEMFLVIWKGSVTIENILETFDQVVKVPSKRSSSKDTVSKERK AAVPALIIGKQLLNKLMKSLGSPFREVILEKDDVRQVTAITEVFYFKVTLPKEEFDHS LCLFQLRLEDLLNTINGCKMIKKNDKTLLGESLIQRLNSRQSTPVSTTPIQRSPSKSL EPKSPDEKIPLLKKD" assembly_gap 1596636..1596645 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1600679..>1603315 /locus_tag="CAEBREN_20062" /db_xref="WormBase:WBGene00158787" mRNA join(<1600679..1601026,1601075..1601386,1601431..1601825, 1602379..1602841,1602889..1603040,1603084..>1603315) /locus_tag="CAEBREN_20062" /product="hypothetical protein" /db_xref="WormBase:CBN20062" /db_xref="WormBase:WBGene00158787" CDS join(1600679..1601026,1601075..1601386,1601431..1601825, 1602379..1602841,1602889..1603040,1603084..1603315) /locus_tag="CAEBREN_20062" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54189.1" /db_xref="WormBase:CBN20062" /db_xref="WormBase:WBGene00158787" /translation="MKGVAPIIDSKRSTRKNNRLPPILTPKFPSERPLKKRPSRENII LDNLIEAPPMFQSERVIVNEEKDDNSLEGEKGEILEEDVRTVDEMLPDEPIIEQCKEA PENAHASPSDQPTFDFAQKVKAEKPEKVEKPPEKPSAFGERKPDKPSSRDKNSGRSED RRKKKTKEAVSSDDKRSTDEKKKNDLPAKKPSAENPNSEDNRRSARRSKRHHKKIKQP VGKQGQQGTPAPQGNTPSIYQQPVLSAAPKTDQSLKIAVNERSIEGDKPPKKAKIQQT PKKEDAYFVQMQQTPQKPAVAKSPAPTSATAPQQAPSRSVQLPKDGNNNREKSKFRQT VHKFTKFWSRKSDCVANPSPETLSKCYVRAEYGVLPSDYQPDLKNMPEDLKKSTPSEK AYPPQPSAPTVFVNGRPFWLIRDRTEIPKVRIQLHRPLKQMYQGNPTSILPQWRRTEP FFDPRTDPLCRMMQIDQVMGVEGDKTKELNRVCANTFHATIMFETDKLAWDEKLKKLG LTKPGEQKKNTQKRMGKKEMCPKSSIEESNKMKKPLKIDAPTKLMNYNRKSRPKLNEK TCSFGPPRHFNSVNFEPGKLGRLLRKQSSPAPSVTPVKSSSSTSITPIPSSTSVSSSV SSTAEGKKT" gene <1604443..>1606875 /locus_tag="CAEBREN_29324" /db_xref="WormBase:WBGene00191289" mRNA join(<1604443..1604447,1604491..1605013,1605993..1606484, 1606540..1606744,1606868..>1606875) /locus_tag="CAEBREN_29324" /product="hypothetical protein" /db_xref="WormBase:CBN29324" /db_xref="WormBase:WBGene00191289" CDS join(1604443..1604447,1604491..1605013,1605993..1606484, 1606540..1606744,1606868..1606875) /locus_tag="CAEBREN_29324" /note="contains similarity to Pfam domain PF00102; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54256.1" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR003595" /db_xref="PFAM:PF00102" /db_xref="WormBase:CBN29324" /db_xref="WormBase:WBGene00191289" /translation="MAIKPQAKKSPNTKTNNNKRREPDQRVSEEKTAINGPKSKAMPA KKFASKISISTDKKKSSTELKPKKSHSTMKTAYESDTFEEKNKDKEKEKKKKEKWSGE EAAGKFVKSIESVNLKEEYDEIQKMSVQAERCKIWQAHSSRNRNPDYKCYDDNRVIVQ MCKSDYINGTKINVPNFAPLVYLLQLPKMETADAVEEFWRVIFHEQCQSLHIIARPDE MQSPEKLFAQEPGGYLYANGFFINTRKVEKKDTAKADLYVVELLPEGCSNSVMCSVYV HTHWRQFAGPDRFSPPLKAAQQIAKNENPNSPTIIASTNGAGRNAALLSLAVIIDQLA KGKEPKIQDIVRTIREQRPQSVDSFPQYLNLYLTTNHLIKSKVPGNDDIQKKLKHFNE KAAHFVPSSTMKQPTEES" gene <1609419..>1610397 /locus_tag="CAEBREN_07143" /db_xref="WormBase:WBGene00145868" mRNA join(<1609419..1609532,1609957..>1610397) /locus_tag="CAEBREN_07143" /product="hypothetical protein" /db_xref="WormBase:CBN07143" /db_xref="WormBase:WBGene00145868" CDS join(1609419..1609532,1609957..1610397) /locus_tag="CAEBREN_07143" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54432.1" /db_xref="WormBase:CBN07143" /db_xref="WormBase:WBGene00145868" /translation="MAITIFLQEIVKYPLVALIAGIAVGVVFGDIIERKVVEAILLLR RYAPEPHISQDDNEYEDDSEYEDDSDDEDSQVAAALRNEIDDLKERLEQANQLIRAAN RTNSELKHEKAQFEKELKQVKEEFKRSQEDLENELEEIVRDLMQQAQMKKEAYEEAVE EAKFDRLEEVNADSSFEMVNDIQE" gene complement(<1610896..>1612221) /locus_tag="CAEBREN_18169" /db_xref="WormBase:WBGene00156894" mRNA complement(join(<1610896..1611084,1611134..1611328, 1611373..1611591,1611738..1611917,1611966..1612067, 1612117..>1612221)) /locus_tag="CAEBREN_18169" /product="hypothetical protein" /db_xref="WormBase:CBN18169" /db_xref="WormBase:WBGene00156894" CDS complement(join(1610896..1611084,1611134..1611328, 1611373..1611591,1611738..1611917,1611966..1612067, 1612117..1612221)) /locus_tag="CAEBREN_18169" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine-protein kinase domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR001245 (Serine-threonine/tyrosine-protein kinase), IPR017442 (Serine/threonine-protein kinase-like domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54352.1" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="WormBase:CBN18169" /db_xref="WormBase:WBGene00156894" /translation="MNKRYETIRHLGEGQFANVYMAKDLETGEIVAIKKIKLGSREEA KDGINRTAIREIKLLKEIHHDNIITLRDVIGHRTSIQLVFDFMDTDLEHVVKDQAIIL SPSHIKNITMQMLLGLEFLHTHWILHRDLKPNNLLMNSVGRVKVTDFGLARFFGSPNR NYTHQVVTRWYRAPELLFGARSYGVGIDIWSVGCIIAELLLRTPIFPGETDIDQLVKI YNVLGCPTLETWPNMNKMNSFITLRADNETPGLNFIFSAAPQDLIDLLIKMWTFDPVK RVNCTQALQAEYFRSQPYCCLDEELPLPNKKPAKRSRRLDEEGGTAARRLLFD" gene <1614141..>1616644 /locus_tag="CAEBREN_29479" /db_xref="WormBase:WBGene00191444" mRNA join(<1614141..1614197,1614252..1616216,1616267..>1616644) /locus_tag="CAEBREN_29479" /product="hypothetical protein" /db_xref="WormBase:CBN29479" /db_xref="WormBase:WBGene00191444" CDS join(1614141..1614197,1614252..1616216,1616267..1616644) /locus_tag="CAEBREN_29479" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54271.1" /db_xref="WormBase:CBN29479" /db_xref="WormBase:WBGene00191444" /translation="MSEELETLFKQNDMAQQRMRIGELQGQVKAYEFVVQDLKAKYER EQEENKALRLTLALRTDCESELRRSSGEKSPGVEDLEIKLVIAEKEIMVMESTNKELL ATLNNTRAQLGKILRERNQKVKEIEQLEEALENMETRHNRRPEELNREFESTSYAANI QLLVDELRDQSSRWAAEKVILTKKFEETEDDLRKENEKLKKQKEDIVNHSNNSEKMWT ERLKEISADLDRFQSRQLAKSVKSEKSIVAETEAEIQELSRKLKDAVEAIEELELTNT GLQKQLDKANIKLVKLEIELESQQFLVNEQNVSSAESADYKLQIDRLLQEKTKMDELC ESQQRDLVEITEKHTQQTITFSNEKAKFCHDMERVEERWNNEVVKMREHHDVMERMLS AATKDAMDEKKLFEEESCELREKVEELQCLLKDQQRQLETNNQETQQLRDQLKEARAV QATSXXXKTWWLTKSIRNLSEQRREELESKKSEIEALTALRNHDEKEREELMIELESE RKNCKEEISTRVKMNNQIVDLQKKNEELQEENEELHKLNEALEEKVESVTDQWRSECE IYENNITFVTQKHEMEREDAIKKIQNAKKIEEKLYANMNHLVKENQEFEKMLKTQRRE ATELHKATVELSKMEMDNLRMLLDMEKNEVLNEKATFIESMEKQMKVMEQITAQDKLQ LNKAEAKVATLQNEVRSLGESRAVDRLLWRHEVEQLKDTNEKLKENMGVEALDDVVDG STSDDSDCSSDSDCSSDSDCSSDSEDDESLDIVEDDEIPMKDRVVKKREEWELVDEDE D" assembly_gap 1615556..1615565 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1618136..>1621546 /gene="Cbn-epg-2" /locus_tag="CAEBREN_14610" /db_xref="WormBase:WBGene00153335" mRNA join(<1618136..1618213,1619666..1619794,1619846..>1621546) /gene="Cbn-epg-2" /locus_tag="CAEBREN_14610" /product="CBN-EPG-2 protein" /db_xref="WormBase:WBGene00153335" CDS join(1618136..1618213,1619666..1619794,1619846..1621546) /gene="Cbn-epg-2" /locus_tag="CAEBREN_14610" /codon_start=1 /product="CBN-EPG-2 protein" /protein_id="EGT54208.1" /db_xref="WormBase:CBN14610" /db_xref="WormBase:WBGene00153335" /translation="MSIVIPNPDLQQENARLLKKIQYYEQDLMGPAAIKLEDLADKLI QKENEISNLKTKLNGVSQELQTLKEDRSVEEEATRSAKMYSTLLEKMLDEERASYAPK CSGDSCPAVREFKAELENAQQEKKELEEMMEEFRCMWSKDTSDFQQTMTTVKEEGAKL QLEISRFQHLYQEAQDSISKFSDAILVEEQARREAEARSSELENQIEILSIKIEKQED ELQVLSEKNADIEDQLSEQEYQLKCQDEELAEALDKLLKSGEKAVQQAEKMKMGDLAH AVELSELTEQLETAKKESNEQIRKLRNEAAKLAHDHSVHKNATAIQIQMIKSESNLHY EKYVKFENEALKLQKSLEESKQNSETEAVKFTTTIHSLESELCATKSRLEAVTCDFMN LTAVQQEVFEDSLKLKEDIETLKEDIKYLSKKNECTMAENEQLREKLNGTVRDYVAER EKLEQKQEEAIFKMQQVHSKQIEEVKHNNMLAINQEMIKAQMALDSTKKKYAVEYEAI KTKLVHSVSESDRLKKESEAKIASLCRNVSTLESKNASLLAECAQLKTSQSQANATLA KLNSQIDYLEEEAIMQKECHEKEIQDIKEAHRIILDNMGVEELDEEAHEDVEAIEVKN DSAQWEFVDEE" assembly_gap 1622481..1622924 /estimated_length=444 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1623061..>1623947 /locus_tag="CAEBREN_32103" /db_xref="WormBase:WBGene00194068" mRNA join(<1623061..1623519,1623570..>1623947) /locus_tag="CAEBREN_32103" /product="hypothetical protein" /db_xref="WormBase:CBN32103" /db_xref="WormBase:WBGene00194068" CDS join(1623061..1623519,1623570..1623947) /locus_tag="CAEBREN_32103" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54239.1" /db_xref="WormBase:CBN32103" /db_xref="WormBase:WBGene00194068" /translation="MSNQIVDLQKKNEELQEENEKLRKLNDALEEKVESVTDQWRSEC EIYENNIRFVTQKHEMEREDAIKKIQNAKKIEEKLYANMNHLVKENQEFEKMLKTQRR EATELHKATVELSKMEMDNLRMLLDMEKNEVLNEKATFIESMEKQMKVMEQITTQDKL QLNKAEAKIAILQNEVRSLGESRAVDRLLWRHEVEQLKDTNEKLKENMGVEALDDVVD GSTSDDSDCSSDSDCSSDSDCSSDSEDDESLDIVEDDEIPMKDRVVKKREEWELVDED ED" gene <1625437..>1627785 /locus_tag="CAEBREN_30095" /db_xref="WormBase:WBGene00192060" mRNA join(<1625437..1625514,1625905..1626033,1626085..>1627785) /locus_tag="CAEBREN_30095" /product="hypothetical protein" /db_xref="WormBase:CBN30095" /db_xref="WormBase:WBGene00192060" CDS join(1625437..1625514,1625905..1626033,1626085..1627785) /locus_tag="CAEBREN_30095" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54246.1" /db_xref="WormBase:CBN30095" /db_xref="WormBase:WBGene00192060" /translation="MSIVIPNPDLQQENARLLKKIQYYEQDLMGPAAIKLEDLADKLL QKENEISNLKTKLNGVSQELKTLKEDRSVEEEATRSAKMYSTLLEKMLDEERASYAPK CSGDSCPAVREFKAELENAQQEKKELEEMMEEFRCMWSKDTSDFQQTMTTVKEEGAKL QLEISRFQHLYQEAQDSISKFSDAILVEEQARREAEARSSELENQIEILSIKIEKQED ELQVLSEKNADIEDQLSEQEYQLKCQDEELAEALDKLLKSGEKAVQQAEKMKMDDLAH AVELSELTEQLETVKKESNEQIRKLRNEAAKLARDHSVHKNATAIQIQMIKSESNLHY EKYVKFESEALKLQKSLEESKQNSEKEAVKFTTTIHSLESELCATKSQMEATTRNFMN FAAAQQEAAKDSLRLKKDIETLKEDIKYFRKQNECTMAENEQLREKLNGTVRDYVAER EKLEQKQEEAIFKMQQVHSKHIEEVKHNNMLAINQEMIKAQMALDSTKKKYAVEYEAI KTKLVHSVSESDRLKKESETKIASLSRNVSTLESKNASLLAECAQLETSQSQANATLA KLNSQIDYLEEEAIMQKECHEKEIQDIKEAHRIILDNMGVEELDEEAHEDVEAIEEKN DSAQWELVDEE" gene complement(<1627952..>1629577) /locus_tag="CAEBREN_32604" /db_xref="WormBase:WBGene00194569" mRNA complement(join(<1627952..1628125,1628169..1628276, 1628334..1629388,1629433..>1629577)) /locus_tag="CAEBREN_32604" /product="hypothetical protein" /db_xref="WormBase:CBN32604" /db_xref="WormBase:WBGene00194569" CDS complement(join(1627952..1628125,1628169..1628276, 1628334..1629388,1629433..1629577)) /locus_tag="CAEBREN_32604" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54252.1" /db_xref="WormBase:CBN32604" /db_xref="WormBase:WBGene00194569" /translation="MSKNQTIQEFDENFFSSFAVPKVKDYSRLSSSPSRDQPCDSSYF EKHFPNLECDTPVKMRIPAVERDSDDALPVANLENFLSSSSSSENTVTADHRDTSETA PVKQVQNIREPLKIVPNEAANYGESQLIEGLEKLTMFAPKAPEERLSQRRRSEQKKKQ EEETKRRSVLAPASRIVPPNRARSISTKRSVSREPSNVAAGNPAVLRSRQNSVTRTIS APIPTGGGVVTRAMAARAAETTTSKPTIRRSVMPIKVAQKTPVSQVKKDGAPCSGDRS RDRTRRTNTTGSSSVRRSVMPDKPAGSSTPIAPPRRSASATKATVSASKMTPRTRPIA TANRSSILRMNMVKPTAPPATLAAETDAQQKRTITRPLPVAATARTRQPLRVNPTTPS STVKKPALQSSGQRATRQPLTLTRTRSVDRVGQQPSVTTGTPSQKTSRTDLFNRLATP KAAATPTRVSNDGASTSVRKSAVRPVPSYVYNVVNGYEQKWIY" gene complement(<1629874..>1632045) /locus_tag="CAEBREN_00019" /db_xref="WormBase:WBGene00138744" mRNA complement(join(<1629874..1629999,1630046..1630729, 1631962..>1632045)) /locus_tag="CAEBREN_00019" /product="hypothetical protein" /db_xref="WormBase:CBN00019" /db_xref="WormBase:WBGene00138744" CDS complement(join(1629874..1629999,1630046..1630729, 1631962..1632045)) /locus_tag="CAEBREN_00019" /note="contains similarity to Pfam domain PF03941; contains similarity to Interpro domain IPR005635 (Inner centromere protein, ARK-binding region)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54314.1" /db_xref="InterPro:IPR005635" /db_xref="PFAM:PF03941" /db_xref="WormBase:CBN00019" /db_xref="WormBase:WBGene00138744" /translation="MPPKKRASSRKQGDPTNKALIGHNEFSKPSRDLPRNSNRQVKEE PMDYEEDTQPARPQKPKAKAKRSHAQTESTSKPAVQDDPDQAAFMLSQAQYLIQQAAE TRARAEEQKRVEEKRAAEERAEAARRMQAEEQSARLLELRKEEEERLKVQKEREEEEL RATLAKQALKKAKQEALNKTPPPTVYEMTPPRTYQANSKNDYGLHDLNSDDETDQEDD PRKEVPAWADFAVVRENVRKHVINPPFDIADFFGEIEKPNLKEIFGETVKAKKRGSSA VWRSSPSVTSSSRTPLQDISE" gene <1632650..>1634114 /locus_tag="CAEBREN_28515" /db_xref="WormBase:WBGene00190480" mRNA join(<1632650..1632732,1632776..1632944,1632991..1633176, 1633225..1633596,1633624..1633852,1633897..>1634114) /locus_tag="CAEBREN_28515" /product="hypothetical protein" /db_xref="WormBase:CBN28515" /db_xref="WormBase:WBGene00190480" CDS join(1632650..1632732,1632776..1632944,1632991..1633176, 1633225..1633596,1633624..1633852,1633897..1634114) /locus_tag="CAEBREN_28515" /note="contains similarity to Pfam domain PF00400; contains similarity to Interpro domains IPR019781 (WD40 repeat, subgroup), IPR001680 (WD40 repeat), IPR015943 (WD40/YVTN repeat-like-containing domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54250.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR019781" /db_xref="PFAM:PF00400" /db_xref="WormBase:CBN28515" /db_xref="WormBase:WBGene00190480" /translation="MEGDNDVKPTKNIDETLVIQHDWHLGLREPISQFFLGIRRSGAA RTEYFDVQITKLVDEYGFAVMPGEGSIKSTDFENVSLDMLKNLHVTFQGKTTIFVAPI SEQKIEGLKSAPRCFDVSCTGSTYVTADSSGNLVIASAIKAETLRILKGHAMDVYRCM YFPSGLVVLTCGMDMTIRIWAIDTGDCARTLKGHIQPVTGIGIIGVGREVLSCSKDGS ARKWNCGSAETVEVWNFEKGACVDLAVSVDSSRFAVICVNNHLSVIDLNGEKENMYVY QTRRDIQLPSEPNTLCFSDDEAGEVVFVGFEDGHVAAYNVVQQSLIGEIVTQKGSVNC LKFFCNRLIVAFNNGGVLAYPIPRSSANQASGDSTVDAVNIISAEYELTGADSDPIYD MAIHGRSVYTVCRDGFVRMYKLLWNA" gene <1634270..>1636011 /locus_tag="CAEBREN_13653" /db_xref="WormBase:WBGene00152378" mRNA join(<1634270..1634344,1634392..1634546,1634594..1634753, 1634797..1635035,1635082..1635379,1635433..1635635, 1635684..1635759,1635808..>1636011) /locus_tag="CAEBREN_13653" /product="hypothetical protein" /db_xref="WormBase:CBN13653" /db_xref="WormBase:WBGene00152378" CDS join(1634270..1634344,1634392..1634546,1634594..1634753, 1634797..1635035,1635082..1635379,1635433..1635635, 1635684..1635759,1635808..1636011) /locus_tag="CAEBREN_13653" /note="contains similarity to Pfam domain PF01189; contains similarity to Interpro domain IPR001678 (Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54307.1" /db_xref="InterPro:IPR001678" /db_xref="PFAM:PF01189" /db_xref="WormBase:CBN13653" /db_xref="WormBase:WBGene00152378" /translation="MSCLRPSHSIYLTQIRCKTVKFKPKIAKTKPLKTPSAQALDHFD FYYGPLFGKKWPSIRLGLLSPNRYLAVMNTMSRNWEAHDEILSDMGAKDLLKSVRGKT GDEVIETKRIIAEGRAEEKTQEVKKDIANPSTLSADNDSNSDEEREEMFRSAAGLGEF RASPGELSAGSLQMGQGGVKNSQNKDVEITGFEGEGVRIPKRDHFLYYPKNLRVRAFD RAVLLDFPAPMKDEVGVPSYWLLDGGSLLPVLSIGLQKGDSLLDMCAAPGGKSLLAAL SNLPSKIVCNDFKLARLGQLKRALMTYVPEDSEAIDKFVLKRKDASDVKTWDEFEAYD KVLADVPCSTDRLSVSTDEGNIFSTGSTQLRLDLPVLQTKILVNALRSVKIGGSVVYS TCTLSPSQNEAVVENAVAVARNDFAIETVEESLHQLVSHMTSSGLYRFHNTQIGALVV PFLPSNFGPMYVCKLTRLQ" gene <1636544..>1636930 /locus_tag="CAEBREN_21293" /db_xref="WormBase:WBGene00160018" mRNA join(<1636544..1636729,1636778..>1636930) /locus_tag="CAEBREN_21293" /product="hypothetical protein" /db_xref="WormBase:CBN21293" /db_xref="WormBase:WBGene00160018" CDS join(1636544..1636729,1636778..1636930) /locus_tag="CAEBREN_21293" /note="contains similarity to Pfam domain PF02970; contains similarity to Interpro domain IPR004226 (Tubulin binding cofactor A)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54199.1" /db_xref="InterPro:IPR004226" /db_xref="PFAM:PF02970" /db_xref="WormBase:CBN21293" /db_xref="WormBase:WBGene00160018" /translation="MSDADQLKQLKIKTGVVKRLIKEHASYQKQVVKDEEKAEKLAAE ATNEDEEYVAKKAKEVAKETVIMVRDAYGRLQKAVTDLQSLISTGSFSDDSAELIEAK SQLESVPASA" gene complement(<1637130..>1638585) /locus_tag="CAEBREN_00566" /db_xref="WormBase:WBGene00139291" mRNA complement(join(<1637130..1637198,1637245..1637661, 1638027..1638438,1638482..>1638585)) /locus_tag="CAEBREN_00566" /product="hypothetical protein" /db_xref="WormBase:CBN00566" /db_xref="WormBase:WBGene00139291" CDS complement(join(1637130..1637198,1637245..1637661, 1638027..1638438,1638482..1638585)) /locus_tag="CAEBREN_00566" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54425.1" /db_xref="WormBase:CBN00566" /db_xref="WormBase:WBGene00139291" /translation="MEDLPELGFSKKTRFSGDFSDLERTLIQEDVDTYSRNMDRLFAE DEKINASPSPMFGSVSSSQGSSQIEERREPTTTKNRTYFSSAAFWKRKSDSLKVGVIL TKLVQDEKLYFLMYDANKVILEKQLVDDIEFKFSKSDFGVRLDSKSGDTEKEPIEVKF VDFSTFLRFGVTIIVDKIRKPVDPVSSLHSDSNDRDESNAVNYVKNDTIVKDQENTLV IEENITREYECPESQHVISDDMIIPKKSVGIDRTSTSPLPLLVDSSSSCSEQQPPTQT VSTEDIRDLLHRIVGIELDRIEMRLNARLDRFQDNVNSRLDQQTEILEKILNNCSSR" gene <1639056..>1640706 /locus_tag="CAEBREN_15836" /db_xref="WormBase:WBGene00154561" mRNA join(<1639056..1639065,1639119..1639207,1639257..1639462, 1639511..1639901,1639949..1640557,1640602..>1640706) /locus_tag="CAEBREN_15836" /product="hypothetical protein" /db_xref="WormBase:CBN15836" /db_xref="WormBase:WBGene00154561" CDS join(1639056..1639065,1639119..1639207,1639257..1639462, 1639511..1639901,1639949..1640557,1640602..1640706) /locus_tag="CAEBREN_15836" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000795 (Protein synthesis factor, GTP-binding), IPR004161 (Translation elongation factor EFTu/EF1A, domain 2), IPR015256 (Initiation factor eIF2 gamma, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54224.1" /db_xref="InterPro:IPR000795" /db_xref="InterPro:IPR004161" /db_xref="InterPro:IPR015256" /db_xref="WormBase:CBN15836" /db_xref="WormBase:WBGene00154561" /translation="MAAEAERDECQSWLAKQDLDKIGVDNLNPLTDEVISRQATINIG TIGHVAHGKSTLVKAFSGVHTVKFKRELERNITIKLGYANAKIYRCSNPECPRPGCYR SAGSSTPDRFPCERPGCGGEFTCVRHVSFVDCPGHDILMATMLNGAAVMDAAFLLVAA NEPCPQPQTSEHLAAVEIMQLKHLMILQNKVDIIKESQARENYEQIAGFVQGTVAENA PVIPISAQLKYNVDLICEYLCKKIPVPVRDFKSPARLIIIRSFDVNKPGSEVENLKGG VAGGTLTKGILRVGQEIEVRPGIVSKTATGQLQCRPIFSRIDSLFAEKNQLEYAVPGG LIGVGTKIDPTLCRGDRLVGHILGAVGTLPDIFIEIEISFYLLRRLLGVRTEGKKKGA KVQKLVKEETLLVNIGSLSTGGRVTAVKGDAAKIRLNDPICTEVGEKIAMSRRFEKSW RLIGWGTIRKGQTVEPIKN" gene <1641391..>1643122 /locus_tag="CAEBREN_32720" /db_xref="WormBase:WBGene00194837" mRNA join(<1641391..1641471,1641521..1641662,1641709..1642300, 1642346..1642474,1642519..1642993,1643048..>1643122) /locus_tag="CAEBREN_32720" /product="hypothetical protein" /db_xref="WormBase:CBN32720" /db_xref="WormBase:WBGene00194837" CDS join(1641391..1641471,1641521..1641662,1641709..1642300, 1642346..1642474,1642519..1642993,1643048..1643122) /locus_tag="CAEBREN_32720" /note="contains similarity to Interpro domain IPR005479 (Carbamoyl phosphate synthetase, large subunit, ATP-binding)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54102.1" /db_xref="InterPro:IPR005479" /db_xref="WormBase:CBN32720" /db_xref="WormBase:WBGene00194837" /translation="MPTPKYIESPNSVQTSLYGYDRNKSIQVNNLRGKPIVVLRSDTV NAVSENRVGGGSRFAKKWIDRSNQMPAPIPSKPMYPSYSHFHHQYSCTKQAPPPPLSL PNSPKLLNEGPPLSFIHSSHDRNRRPPPSPIGRCAPISPKLTPEDEKTVKRWFDKLEV LTSPTTNCSSNSSYTNVSSDITLLELNPKIASKTFVTSSICVPSSEAESSSISSSPSD KGTAFDTPKSLSDSRRTSCSSDISPLITELSVEDDGTSMSCLNEEPVKRGSSHRCPDE VQCTIFRNGICVDDALERKAMLQWYDNLIQWRHDIITKRRFGPPQCHPPPLTVTLIGA SRAQRANSFQRVGDIHPFTMEAMDHVRRKMDAKRSHRLVPAPLPLPAPHEFMANAKCM EPHLFVEYCYQLTAAAYQDTGLTPPHRRPPIPPRIEPIPDQTCKESICSSASEISSDG EYSDDSDDTKQERLRQKMERHRKREHRLQKLFRRRQILDEIDEEDDD" gene complement(<1643869..>1646613) /locus_tag="CAEBREN_25042" /db_xref="WormBase:WBGene00163767" mRNA complement(join(<1643869..1643973,1644022..1644223, 1644269..1644482,1644530..1645898,1645945..1646399, 1646541..>1646613)) /locus_tag="CAEBREN_25042" /product="hypothetical protein" /db_xref="WormBase:CBN25042" /db_xref="WormBase:WBGene00163767" CDS complement(join(1643869..1643973,1644022..1644223, 1644269..1644482,1644530..1645898,1645945..1646399, 1646541..1646613)) /locus_tag="CAEBREN_25042" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR018525 (DNA-dependent ATPase MCM, conserved site), IPR012340 (Nucleic acid-binding, OB-fold), IPR011704 (ATPase, AAA-5), IPR000523 (Magnesium chelatase, ChlI subunit), IPR003593 (ATPase, AAA+ type, core), IPR001208 (DNA-dependent ATPase MCM), IPR008047 (MCM protein 4)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54279.1" /db_xref="InterPro:IPR000523" /db_xref="InterPro:IPR001208" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR008047" /db_xref="InterPro:IPR011704" /db_xref="InterPro:IPR012340" /db_xref="InterPro:IPR018525" /db_xref="WormBase:CBN25042" /db_xref="WormBase:WBGene00163767" /translation="MSRATTPREPQSESADVFAEPASQVSSASALHYGSEMGSMSQMS SASTMRRGGPRGDLGIAAVDHRTVQIQGMADDLAVDDGQPRLYVWGTRICVADVQRSF RDFLTTFKISHLDEDENMMAGNDENLHPIDVNEPYYMERLLECDNAEVTHINLNLAHL QAFSDALYRKVIAYPADVIPYLDIVVNEVFAERFNRTLAQSIELRPFNAVKTRNMRGL DPKDVDQLITISGMVTRTSSLIPEMRIGFFQCTVCAFGIESEVDKGRIEEPVVCTNCS NTHCFQLVHNRSVFLDKQVIKLQESPDDMPSGETPHTVSVYAHGSLVESVQPGDRITV TGIFRATGMKVNPKQRALAAVYRTSIDALHFRKMDTSRLHQDNGETLTEERIQQIIEL SKRPDIMDALSQAIAPSIYEHDDVKRGLLCLLFGGTRKDDETTNKTKLRSEINILLCG DPGTSKSQMLQYVYRLLPRSQYTSGKGSSAVGLTASVSRDADTKQLVLQTGALVLADN GVCCIDEFDKMNDSARSVLHEVMEQQTLSIAKAGIICQLNARASILAAANPIDSKWNK NKTIVENIQLPHTLLSRFDLIFLIVDAQDEMQDRRLGNHLVSLYTDNDGEQEKTEHLD MNLLRDYIAYAKANVHPKLTDDASQFIIEKYIFMRKAGAQHGQITAYPRQLESLVRLS EAHAKIRLSGEVTVEDVDKAFTLWREALRQSAVDPATGRVDVAILASGKSSSGRKAVE HMCEVILKQLQTAKGFVTSKALFQTLKTADKTCSKEIFDEALSELAKKESIARSGERV RFQAADL" gene complement(<1646863..>1647353) /locus_tag="CAEBREN_19539" /db_xref="WormBase:WBGene00158264" mRNA complement(join(<1646863..1647000,1647048..1647195, 1647241..>1647353)) /locus_tag="CAEBREN_19539" /product="hypothetical protein" /db_xref="WormBase:CBN19539" /db_xref="WormBase:WBGene00158264" CDS complement(join(1646863..1647000,1647048..1647195, 1647241..1647353)) /locus_tag="CAEBREN_19539" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54375.1" /db_xref="WormBase:CBN19539" /db_xref="WormBase:WBGene00158264" /translation="MSSMAFDGEAPETDDEIEEEFVEKTIEEDTKADSSSKKPILIDK NLEKRWTQVAIEMINTCQKRSATQEKTMQKVTESAADCFTSMQNVAAKLNVVHTNVTR LEDSIADLLEASQLFPDTFPTFQFDIPQFL" assembly_gap 1651056..1651065 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1656345..>1662062) /locus_tag="CAEBREN_04290" /db_xref="WormBase:WBGene00143015" mRNA complement(join(<1656345..1656601,1661092..1661172, 1661637..1661702,1662035..>1662062)) /locus_tag="CAEBREN_04290" /product="hypothetical protein" /db_xref="WormBase:CBN04290" /db_xref="WormBase:WBGene00143015" CDS complement(join(1656345..1656601,1661092..1661172, 1661637..1661702,1662035..1662062)) /locus_tag="CAEBREN_04290" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54111.1" /db_xref="WormBase:CBN04290" /db_xref="WormBase:WBGene00143015" /translation="MRTGVRSSVGIRHIVSVNCINLTAQVTREDRPSKIRLVPNSAKR QGERVTSILSPNQGSTVAVNVFGTINHPRFKRKSLQSLDHVLRTGGTPISAIVEKWAP LDLVNAFQCQEATGSYPIETLTDQKLKRLRNGIKKAEQSPS" assembly_gap 1662695..1668629 /estimated_length=5935 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1671512..>1671829) /locus_tag="CAEBREN_13153" /db_xref="WormBase:WBGene00151878" mRNA complement(<1671512..>1671829) /locus_tag="CAEBREN_13153" /product="hypothetical protein" /db_xref="WormBase:CBN13153" /db_xref="WormBase:WBGene00151878" CDS complement(1671512..1671829) /locus_tag="CAEBREN_13153" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54167.1" /db_xref="WormBase:CBN13153" /db_xref="WormBase:WBGene00151878" /translation="MAATRSSTRRRKAPNRFHDDESFFPPPPIKRRPKKRSVVEAAAP AHVVLTSTPPPANVKVPGAPKRRYNCEEQECDCFEIEMREWIATRNMKTREEIKTAKK IGE" gene complement(<1673299..>1677993) /locus_tag="CAEBREN_30416" /db_xref="WormBase:WBGene00192381" mRNA complement(join(<1673299..1673403,1673605..1673780, 1673838..1673925,1673985..1674074,1674741..1674892, 1675407..1675536,1675591..1675716,1676636..1676979, 1677027..1677163,1677362..1677487,1677554..1677884, 1677942..>1677993)) /locus_tag="CAEBREN_30416" /product="hypothetical protein" /db_xref="WormBase:CBN30416" /db_xref="WormBase:WBGene00192381" CDS complement(join(1673299..1673403,1673605..1673780, 1673838..1673925,1673985..1674074,1674741..1674892, 1675407..1675536,1675591..1675716,1676636..1676979, 1677027..1677163,1677362..1677487,1677554..1677884, 1677942..1677993)) /locus_tag="CAEBREN_30416" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54287.1" /db_xref="WormBase:CBN30416" /db_xref="WormBase:WBGene00192381" /translation="MPSSVYNSVKSLPSAIPPLWTLKSIRFQTALLISSACVVFGLMR TCFGMAMVDIVRRFAFFHSRNSPGLWDSWPFSRDSGTPGLRTSESPGLRTSGLPRLRT SGPFGPSGLRAGLRKFVEKPGPSRHNGNGTTHSDLHMDWNGEEQARIHTSFYIGAFIA VFPSEFLAKKMGPKNLLSFALILNIIGSILTPFLAFYFKTYLLISAVRMIMGLGYGFM IPAGSVLVSKWFPISEKSTAMAIFTTGNQIGIAVSMFLTAKLCQLHFFEGWPLVFIIY GLIGAIFLIIWHVRVADKPRESKYITATELTYIKGGKQRRSRAETVVRPTPYMKIILN GCVCAICACSFAQSFVLVALVTYLPKYNQIALKMNLTHNGIWSSLPFFIQMITKLLFA VIADKVKQAKVNATSVTKASNAIASFVSAIFIVFAALVPFGSAELVQLSIIISMAAFS AYVPGYNTSIVTVAPQFTAFISSYAQLYAQIASTLAPILIGRITSHDTIEEWKCAFYS LAVVLAVTGIVFQIFGHGRTETWGETPSNAASARISTSLAVCEDGQCKLTLLEKHNHD FRTESKISSDSSSPLKKKISRVSYAGEEIIIPGRIEDLENDVIYSIEEEREE" gene <1681401..>1682478 /locus_tag="CAEBREN_23809" /db_xref="WormBase:WBGene00162534" mRNA join(<1681401..1681571,1681663..1681764,1681807..1681869, 1681918..>1682478) /locus_tag="CAEBREN_23809" /product="hypothetical protein" /db_xref="WormBase:CBN23809" /db_xref="WormBase:WBGene00162534" CDS join(1681401..1681571,1681663..1681764,1681807..1681869, 1681918..1682478) /locus_tag="CAEBREN_23809" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54408.1" /db_xref="WormBase:CBN23809" /db_xref="WormBase:WBGene00162534" /translation="MIRSQSSLTDSEKEARRLSGERWNVSTPPSCLRRLELDISQDVT TAISSPDVRQPMQITEAVLSKSSPLGINESEEPAVSDVPETISSGSQISPRPRRPRSC TTDLWSRFQPVNPKEYSQQSSSSNPSSSSGSWMTDPSFRENYLDASSAMIITPMLTEV LLETHNGTDRYGYSFDGDLNEEGTEDDEEDNKEKSDSGNDEMEKQRDQMTDGCEKKTN LDSEEPSSVHNLETRYAMRERQKDNYFGMIHEDRMELDKMLDDLLEERAPDSGVGFSS EARELLHQESFSFVSETVRKAW" assembly_gap 1684932..1685276 /estimated_length=345 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1688778..1696943 /estimated_length=8166 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1700212..>1702758 /locus_tag="CAEBREN_00351" /db_xref="WormBase:WBGene00139076" mRNA join(<1700212..1700384,1700428..1700538,1700586..1700903, 1700956..1701066,1701116..1701631,1701685..1702651, 1702696..>1702758) /locus_tag="CAEBREN_00351" /product="hypothetical protein" /db_xref="WormBase:CBN00351" /db_xref="WormBase:WBGene00139076" CDS join(1700212..1700384,1700428..1700538,1700586..1700903, 1700956..1701066,1701116..1701631,1701685..1702651, 1702696..1702758) /locus_tag="CAEBREN_00351" /note="contains similarity to Pfam domain PF04435; contains similarity to Interpro domain IPR006570 (SPK)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54322.1" /db_xref="InterPro:IPR006570" /db_xref="PFAM:PF04435" /db_xref="WormBase:CBN00351" /db_xref="WormBase:WBGene00139076" /translation="MSEAFSKRWTTDPDYIDLLNFLIDKTENVKPPMNLLQLAREFKG KNGGAGTVNCLKHRIVTVRTKIHCFEHIDTNTKVKLLFALSSTVNADFLNELNKDAVV KFDDKKRITYYKPNDGNLELRGAHSQPAKRNHGKLIIDYFEKKNNGVPKDEEEKEMGN LIEFITEKCENIDSPLNIRQLSKDFNNHFGISRAFSCIHKKIKRYCHEIQKTEFLDTP SKVKQLFGLSARLDWDYLEKLRKDAVVEVDDLIRIKKYASNNGLLTLHGDHSRSAKYK LAWIESEKKRKTVKNYCNSGDEDEESKKEDGYSEEESDEYSSEEFDSEFYSDYENNYP DEPEDYVKTSKESDDFDDGTPIRNRSPTEISIADNLDFGTPNEKSHRTEEIKMGGDEK NDPGILGNKSVKTRYGRLSKRRHLDSEFSYGLASSRSSEAPASFESASSKPAKQKKIA IEKEQASSSSNQSRSSSKSIRRYSEDSSFPSFSKESGESIENQEDPRAEDNSSDYHSP RIQEIEDYDYNPREDNTPESSSTDNRLGEPELSAAEDPDPNNDTQNTDNRSNAVAPEL HPKKGSLAHQNETNSTPPTNEKEVISQEVPVKVENGEPIKVKDHPEDVKPEIAHNFKI KFFEAMKSLILFLDTPSLSDLKTKIYQKIRKVKRSNGVLQNNELIPALELLIARMANH SVMNISGSVESVSLIQFFCYLKASILNSKMIGVEGLLNKISGLIEKSQNKRISMVKVA NALRATLDVDSF" gene complement(<1703271..>1704107) /locus_tag="CAEBREN_04161" /db_xref="WormBase:WBGene00142886" mRNA complement(join(<1703271..1703333,1703378..1703895, 1703930..>1704107)) /locus_tag="CAEBREN_04161" /product="hypothetical protein" /db_xref="WormBase:CBN04161" /db_xref="WormBase:WBGene00142886" CDS complement(join(1703271..1703333,1703378..1703895, 1703930..1704107)) /locus_tag="CAEBREN_04161" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54401.1" /db_xref="WormBase:CBN04161" /db_xref="WormBase:WBGene00142886" /translation="MENQDVPRDEENPSDYHGPRIQEMDDYDYNPREANTPESHSIDN RLGEPEPSAAEDQIPNVVVPDPELVEETLTPENNKNTSPPTNGEEVISQEVPIKVEHE EPIVVENHTEDVKPVTAHNPKIKFFEAMQSLVLFLDTPSLFSLQSKIDQKIQKMKGSK EVLQNNELIPALELLVARMANHSVIDISGSVKSVSLIQFFCYLKASILNSKMIGVEGL MNNISGLIEKSQNKKIPIKKVTNALRATLDIDDF" assembly_gap 1710598..1716835 /estimated_length=6238 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1723084..>1723853 /locus_tag="CAEBREN_01900" /db_xref="WormBase:WBGene00140625" mRNA join(<1723084..1723746,1723791..>1723853) /locus_tag="CAEBREN_01900" /product="hypothetical protein" /db_xref="WormBase:CBN01900" /db_xref="WormBase:WBGene00140625" CDS join(1723084..1723746,1723791..1723853) /locus_tag="CAEBREN_01900" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54370.1" /db_xref="WormBase:CBN01900" /db_xref="WormBase:WBGene00140625" /translation="MEDQDAPDADGNPSDHRGPRIQETDDHEYNSRADNLPESSPIDN QIQEPKPQATEEHSKNNEVQNTDKRSDTVAPETKPEKKCLTLQNNQNSTTQTNGNEFI SVESHIRFLESLIPMMHTLETPTLEEDQLRIEKTIEKFKSIGNEEEKIRLNEVRTSLM TCLLMIERSAKKEIVKGEDTTSLKEFLLLFHNFLIALKMKELDSFVARVKYMLKELKV NDKNIPTRNIQLALQSIIVIIAP" assembly_gap 1727521..1727968 /estimated_length=448 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1732119..>1732616 /locus_tag="CAEBREN_06741" /db_xref="WormBase:WBGene00145466" mRNA join(<1732119..1732264,1732310..>1732616) /locus_tag="CAEBREN_06741" /product="hypothetical protein" /db_xref="WormBase:CBN06741" /db_xref="WormBase:WBGene00145466" CDS join(1732119..1732264,1732310..1732616) /locus_tag="CAEBREN_06741" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54148.1" /db_xref="WormBase:CBN06741" /db_xref="WormBase:WBGene00145466" /translation="MSIDDNLDFDLSTERSHAPEKFEMREYEEKENDPEIVGNGRIKK RYERLSERRDSDSEDDSDAHPEESDDENGHLDKTQDLMEPSNQADDSDNEAPIRSLAP SGISIDNNFDFDPPSERLHISEETEMREDDEKDDPEITENAAVKTQRS" assembly_gap 1760072..1761693 /estimated_length=1622 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1784248..1784257 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1785354..1793764 /estimated_length=8411 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1795571..1797521 /estimated_length=1951 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1804218..1805359 /estimated_length=1142 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1806656..1812192 /estimated_length=5537 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1813326..1814535 /estimated_length=1210 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1834809..1834818 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1849651..1849946 /estimated_length=296 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1851930..1860820 /estimated_length=8891 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1862443..1862452 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1874781..1886740 /estimated_length=11960 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1887838..1888031 /estimated_length=194 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1889405..1891201 /estimated_length=1797 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1892235..>1893156 /locus_tag="CAEBREN_08572" /db_xref="WormBase:WBGene00147297" mRNA join(<1892235..1893047,1893094..>1893156) /locus_tag="CAEBREN_08572" /product="hypothetical protein" /db_xref="WormBase:CBN08572" /db_xref="WormBase:WBGene00147297" CDS join(1892235..1893047,1893094..1893156) /locus_tag="CAEBREN_08572" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54353.1" /db_xref="WormBase:CBN08572" /db_xref="WormBase:WBGene00147297" /translation="MSSSSSYPKPAKQFPLTERSHVPEVKKRNEGATGFISSKQIGSS SNNSMRLNELDDYDTNYSIEDQVKLEPFRGSIQEDLNEFGEDIQRIPKPHQEPDEHNL IEDPIKVEPEELKIVENPTEDVKPELAQGHDEHKKLIEFPIKLEHEEPVDVKPETSHN SKIRFFEAIQSLILCMDTPSLSEIQSKIHQKIETIGGPNEVILNNEISLIIELLISRM ANHSVVNISKNVESVNFSNFLCYLKAAILNSKMSGVEGLVKNISNRIEESQNKRISIG NVENALLATLDGDGF" gene <1898527..>1900856 /locus_tag="CAEBREN_02844" /db_xref="WormBase:WBGene00141569" mRNA join(<1898527..1898696,1899462..1899812,1899867..1899977, 1900031..>1900856) /locus_tag="CAEBREN_02844" /product="hypothetical protein" /db_xref="WormBase:CBN02844" /db_xref="WormBase:WBGene00141569" CDS join(1898527..1898696,1899462..1899812,1899867..1899977, 1900031..1900856) /locus_tag="CAEBREN_02844" /note="contains similarity to Pfam domain PF04435; contains similarity to Interpro domain IPR006570 (SPK)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54130.1" /db_xref="InterPro:IPR006570" /db_xref="PFAM:PF04435" /db_xref="WormBase:CBN02844" /db_xref="WormBase:WBGene00141569" /translation="MPFNSKHWITDPEYIDLLNYIIDQTKNVESPMSLQRLVREFKEK SGAAQTVKCLKTRLREDGLVEVDEKNRIVYYKANDGSLELRGDHSRTAKIKTSKLESK QSLRSLIINYFENKNNADAVPKNEEERETGNLIEFITEKCDNVNSPLSIGQLTEDFNN RLGTARSFYCIHNRVKGYCREIQTLEFLDTHSKVKQLFCLSATLDSDCLEKLREDALV DVDEKNRITMYTANDNSLTLRGRHWGLGNTNPRRIRKKTVKGVVNKSDNEELDDGSDE YSSEELDSEFDTDDEAGNREMSIEDDFEYDPPSPTTPKSFKRKTDTTGSSSSKRIRPS SNNSMRPNELDDYDTNYSIDDQVKLKPAFGSTQENLNEIEGDEDFQQVLKSPQALDEH DQVEEVTIKIEIDDPKEIKPEIAHNPKIKFFEAMHSLIVCLDTPSLAWIQSKIKEVPS ACRLQPQKGRCLHFRNPAAEETQRKLLRPLKRRSN" assembly_gap 1901350..1901359 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1906616..1922191 /estimated_length=15576 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1926329..1926834 /estimated_length=506 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1935659..1942919 /estimated_length=7261 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1943158..>1945972 /locus_tag="CAEBREN_12207" /db_xref="WormBase:WBGene00150932" mRNA join(<1943158..1943702,1944901..1945077,1945125..1945235, 1945281..1945631,1945679..1945789,1945840..>1945972) /locus_tag="CAEBREN_12207" /product="hypothetical protein" /db_xref="WormBase:CBN12207" /db_xref="WormBase:WBGene00150932" CDS join(1943158..1943702,1944901..1945077,1945125..1945235, 1945281..1945631,1945679..1945789,1945840..1945972) /locus_tag="CAEBREN_12207" /note="contains similarity to Pfam domain PF04435; contains similarity to Interpro domain IPR006570 (SPK)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54323.1" /db_xref="InterPro:IPR006570" /db_xref="PFAM:PF04435" /db_xref="WormBase:CBN12207" /db_xref="WormBase:WBGene00150932" /translation="MKRITKFVSNNSRLTLFGAHSSSAKLRQNGMDDYDTNYSIDDQV KLESFRGSIQENLNEFEEDEDVQQIPKPPQAHDEHNQTEEVPIKIEVEEPIEVKPETS HNSKIKFFEAMQSLILCLDTPSLFWIQSKIYQKIQEIEGPDEVMLNDELVLTIDLLIA RMTNHSVVNLSNNVESVNLSNFEMAPSTSNRWITDPEYFDLLNYLIERAENVKSPMNI QSLAREFKTTSAAVQSVSCLVHRIEALRTWIQSSEHIDKNTKVKLMFALRASVYLNFL GELRKNAFVEVNDEKQITHYKANDGSLELGGDQSQSAKNRTAQVETKRSYRSLIIDYF ENKKNADTSPKTEKQSEMWNLIELITEKCENVNTPLSITRLAKDFIQRFGVSVHLLTI HKRIKVYCREIQTMEFLDTHSKIRQLFGLSATLDSDYIEKLRKVAFVKVDLKNRIIEY ISNDGSLTLRGSHWGFGKNNGPGNT" assembly_gap 1943703..1944702 /estimated_length=1000 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1946238..1947237 /estimated_length=1000 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1953503..>1953917) /locus_tag="CAEBREN_00971" /db_xref="WormBase:WBGene00139696" mRNA complement(join(<1953503..1953534,1953584..>1953917)) /locus_tag="CAEBREN_00971" /product="hypothetical protein" /db_xref="WormBase:CBN00971" /db_xref="WormBase:WBGene00139696" CDS complement(join(1953503..1953534,1953584..1953917)) /locus_tag="CAEBREN_00971" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54337.1" /db_xref="WormBase:CBN00971" /db_xref="WormBase:WBGene00139696" /translation="MLEMEKHEHPESHLMPVSENPVSSETDQAISLDIDEYLAMEITQ RTSLFTEIMNMAPHVANEMRQVVPLHPGGPFMYFATQFGRFRDLKRDGKLENFLQKTE CTCDCGCGADHDAATVIPQ" gene complement(<1954500..>1954730) /locus_tag="CAEBREN_29869" /db_xref="WormBase:WBGene00191834" mRNA complement(<1954500..>1954730) /locus_tag="CAEBREN_29869" /product="hypothetical protein" /db_xref="WormBase:CBN29869" /db_xref="WormBase:WBGene00191834" CDS complement(1954500..1954730) /locus_tag="CAEBREN_29869" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54273.1" /db_xref="WormBase:CBN29869" /db_xref="WormBase:WBGene00191834" /translation="MAMGDKVMRGFSLPEVNPEPSSSQKENDELCAEFETYLQVVQAK ESKGAESSSTRIGHPNCTCKCTCGFMKPDNNN" gene complement(<1955639..>1956321) /locus_tag="CAEBREN_03393" /db_xref="WormBase:WBGene00142118" mRNA complement(join(<1955639..1955707,1955933..1956132, 1956177..>1956321)) /locus_tag="CAEBREN_03393" /product="hypothetical protein" /db_xref="WormBase:CBN03393" /db_xref="WormBase:WBGene00142118" CDS complement(join(1955639..1955707,1955933..1956132, 1956177..1956321)) /locus_tag="CAEBREN_03393" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54309.1" /db_xref="WormBase:CBN03393" /db_xref="WormBase:WBGene00142118" /translation="MARNPKNMTTQQSSQQPPPELNFRFSNRSSTSSGVPSLLDYGDI PQHLAQEHHPIYSAEKTKQNPFTPARFANSIGIQLEIEGYGTRTWLSARAGVMITPDG KMASFQEKEFCQKPNRRINPHGIRKFWSTTPTPSC" gene complement(<1958674..>1960563) /locus_tag="CAEBREN_12531" /db_xref="WormBase:WBGene00151256" mRNA complement(join(<1958674..1959030,1959804..1960028, 1960453..>1960563)) /locus_tag="CAEBREN_12531" /product="hypothetical protein" /db_xref="WormBase:CBN12531" /db_xref="WormBase:WBGene00151256" CDS complement(join(1958674..1959030,1959804..1960028, 1960453..1960563)) /locus_tag="CAEBREN_12531" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR007848 (Methyltransferase small), IPR004557 (Putative methylase), IPR002052 (DNA methylase, N-6 adenine-specific, conserved site), IPR010456 (Ribosomal L11 methyltransferase, PrmA)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54112.1" /db_xref="InterPro:IPR002052" /db_xref="InterPro:IPR004557" /db_xref="InterPro:IPR007848" /db_xref="InterPro:IPR010456" /db_xref="WormBase:CBN12531" /db_xref="WormBase:WBGene00151256" /translation="MSIPTPQYRLQAIRAHDVYEPAEDTFLLIDAIEKDIKEIRSRNP QLVLEIGCGSGVVSTFVNQALGGNVTSVATDLNPHALDVTLETAKLNDIKIDVVRTDL FAGLENLIGKVDVLLFNPPYVPTEEEPRSNIELTYAGGRTGRSTLDRLLPRVPELLSP RGVFYLVALHSNDIPALLKEHSDRMTASVSMERRCGIEHLFILKFVMKESVEAENNTN NTVVVAPLAQPE" gene complement(<1964013..>1966790) /locus_tag="CAEBREN_20730" /db_xref="WormBase:WBGene00159455" mRNA complement(join(<1964013..1964128,1964810..1964873, 1965176..1965304,1966755..>1966790)) /locus_tag="CAEBREN_20730" /product="hypothetical protein" /db_xref="WormBase:CBN20730" /db_xref="WormBase:WBGene00159455" CDS complement(join(1964013..1964128,1964810..1964873, 1965176..1965304,1966755..1966790)) /locus_tag="CAEBREN_20730" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54207.1" /db_xref="WormBase:CBN20730" /db_xref="WormBase:WBGene00159455" /translation="MGLSGPEWLENQNGMGTVEVQTITVAVHNRSPQQPPPTTGLDGQ PGSQTENERPTVAEPLSPSSVFDARGPNLIVEAPPPEPASEPEQRVPQQPEEIIAHQI VNDAMNELFNQE" gene <1969796..>1972840 /locus_tag="CAEBREN_31218" /db_xref="WormBase:WBGene00193183" mRNA <1969796..>1972840 /locus_tag="CAEBREN_31218" /product="hypothetical protein" /db_xref="WormBase:CBN31218" /db_xref="WormBase:WBGene00193183" CDS 1969796..1972840 /locus_tag="CAEBREN_31218" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000477 (Reverse transcriptase), IPR001584 (Integrase, catalytic core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54255.1" /db_xref="InterPro:IPR000477" /db_xref="InterPro:IPR001584" /db_xref="WormBase:CBN31218" /db_xref="WormBase:WBGene00193183" /translation="MYNKNPNEGTTKIDQKEIDILLEKIDLNQSKLSGKTKAEIRKLV SKYPEAFVLSNGKIGKFTGVTTHHIPLLDEHTIPKARPYRMNPEQKEKLEKELHKMQA DEHIEPSSSPYSSPLLIVPKKNGDIRIVIDYRKLNLITRPRTYIMPHTLDVTEEASKG KIFSVFDIASGFHHIRMNEDHKQRTAFCCHLGVFQYRVMPMGLKGSPDTFNQAMEEVK QKYSGSMIVYVDDIVLVSETEEQHVKDLEEFFQLMIKMGLKLKAEKSQIGRTRITFLG FDIENNTIQPNGEKTKAIREFPAPRNITEVKQFLGMCSYFRRFIPGYAILVNPINKLN KKGAEFEWKQEQQEAFEKVKEILMSPPILTTPDMTGTFEMHTDASKIGLSAVLMQKQA DLLKVVAYASRPTTAVESRYPPIELEALAITWGLIHHKPYVFNRKVLVVTDHLPLKSL LHRKEKTMSGRLMRHEAIIQQFDVEIVYRPGKENYVADALSRQRVPDTQTEAVSAIRA SKLSEQKNLWTFQTWKKIQIESCALMKIKEKLLSNRDDKETLKAKKKYLLINDVIHLK PKNNMEIPPVILEGGSETTNKLIMDIHQIESHGGPEKTRATISRFVVWKGMKDEIFRI VTTCQKCQRRKMIPTHQGSVPMGRWEIASGPFQRIHMDVIGPFPETTDGNKYIIAAID SFSRFAVAKATTDQKATTSLQFLIENIVSIHGIPNQVVTDQGRNFTSKMFQEVSKLLE LDHIQTPSYHHESNGVIERLNRTLEEMLTCSTKKPENFSDWDKKLPIVIHAYNSRIHK ATGLAPEKIIFGRHTSSPLNLYVEVVQPQYHDQKDYADSLAEIISDFIETAREKSEVS RESYKTFYDKRHNVRDTNFQVGEKVLIQDFTAGKLEYQFSPPATVLKTTETTVTVRNH KNKVETIHKNRVKRHITLESIMKKQKDQQAAQNNDMEGQADETIVGQGMRGKPEGDEK MDSGVGSRRFVRRSRLHHESIRRSRRLQGLQPMADTLSQFPI" gene complement(<1976716..>1981127) /locus_tag="CAEBREN_13260" /db_xref="WormBase:WBGene00151985" mRNA complement(join(<1976716..1976748,1976936..1977168, 1977542..1977683,1978118..1978363,1978549..1978670, 1978851..1978947,1979215..1979298,1979527..1979675, 1979954..1980025,1980073..1980172,1980632..1980734, 1980883..1980992,1981044..>1981127)) /locus_tag="CAEBREN_13260" /product="hypothetical protein" /db_xref="WormBase:CBN13260" /db_xref="WormBase:WBGene00151985" CDS complement(join(1976716..1976748,1976936..1977168, 1977542..1977683,1978118..1978363,1978549..1978670, 1978851..1978947,1979215..1979298,1979527..1979675, 1979954..1980025,1980073..1980172,1980632..1980734, 1980883..1980992,1981044..1981127)) /locus_tag="CAEBREN_13260" /note="contains similarity to Pfam domain PF09746; contains similarity to Interpro domain IPR019144 (Membralin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54221.1" /db_xref="InterPro:IPR019144" /db_xref="PFAM:PF09746" /db_xref="WormBase:CBN13260" /db_xref="WormBase:WBGene00151985" /translation="MSENAENQNFREPAEEILAQIQEQANTRVESPPQPGEPANPPIP RAPPPGHTHAPPQNNSLNAARDRLFHAMLVRVALKYSGKVNLRWRQIIEGTLLFVAFV LLASLVFIHYNFQRSPGTCLHEMRAEDVKKGIVRIEVVRNLDVLYRKERYVRDFVKAF SGRVCLFNPADVFRFGPSAIPYSAKERKAYLAELERRRSGKTNDETIRYSFYSNLLAY MVKPMFWEDEESELFSTTKTFDSTDELEFHDPIEVEAHNSFFEKIKDSDIPEPHEYEY MFRVEYAMLYGVLRLPPDFRDDHGIPTTQIRIDSKSKCFGDQMSRLMMKLFVGYEDTI IAALRARAHNLSLVHPETLSMGYLHNLQTHEHFHFVSNSMGRASFLTAGLLMIIFTFA ISMLLRFSHHQIFVFIIDLLHMFELQQPLNPPVAPLITVVLALVGMEAIMAEVFNDTS IAFYVILIVWVADQYDAICCHSTTSKKFWLRFFYIYQFFFYSYQYRFSGQYGGLALST SALFILLKILQKTEKN" gene <1986080..>1993360 /locus_tag="CAEBREN_01927" /db_xref="WormBase:WBGene00140652" mRNA join(<1986080..1986189,1989346..1989591,1989760..1989871, 1989918..1990019,1990539..1990760,1990934..1991027, 1991388..1991465,1992034..1992161,1992211..1992295, 1992351..1992485,1993296..>1993360) /locus_tag="CAEBREN_01927" /product="hypothetical protein" /db_xref="WormBase:CBN01927" /db_xref="WormBase:WBGene00140652" CDS join(1986080..1986189,1989346..1989591,1989760..1989871, 1989918..1990019,1990539..1990760,1990934..1991027, 1991388..1991465,1992034..1992161,1992211..1992295, 1992351..1992485,1993296..1993360) /locus_tag="CAEBREN_01927" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003146 (Proteinase inhibitor, carboxypeptidase propeptide), IPR000834 (Peptidase M14, carboxypeptidase A)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54339.1" /db_xref="InterPro:IPR000834" /db_xref="InterPro:IPR003146" /db_xref="WormBase:CBN01927" /db_xref="WormBase:WBGene00140652" /translation="MWLLNLATFTLITWQVTCHAINQHTGDGGEKRADYSGYTLHRFR VDTTSNTMEKLESYDMELDQNTQTARLLIDIWAEPSKQNPYADILVAPEFLEKFKSLL TASEISTLKMIEGDIQSQINAERNAMFRNSIRRRKRALSSWKDFDVNSYHSYEEMVEF MRLLSEQRADMVEMVKVATSSEGRSIYGVKIHPPGGSPPEKPSIIVDAGVHAREWIAP AVGLFMIKKIVAEYGRNPQVTANLEKFDWYIMPQVNPDGYEYSRTSDRLWRKTRSKNT TVNRWCVGADANRNWGYRWGEAGANRTPCSNIYMGSHPYSEPEIKGLKEYFTWQITNP MVYISLHSYGQLLLSPWGYTNERTENYQDQQNAAKEAAMAIKNTTGVSYSYGTISEMM YPASGTSIDFMQHRGVPYIYGVELRPTDNPNSFAFNLPPSFIRATGDEMMAALNAIGT HAVKVKRL" gene complement(<1993710..>1994638) /locus_tag="CAEBREN_17373" /db_xref="WormBase:WBGene00156098" mRNA complement(join(<1993710..1993877,1994522..>1994638)) /locus_tag="CAEBREN_17373" /product="hypothetical protein" /db_xref="WormBase:CBN17373" /db_xref="WormBase:WBGene00156098" CDS complement(join(1993710..1993877,1994522..1994638)) /locus_tag="CAEBREN_17373" /note="contains similarity to Interpro domain IPR007512 (Protein of unknown function DUF543)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54254.1" /db_xref="InterPro:IPR007512" /db_xref="WormBase:CBN17373" /db_xref="WormBase:WBGene00156098" /translation="MPRSEDEVGQKIDRCFADSLLKVTGGVAIGIVASVAFFKSRSWP IWFGSGVGLGTGWSNCRHDFASPYVLHGKKVPAGQDTQGKPAFNIVEQKQ" gene complement(<1995117..>1998354) /locus_tag="CAEBREN_11026" /db_xref="WormBase:WBGene00149751" mRNA complement(join(<1995117..1995281,1995733..1996030, 1996083..1996255,1996824..1997027,1997087..1997227, 1997449..1997518,1997563..1997715,1998104..1998183, 1998236..1998276,1998324..>1998354)) /locus_tag="CAEBREN_11026" /product="hypothetical protein" /db_xref="WormBase:CBN11026" /db_xref="WormBase:WBGene00149751" CDS complement(join(1995117..1995281,1995733..1996030, 1996083..1996255,1996824..1997027,1997087..1997227, 1997449..1997518,1997563..1997715,1998104..1998183, 1998236..1998276,1998324..1998354)) /locus_tag="CAEBREN_11026" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54156.1" /db_xref="WormBase:CBN11026" /db_xref="WormBase:WBGene00149751" /translation="MHNNQYSRGYGYNEQSTSSSSSSRSSDRIHDRFNSWHKEPEWSG RDESWRGNSRPVAPPDRGRNDSWKTASASPTTLGFQLGRDRAPMPVDDQFLIRYGAKR LSNGNLVDRDGYTLRTRDPNCRAPSPPAFNPGREMRRNGDNGRDRGGPPSPNRSSGGS WERMRPDEDLEKKARQQIEMMEKLEEESKKAAEKRMIEKRKAKEKEKRKEKDGEDEWE EPEGQDEYEDVIEEPPEKKEAKNIPPFTKSPLLPNPPPFLSGGPRFNGPTYQKAKPAP RPDSWFSQYKKNVEAFKEQLYRAPPVPPPAAPGYYPNDRHSTLSGSSPAFPRTSASPS TSSPYPAQPRRQMDLPPPGVVEFDPVYSKRSPRYTGVDHGRIATASTSSAYPMAVNAF GVYIGNQNPPSTSSQPRPTPAIPPSTNRRDSPSSDSGSGSEDEAIRKLREIIKNYGSR T" gene complement(<2001491..>2002527) /locus_tag="CAEBREN_32743" /db_xref="WormBase:WBGene00194900" mRNA complement(join(<2001491..2001768,2001812..2001962, 2002012..2002387,2002433..>2002527)) /locus_tag="CAEBREN_32743" /product="hypothetical protein" /db_xref="WormBase:CBN32743" /db_xref="WormBase:WBGene00194900" CDS complement(join(2001491..2001768,2001812..2001962, 2002012..2002387,2002433..2002527)) /locus_tag="CAEBREN_32743" /note="contains similarity to Pfam domain PF00651; contains similarity to Interpro domains IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54372.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR013069" /db_xref="PFAM:PF00651" /db_xref="WormBase:CBN32743" /db_xref="WormBase:WBGene00194900" /translation="MTDQPITHKSEKKLVPGTNGVLETTEKNGIKCVWSRNFIYHPDV HLFELRFSWSFDWNELKKSGVSGLSGHITVTSNYIPSFSRKIDIDLTENPQVIETTIN PVNFDYNYTIAFEYHLLPYRLQIREEISYDDMFLPSELNDTILVIDDKRLHVNRVFLS YHSEFFRTLFSSKFKEGQMDEIPIKDVSYEDFGLLMSTIYPETVYPNDKTVEKLLELA DRFLIPSVIRHVEFHLLRDSRINSEKLIWMADEYGMPKLLEKCMDELNTVEKVKKLHD SPEYKKLSQGTKVQIFDILMKMI" assembly_gap 2002580..2003579 /estimated_length=1000 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<2003689..>2004723) /locus_tag="CAEBREN_32742" /db_xref="WormBase:WBGene00194899" mRNA complement(join(<2003689..2003966,2004011..2004161, 2004211..2004586,2004629..>2004723)) /locus_tag="CAEBREN_32742" /product="hypothetical protein" /db_xref="WormBase:CBN32742" /db_xref="WormBase:WBGene00194899" CDS complement(join(2003689..2003966,2004011..2004161, 2004211..2004586,2004629..2004723)) /locus_tag="CAEBREN_32742" /note="contains similarity to Pfam domain PF00651; contains similarity to Interpro domains IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54351.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR013069" /db_xref="PFAM:PF00651" /db_xref="WormBase:CBN32742" /db_xref="WormBase:WBGene00194899" /translation="MTDQPLTHKSEKKQSTQTLAVLETTNKNGIKCVWSGNCIIVQNA NSNKLRFSWNFDWNELEKTGIDGLSGQITVTSPEAYFAPRKIEVNLTANPQIIETTIE NLPSYSTNYSIFEYELFPNRSQNQEEVSYDELFLSSELNDTILVIDEKRLHVNKVFLS YHSEFFRTLFSSKFKEGQMDEIPIKDVSYEDFGLLMSTIYPKAVHPNDKTVEKLLELA DRFLIPFVIGHVEYHLLNNSRINSEKMIWMADKYGMTKLFEKTMRELDTVVKAKKLQT SPEYKKLSNDAKAAILDRLIKLI" gene complement(<2005158..>2006136) /locus_tag="CAEBREN_28480" /db_xref="WormBase:WBGene00190445" mRNA complement(join(<2005158..2005435,2005479..2005999, 2006042..>2006136)) /locus_tag="CAEBREN_28480" /product="hypothetical protein" /db_xref="WormBase:CBN28480" /db_xref="WormBase:WBGene00190445" CDS complement(join(2005158..2005435,2005479..2005999, 2006042..2006136)) /locus_tag="CAEBREN_28480" /note="contains similarity to Pfam domain PF00651; contains similarity to Interpro domains IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54262.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR013069" /db_xref="PFAM:PF00651" /db_xref="WormBase:CBN28480" /db_xref="WormBase:WBGene00190445" /translation="MTDQPITHKSVRAQIPQAGAVLETTNKNGIKCEWRGGNNYLQNL RDDHFSWCFDWSELRQNGVDGLSGYIMVAAENNPSFSRKIDVNLTENPQVIETTVEAA PNSLFGNRFMYEYHLLPYFNQEEEVSYDELFLPSELNDTILVIDEKRLHVNRAFLSIH SDFFRALFSSKFKEGHMDEIPIEDVSYADFGLLMSTIYPKTVFPNDKTVEKLLELADR FLIPSVIGHVEYHLLHNSRINSEKIIWMADKYGMTKLFKKCLDELNTNEKAKKLHTSP EYKKLSKDAKAEILDVVMKMI" gene <2010335..>2011681 /locus_tag="CAEBREN_08930" /db_xref="WormBase:WBGene00147655" mRNA join(<2010335..2010408,2010687..2011484,2011555..>2011681) /locus_tag="CAEBREN_08930" /product="hypothetical protein" /db_xref="WormBase:CBN08930" /db_xref="WormBase:WBGene00147655" CDS join(2010335..2010408,2010687..2011484,2011555..2011681) /locus_tag="CAEBREN_08930" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54334.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN08930" /db_xref="WormBase:WBGene00147655" /translation="MVFPVLNLPAVPLGQVLKGLTSSELFEMHQCSLKTGHTLRQFEK QNKTIKATVDFQRSFVDVRGVRKYQVCTPEESREALPEKTRAFDGQEVPTGEAGENTF NTFWPEGEKVEGAKKVTNELIRSLGLGQLDSVLISEENPAQEVLEWVQNSGVKMENFN LIGTAPEHRDALADLVYSEEFFRKVSMNYTSLLEVSPEFSPKNFKTDTHCITLFKLFL HHSYWFTIDHMMVFNTGAIILYHSKLSSADLNKYLTLWKEGNYTRVMYLSIHLAEGHT FDFRQITAGLIEPEKIRVEENNEVIELKRNDKIGELTLNPAKNELTFFVDDVPKAE" gene complement(<2013302..>2014627) /locus_tag="CAEBREN_14686" /db_xref="WormBase:WBGene00153411" mRNA complement(join(<2013302..2013428,2013499..2014296, 2014554..>2014627)) /locus_tag="CAEBREN_14686" /product="hypothetical protein" /db_xref="WormBase:CBN14686" /db_xref="WormBase:WBGene00153411" CDS complement(join(2013302..2013428,2013499..2014296, 2014554..2014627)) /locus_tag="CAEBREN_14686" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54388.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN14686" /db_xref="WormBase:WBGene00153411" /translation="MVFPVLNLPAVPLGQVLKGLTSSELFEMHQCSLKTGHTLRQFEK QNKTIKATVDFQRSFVDVRGVRKYQVCTPEESREALPEQTRTFDGQKVPTGEAGENTF NTFWPEGEKVEGAKKVTNELIRSLGLGQLDSVLISEENPAQEVLEWVQNSGVKMENFN LIGTAPEHRDALADLVYSEEFFRKVSMNYTSLLEVSPEFSPKNFKTDTHCITLFKLFL HHSHWFTIDHMMVFNTGAIILYHSKLSSADLNKYLTLWKEGNYTRVMYLSIHLAEGHT FDFRQITAGLVEPEKIRVEENNEVIELKRNDKIGELTLNPAKNELTFFVDDVPKAE" gene complement(<2023714..>2029051) /locus_tag="CAEBREN_32751" /db_xref="WormBase:WBGene00194942" mRNA complement(join(<2023714..2024476,2024523..2025311, 2025361..2026482,2026532..2027344,2027457..2028697, 2028789..2028869,2028959..>2029051)) /locus_tag="CAEBREN_32751" /product="hypothetical protein" /db_xref="WormBase:CBN32751" /db_xref="WormBase:WBGene00194942" CDS complement(join(2023714..2024476,2024523..2025311, 2025361..2026482,2026532..2027344,2027457..2028697, 2028789..2028869,2028959..2029051)) /locus_tag="CAEBREN_32751" /note="contains similarity to Pfam domain PF05970; contains similarity to Interpro domain IPR010285 (DNA helicase PIF1, ATP-dependent)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54381.1" /db_xref="InterPro:IPR010285" /db_xref="PFAM:PF05970" /db_xref="WormBase:CBN32751" /db_xref="WormBase:WBGene00194942" /translation="MVKSTPKQPPSTLSSWTGRLRTRTVKTNSQQAMTTSSRPDSIPV ERRRPDAEKSTERQVVAPSNTPKANPVKRSEHARLTAKKTAEALRKALNRLHESEDVK KKRKTVNAARTAKTRSEETANDRRRRLSLNKAQTSRARAKETDEVTAARRASNAASTS RSRAKESDEAAAARRSSNQCRTARARSKESDECATARRALDAANKSRARSEESDTVKA ERQKQDAHRKAITRSQESQETSDARRSADRQRHAAPTNQQQYLGLAKRDAPVKEHYLG QMSTQCSSCKALHYQGELPQSKEFNTCCRHGLVDLPMFENFPPELQDLYVGSTPEANE FRKNCRSYNNSLAMGCTKAKLDVPKGGPYSFRIHGQVYHLIGPLHPAEGEEHVFAQVF ILDTEEAADELANRKVNRTCSKEVFKLLIDILEKYNPFVKSFKMMREKEEEEEMMAKA QNRELKEVKMVFRQGKKFDPNRYQIPTANEVAVVFVGDEYQIPGRREITVYQRSTGKL QNLLDIDKETDPLCYPLLFVDGRYGWHLGRKRRKESGDGEEKMSTREFYSYYLHVRPQ FSPLFYAKKLFQQYCVDVWTKIEHERLNFILKNQKQLRVESLHGLMEHVSGEEGGPCG QRIFLPSSFSGSPRDMVAQFQDALAIVSKFGKPDLFITLTSNPHWKEIEEALISGQSA IDRPDIIARVFKLKVDEVKKDIFVRKVYGEVAAWVYVVEFQKRGLPHIHMLIILKDKW KLKTAADIDSIISAELPDKDEDPELFELVSTMMLHRPCGAYNPEASCMVNGVCTKRYP KEFCEVTTVGADGFTKYRRRNDGRTVRVKLANGDFVDLDNRSVVPYNKYMIRKYRCHG NVERCGHVGAAKYLFKYVYKGHTRAAVRIFTDSSGAKHQQENEIDSYLDTRYLCAPEA LHRIYGFKMSDRSTPVMQLKVHVKDAQGVVFQAGQEKNALESAKMRKTTLTAWFAANQ RCAEELQNNGMIPADIVDSRGIHYIDMPEHFQFVKGEWVHRRQATKSIGRMHFVSPRE QERFALRLMLLNTVDATSYENLLTVDGHQYENFVEAAKAAGYLTDDSFYEKSLEEATT FQTGSQFRSFFATLLLFGEIHNAEILWNKFRNEFSEDFSLHYPQQMAETLAYNDLIDR MNAMGENLEKWMKLDYDRVTPEDFVDYDFCRQEGQRMREKLSAEQEEIVRAALEALEQ GGGLMYVDGPGGSGKTFVYNCLIHILNGMQKKVASLAWVGIASALLPNGRTVASYFHL NVKDGCKSSSLHLQSAEAKKLAELDGLVWDEAPMSPKAALETVDQVLQDVTGIKKPFG GKLMILGGDFRQCLPVVHRGGIEEQVANSIKKSEKLWPLFKTYRLTRNLRVSDGNEEW KQFLLDVGDGKLGEGPSGLMDVPPELRSQGNLAEEMFGSLLRSQADASDISRVAILTP TNKGALEMNEKVFNMIPGNYRMYDSVDEVGEKEESSDATNFPTEFLNKMSPAGLPPHR LKLKIGAIVMLIRNLDVRNGLCNGSRMVVKQMGERVLGCELITGPRKGEAVLVPRITL TYDTDIPFVLKRNQFPIRPACAMTVNKAQGQTFDRIGVLLDNPIFSHGQLYVALSRTR TKEGVRISAPDNVMNNIVFRNIL" gene <2035748..>2036601 /locus_tag="CAEBREN_06759" /db_xref="WormBase:WBGene00145484" mRNA join(<2035748..2035894,2036290..>2036601) /locus_tag="CAEBREN_06759" /product="hypothetical protein" /db_xref="WormBase:CBN06759" /db_xref="WormBase:WBGene00145484" CDS join(2035748..2035894,2036290..2036601) /locus_tag="CAEBREN_06759" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54285.1" /db_xref="WormBase:CBN06759" /db_xref="WormBase:WBGene00145484" /translation="MTMEQWRKAEQLRIYEVKVSREIECFQHFSHVEIMVKQVDYAYL MEWKEKFLEHRHLQSVKLHPSWTVNQDKFKEIFGDYPEPTYANFVAAYCLIEVPDSEE VIRITWYYRYSSVFVFQRMKSSDILPFDNYETFERKRQEGCPDLMPFQLN" gene complement(<2037665..>2038324) /locus_tag="CAEBREN_01343" /db_xref="WormBase:WBGene00140068" mRNA complement(<2037665..>2038324) /locus_tag="CAEBREN_01343" /product="hypothetical protein" /db_xref="WormBase:CBN01343" /db_xref="WormBase:WBGene00140068" CDS complement(2037665..2038324) /locus_tag="CAEBREN_01343" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54205.1" /db_xref="WormBase:CBN01343" /db_xref="WormBase:WBGene00140068" /translation="MEKLLPQFTRPWDFVEVQDPKLVLKITGRNTRGLRGIYDGDIGF YGSKIRRSNSRRTRLLKEVPAGVARSGAGELLVRVYFRRELKESGTIGYSNKFFQFET FFRGSRSSRLNFLMQGSSDLIIEAHATPEGFKILYADATSRKPDQRGVLNFWRTAKMP DNTPIDQTNIEEEYLRELRRECNNRMKKLGKELAQLKKAQEEVQERRKALHQSWLTLK D" assembly_gap 2046909..2047908 /estimated_length=1000 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<2052473..>2052681) /locus_tag="CAEBREN_18654" /db_xref="WormBase:WBGene00157379" mRNA complement(join(<2052473..2052567,2052615..>2052681)) /locus_tag="CAEBREN_18654" /product="hypothetical protein" /db_xref="WormBase:CBN18654" /db_xref="WormBase:WBGene00157379" CDS complement(join(2052473..2052567,2052615..2052681)) /locus_tag="CAEBREN_18654" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54327.1" /db_xref="WormBase:CBN18654" /db_xref="WormBase:WBGene00157379" /translation="MIPYYPDNLQGSKQSRDFDVYFVSSKAVTLPTCRIRDTATGNQK FMKDNYGVK" gene <2064818..>2067950 /gene="Cbn-cye-1" /locus_tag="CAEBREN_12969" /db_xref="WormBase:WBGene00151694" mRNA join(<2064818..2064888,2064963..2065083,2066158..2066790, 2066896..2067069,2067458..2067814,2067939..>2067950) /gene="Cbn-cye-1" /locus_tag="CAEBREN_12969" /product="CBN-CYE-1 protein" /db_xref="WormBase:WBGene00151694" CDS join(2064818..2064888,2064963..2065083,2066158..2066790, 2066896..2067069,2067458..2067814,2067939..2067950) /gene="Cbn-cye-1" /locus_tag="CAEBREN_12969" /note="contains similarity to Pfam domain PF00134; contains similarity to Interpro domains IPR006670 (Cyclin), IPR013763 (Cyclin-related), IPR006671 (Cyclin, N-terminal)" /codon_start=1 /product="CBN-CYE-1 protein" /protein_id="EGT54133.1" /db_xref="InterPro:IPR006670" /db_xref="InterPro:IPR006671" /db_xref="InterPro:IPR013763" /db_xref="PFAM:PF00134" /db_xref="WormBase:CBN12969" /db_xref="WormBase:WBGene00151694" /translation="MDNSPEWTSDYGEDLHKKDNSTILLSHEEFSESTPDTTMETKEN ISDSSTESYQLGYRKRGSGQKRSSGKRLSEENDTTFNGSSLGHLAESEKSYEVITGEE MEEDYDEEDSDYRIDDVDLEQSSDRSSDGPEEDQEVVIDPELLKLPLKNETIEMAKRL MNSDNMIPAPPLLTGPKCQGIGSPTKVWSLMVKKDDIPRATRFLLDQHPDMTVPMRQT LLVWMMDVCEAEKLHRETFHLAVDYVDRYLESAMEEVHAGNFQLIGTAALFIAAKYEE IYPPKCAEFAYYTSGMFDSENVRQMEILMVKGIDWNFGPITCIQWLSTYLQLLGTGEE DNDSKGNMYIPKLLRFQFIEMCQILDYLLFEIDSFRFSYRTIAAAVLFVHYGIINDVE KATGFKKDQIQEVIEYVEPVCRVFRKREELTIIPYFEGIEPEDLHNIQVSMKLEEIKL LVEEE" gene 2066034..2066105 /locus_tag="CAEBREN_27622" /pseudo /db_xref="WormBase:WBGene00188233" tRNA 2066034..2066105 /locus_tag="CAEBREN_27622" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN27622" /db_xref="WormBase:WBGene00188233" gene <2071801..>2072049 /locus_tag="CAEBREN_15707" /db_xref="WormBase:WBGene00154432" mRNA <2071801..>2072049 /locus_tag="CAEBREN_15707" /product="hypothetical protein" /db_xref="WormBase:CBN15707" /db_xref="WormBase:WBGene00154432" CDS 2071801..2072049 /locus_tag="CAEBREN_15707" /codon_start=1 /product="hypothetical protein" /protein_id="EGT54216.1" /db_xref="WormBase:CBN15707" /db_xref="WormBase:WBGene00154432" /translation="MYNYRAKSSNKRRKSLNPHCLSSFYRQLEQHSIRNGVRPVVDPK VYPLDSDTESTGATGEPSNKRARQDHDNTYDGSDDSMA" CONTIG join(ABEG02000359.1:1..45372,gap(1269),ABEG02000360.1:1..36970, gap(521),ABEG02000361.1:1..40409,gap(274),ABEG02000362.1:1..25785, gap(10),ABEG02000363.1:1..3681,gap(629),ABEG02000364.1:1..35567, gap(10),ABEG02000365.1:1..26841,gap(10),ABEG02000366.1:1..71702, gap(259),ABEG02000367.1:1..23177,gap(105),ABEG02000368.1:1..5271, gap(10),ABEG02000369.1:1..7442,gap(10),ABEG02000370.1:1..7433, gap(996),ABEG02000371.1:1..88176,gap(547),ABEG02000372.1:1..1833, gap(4698),ABEG02000373.1:1..42862,gap(10),ABEG02000374.1:1..68593, gap(10),ABEG02000375.1:1..71948,gap(10),ABEG02000376.1:1..30643, gap(385),ABEG02000377.1:1..20719,gap(283),ABEG02000378.1:1..2845, gap(10),ABEG02000379.1:1..2950,gap(2263),ABEG02000380.1:1..7451, gap(10),ABEG02000381.1:1..4050,gap(45),ABEG02000382.1:1..6156, gap(188),ABEG02000383.1:1..42557,gap(10),ABEG02000384.1:1..14912, gap(478),ABEG02000385.1:1..4740,gap(517),ABEG02000386.1:1..21937, gap(10),ABEG02000387.1:1..49126,gap(10),ABEG02000388.1:1..3481, gap(112),ABEG02000389.1:1..7148,gap(130),ABEG02000390.1:1..54613, gap(161),ABEG02000391.1:1..1933,gap(10),ABEG02000392.1:1..82423, gap(10),ABEG02000393.1:1..13942,gap(7382),ABEG02000394.1:1..20749, gap(289),ABEG02000395.1:1..39908,gap(10),ABEG02000396.1:1..48722, gap(13),ABEG02000397.1:1..26468,gap(381),ABEG02000398.1:1..2732, gap(10),ABEG02000399.1:1..3207,gap(5206),ABEG02000400.1:1..9967, gap(223),ABEG02000401.1:1..9167,gap(7591),ABEG02000402.1:1..9257, gap(1265),ABEG02000403.1:1..67435,gap(6732), ABEG02000404.1:1..75245,gap(10),ABEG02000405.1:1..47478,gap(10), ABEG02000406.1:1..17396,gap(276),ABEG02000407.1:1..17452,gap(7806), ABEG02000408.1:1..29516,gap(3069),ABEG02000409.1:1..74894, gap(27329),ABEG02000410.1:1..24824,gap(10),ABEG02000411.1:1..15908, gap(10),ABEG02000412.1:1..18910,gap(10),ABEG02000413.1:1..6915, gap(444),ABEG02000414.1:1..28131,gap(10),ABEG02000415.1:1..11629, gap(5935),ABEG02000416.1:1..16302,gap(345),ABEG02000417.1:1..3501, gap(8166),ABEG02000418.1:1..13654,gap(6238), ABEG02000419.1:1..10685,gap(448),ABEG02000420.1:1..32103,gap(1622), ABEG02000421.1:1..22554,gap(10),ABEG02000422.1:1..1096,gap(8411), ABEG02000423.1:1..1806,gap(1951),ABEG02000424.1:1..6696,gap(1142), ABEG02000425.1:1..1296,gap(5537),ABEG02000426.1:1..1133,gap(1210), ABEG02000427.1:1..20273,gap(10),ABEG02000428.1:1..14832,gap(296), ABEG02000429.1:1..1983,gap(8891),ABEG02000430.1:1..1622,gap(10), ABEG02000431.1:1..12328,gap(11960),ABEG02000432.1:1..1097,gap(194), ABEG02000433.1:1..1373,gap(1797),ABEG02000434.1:1..10148,gap(10), ABEG02000435.1:1..5256,gap(15576),ABEG02000436.1:1..4137,gap(506), ABEG02000437.1:1..8824,gap(7261),ABEG02000438.1:1..783,gap(1000), ABEG02000439.1:1..1535,gap(1000),ABEG02000440.1:1..55342,gap(1000), ABEG02000441.1:1..43329,gap(1000),ABEG02000442.1:1..24361) //