LOCUS GL379789 1891389 bp DNA linear CON 13-MAR-2015 DEFINITION Caenorhabditis brenneri unplaced genomic scaffold Scfld02_3, whole genome shotgun sequence. ACCESSION GL379789 ABEG02000000 VERSION GL379789.1 DBLINK BioProject: PRJNA20035 BioSample: SAMN02953693 KEYWORDS WGS. SOURCE Caenorhabditis brenneri ORGANISM Caenorhabditis brenneri Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 1891389) AUTHORS Wilson,R.K. CONSRTM The Caenorhabditis brenneri Sequencing and Analysis Consortium TITLE Direct Submission JOURNAL Submitted (21-JUL-2010) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA REFERENCE 2 (bases 1 to 1891389) CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (28-JUL-2011) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA REMARK Annotation update by submitter COMMENT The organism is Caenorhabditis brenneri Sudhaus & Kiontke, 2007; strain PB2801. This strain is derived from the wild isolate LKC28. It was inbred in Scott Baird's laboratory for 20 generations by transferring one gravid female per generation. The strain LKC28 was established from worms collected by Hernan Ruiz in 2003 from roots of Liriope (Convallariaceae) grown in a nursery in Costa Rica (Provinciade Alajuela) (Sudhaus & Kiontke 2007). LKC28 and three other strains of C. brenneri were described in Sudhaus & Kiontke, 2007. Annotation was added to the scaffolds in July 2011. ##Genome-Assembly-Data-START## Assembly Method :: PCAP v. 9/3/04 Assembly Name :: C_brenneri-6.0.1 Genome Coverage :: 9.5x Sequencing Technology :: ABI ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..1891389 /organism="Caenorhabditis brenneri" /mol_type="genomic DNA" /submitter_seqid="Scfld02_3" /strain="PB2801" /db_xref="taxon:135651" /chromosome="Unknown" gene complement(<5..>1369) /locus_tag="CAEBREN_00972" /db_xref="WormBase:WBGene00139697" mRNA complement(join(<5..145,546..669,1278..>1369)) /locus_tag="CAEBREN_00972" /product="hypothetical protein" /db_xref="WormBase:CBN00972" /db_xref="WormBase:WBGene00139697" CDS complement(join(5..145,546..669,1278..1369)) /locus_tag="CAEBREN_00972" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45687.1" /db_xref="WormBase:CBN00972" /db_xref="WormBase:WBGene00139697" /translation="MTDTLEDGYDKLPELKYDSMSIKELIGEARRTAPAMTAHDESFE RLKEVIETRKKEHLLKATKENDDTMDIMGPFNVPHHDQRAARTLSTTAGLRVEEICEF WGGWGRRLKILDNFVF" assembly_gap 1937..2763 /estimated_length=827 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<4109..>6340) /locus_tag="CAEBREN_25726" /db_xref="WormBase:WBGene00164451" mRNA complement(join(<4109..4177,4750..4882,5851..6017, 6167..>6340)) /locus_tag="CAEBREN_25726" /product="hypothetical protein" /db_xref="WormBase:CBN25726" /db_xref="WormBase:WBGene00164451" CDS complement(join(4109..4177,4750..4882,5851..6017, 6167..6340)) /locus_tag="CAEBREN_25726" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45598.1" /db_xref="WormBase:CBN25726" /db_xref="WormBase:WBGene00164451" /translation="MTKPFADLIGKPEDQPKCPCEAQAQLTTISVKMNTANERIRRAL PRVLKHYESRINSYRRQIILVMYVILVVNSWGTIVTLPWLNPVFPYTIVLMSYFAALA LNIRMWKKWGFRAAKIDAAGELGAVEEQIVVHEEVVRTRKELVKGIKVKRAEIRILIR SEEQRPSGLSRERVVEAFEH" assembly_gap 10827..10836 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<19029..>20317) /locus_tag="CAEBREN_10622" /db_xref="WormBase:WBGene00149347" mRNA complement(join(<19029..19186,19287..20194,20247..>20317)) /locus_tag="CAEBREN_10622" /product="hypothetical protein" /db_xref="WormBase:CBN10622" /db_xref="WormBase:WBGene00149347" CDS complement(join(19029..19186,19287..20194,20247..20317)) /locus_tag="CAEBREN_10622" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45764.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN10622" /db_xref="WormBase:WBGene00149347" /translation="MIPLLRLPKPALNIVLRNMTTMNQFILSLHYKCFKSQMKCLTTG PNPKFNIVVREVFYMYITGPDYSDLDFIFYKENENGSFSRGEGEPKRTFTENDPLTVR SILDKRGLRIIAQKSARQWISLIMEVFNLKKIERLHYQTDDYCFESVREMLKGIPLEF LEVTGDEPLRNYKEVLRAVPPCSHLVQRTNPGEKIRSVLLQNFESMELFFPLDFSDVL SINSRFTRFSGAKLTMKNLNAFLKLWRKGCNPNVKHFATYSVPVLDGSDYVTNVLKGI PHQNIPDTVERSFLKLPFSLPIKYEKIQGGYDIKRMTDGQMATVKLDYWYKETSSKPL LSIGDYLNDAEFYRPNFDQCVCLGLIICVFSFFFDFQKNYCQNE" gene complement(<20642..>21765) /locus_tag="CAEBREN_07813" /db_xref="WormBase:WBGene00146538" mRNA complement(join(<20642..21593,21695..>21765)) /locus_tag="CAEBREN_07813" /product="hypothetical protein" /db_xref="WormBase:CBN07813" /db_xref="WormBase:WBGene00146538" CDS complement(join(20642..21593,21695..21765)) /locus_tag="CAEBREN_07813" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45704.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN07813" /db_xref="WormBase:WBGene00146538" /translation="MIPLLRLPKRALDIVLRNLTTMNQYLLAIYDDCFKSEIKSLTIG IDFTFKIIVSDVFFMYIVGPDDAWSYLDIIIYNNESGSVARKEGEPKRSFTENDRISV MYRDYDWDYGWSYNPQGNARQWILLIMEVFNLKKIDNLHYGMDNWCFDSVKEMLKGIP LETLEISEEEPLRNYEQILKTVPPCSHFVQETNPGEKFRRVLIQNFESMRVSLLNFSE LFIINSKFLSISERKFTIKNMNTFLKLWRKGSNPNAKHFSIRSIPIPANDDVMNILKG IPYETIPDAVERSFLKFIYSPPVKYEKIQGGYDIKRMTDGRKATVKLERRWESNLYFD FFVWDE" gene complement(<22349..>23460) /locus_tag="CAEBREN_25748" /db_xref="WormBase:WBGene00164473" mRNA complement(join(<22349..23291,23390..>23460)) /locus_tag="CAEBREN_25748" /product="hypothetical protein" /db_xref="WormBase:CBN25748" /db_xref="WormBase:WBGene00164473" CDS complement(join(22349..23291,23390..23460)) /locus_tag="CAEBREN_25748" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45777.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN25748" /db_xref="WormBase:WBGene00164473" /translation="MIPLHRLPERAVDIVLRNMTTMNQFLLSLYYDHVKSRIKSFDIG IDLKFTIVIRDYFWMCISDPDHNFLTFTFYTLKDGTLFRQEGEPKRSFSENDLVSISF DGDDRIYGWTFEAQKSARQWILLIIEVFNLKKIDDLKYETDDYCFDSVKDMLKGIPLE RLNITGDEAARNYDGILKTVPPCTHLVQETNPGEKFRSVLLQNFESLRASLLNFSELL IINSKFLSIYGEKFTIKNMNTFLKLWRKGSNPNAKHFSMSWVPIPDNDDIMNVLKAIP YEAIPDAVERLFLRFPFSLPVTYEKIRGGFDIKRMTDGRKATVKLHGRLGSFSFELFV WDE" gene complement(<23895..>24915) /locus_tag="CAEBREN_04364" /db_xref="WormBase:WBGene00143089" mRNA complement(join(<23895..24801,24845..>24915)) /locus_tag="CAEBREN_04364" /product="hypothetical protein" /db_xref="WormBase:CBN04364" /db_xref="WormBase:WBGene00143089" CDS complement(join(23895..24801,24845..24915)) /locus_tag="CAEBREN_04364" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45816.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN04364" /db_xref="WormBase:WBGene00143089" /translation="MIPLRRLPKRALDIVLKNMTTMKQLFISLCNKSFKSQIHLLNTG IDFEFRIMIGEVFRIYVLSPDRGSLGLYFHTNESEDWSRKEGEPKRTFAENDTVLITY IANDWKYGKRFDANNSKKSARQWILLLILFFDSIKETLRGLKLETLEITGNAAMSKYQ EILKSVPPSDNFVQDSIQEVENYQNVLIQNFVAIDISFHSNFSDVLLNNSKFALIPGE RFTIKNLNQFLKLWIKGSNPNAKLFSIDWVPLWNDEDVEDVLKGIPYEVIPYTVERSL LNVPDYVPDADKKIRGGYGIRRMVDGAEATVKLDCFSTAFSFELFVWDE" assembly_gap 26657..26666 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 27584..27593 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<27647..>31788) /locus_tag="CAEBREN_30529" /db_xref="WormBase:WBGene00192494" mRNA complement(join(<27647..28019,28698..28879,29090..29387, 29434..29530,29617..29692,29742..29856,30389..30618, 31567..>31788)) /locus_tag="CAEBREN_30529" /product="hypothetical protein" /db_xref="WormBase:CBN30529" /db_xref="WormBase:WBGene00192494" CDS complement(join(27647..28019,28698..28879,29090..29387, 29434..29530,29617..29692,29742..29856,30389..30618, 31567..31788)) /locus_tag="CAEBREN_30529" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001932 (Protein phosphatase 2C-related), IPR001611 (Leucine-rich repeat), IPR014045 (Protein phosphatase 2C, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45635.1" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR001932" /db_xref="InterPro:IPR014045" /db_xref="WormBase:CBN30529" /db_xref="WormBase:WBGene00192494" /translation="MKHLKTIDLSHNRLNSFDDSALSTLEMLEDLNLSSNRLTRLADC LALLPSLQVLRAHSNQLVHVPELQGAAQLHTIDLSSNNISLGTLQFKAPPSLRHFDVT CNSGDFDTENFPENSNLIKKMNTIDISEGPHNLFGFQIGVSGSRGMKNKQCIRQVRVE NTFGFIDGGSNSYMSSSICRFLTSYLRENSFTDIRSILLRCHCELGEEGERLGASVMI IRLHEKRIEIASTGTMSAAIARHQKLRMIINGRYEIDDDEYSRIREAHGFVDEENRIN GVIGSSRQLGHFSTFPVVLPTHSYQNIPLSEQIEGLIIANSTVWSMLSLEDLSMAFHN NRSPIVVAKKIQDQLQSYDYGGNSNILVLRRIKPQMTFNGFSTVSSSRQLTPEITNNN KTSATNSSRPKIDEQLVLAVPALILPEYHPSPPGPAPSHNSSGPNLPPPPPPPVPATR HRTPSPPPPPLPLSTPPPVSSELEEINIHQSATSSGYTLSIDRFYSSSSTVSSRKQFN ETRDLLSRSLKLSPPNTVTFNI" assembly_gap 29916..29925 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<31878..>32726) /locus_tag="CAEBREN_30749" /db_xref="WormBase:WBGene00192714" mRNA complement(join(<31878..32127,32509..>32726)) /locus_tag="CAEBREN_30749" /product="hypothetical protein" /db_xref="WormBase:CBN30749" /db_xref="WormBase:WBGene00192714" CDS complement(join(31878..32127,32509..32726)) /locus_tag="CAEBREN_30749" /note="contains similarity to Pfam domain PF00560; contains similarity to Interpro domain IPR001611 (Leucine-rich repeat)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45622.1" /db_xref="InterPro:IPR001611" /db_xref="PFAM:PF00560" /db_xref="WormBase:CBN30749" /db_xref="WormBase:WBGene00192714" /translation="MVALDPSPAQNNEPVTHQFSVLDSLVIMPLPQNLQTLSLSYNHF RNLPDWISDCPNLSFLRANNNGLVALPERIFFSPSLRSIFAFVNEIDHLPDFGEENCL ETLILYKNKISSLPKHFFSVLPRLRQLNISSNFIELLPYFDGSNFCRVQVRQI" assembly_gap 33956..41397 /estimated_length=7442 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<41418..>41762) /locus_tag="CAEBREN_29366" /db_xref="WormBase:WBGene00191331" mRNA complement(join(<41418..41434,41519..>41762)) /locus_tag="CAEBREN_29366" /product="hypothetical protein" /db_xref="WormBase:CBN29366" /db_xref="WormBase:WBGene00191331" CDS complement(join(41418..41434,41519..41762)) /locus_tag="CAEBREN_29366" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45616.1" /db_xref="WormBase:CBN29366" /db_xref="WormBase:WBGene00191331" /translation="MSDENDGETDSQALEDILSYTDSPAFRHIFSFFLGRPRIRAKST LNSDILSEEVTIRKGKLIHTWQNARAVFYNSNIRLQTTLTGV" gene complement(<42150..>42425) /locus_tag="CAEBREN_22592" /db_xref="WormBase:WBGene00161317" mRNA complement(<42150..>42425) /locus_tag="CAEBREN_22592" /product="hypothetical protein" /db_xref="WormBase:CBN22592" /db_xref="WormBase:WBGene00161317" CDS complement(42150..42425) /locus_tag="CAEBREN_22592" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45831.1" /db_xref="WormBase:CBN22592" /db_xref="WormBase:WBGene00161317" /translation="MNNEQLQSTSNTPSSSSQMLLKPMKKKTSRFLRLYSSDGQRSTR MECDENTTCAQICQQFSCDVITLQIGNYHFRWVFFPKDLSFLDLVIH" gene complement(<44899..>46677) /locus_tag="CAEBREN_13892" /db_xref="WormBase:WBGene00152617" mRNA complement(join(<44899..45279,45966..46232,46414..>46677)) /locus_tag="CAEBREN_13892" /product="hypothetical protein" /db_xref="WormBase:CBN13892" /db_xref="WormBase:WBGene00152617" CDS complement(join(44899..45279,45966..46232,46414..46677)) /locus_tag="CAEBREN_13892" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45733.1" /db_xref="WormBase:CBN13892" /db_xref="WormBase:WBGene00152617" /translation="MLLLFQFLFSIINCHEYIFENGIPKKIQDQIQLENPIIPNRLLS PKFNESIGHMLMNPLEEGKKGLVPKEQDLMEYFSDLTPDEMEFLGLRELVRLCPDANN TDLPMLFPRFLCGLSAVYRKDGRWNLKYTELIFPRLTDAIRSLNDVENYPCHKLNRTD VVALLPGRIYSGCVDDTDPLSYSQFTSAFVMTHPFPDALKSCSPPRPACELRSMIFQH RVLYQEEDCCCEGQACALLIFSQTTSLVPLVIKTIDLSREKMVRVPGRTTTPDDHLSD RDDSGKSGDVDQSTAPPVGGNFLSGRR" gene complement(<46948..>47617) /locus_tag="CAEBREN_08875" /db_xref="WormBase:WBGene00147600" mRNA complement(join(<46948..47151,47199..47379,47430..>47617)) /locus_tag="CAEBREN_08875" /product="hypothetical protein" /db_xref="WormBase:CBN08875" /db_xref="WormBase:WBGene00147600" CDS complement(join(46948..47151,47199..47379,47430..47617)) /locus_tag="CAEBREN_08875" /note="contains similarity to Pfam domain PF06487; contains similarity to Interpro domain IPR010516 (Sin3 associated polypeptide p18)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45772.1" /db_xref="InterPro:IPR010516" /db_xref="PFAM:PF06487" /db_xref="WormBase:CBN08875" /db_xref="WormBase:WBGene00147600" /translation="MSNGSSQITSQVVVGQDKPVNREKVCPLLLRVFCSSNRHNPVTE FNNRNGGTVPSGELQMYTWMDCTLQELAELVRSINPETRRRGAMFDFAIVSADRTSQR FNMREIGNTQNGQRGIDDSKTLQQCKFEIGDFIDIAITLPGGGRGRFGGGGGGDRFGG GDRFERRGNNEDRFERRQQQRSPIRGRSPL" gene <48297..>49934 /gene="Cbn-rnf-121" /locus_tag="CAEBREN_00643" /db_xref="WormBase:WBGene00139368" mRNA join(<48297..48347,48499..48970,49242..49333,49425..49570, 49620..49739,49814..>49934) /gene="Cbn-rnf-121" /locus_tag="CAEBREN_00643" /product="CBN-RNF-121 protein" /db_xref="WormBase:WBGene00139368" CDS join(48297..48347,48499..48970,49242..49333,49425..49570, 49620..49739,49814..49934) /gene="Cbn-rnf-121" /locus_tag="CAEBREN_00643" /note="contains similarity to Pfam domain PF00097; contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR018957 (Zinc finger, C3HC4 RING-type)" /codon_start=1 /product="CBN-RNF-121 protein" /protein_id="EGT45820.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR018957" /db_xref="PFAM:PF00097" /db_xref="WormBase:CBN00643" /db_xref="WormBase:WBGene00139368" /translation="MGQHGAIRLQNEVQDGVIPVHELTEEEQWAEEHRKMHEKHKGHD AMHMEMMLIFIISVVVGQIFLVTWKRKHFKSYQMCTLIGMITIPVYVCFSRSWWRFIA TWLVFIVFSAFIWIRASAQHISGGTPRMVYKWFLFLHKMSYVLGVVGYLIMMAALLGF HVLFGVTQPTLMDVGILFMFYGVYYGVLGRDFAHICTDRMASRIGYYTSEGLPKKHLE DGVCAVCGGRLDDSEHVHEAVVQNRLGEDDQEKLYKLSCGHVFHEFCIRGWVVVGKLQ TCPYCKERVDLQRMFKNPWEKPHLFYGKLLDWIRYLVCWQPLIVTGVQGITTWLGLE" gene <50275..>51907 /gene="Cbn-ccdc-55" /locus_tag="CAEBREN_00214" /db_xref="WormBase:WBGene00138939" mRNA join(<50275..50388,50942..>51907) /gene="Cbn-ccdc-55" /locus_tag="CAEBREN_00214" /product="CBN-CCDC-55 protein" /db_xref="WormBase:WBGene00138939" CDS join(50275..50388,50942..51907) /gene="Cbn-ccdc-55" /locus_tag="CAEBREN_00214" /note="contains similarity to Pfam domain PF09745; contains similarity to Interpro domain IPR018612 (Protein of unknown function DUF2040, coiled-coil)" /codon_start=1 /product="CBN-CCDC-55 protein" /protein_id="EGT45765.1" /db_xref="InterPro:IPR018612" /db_xref="PFAM:PF09745" /db_xref="WormBase:CBN00214" /db_xref="WormBase:WBGene00138939" /translation="MSASKNKYGLIIKQKEEPSKQRTLKPNVLWDDEDDDDRKEEARK ADKNRESKYAEAIIKAHARRQLEQFSREERQQIKEREKEGTEFADKEVFVTGAYRKQQ EEVKKFREEEAQEALFNDATSVQRQKMWEMGMGRTLLNDLARDPTAIKQRKKEQKNVR RREDSDEEEAEPKTTESGAEKSQKTKKAAEKKSIYSSDSEPEPDKSAPPQKNFSGELK PGLNTVTKKATTHAERIRQRNFTPENSDSEDETSRRAAPRSIGSHRDSRRSESPRRGS RGSPDSRKPSEDSRRRSKSPEAAAPKAHKLSLKEKLKPKRVDKEARLKGLKLILKQRN TEEDIESARQRYFERREQGVVVPPL" gene <52278..>55545 /locus_tag="CAEBREN_31835" /db_xref="WormBase:WBGene00193800" mRNA join(<52278..52345,53094..53340,53440..53728, 55430..>55545) /locus_tag="CAEBREN_31835" /product="hypothetical protein" /db_xref="WormBase:CBN31835" /db_xref="WormBase:WBGene00193800" CDS join(52278..52345,53094..53340,53440..53728,55430..55545) /locus_tag="CAEBREN_31835" /note="contains similarity to Pfam domain PF00097; contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR017907 (Zinc finger, RING-type, conserved site), IPR018957 (Zinc finger, C3HC4 RING-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45638.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR017907" /db_xref="InterPro:IPR018957" /db_xref="PFAM:PF00097" /db_xref="WormBase:CBN31835" /db_xref="WormBase:WBGene00193800" /translation="MASETQAPNQEPTSSANKEESARFECNICLDAAKDAVVSLCGHL FCWPCLSQWLDTRPNNQVCPVCKSAIDGSKVVPIYGRGGDSADPRSKVPPRPKGTRTE PPQQTFGGFNWGAFNGGGDGQGGMGGTNVHFSFGIGTVNGLLPLMFMLPLIQGIFPLS FVASFFGGNNNNNNNNNGGGGAAEGGAGAAGQDGHTHGHTHGHHQSVPPHGSRQAIEE EWLSNIFKYIGFFMLFWLLFL" assembly_gap 52586..52896 /estimated_length=311 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 54137..54146 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <56033..>56958 /locus_tag="CAEBREN_00569" /db_xref="WormBase:WBGene00139294" mRNA join(<56033..56083,56139..56206,56258..56612, 56656..>56958) /locus_tag="CAEBREN_00569" /product="hypothetical protein" /db_xref="WormBase:CBN00569" /db_xref="WormBase:WBGene00139294" CDS join(56033..56083,56139..56206,56258..56612,56656..56958) /locus_tag="CAEBREN_00569" /note="contains similarity to Pfam domain PF08790; contains similarity to Interpro domain IPR014898 (Zinc finger, C2H2, LYAR-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45623.1" /db_xref="InterPro:IPR014898" /db_xref="PFAM:PF08790" /db_xref="WormBase:CBN00569" /db_xref="WormBase:WBGene00139294" /translation="MVFFSCNNCGEACKKNQVERHLFQCRNTTFSCIDCQLVWTRETY KDHVKCITENQKYGGKNYVEKENKGEAKQNAWVDQVNRAIEFVTDSQVKELLKSVAGF ANIPRKEAKFINFLTNSCRLRDKNLALRAWQAIAAEAEKMREEAIRKQEEMQKLEKAK KEAAAAAKETPTEKTGSEDVEASEATTSSSSGFKWKKVIKRKLKENGGEMKIKKLRKA VIEEFSAENREDSDDITAIFAEKLQKCGGVNVEGKMVSLG" gene complement(<57192..>58185) /locus_tag="CAEBREN_15866" /db_xref="WormBase:WBGene00154591" mRNA complement(join(<57192..57398,57561..57911,57955..>58185)) /locus_tag="CAEBREN_15866" /product="hypothetical protein" /db_xref="WormBase:CBN15866" /db_xref="WormBase:WBGene00154591" CDS complement(join(57192..57398,57561..57911,57955..58185)) /locus_tag="CAEBREN_15866" /note="contains similarity to Interpro domain IPR007144 (Small-subunit processome, Utp11)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45763.1" /db_xref="InterPro:IPR007144" /db_xref="WormBase:CBN15866" /db_xref="WormBase:WBGene00154591" /translation="MSSLVSISKKLSGQRQHRERSQPEARRKYGELEKKKDYKQRAED YQKKRDTIKKLKKSAMDKNQDEYHHHMVNSETWDDGRHFDKKNAAEEAETQIQRKLGS LKDLEYVKYKLNEEKRKIDEMKGELHFADPTLSGKKNSHTVFVESEAEAKSFDPRVYF DTTTSMLSRQFNRVKNDDLQNKTIIGAGSKEQVRKADRIRRTRYNELMKRVDRAKELQ VVADKLELKKQLAAGSKSELKPKKIKKAKNMRAAVYQWTYERKK" gene complement(<59016..>60567) /locus_tag="CAEBREN_15027" /db_xref="WormBase:WBGene00153752" mRNA complement(join(<59016..59104,59151..59507,59560..59720, 59767..60076,60164..60219,60557..>60567)) /locus_tag="CAEBREN_15027" /product="hypothetical protein" /db_xref="WormBase:CBN15027" /db_xref="WormBase:WBGene00153752" CDS complement(join(59016..59104,59151..59507,59560..59720, 59767..60076,60164..60219,60557..60567)) /locus_tag="CAEBREN_15027" /note="contains similarity to Pfam domain PF00153; contains similarity to Interpro domains IPR002067 (Mitochondrial carrier protein), IPR018108 (Mitochondrial substrate/solute carrier), IPR001993 (Mitochondrial substrate carrier)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45847.1" /db_xref="InterPro:IPR001993" /db_xref="InterPro:IPR002067" /db_xref="InterPro:IPR018108" /db_xref="PFAM:PF00153" /db_xref="WormBase:CBN15027" /db_xref="WormBase:WBGene00153752" /translation="MPSPQTNGEVLSEAADSRRDAAVTPLDVVKIRLQQQTRPFPKGE CFYYHNGLMDVVCEACEVRKPCEWYQRPGNFRGTADAFVKIARHEGIRSLWSGLAPTM VMALPATVFYFTTYDNLSAWLKKKMCCRRAFSPDKWTPPDWTAAAIAGIAARTIAVTV VSPVEMIRTKMQSQRLTYHEIGHLVRSSWATKGISAFYLGWTPTMLRDIPFSGIYWAG YDWFKTTLQRRQGPDHNPFVVSFVSGAAAGAVASVFTHPFDVIKTNCQIRIGGTADHM SKSIGAVIREMYHTRGWHAFSAGLAPRLVKVAPACAIMISFYEYFKYLFQK" gene complement(<61026..>65009) /gene="Cbn-lars-1" /locus_tag="CAEBREN_11363" /db_xref="WormBase:WBGene00150088" mRNA complement(join(<61026..61237,61293..61425,61472..63007, 63183..64268,64381..64852,64897..>65009)) /gene="Cbn-lars-1" /locus_tag="CAEBREN_11363" /product="CBN-LARS-1 protein" /db_xref="WormBase:WBGene00150088" CDS complement(join(61026..61237,61293..61425,61472..63007, 63183..64268,64381..64852,64897..65009)) /gene="Cbn-lars-1" /locus_tag="CAEBREN_11363" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR015413 (Aminoacyl-tRNA synthetase, class I (M)), IPR013155 (Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding), IPR004493 (Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic), IPR002300 (Aminoacyl-tRNA synthetase, class Ia), IPR001412 (Aminoacyl-tRNA synthetase, class I, conserved site), IPR015803 (Cysteinyl-tRNA synthetase, class Ia, N-terminal), IPR018252 (Annexin repeat, conserved site), IPR014729 (Rossmann-like alpha/beta/alpha sandwich fold)" /codon_start=1 /product="CBN-LARS-1 protein" /protein_id="EGT45646.1" /db_xref="InterPro:IPR001412" /db_xref="InterPro:IPR002300" /db_xref="InterPro:IPR004493" /db_xref="InterPro:IPR013155" /db_xref="InterPro:IPR014729" /db_xref="InterPro:IPR015413" /db_xref="InterPro:IPR015803" /db_xref="InterPro:IPR018252" /db_xref="WormBase:CBN11363" /db_xref="WormBase:WBGene00150088" /translation="MSKVKQERKKVAQLQEIEKSIQELWESKKAFESDARDDNKPKYL VTFPFPYMNGRMHLGHTFSASKCEFAAGFQRLQGKQVLFPFGFHCTGMPIKACADKLK REMDDFGFPPKFPEDVEEVVKEEVSAADDYLKDKSKGKKTKLVAKTGNAKYQWQIMKS LGMEDEEIRKFADPNHWLYYFPPHCMADLKKMGLKADWRRAFITTDVNPYFDSFVRWQ FNLLRAAKKIDFGKRYTIYSPKDGQPCMDHDRASGEGVGPQEYTLIKLKVLEPKPAAI AHIKEDVHLVAATLRPETMYGQTNCYLHPDIQYSVFYATEKEDQVFVATARSARIMSY QGLTKENGKVRYVEGLEKIAGSKLLGAPLSAPLSHYTKVYALPMFTIKDDKGTGVVTS VPSDSPDDYASLCDIKKKQPLREKYGITDEMVLPFEPTPIIRIDGLGDLAAVFMYDKL KIQSPNDSKNLEEAKKEVYLKGFYDGLMLVGKYAGKKTSEVKKAIQDDLFAEGLATKY VEPEKKVVSRSGDECVVALCDQWYLTYGEIEWKAAAKRVLEPMRTFNDETRRGLDTTI DWLHEYACSRSYGLGTKLPWDTQYLIESLSDSTIYNAYYTVSHLLQQGAFDGSVVGPA GIKADQMTDAAWSYVFLGEVYDSKTMPVEEEKLKKLRKEFMYWYPIDMRASGKDLVGN HLTYLLFNHAAIWPKDESKWPKGIRANGHLLLNNEKMSKSTGNFMTLEEAIEKFSADG MRLSLADAGDGLEDANFVYAMADAAILRLFTMIEWIKEMIEQRDAGLLRKNSSRFADR VFANEMNILIKATEQNYEATNFKEALKTGFFEFQAIRDTYREVCTGIDEPMSEELVFR FIETQMLILSPICPHIAEYVWQLLKKDGLIVDAAWPVTQEVDEKLALGSRFMSDAMTE FRSRLKTYMAPKKKLPKEIVEPPTEAVIFVAKSYPPWQKTILDILESQVSNGALPDNK VISQLIGKEESLKKFAKKAMPFVQMIKEKFEQKGVSALASTSPIDQSAILEENLDFIM NALDLDRVSIRLTEEEGVEANIAETTVPLVPMMNFLQKRPTVNLVARNVQICNGMFDV VAPIVDGDTVAMVVRKLRRISKAIKPKFEVTLWRYKDSVWGDRKVISCNAPFEENIQL ADGDVFNLEEGNKITVTSGSQKFDVGLTIVYKANVPE" gene <66714..>68342 /locus_tag="CAEBREN_06616" /db_xref="WormBase:WBGene00145341" mRNA join(<66714..66785,67491..>68342) /locus_tag="CAEBREN_06616" /product="hypothetical protein" /db_xref="WormBase:CBN06616" /db_xref="WormBase:WBGene00145341" CDS join(66714..66785,67491..68342) /locus_tag="CAEBREN_06616" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45784.1" /db_xref="WormBase:CBN06616" /db_xref="WormBase:WBGene00145341" /translation="MKRSHLLILVICTSAAAAAVQQKKTRDAPSSTDNIGDDYSDFSA QPVKNAGANHDLKQVTYSTIAPKFDIPTRAPLLNPNPIGQRNPVPATTKKPVVVDYRR GYYFQHYPWDRLPRRYLLRPGMTYVYPPQYQYATYRYPYLPYTDHYSIYRTHPGIGGG CGGAGGCGGGGYQGYGGYAQAYQGYGGGCSGGSGSGCGGYDDDDDSEEYEDSEEGDGK SGEAKINKKDPLEDLELEDLEKLSKSDDAAATKSGSTDSTTSDDADLEESEPIEIKKS GGGGGKSKHHDDEDLIDDRKKVKRNFLIKWA" gene <72975..>75142 /gene="Cbn-dnj-16" /locus_tag="CAEBREN_07599" /db_xref="WormBase:WBGene00146324" mRNA join(<72975..73055,73353..73575,73824..73990,74038..74562, 74996..>75142) /gene="Cbn-dnj-16" /locus_tag="CAEBREN_07599" /product="CBN-DNJ-16 protein" /db_xref="WormBase:WBGene00146324" CDS join(72975..73055,73353..73575,73824..73990,74038..74562, 74996..75142) /gene="Cbn-dnj-16" /locus_tag="CAEBREN_07599" /note="contains similarity to Pfam domain PF00226; contains similarity to Interpro domains IPR015609 (Molecular chaperone, heat shock protein, Hsp40, DnaJ), IPR003095 (Heat shock protein DnaJ), IPR001623 (Heat shock protein DnaJ, N-terminal), IPR018253 (Heat shock protein DnaJ, conserved site)" /codon_start=1 /product="CBN-DNJ-16 protein" /protein_id="EGT45655.1" /db_xref="InterPro:IPR001623" /db_xref="InterPro:IPR003095" /db_xref="InterPro:IPR015609" /db_xref="InterPro:IPR018253" /db_xref="PFAM:PF00226" /db_xref="WormBase:CBN07599" /db_xref="WormBase:WBGene00146324" /translation="MSTATTPGDKPKAEELDFYQLLGVERSASEAEIKSAYRKLALKY HPDRNPNDTHAQEEFKKVSIAYSVLSDPNKRRQYDVSGPSENQLDFEGFDVSEMGGVG RVFGALFTKLGVPIPTQIVPKVLAQARQICLGQESEVHAKPLAPGETITASVSKQHAH FYEIDMHEEFRKNGVAIICKSSSSKFKLVLFDKEGGVRMIQESGKRGKSGTQADMFFV PYTVANISEFNPMKYHLEDKETPLAFHYLDTFEMQTATLLETRKHYVAVYGDNWISDV KYSITFLPVASAASEQLTEIQNTEKSISLIKKEMYDFQREFTEAKRKYDEAVAKLKVQ DETILKALSTREELYNEVVRQSQEPYNKKISPAKTSGGGFLGGWFK" gene <76196..>78600 /locus_tag="CAEBREN_10689" /db_xref="WormBase:WBGene00149414" mRNA join(<76196..76465,76509..76751,76854..77138,78034..78318, 78361..>78600) /locus_tag="CAEBREN_10689" /product="hypothetical protein" /db_xref="WormBase:CBN10689" /db_xref="WormBase:WBGene00149414" CDS join(76196..76465,76509..76751,76854..77138,78034..78318, 78361..78600) /locus_tag="CAEBREN_10689" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45730.1" /db_xref="WormBase:CBN10689" /db_xref="WormBase:WBGene00149414" /translation="MYFLLFSSATEIIYSRFQPYSPAQMFLWKVSNISFILYIISFYF DCRREYLLAILSIEEREAEKRKPKMSRFFKGELTGRIETMLFAKSEMHFFNAMVCVMS HYSPVLPQPDMRTIDFCCFSFPGLCFHVLLIMVEFEMSEQEWLRVQKERSYDDEVIRG AARLGWSNEIRASIITILCLICSSATEIIYTQLEPYSPAQTFFWTVSYVSFILYLVLF YLDCREEYFLATLSPADRRAEVRKPERSLFFDGQIPGTIEIMMFAKSEASCITILCLI CSSATEIIYAQLEPYSPAQTFFWTISYVSFVLYIILFYLDCREEYYLSTLSPADRRAE VRKPERSLFFDGQIPGTIEIMMFAKSEFHFATAFSCLSIHFAVALALMFNGILKYMCF LVISFFGFCVLGVLVFFQWNIAYPSWEGIIYERKLLKEWAEAAKATKK" gene <78869..>79746 /locus_tag="CAEBREN_07812" /db_xref="WormBase:WBGene00146537" mRNA join(<78869..78973,79025..79126,79418..79488, 79587..>79746) /locus_tag="CAEBREN_07812" /product="hypothetical protein" /db_xref="WormBase:CBN07812" /db_xref="WormBase:WBGene00146537" CDS join(78869..78973,79025..79126,79418..79488,79587..79746) /locus_tag="CAEBREN_07812" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45734.1" /db_xref="WormBase:CBN07812" /db_xref="WormBase:WBGene00146537" /translation="MDYIPGYAVVFGVAAFCLAHDVGLQVPYGWMKRIEASILTLLLL LFCTATEIVYGFFAVNSPAHDFWLKGILLTNPISPGTICLKLIYSYKQSTFHEIGKMF GVSFLISFIGLCLHLAVIVLVATEGHREWLRIRKRFGNYKYSL" gene <80076..>80737 /locus_tag="CAEBREN_12756" /db_xref="WormBase:WBGene00151481" mRNA join(<80076..80147,80206..80490,80534..>80737) /locus_tag="CAEBREN_12756" /product="hypothetical protein" /db_xref="WormBase:CBN12756" /db_xref="WormBase:WBGene00151481" CDS join(80076..80147,80206..80490,80534..80737) /locus_tag="CAEBREN_12756" /note="contains similarity to Interpro domain IPR003006 (Immunoglobulin/major histocompatibility complex, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45559.1" /db_xref="InterPro:IPR003006" /db_xref="WormBase:CBN12756" /db_xref="WormBase:WBGene00151481" /translation="MSMQTEPYEDIEDVPRLGWTNNIRTSVIGMYFLLFSSAIEIIFS KLEPYSPAQMFLWKVSNISFILYIITFYFDCRREYLLAKLSVEEREAEERKQNMSRFF KGELPGPVETMAFAESRNHRMNAYICIASHFGPTLEHPSLQNTVLLFSFIGLCIHSIL ILMEIGTSVITWMIVQEEREMEKRDC" gene <81090..>84920 /locus_tag="CAEBREN_22192" /db_xref="WormBase:WBGene00160917" mRNA join(<81090..81161,82263..82889,82937..83096,83521..83808, 83853..84010,84159..84683,84849..>84920) /locus_tag="CAEBREN_22192" /product="hypothetical protein" /db_xref="WormBase:CBN22192" /db_xref="WormBase:WBGene00160917" CDS join(81090..81161,82263..82889,82937..83096,83521..83808, 83853..84010,84159..84683,84849..84920) /locus_tag="CAEBREN_22192" /note="contains similarity to Pfam domain PF00226; contains similarity to Interpro domains IPR015609 (Molecular chaperone, heat shock protein, Hsp40, DnaJ), IPR003095 (Heat shock protein DnaJ), IPR001623 (Heat shock protein DnaJ, N-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45774.1" /db_xref="InterPro:IPR001623" /db_xref="InterPro:IPR003095" /db_xref="InterPro:IPR015609" /db_xref="PFAM:PF00226" /db_xref="WormBase:CBN22192" /db_xref="WormBase:WBGene00160917" /translation="MSTQTEPYEIIRGVPRLGWSNNIRCYTVYHGLEACCHPSFRWLS GNLLGYRKYIESSIPRNSYNIWNVLANIFVFQVLRSRKYALLNKFNKRRIFNISDFFF ALCHPNFLILGGMDWDYFVRLWARFLLALLHAVSKFRMLWIKKWEPSLVTQLLGLLIA FCGCATSYPYCANEDIESSVDFTRRVFLLFIVGVLADVAASSVLNSNFHMDITDPFLN RIVNVILDILQHRPSMHFSLYAGVTSTGIMSSLSGDTHIGKVFAFWLCVVMIAFTAAV LIGQSMWNVLSNQTPPEAGQQSHYDILGIDRAASGTAIKRAFRMKVLKNHPDRNPGCN LARSMLRKVLTAYEILSDEERRQEYDETGRNENLNIGIASLFQSAAEIGSIIGEITGI QLKKIPNTVLSEIKNIMSHAGHAGNIHTLNERFPAVTDKIAPGKAVHTSFDPSPNDFL RGFLLTLKAVPRDLAFVVFGKDGVQKYQVDGRKTQTGSITKPIAFLRHHSPTLYSFDG TPVLFDLTPITAFLDSLNFAGISIAKWLPQGGHIFSVYNGGMALPEDIDIHYYPMSND RKNLVDTMITKQEEIEKIVRKIKEKTEQFQDFKRKKDEMKAKITVHDNELLDAMNEFE ETLLLLRTN" gene <86776..>88211 /gene="Cbn-xbp-1" /locus_tag="CAEBREN_07104" /db_xref="WormBase:WBGene00145829" mRNA join(<86776..87072,87196..87714,87855..>88211) /gene="Cbn-xbp-1" /locus_tag="CAEBREN_07104" /product="CBN-XBP-1 protein" /db_xref="WormBase:WBGene00145829" CDS join(86776..87072,87196..87714,87855..88211) /gene="Cbn-xbp-1" /locus_tag="CAEBREN_07104" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR011700 (Basic leucine zipper), IPR004827 (Basic-leucine zipper (bZIP) transcription factor), IPR011616 (bZIP transcription factor, bZIP-1)" /codon_start=1 /product="CBN-XBP-1 protein" /protein_id="EGT45714.1" /db_xref="InterPro:IPR004827" /db_xref="InterPro:IPR011616" /db_xref="InterPro:IPR011700" /db_xref="WormBase:CBN07104" /db_xref="WormBase:WBGene00145829" /translation="MSNYPKRIFVLPPPRPRGMAVPRVVPSLTPSPSPPQRQLKRVLQ PVDTEQIVAELLGDDMGPSGPRKRERLNHLSQEEKMDRRKMKNRVAAQNARDKKKERS GKIDEVMRDLVAENVRLRAENEQLRRQNEELLLQQQQQQTQYIHTPCYTPEHNTTTPT DENIYSNVVYEEEVVDEQQDGSDRRAVVVVEEEADQHAFESAVFINAPLPWDKANRSK SDNSNEDSHNVTTIAQLHNSPSKRTDSNSNNKKVNLNTYLSILSLLCTNQGQPTTPSD GEFDQFVANYIEEGSHFPTPSTSVGSGGSSVYSAPSETCETFSTASACGSLALSPSMS SNGSCDWNDDFFNGTAFEADQQMMPMSEEDPDALIDPGNWNFENFDDSDIDLDFFK" gene <91025..>94503 /gene="Cbn-asd-1" /locus_tag="CAEBREN_09445" /db_xref="WormBase:WBGene00148170" mRNA join(<91025..91054,92243..92582,93023..93159,93207..93354, 93403..93858,94211..>94503) /gene="Cbn-asd-1" /locus_tag="CAEBREN_09445" /product="CBN-ASD-1 protein" /db_xref="WormBase:WBGene00148170" CDS join(91025..91054,92243..92582,93023..93159,93207..93354, 93403..93858,94211..94503) /gene="Cbn-asd-1" /locus_tag="CAEBREN_09445" /note="contains similarity to Pfam domain PF00076; contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1)" /codon_start=1 /product="CBN-ASD-1 protein" /protein_id="EGT45670.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="WormBase:CBN09445" /db_xref="WormBase:WBGene00148170" /translation="MTTAAELITVEKLDDFDLKVALQQQMVAAAAQANNNVLRPIQIG TSLPTTSGEVAVAAQTPSASTTTSIKSEPAMPPQPLMNNNNNNNHHNPPPTHQYQNHQ GKPLQIGPVAPANMQIDRSNSSEGDGNRRLHVSNIPFKYREPDLQAMFEKYGTVVDVE IIFNERGSKGFGFVTMDSPADADRARQEIHGKLIEGRRVEVNMATQRVHTKKKAPLIQ AGADNLAVQNPLLNQLAAQQAQQQQIHRAILQQQLLAQQLMVQRQPLLMPPTSTAAIN LQALQLQSLIQQQQMQQNPQFLLQLQQQQQQAAQLAAAAAAAQQHQQQTPGGAAQLLQ QQQMAALGMDPLGQAQMAAMIALEQQRIMQAATAVQGRNVHQPPNGRVPTSSAGAMHQ PPPPPANSAAAAAAAAAAAAAAGHNVGDPYLQQSLTGASYHHHNPHQNPHHPHHQQSL HPAAAAAAALQRRFAPY" gene complement(<95784..>97079) /locus_tag="CAEBREN_01101" /db_xref="WormBase:WBGene00139826" mRNA complement(join(<95784..96048,96097..96386,96433..96665, 96713..>97079)) /locus_tag="CAEBREN_01101" /product="hypothetical protein" /db_xref="WormBase:CBN01101" /db_xref="WormBase:WBGene00139826" CDS complement(join(95784..96048,96097..96386,96433..96665, 96713..97079)) /locus_tag="CAEBREN_01101" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR005141 (eRF1 domain 2), IPR005142 (eRF1 domain 3), IPR004405 (Probable translation factor pelota)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45824.1" /db_xref="InterPro:IPR004405" /db_xref="InterPro:IPR005141" /db_xref="InterPro:IPR005142" /db_xref="WormBase:CBN01101" /db_xref="WormBase:WBGene00139826" /translation="MKEIKRFIDRDGKGYASLIAEEPEDMWHIYNLIRAGDVVKASTS RKVVSESSSGTVTNSRVFVKLAVKIETIDFDPGAHELHLKGKVIEENDVVKLGSYHTI DIEPHRKFTMEKEEWDSIDLERLDLALNPAATADVAAVVLHEGLANVCLITPAMTLTR AKIDMTIPRKRKGFTSTHEKGLDKFYEAVCAAFMRHVDLQVVKCVVVASRGFVKDAFF EHLQKYYEDNGKKLSADQKAKFMLTHSSSGFKHALKEVLETPQVAAKLADTKAQGEVK ALNQFLGLMSTDPDRAFYGYNHVNQANNELAIDTLLVADSLFRSQDINTRKKYVKLVE SVREQNGKVLIFSSMHVSGEQLDQLTGCAAILRYPMPDLDEVPISDDEEQ" gene <97484..>99134 /locus_tag="CAEBREN_14422" /db_xref="WormBase:WBGene00153147" mRNA join(<97484..97604,97829..98010,98286..98776,98820..98934, 98991..>99134) /locus_tag="CAEBREN_14422" /product="hypothetical protein" /db_xref="WormBase:CBN14422" /db_xref="WormBase:WBGene00153147" CDS join(97484..97604,97829..98010,98286..98776,98820..98934, 98991..99134) /locus_tag="CAEBREN_14422" /note="contains similarity to Pfam domain PF01728; contains similarity to Interpro domains IPR015507 (Ribosomal RNA methyltransferase J), IPR002877 (Ribosomal RNA methyltransferase RrmJ/FtsJ)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45571.1" /db_xref="InterPro:IPR002877" /db_xref="InterPro:IPR015507" /db_xref="PFAM:PF01728" /db_xref="WormBase:CBN14422" /db_xref="WormBase:WBGene00153147" /translation="MGKTSRDKRDIYYRLAKENKWRARSAFKLMQIDDEFQILKGVRR AVDLCAAPGSWSQVLSKRLYEEDKDAKIVAIDLQPMAPIPGVIQLQGDITSVDTANQV IEHFSGEKSDIVICDGAPDVTGIHSLDEFMQAELILAAFNITSHVLKIGGNFLAKIFR SRNSSLLYAQMKKYFKKVYLAKPRSSRQSSCEAFVLCLDYSPPEGFVPTMGKSSLEMT DASGVTAEVIDGFVTCGDLSGWDSEKSYPLDIDVCFPSANLDEEDKKRYEFKDVVQPP TDPAYKEALEMKKSGIFSKMNADMTKELKAQHKREDKLKIARAQEAESEKTAEKKEDS PVDKVAEELKAAKIEQ" assembly_gap 101621..101630 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <104452..>107140 /locus_tag="CAEBREN_06903" /db_xref="WormBase:WBGene00145628" mRNA join(<104452..104736,104792..104961,105006..105204, 105249..105357,106989..>107140) /locus_tag="CAEBREN_06903" /product="hypothetical protein" /db_xref="WormBase:CBN06903" /db_xref="WormBase:WBGene00145628" CDS join(104452..104736,104792..104961,105006..105204, 105249..105357,106989..107140) /locus_tag="CAEBREN_06903" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45577.1" /db_xref="WormBase:CBN06903" /db_xref="WormBase:WBGene00145628" /translation="MDPQIVPPEKYSNPYRNESNAKLVKIFLLAIDDLTDPENHQKVA MRAIEAQDIRQDLWTFEDQFRKLKVLEKWIVAQNRIYEEEINYTGATIYGLKTACLFT WSVAIAVSILLVMHFYYSGERISSYIVWTADLLLLGYAFFGYMVTSVALQPDLLIDES PVTTSPRIIDYEDMSAMKYEYLVSIMKGEQKRLINCYCEDVLPLNRRYKRNTKQHLKF LRLAYIPIYVYHLGFSAYLFLDLSYQGYAVVLLVFTYHEKLNFPSQTVKDIECRQFKC PVRNVFAEHKKRATVFAIFFFFFSCVAL" assembly_gap 105722..105731 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <112830..>113691 /locus_tag="CAEBREN_09527" /db_xref="WormBase:WBGene00148252" mRNA join(<112830..112975,113020..113134,113275..>113691) /locus_tag="CAEBREN_09527" /product="hypothetical protein" /db_xref="WormBase:CBN09527" /db_xref="WormBase:WBGene00148252" CDS join(112830..112975,113020..113134,113275..113691) /locus_tag="CAEBREN_09527" /note="contains similarity to Pfam domain PF01728; contains similarity to Interpro domains IPR015507 (Ribosomal RNA methyltransferase J), IPR002877 (Ribosomal RNA methyltransferase RrmJ/FtsJ)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45568.1" /db_xref="InterPro:IPR002877" /db_xref="InterPro:IPR015507" /db_xref="PFAM:PF01728" /db_xref="WormBase:CBN09527" /db_xref="WormBase:WBGene00148252" /translation="MTDASGVTAEVIDGFVTCGDLSGWDSEKSYPLDIDVCFPSANLD EEDKKRYEFKDVVQPPTDPAYKEALEMKKSGIFSKMNADMTKEVIEHFSGEKSDIVIC DGAPDVTGIHSLDEFMQAELILAAFNITSHVLKIGGNFLAKIFRSRNSSLLYAQMKKY FKKVYLAKPRSSRQSSCEAFVLCLDYSPPEGFVPTMGKSSLEMTDASGVTAEVIDGFV MCGDLSG" gene complement(<116953..>118052) /locus_tag="CAEBREN_01491" /db_xref="WormBase:WBGene00140216" mRNA complement(join(<116953..117125,117422..117514, 118016..>118052)) /locus_tag="CAEBREN_01491" /product="hypothetical protein" /db_xref="WormBase:CBN01491" /db_xref="WormBase:WBGene00140216" CDS complement(join(116953..117125,117422..117514, 118016..118052)) /locus_tag="CAEBREN_01491" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45602.1" /db_xref="WormBase:CBN01491" /db_xref="WormBase:WBGene00140216" /translation="MLRAAESRKEKKKDAVGPQAAAPEQLAIADAAANVQPPAPPRNA ILWRGYRPHARANVHCSESGLRRSCQKTWRYPGHCYPHVLVGMHSSSSNPKYFFSF" assembly_gap 129534..129543 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 145242..145251 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 150195..150228 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 154032..154041 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 156402..156411 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<156780..>158861) /locus_tag="CAEBREN_12786" /db_xref="WormBase:WBGene00151511" mRNA complement(join(<156780..157016,157912..158433, 158775..>158861)) /locus_tag="CAEBREN_12786" /product="hypothetical protein" /db_xref="WormBase:CBN12786" /db_xref="WormBase:WBGene00151511" CDS complement(join(156780..157016,157912..158433, 158775..158861)) /locus_tag="CAEBREN_12786" /note="contains similarity to Pfam domain PF00903; contains similarity to Interpro domain IPR004360 (Glyoxalase/bleomycin resistance protein/dioxygenase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45699.1" /db_xref="InterPro:IPR004360" /db_xref="PFAM:PF00903" /db_xref="WormBase:CBN12786" /db_xref="WormBase:WBGene00151511" /translation="MTARALHYVFKVANRAKTIDFYTKILDMKVLRHEEFDKGCEASC NGPYDERWSKTMIGYGPEDDHFVLELTYNYPIHKYELGNDYRAIVIDSDDLFDKISKI DHRKSGCGRLAVKDPDGHEFKIGKSAAPPKVLRVQLNVGDLEKSKKYWTETLEMGILE EKKTRIRMSYGDGQCELEIVQSGEKIDRKTGFGRIAFSYPGEKLQSLQDKIKSTGNTI INELLTLSTPGKADVQVVILADPDAHEICFVGDEGFRELSKVDESAEKELMKQIKEDD SEKWY" assembly_gap 159627..159636 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<160448..>160963) /gene="Cbn-har-1" /locus_tag="CAEBREN_15717" /db_xref="WormBase:WBGene00154442" mRNA complement(join(<160448..160818,160867..>160963)) /gene="Cbn-har-1" /locus_tag="CAEBREN_15717" /product="CBN-HAR-1 protein" /db_xref="WormBase:WBGene00154442" CDS complement(join(160448..160818,160867..160963)) /gene="Cbn-har-1" /locus_tag="CAEBREN_15717" /codon_start=1 /product="CBN-HAR-1 protein" /protein_id="EGT45749.1" /db_xref="WormBase:CBN15717" /db_xref="WormBase:WBGene00154442" /translation="MVRRRTASPAPSAPVRSAPRPAPTQSSFAPRAAAPAAAPHHPTP AATPMAPPMGAPSQGPGLMAQMAATAGGVAIGSAVGHAVGGMFTGGGSSHAAEQAPAP VAAQAQMAPQATTYSQPCEFEWRQFVECAQNQSDVSMCNGFNDIFKQCKARYA" gene <161406..>161468 /locus_tag="CAEBREN_31991" /db_xref="WormBase:WBGene00193956" mRNA <161406..>161468 /locus_tag="CAEBREN_31991" /product="hypothetical protein" /db_xref="WormBase:CBN31991" /db_xref="WormBase:WBGene00193956" CDS 161406..161468 /locus_tag="CAEBREN_31991" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45642.1" /db_xref="WormBase:CBN31991" /db_xref="WormBase:WBGene00193956" /translation="MAKRCTAGYESINTNSSKVT" gene <161522..>166768 /locus_tag="CAEBREN_31363" /db_xref="WormBase:WBGene00193328" mRNA join(<161522..161568,161982..162071,162144..162330, 162378..162770,163564..163805,164386..164658, 165482..165665,166442..>166768) /locus_tag="CAEBREN_31363" /product="hypothetical protein" /db_xref="WormBase:CBN31363" /db_xref="WormBase:WBGene00193328" CDS join(161522..161568,161982..162071,162144..162330, 162378..162770,163564..163805,164386..164658, 165482..165665,166442..166768) /locus_tag="CAEBREN_31363" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR017871 (ABC transporter, conserved site), IPR003593 (ATPase, AAA+ type, core), IPR005284 (Pigment precursor permease), IPR013525 (ABC-2 type transporter)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45612.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR005284" /db_xref="InterPro:IPR013525" /db_xref="InterPro:IPR017871" /db_xref="WormBase:CBN31363" /db_xref="WormBase:WBGene00193328" /translation="MTDVVTPITVTWENIEVKTRKKGKSLLNEVSGLAKPGELVALMG ASGAGKTTLLNVLMDRNMKGLDKKGTVRVNGKEIGQKISLISGFAQQQEIFVPTLTVD EYLMIQAKLRMQANKATRRERVDEILELLGLEKCRNSKIGNPGLVKGISGGEARRLTF ACELLSNPSLLFADEPTSGLDSFMAASVVQIMRNLANSGRTLITIIHQPTADLYFQFD KIIFLSLGQTAFMGTPEESIKFFTDCGHPIPQSFNPPEWIQSKLSITPNEEAESRERI EKIIECYENSDFTKEISADIVHTKIPPYIQNPGFFTETRALLKRAFIDVVRSPAQMRT KLIQKVIMGLFIGSLYWQQPLDRRGVQNTNSALYFLIAELTFSTMFGIMTFMEHELPL ISREYHDGLFYVLSYYVSRCLSYLPLFTVDGALMVLISYWMIGLNSTWQQVLKSILIA VLVEQSATSCGLFLACLFETTSVAIAFAVPASGLFALLSGLYGNTNNFPVYIQWMQWT SWFRYGFEGLVVNQWSEIDDPKWSTVYRDIILDQFSFKPDNYRLDVIGLASIVAFFYV AGYVALLVRIRISR" assembly_gap 163439..163448 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 165392..165440 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 168974..168988 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<169455..>169880) /locus_tag="CAEBREN_14305" /db_xref="WormBase:WBGene00153030" mRNA complement(join(<169455..169664,169749..>169880)) /locus_tag="CAEBREN_14305" /product="hypothetical protein" /db_xref="WormBase:CBN14305" /db_xref="WormBase:WBGene00153030" CDS complement(join(169455..169664,169749..169880)) /locus_tag="CAEBREN_14305" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45579.1" /db_xref="WormBase:CBN14305" /db_xref="WormBase:WBGene00153030" /translation="MVIYSRTVTFNISLPDRPTMQKMNSYIALIPLDGRTFGDIPQFG TIKEYEEEIKRCMKEINDLNMRGTSLFVQQVKIGFLCRDVKFLAEHLGQVYALEAIEA GLEGLKADYFY" gene <171514..>173478 /locus_tag="CAEBREN_01629" /db_xref="WormBase:WBGene00140354" mRNA join(<171514..171614,171702..171878,172408..172511, 173106..173182,173233..>173478) /locus_tag="CAEBREN_01629" /product="hypothetical protein" /db_xref="WormBase:CBN01629" /db_xref="WormBase:WBGene00140354" CDS join(171514..171614,171702..171878,172408..172511, 173106..173182,173233..173478) /locus_tag="CAEBREN_01629" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45759.1" /db_xref="WormBase:CBN01629" /db_xref="WormBase:WBGene00140354" /translation="MAPEHSGSSNSFGAPEMENIEDLDWEEYEQQILLIMKKLYDDAR LLQEAPPFEDEESYRKLVDRQLRNLMSYKHTLSKDQFDNQMRIFRDMCFTQVMGQHNR IEAKKEEARLKGEVYKYNVKKVDRDNLFTTATERLEFVQSQLEGFTPNVYPPTLEGKS EMALKMMEFYIYNDNFTKEEHMDFFRQGMVDRLLWDKTRFEAGHYPEFDSFEQLRDRY LEDIDMSKGLRRMFQV" gene complement(<173854..>175443) /locus_tag="CAEBREN_21681" /db_xref="WormBase:WBGene00160406" mRNA complement(join(<173854..174232,174519..174874, 174941..175282,175393..>175443)) /locus_tag="CAEBREN_21681" /product="hypothetical protein" /db_xref="WormBase:CBN21681" /db_xref="WormBase:WBGene00160406" CDS complement(join(173854..174232,174519..174874, 174941..175282,175393..175443)) /locus_tag="CAEBREN_21681" /note="contains similarity to Pfam domain PF00268; contains similarity to Interpro domains IPR012348 (Ribonucleotide reductase-related), IPR000358 (Ribonucleotide reductase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45534.1" /db_xref="InterPro:IPR000358" /db_xref="InterPro:IPR012348" /db_xref="PFAM:PF00268" /db_xref="WormBase:CBN21681" /db_xref="WormBase:WBGene00160406" /translation="MTLVEIQNVEKENAGVEPKHSSKKLKLEEELNKLSIVEKPKVEE TKEEVNALDANEPLLQDLDNRFVIFPLRYHEIWQFYKKAVASFWTVEEVDLGKDMNDW EKMNGDEQYFISRVLAFFAASDGIVNENLCERFSNEVKVSEARFFYGFQIAIENIHSE MYSKLIETYIRDEQERHKLFNAIFEFEFIKKKADWALKWISDQKASFAERLIAFAAVE GIFFSGSFASIFWLKKRGLMPGLTHSNELISRDEGLHRDFACLLYSMLQNKLTQERIY EIISDAVKIEQEFLTEALPVDMIGMNCRLMSQYIEFVADHLLAELGCDKLFKVKNPFD FMENISIDGKTNFFEKRVSEYQRPGVMSTETERQFDLEADF" gene <177066..>183243 /locus_tag="CAEBREN_13903" /db_xref="WormBase:WBGene00152628" mRNA join(<177066..177288,177342..177966,178015..178633, 178681..179303,179411..179943,180118..180485, 180556..181674,181738..182607,182654..182839, 182893..>183243) /locus_tag="CAEBREN_13903" /product="hypothetical protein" /db_xref="WormBase:CBN13903" /db_xref="WormBase:WBGene00152628" CDS join(177066..177288,177342..177966,178015..178633, 178681..179303,179411..179943,180118..180485, 180556..181674,181738..182607,182654..182839, 182893..183243) /locus_tag="CAEBREN_13903" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45588.1" /db_xref="WormBase:CBN13903" /db_xref="WormBase:WBGene00152628" /translation="MESSSIFKPYQDYHNVRGDKQIMIKNSIGRQLPYIVNFQKNTCQ IFDIELERVTHAFAFPDSCQLIDADYFPTADGEFGIIIGVEDTEKTWGSTNFVLGLTT EKHSPTMRVTHSLGLPERITVVKTLYSNDNMMDSKNLGLFPKLLTWPHIVAIGCKNCK CFLTQLSAVNGSSDVPIIHVAKRSPLDLLASFVENDLFIYTLEDSAYREYPRSGVYVS SLALMPRSRTLLVGLSMGGIIAASLNSSNQMAMLELRHERVVQAMAPLEPEDDPDKFE YFIAAVDRSPRHPIMLQLWRGAFPKDQCPDDQKYDRPSYSVCLEHKIMHGERWLSVKT IVQERSMDSGLRRRNDSSMDSTLLNSSQLFGCTFNRSNVFLAYSRQGAVMNSFEVEAA MFDIDAWYYKRVPGRVLTDGTALRQCPFMSCVKSEIDPNQVTDIGILTSDSTNMYRFN SMVSDADQLFYPSAVSYERVFVAFQTNISWMKIQNVQETILQKCASRLPWIVRTPDHM ATNIIAAGLVRKNILTGSPNASVTEELDKESQEKLSASLRVVLNSMIYYGKIEEFCAL ITRNDLSDKIKVEIAEWAFLEAIDFKRIVADRIVALFQGSTAALSPLAENTLHQGIKM FRIVHEYLRGCSKCVTEGGAALKNYTSSAKCMLNHTKLVHQFINSRIVPVNHSIELLM RQQHERRKNTALKNRTALPIQVTTRNMHRLASNAQFWNQMPHDEWYPPTPLDLLESVL NVSITERLKRDLIVQYILDWFRANPENTEYTDSQLAMEVIKTMSMQMLDVDLEKIYYI LEQEKAALTTPTTVVPVEEASTSKKVFSLEKDGLTYEQLWSDKIHLGWTIKPADLERF KQRMKAQEEDVEGTNKKKLFDPETEMFYQAFLCENQKYHLMSTEAIASNKLLLSFYPN ILADRGRHLQKSAQKKSAKEREVEKLVKEMFEKQNKRDMEEMPEVYAKMGEQEGVAGG GGGRKRKSEVFENREDVSPMSFMPPTAKRIQRRGATPTSADEPTIELDENQQKKNVEL NNLIATPARYYKRPAPVDLSSPTHIQKAPPVHHTNSILKTAKTIQSPGRGRIRFHASV RKGANESADEALDEENEAPEDAAAAPKINFAILEDEEEEPTYRRSSRDNSKTFEAQTP IPEGKTPEFEVLEDKVDEIEETTFEIQDDDDANFKSLEENATYEEPEEKVNVLEGIHE ESQKTEEIQMEIESVSDETEAPEEAITTNTEATEDYQEPEWDGIERSFEKQKDEDCDP TVCEDPVFLAPKNPAPSETKTSEPVEADDGSEDVDSTEDLARDIPLDRTFEVQEEDEE PKPRGDTPVEEPSETLLVEKPKIVKQKGRKTPPPVQTEQILEEEIARPPSANTRSSSR TTSRPPTPVEEPAPKPPKVTAKKTQIIEKSTEIQEEDVKSTMKKAAPKNITPEVAEDV SEAKKVEEKRPPSRTRRAVQKPSDSVEIDAPEVPEEEEPPKRPASRTRAARAKASEVV TEETAPERSSSRARSTRATSKAPEDPEATINKKTPESTIPEEKEEEVVRPASRNRRVV AAKKEGKPEPSTPTRSRSRSRTISEVVVPIQASEDVAKPTPRGRGRASRATTPSRNDT DLANTTITTKATKGGRKAASERPVTPTNEVDDDLNTTGASIQRRLCTRSVTRAASVQP ESSTPAPVATSTQRPTRGTVVNSAPTTPRRGRKPKAASESEVTVVVPSSGARATKRRN TPEEPDTPHGAATSSEPAKKSAKSTQSSRSRTTPLKSIPEAETPKTPKRGRSRTNSAS SNSATPSVPNTPKRGRKAAVSALEVLEEEIQEEEPPQPEVRRSARRLQQQQPPK" gene complement(<183929..>185246) /locus_tag="CAEBREN_13643" /db_xref="WormBase:WBGene00152368" mRNA complement(join(<183929..184070,184118..184532, 185183..>185246)) /locus_tag="CAEBREN_13643" /product="hypothetical protein" /db_xref="WormBase:CBN13643" /db_xref="WormBase:WBGene00152368" CDS complement(join(183929..184070,184118..184532, 185183..185246)) /locus_tag="CAEBREN_13643" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45691.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN13643" /db_xref="WormBase:WBGene00152368" /translation="MDSGEIDKPCFDWIVENTVGKVNTLKIYRTRIKDERAYTESLRG MANSLCLIGWYKEKNAPVVPYDLSFNVERLHINNEDWLSLNHLIDLSRRVKILSFDEV SLTSKMINDFLKLWISSELSIELSSLAIQGEGYEFRDLLAGIRYQISSMAEQKEERGW WVNENLNVSQHLFQAYKIKRNSGVEAHIIYVPKYRQHQLEAFQIRF" gene <185819..>187708 /locus_tag="CAEBREN_23147" /db_xref="WormBase:WBGene00161872" mRNA join(<185819..185822,186383..186597,187382..187494, 187543..>187708) /locus_tag="CAEBREN_23147" /product="hypothetical protein" /db_xref="WormBase:CBN23147" /db_xref="WormBase:WBGene00161872" CDS join(185819..185822,186383..186597,187382..187494, 187543..187708) /locus_tag="CAEBREN_23147" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45801.1" /db_xref="WormBase:CBN23147" /db_xref="WormBase:WBGene00161872" /translation="MEPAKKPVARSPLPPPIAPSSEIEELKKKMEKREEVKREVKKRI EEEERERERRKQEEEIRRETQELLAIRDVSSYLPKLGRRVNNFQYFRWDSDEEIPVIP EERAPSRNRLYSPAPNPSNSCELCTLALRSVDKSGTAPTKSAACAHVDAFVASSSTSY YHHNH" gene complement(<188061..>189886) /locus_tag="CAEBREN_06979" /db_xref="WormBase:WBGene00145704" mRNA complement(join(<188061..188292,189155..189538, 189765..>189886)) /locus_tag="CAEBREN_06979" /product="hypothetical protein" /db_xref="WormBase:CBN06979" /db_xref="WormBase:WBGene00145704" CDS complement(join(188061..188292,189155..189538, 189765..189886)) /locus_tag="CAEBREN_06979" /note="contains similarity to Interpro domain IPR007940 (SH3-binding 5)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45604.1" /db_xref="InterPro:IPR007940" /db_xref="WormBase:CBN06979" /db_xref="WormBase:WBGene00145704" /translation="MTEEGDDQLVSIRKQLENLNNATDDINSYEMKLEHVQKQFCETQ LMFNKEMSGIPKKLTKQISKSRPYFDLKTREPEIRKCVQQAAALFERQKTAVEMAREQ VQILHNSLNNNQESDAEKQYVEVIEQQLNLVREAEEECLKAERMHAARVRDLLQLEMA LKKLLQEHGSSIKKARPYYERKEVLTRTMNSQLELMSILENEVQLRKDSYSDSMRALE QISEQIHQERSSQSSLAQSSDAESDSS" assembly_gap 204646..204655 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 205848..207151 /estimated_length=1304 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(222474..222551) /locus_tag="CAEBREN_26925" /db_xref="WormBase:WBGene00187536" tRNA complement(join(222474..222511,222517..222551)) /locus_tag="CAEBREN_26925" /product="tRNA-Asp" /db_xref="WormBase:CBN26925" /db_xref="WormBase:WBGene00187536" assembly_gap 231709..232011 /estimated_length=303 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 237623..256052 /estimated_length=18430 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <261232..>266075 /locus_tag="CAEBREN_31786" /db_xref="WormBase:WBGene00193751" mRNA join(<261232..261546,265415..265807,266010..>266075) /locus_tag="CAEBREN_31786" /product="hypothetical protein" /db_xref="WormBase:CBN31786" /db_xref="WormBase:WBGene00193751" CDS join(261232..261546,265415..265807,266010..266075) /locus_tag="CAEBREN_31786" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45627.1" /db_xref="WormBase:CBN31786" /db_xref="WormBase:WBGene00193751" /translation="MNSSVLPMIDLSPGDADDADVDFRSIPCRASEDPENIPNLLFGN GNLCRSTLSINQISMAPSPFSEITVSSQKPLIVQRSGSNSSEHNALLKEVAKKKPVAD IAHKSTTASSDPGSLPTQPVKIQNLPLIPSFLSSSHQDQEPFNPSATSSSAIPKSSST GTMPRRPPLLRLAPVPEDLEEDDEVFLEDGRKAEDKQRLFKKRRFLSLLDSNDDVVGG GGGHNSIVDSDDEEQENKQLNLIPFESAHRELQFEYNHA" gene <278902..>290197 /locus_tag="CAEBREN_28573" /db_xref="WormBase:WBGene00190538" mRNA join(<278902..279042,280444..280526,281878..282100, 282142..282264,282613..282767,282818..282876, 283186..283493,284475..284811,285195..285300, 285878..286158,286493..286759,287497..287498, 287762..287921,290040..>290197) /locus_tag="CAEBREN_28573" /product="hypothetical protein" /db_xref="WormBase:CBN28573" /db_xref="WormBase:WBGene00190538" CDS join(278902..279042,280444..280526,281878..282100, 282142..282264,282613..282767,282818..282876, 283186..283493,284475..284811,285195..285300, 285878..286158,286493..286759,287497..287498, 287762..287921,290040..290197) /locus_tag="CAEBREN_28573" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR005821 (Ion transport), IPR003967 (Potassium channel, voltage-dependent, ERG), IPR000595 (Cyclic nucleotide-binding), IPR003938 (Potassium channel, voltage-dependent, EAG/ELK/ERG), IPR013099 (Ion transport 2), IPR014710 (RmlC-like jelly roll fold)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45636.1" /db_xref="InterPro:IPR000595" /db_xref="InterPro:IPR003938" /db_xref="InterPro:IPR003967" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR013099" /db_xref="InterPro:IPR014710" /db_xref="WormBase:CBN28573" /db_xref="WormBase:WBGene00190538" /translation="MSTSNNNHTGIIQHHISQPSQVPQTSGNAVTSQAKQLMVVLQSG SYKVLSLGADVLPEYKLQQTRVHHCTIVHYSPFKAVWDWIILLLVIYTAIFTPYVAAF LLRELQDTTKKSRFTEPLEIVDLIVDIMFIVDIIINFRTTYVNENEETGQVVSHPGKI ATHYFKGWFIIDMVAAVPFDLLLVSTNSDETTTLIGLLKTARLLRLVRVARKLDRYSE YGAAVLLLLMATFALIAHWLACIWYAIGSAELSHKEYTWLHQLSKQLTQPYTSTNGTV PTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFTIIMMILGSLMYASVFGN VSAIIQRLYSGTARYHTEMSRLREFIRFHQIPNPLRQRLEEYFQHAWAYTNGIDMNLV LKGFPDCLQADICLHLNRNLLSGCAAFAGSTPGCLRALSMRFRTTHSPPGDTLVHRGD ILTGLYFIARGSVEILNDDNNVMGVLGKDDIFGENPLLYDEVGKSSCNVRALTNCDLH KILRDDLLDVLDMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLRMSSSLNKDR HTTPPDGESRNPSAVRRSAESVSRCDSNPIDRRQSAGSRSSSRCSPPHAALTATRSEA TPLLRRPNIQHAEEDDALFDDIRAFARGNTVTLPGVTVPPGNSPTTVIQPPPPPQSNH MMNDGTHSQQLSELYKMQSKNSNFFSNFYFSSQIERMQNKFNSDMETLIKLVKDQAMA RNNGSSNEGDQYPRHRPNNYISSAIRLPNGGGGGVVEDMRVSRLSSHEPPTPTQESDT IL" assembly_gap 291714..291723 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 292855..292864 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<294207..>296190) /locus_tag="CAEBREN_32218" /db_xref="WormBase:WBGene00194183" mRNA complement(join(<294207..294485,294586..294723, 294777..295401,295623..295939,296158..>296190)) /locus_tag="CAEBREN_32218" /product="hypothetical protein" /db_xref="WormBase:CBN32218" /db_xref="WormBase:WBGene00194183" CDS complement(join(294207..294485,294586..294723, 294777..295401,295623..295939,296158..296190)) /locus_tag="CAEBREN_32218" /note="contains similarity to Pfam domain PF11977; contains similarity to Interpro domain IPR021869 (Ribonuclease Zc3h12a-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45632.1" /db_xref="InterPro:IPR021869" /db_xref="PFAM:PF11977" /db_xref="WormBase:CBN32218" /db_xref="WormBase:WBGene00194183" /translation="MSYDSIDLTKRKYPRDSGLLEDNASQCDVQNLTAVPEEPKSEIL ENLPPKSPEPSDVQPPAKIQRKNRRIDTSFVMQPVKKIEGDTPQRPFPKELYWYNPAV SGTATEIFDMLFKSSSQAKPKYTHANFSAPASALKIMKQARQKGLQTTTGTLKDQQKP RKQRKVLDSLQNTLWLIHAYKRDAVLEHNSRSTIQKFSCTRGDDGRLRILEKNDLSIV WNLSQREPDWQVKPVFIDGISIVDMASGSGSIGLPVLQVQLLIEILLHFIIDGHQVTL FLPEIYKTDSEKIDNSQVFKFLCTLDVIKFVNKKSRKAVEAEVLMEAEKTAGIICSNS DDIHTTLSVQCFPVLHKLSESNYKVSTVFARKDSSKNCRLYPKETAEIDTSIYQLTLE RQVFLICSLFHVTTFHGQRKQQIEVFLMIINRFLPEILPKFMEKSMITTVGESIEKLQ REQNLENWPIFLK" gene complement(<299254..>307505) /locus_tag="CAEBREN_10423" /db_xref="WormBase:WBGene00149148" mRNA complement(join(<299254..299441,300062..300203, 300286..300398,300604..300745,306325..306405, 306558..306685,307364..>307505)) /locus_tag="CAEBREN_10423" /product="hypothetical protein" /db_xref="WormBase:CBN10423" /db_xref="WormBase:WBGene00149148" CDS complement(join(299254..299441,300062..300203, 300286..300398,300604..300745,306325..306405, 306558..306685,307364..307505)) /locus_tag="CAEBREN_10423" /note="contains similarity to Pfam domain PF00076; contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45725.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="WormBase:CBN10423" /db_xref="WormBase:WBGene00149148" /translation="MQREQSPQDGLDGHEEARLNADSDDGSHGSQDPGKMFIGGLSWQ TTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLHARDHELDGK KIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMYDKAT QRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAAR NLYGMPPETLLAYAQYLPRFSGNLMYPTFGNVFQNMPGGYSGLSTPGGSSNRPPHQFD TASLYGLNNGGQHLALEAQTQMFMTPQSHYGHNKY" gene complement(<321957..>324918) /locus_tag="CAEBREN_07471" /db_xref="WormBase:WBGene00146196" mRNA complement(join(<321957..322068,322122..322241, 322793..322984,323080..323165,323683..323875, 324839..>324918)) /locus_tag="CAEBREN_07471" /product="hypothetical protein" /db_xref="WormBase:CBN07471" /db_xref="WormBase:WBGene00146196" CDS complement(join(321957..322068,322122..322241, 322793..322984,323080..323165,323683..323875, 324839..324918)) /locus_tag="CAEBREN_07471" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45541.1" /db_xref="WormBase:CBN07471" /db_xref="WormBase:WBGene00146196" /translation="MGNAKSTDSIPKKSTQRRKSATTPSTRSSSSSSRPSISSQGNNN NKLLSHSQKQIVRGCMDNSKDDLGERIVRRAMERRDDFKQFIENLSKVQRYENSNYLK QFLLGIVDNLTDIEEINRLAEEFGCIHVQFRANGFKPDFFACTADAVTTECTFLDQAA HPTSETASAWSMLTAHIFSRVRDGYYAELRRQRKSSNAFRARASVDVVSTGTDDGTSL SSATRRSNSPQEEIAENSEGDNNGTTNQSSGNFLAPPEDKNF" gene complement(322530..322601) /locus_tag="CAEBREN_26919" /db_xref="WormBase:WBGene00187530" tRNA complement(322530..322601) /locus_tag="CAEBREN_26919" /product="tRNA-Thr" /db_xref="WormBase:CBN26919" /db_xref="WormBase:WBGene00187530" gene <335600..>336793 /locus_tag="CAEBREN_04924" /db_xref="WormBase:WBGene00143649" mRNA join(<335600..335818,336530..>336793) /locus_tag="CAEBREN_04924" /product="hypothetical protein" /db_xref="WormBase:CBN04924" /db_xref="WormBase:WBGene00143649" CDS join(335600..335818,336530..336793) /locus_tag="CAEBREN_04924" /note="contains similarity to Pfam domain PF00412; contains similarity to Interpro domain IPR001781 (Zinc finger, LIM-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45596.1" /db_xref="InterPro:IPR001781" /db_xref="PFAM:PF00412" /db_xref="WormBase:CBN04924" /db_xref="WormBase:WBGene00143649" /translation="MFCVLHVENWRIHTLLLLVYQREKKMDRSIDRRLCGHCHQSIGS EALVAMNRLWHPDHFTCSSCKRPIKQTFQAADNHAYCVQCFAQKYNPKCAGCQETLVD TCLLALDRHWHPRCFTCSTCNRPLPNGEFYLVDDKPYDLDCHWAKRLEKREHMERGER " gene <337244..>341748 /locus_tag="CAEBREN_23261" /db_xref="WormBase:WBGene00161986" mRNA join(<337244..337386,337576..337665,338149..338659, 339115..339564,339723..339830,339876..340868, 340993..>341748) /locus_tag="CAEBREN_23261" /product="hypothetical protein" /db_xref="WormBase:CBN23261" /db_xref="WormBase:WBGene00161986" CDS join(337244..337386,337576..337665,338149..338659, 339115..339564,339723..339830,339876..340868, 340993..341748) /locus_tag="CAEBREN_23261" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45795.1" /db_xref="WormBase:CBN23261" /db_xref="WormBase:WBGene00161986" /translation="MENRNGRRNSILKTRVTVDVLSETVDNNVPAGPAQNRRVSFHNV KQIQEYDRHHGQMIEGTPIKEKITDTLGSDGILTPCGGHMDVTNMLEHNSTFQVFNNG GADMSLETTVAGGEEENHHDQTAHLLNVTRDKTVYYEEVVETTKTTKSKITKICGSSA GGASDDTMTLFNQTNLEEVDMSMDRPANDTMALFNQTNSDEVDMDMSQSATFAVPRMP RHQNKTLNRTLPMDLEEEEEESQMKKANETMNLFNVSNLENTDMDISNHPAQNSILQA HNDTISMFRSPAAKKQVFQKQVEMDIYQAQEPEEIGSEAMDISQAPPTPSHVTKNATL AMFEDDDDNMDITQNTTIIKETTVEKINENCHMDISSVTVTNPDVQSQTMALFESGAS PAREKMAVPTAISSPKDEDQSADATLKMFQSPARQAGVEMKMPTSTQKTMVFEESMDV EESTIHVESPKSPASEEQLATETTESSESPGSPESSQIQDSESTFHKSLNENSIMLEQ SLVEEERAAVLQNSMMEVLPRDEQEEELVDVRKEEAMEQDSMDVSMDISHQKTPQRSM HRPKSVQDASTIQNETSANLVEEEERKNESMVKTMQILTDTADVTHTIQEEETLKNRT SGHSDGQTEELQVKSTELGEEVTIQMAMEESVAQNQSQMSFNESYSIRNTSRRRRSLL RDTLVRESPRRLALENSMHISIHMPNHYEKEDGRLTALAEYRQNKSLLNASQEQMMNE SGSNLSMTTGAAASPGNGTRDIFAMNASIRSPRNTTINKSIDLNTPRVPSPISKDQSM VIPPESPFQPMPIYDPAVVNVLYLTADDGTAHPEATDFQKALMVEKLGLEKIQEVTIQ NSNLTKRDVRDLMLLAREEAEIQFLEFRLKFAMEQSQKQTRCIEELTSENSKMAEQIR DAQNLPEIKKEIEKLRIETTRYTKTEVHQIRQEYMYWRKKMFDAQMAALKHNYEVGRA IADQRAELRMEVEQLEERAAQIKEKNRQERRELVDQILKIMEEW" gene <342293..>343936 /locus_tag="CAEBREN_03730" /db_xref="WormBase:WBGene00142455" mRNA join(<342293..342399,342796..343268,343659..>343936) /locus_tag="CAEBREN_03730" /product="hypothetical protein" /db_xref="WormBase:CBN03730" /db_xref="WormBase:WBGene00142455" CDS join(342293..342399,342796..343268,343659..343936) /locus_tag="CAEBREN_03730" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45760.1" /db_xref="WormBase:CBN03730" /db_xref="WormBase:WBGene00142455" /translation="MLSIDEIFGTKFSYSLDLGQLESPVLPPLQLTTMPSQKKSNPTE VHISAGRDLVQRTLVFRNTTGKDFLLKLIASNEAVTFPTNVFRFPPLSHRVIQFRVNS SKISQWDKSKLTIKGYVVPVYAKNLKQFIDQKTTIGTPCQEAFTLAVKFTEQFSAPQT VINLPGGATCIEATDHPVDVEEMDTMTALNIERDVATAAPIGSMLGFVEEYKRGQKSK GCWLSNYICGGPEKEADNKPSMRSRRSSRSSRSGKSQASCRSQSRKKNKDVNVCLEAT PCGGSTIQA" gene complement(342465..342536) /locus_tag="CAEBREN_27460" /db_xref="WormBase:WBGene00188071" tRNA complement(342465..342536) /locus_tag="CAEBREN_27460" /product="tRNA-Ala" /db_xref="WormBase:CBN27460" /db_xref="WormBase:WBGene00188071" gene complement(343337..343408) /locus_tag="CAEBREN_27988" /db_xref="WormBase:WBGene00188599" tRNA complement(343337..343408) /locus_tag="CAEBREN_27988" /product="tRNA-Ala" /db_xref="WormBase:CBN27988" /db_xref="WormBase:WBGene00188599" gene complement(<344166..>347971) /locus_tag="CAEBREN_14284" /db_xref="WormBase:WBGene00153009" mRNA complement(join(<344166..344287,344472..344609, 347893..>347971)) /locus_tag="CAEBREN_14284" /product="hypothetical protein" /db_xref="WormBase:CBN14284" /db_xref="WormBase:WBGene00153009" CDS complement(join(344166..344287,344472..344609, 347893..347971)) /locus_tag="CAEBREN_14284" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45744.1" /db_xref="WormBase:CBN14284" /db_xref="WormBase:WBGene00153009" /translation="MSSSVCFVILLIGMVLASTATWQNVEDTGCAGVEGCDDAASAPA SNSGTASGEEETNNKFALLFRQMLAKQRETNMDCALSEDCPDAFECISGKCRSMGPRR TKMINLYSRW" gene complement(<348642..>362443) /locus_tag="CAEBREN_05496" /db_xref="WormBase:WBGene00144221" mRNA complement(join(<348642..348816,349962..350107, 350708..350932,351901..352147,352350..352471, 352611..352907,353689..353902,354333..354625, 355956..356091,356139..356278,356850..357095, 357616..357705,358036..358185,358375..358737, 358788..358893,362343..>362443)) /locus_tag="CAEBREN_05496" /product="hypothetical protein" /db_xref="WormBase:CBN05496" /db_xref="WormBase:WBGene00144221" CDS complement(join(348642..348816,349962..350107, 350708..350932,351901..352147,352350..352471, 352611..352907,353689..353902,354333..354625, 355956..356091,356139..356278,356850..357095, 357616..357705,358036..358185,358375..358737, 358788..358893,362343..362443)) /locus_tag="CAEBREN_05496" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR010926 (Myosin tail 2), IPR001609 (Myosin head, motor domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45557.1" /db_xref="InterPro:IPR001609" /db_xref="InterPro:IPR010926" /db_xref="WormBase:CBN05496" /db_xref="WormBase:WBGene00144221" /translation="MSYGGHDPKGYGVEDLVLLSTIDLKSVVQNLQLRFQKGRIYTYI GEVLVAVNPYRQLGIYEKNTVDQYKGREIYERAPHVFAIADAAYRSMKRFGRDSCIVI SGESGAGKTETSKIIMKYLAAITNVRQQGEIERVKNVLLRSNCILEAFGCAKTNRNDN SSRFGKYMHINFDYDGDPVGGNISNYLLEKSRVVRQQEGERNFHVFYQLVNGGDDNLL RQFGVAKDAKQYYFLNQGKSQKVASINDSRDFAEVQTALRSIHTFAKEDVESMWSVIA ALIHLGNIRFIDGDNSSGSVHISEKAALQNAARCLNVTPDELSKSLSSQVVAAHGDIV KKQHDVNAAYYTRDALAKALYERLFSWVVSKINEAISVKDNSRYSKSHVIGVLDIYGF EIFGTNSFEQLCINYCNEKLQQLFIELVLKQEQEEYEREGIKWVKIDYFNNKIICDLV EVPRTGILSILDEACAQIGNVTDKVFLGELDKKLKGHQHYTSRNLKQSDKSMGFEEFR ITHYAGDVTYSVMGFMDKNKDTLFQDLKRLLYHSKNRLVKSLFPDGSKSMAEVNRRPP TAGFLFKNSMSELVKQLAQKEPHYIRCIKPNEEKNSSIFDLERVEHQVRYLGLLENVR VRRAGFAHRMPYDRFVNRYKLICQATWPNPRRGQQLRDSCMQILESAGMAQDCVQGRT KIFIRSPQTVFRLEELRTEHLPQVVTFLQKMVRGVQARERYRRMVAVQKIIGAYRRYK LKSYIWQLINAFRDVRRMKDLGKSIRWPAPPLVLANFVTRLRVMHQRWRAATILARIP PHLRASLPQKIAAFEVLNNKKENWGYPRMWRGDYLSMQEELDLPASVSTYHDGIQALR QSHPFGKVLFSTYIQKFNKFNKSSLRVLIVTDRFVAKLETKKFKLLKEPIPLQAISRI SVSAESNGLFVIHVGDNDIVGCAKNMRNEERVGEMIGTLLAHYDKITMRRPPIIVQSA VVCTLGGKTRTIRVFDAENNNIPPVFKKNGNDVDLICHQLTAVA" assembly_gap 353064..353073 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<370444..>372996) /locus_tag="CAEBREN_32531" /db_xref="WormBase:WBGene00194496" mRNA complement(join(<370444..370553,371967..372113, 372894..>372996)) /locus_tag="CAEBREN_32531" /product="hypothetical protein" /db_xref="WormBase:CBN32531" /db_xref="WormBase:WBGene00194496" CDS complement(join(370444..370553,371967..372113, 372894..372996)) /locus_tag="CAEBREN_32531" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45611.1" /db_xref="WormBase:CBN32531" /db_xref="WormBase:WBGene00194496" /translation="MFAADDEPLVFLVRVPLDELEDDSTLESAYYHPRDIFQKRAIPF NGGMYGKRSTMPFSGGMYGKRSGGGHIYAERRAAIPFSGGMYGKRSLSQATQAYANNE NQIKRGAMPFSGGMYGR" assembly_gap 379106..379339 /estimated_length=234 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 384056..384065 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 386626..387487 /estimated_length=862 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <395485..>397162 /locus_tag="CAEBREN_25999" /db_xref="WormBase:WBGene00164724" mRNA join(<395485..395801,395985..396066,396131..396259, 397052..>397162) /locus_tag="CAEBREN_25999" /product="hypothetical protein" /db_xref="WormBase:CBN25999" /db_xref="WormBase:WBGene00164724" CDS join(395485..395801,395985..396066,396131..396259, 397052..397162) /locus_tag="CAEBREN_25999" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45803.1" /db_xref="WormBase:CBN25999" /db_xref="WormBase:WBGene00164724" /translation="MCITKKATKNQDKPLKKSSEESKNKKKVTPNQKKKFRVPMFARK KSKEEEPKIDKKTEEENKEKSINEEKVEVKNEQEEVNKNEEKVEVQKEPPRRPAINRP NIANPTSGLSGTQKKKTNKYKYGQIDREELSINNDKTEYLENAQLTKLMSHADVKALM NGQLVQGENGDDPNCQDTVEEVDDEMQDIAFSPLLAIIPPEDDKALGGVERG" assembly_gap 401600..401609 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 407411..407671 /estimated_length=261 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <411038..>411748 /locus_tag="CAEBREN_23704" /db_xref="WormBase:WBGene00162429" mRNA join(<411038..411097,411313..411440,411489..411597, 411644..>411748) /locus_tag="CAEBREN_23704" /product="hypothetical protein" /db_xref="WormBase:CBN23704" /db_xref="WormBase:WBGene00162429" CDS join(411038..411097,411313..411440,411489..411597, 411644..411748) /locus_tag="CAEBREN_23704" /note="contains similarity to Pfam domain PF03226; contains similarity to Interpro domain IPR004910 (Yippee-like protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45599.1" /db_xref="InterPro:IPR004910" /db_xref="PFAM:PF03226" /db_xref="WormBase:CBN23704" /db_xref="WormBase:WBGene00162429" /translation="MKVLENSSKHNTPKKQKTFQHYLPPGDRCYSCIHCRANLAAHSE LISKSFQGSQGKAYLFNAVVNVGCGPAEERVLLTGLHAVADIFCEICKTTLGWKYEHA FESSQKYKEGKFIIELAHMVKDNGWDEQNDS" gene <412943..>415271 /locus_tag="CAEBREN_17241" /db_xref="WormBase:WBGene00155966" mRNA join(<412943..413046,413684..413895,414759..414863, 414912..415014,415062..415173,415221..>415271) /locus_tag="CAEBREN_17241" /product="hypothetical protein" /db_xref="WormBase:CBN17241" /db_xref="WormBase:WBGene00155966" CDS join(412943..413046,413684..413895,414759..414863, 414912..415014,415062..415173,415221..415271) /locus_tag="CAEBREN_17241" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45827.1" /db_xref="WormBase:CBN17241" /db_xref="WormBase:WBGene00155966" /translation="MKNPKKGGVLTTKYTISNPTDSPELSNAEKIELEKWTPSTSSNI PDSSATSPPFDQIQVLDPLPNAPESSTCEVERKTTMLGFSSFLIAAKSVTFIVYLVLL IVSVILLHPSFFYTILAFGCAELVLILITVYHGIRPTLKVVFAMLSFEMALSLVKLVF AIVMMAKDGGQDCSVEHPCALLNISEAERFGLFFFILVTAFLDGLTALLTIANSPQMH EFELGDEYLF" gene complement(<415823..>417401) /locus_tag="CAEBREN_24123" /db_xref="WormBase:WBGene00162848" mRNA complement(join(<415823..416016,416141..416327, 416384..417189,417236..>417401)) /locus_tag="CAEBREN_24123" /product="hypothetical protein" /db_xref="WormBase:CBN24123" /db_xref="WormBase:WBGene00162848" CDS complement(join(415823..416016,416141..416327, 416384..417189,417236..417401)) /locus_tag="CAEBREN_24123" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002454 (Gamma tubulin), IPR002452 (Alpha tubulin), IPR002453 (Beta tubulin), IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase domain), IPR004057 (Epsilon tubulin), IPR002967 (Delta tubulin), IPR018316 (Tubulin/FtsZ, 2-layer sandwich domain), IPR013838 (Beta tubulin, autoregulation binding site), IPR017975 (Tubulin, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45644.1" /db_xref="InterPro:IPR000217" /db_xref="InterPro:IPR002452" /db_xref="InterPro:IPR002453" /db_xref="InterPro:IPR002454" /db_xref="InterPro:IPR002967" /db_xref="InterPro:IPR003008" /db_xref="InterPro:IPR004057" /db_xref="InterPro:IPR013838" /db_xref="InterPro:IPR017975" /db_xref="InterPro:IPR018316" /db_xref="WormBase:CBN24123" /db_xref="WormBase:WBGene00162848" /translation="MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL ERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWA KGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP DRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLT NPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAK GTQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQ NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRK AFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATAEDDVDGYAEGEAGETYESEQ " gene <420193..>421896 /locus_tag="CAEBREN_10932" /db_xref="WormBase:WBGene00149657" mRNA join(<420193..420295,420339..420477,420585..420686, 420741..420852,420905..421090,421138..421565, 421713..>421896) /locus_tag="CAEBREN_10932" /product="hypothetical protein" /db_xref="WormBase:CBN10932" /db_xref="WormBase:WBGene00149657" CDS join(420193..420295,420339..420477,420585..420686, 420741..420852,420905..421090,421138..421565, 421713..421896) /locus_tag="CAEBREN_10932" /note="contains similarity to Pfam domain PF12251; contains similarity to Interpro domain IPR022042 (snRNA-activating protein complex, subunit 3, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45822.1" /db_xref="InterPro:IPR022042" /db_xref="PFAM:PF12251" /db_xref="WormBase:CBN10932" /db_xref="WormBase:WBGene00149657" /translation="MDRKFNSDEQWYISPLLELRAIREDLLGSRENAEDTIDRKIRNA EEKTEKEQETEMWMESMMTEENVTEEEALEAIEEVGNLDMFLGPSDLHVRKLEEMKGD PDFLKKSVLHTHEHVAKRTEQIKQSRQRKSQYVTSLKYDKYLLNGGENTAFYRPQCSL TEKCDDDIVIVVDVITAYNRQLESAELRSSRLLKPQTKFLLRGDTLLWDLRQRLHCIS DTIFPLENGKELEGADLAQTTASKFPSSFIFIHDTFYVDSAHPNADDISFPIRQFMQQ RKIFDTVEPQVMEGVRIVDLNLRLGQPYVFQHSGNCEHLLIFHDLRLLHETDPQGIEK YPFVLFDRGSERKCDFCKKGHVEFVVERHELLPNTYTYFCRPCFQEYNYVHGMKTHSF NAWPYTETQKAENNGWPFDMPEDDN" gene <422051..>423753 /locus_tag="CAEBREN_16197" /db_xref="WormBase:WBGene00154922" mRNA join(<422051..422365,422415..422697,422840..423265, 423467..>423753) /locus_tag="CAEBREN_16197" /product="hypothetical protein" /db_xref="WormBase:CBN16197" /db_xref="WormBase:WBGene00154922" CDS join(422051..422365,422415..422697,422840..423265, 423467..423753) /locus_tag="CAEBREN_16197" /note="contains similarity to Pfam domain PF09734; contains similarity to Interpro domain IPR019136 (Transcription factor IIIC, subunit 5)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45781.1" /db_xref="InterPro:IPR019136" /db_xref="PFAM:PF09734" /db_xref="WormBase:CBN16197" /db_xref="WormBase:WBGene00154922" /translation="MDAFLNFNPPKKEEPKQLILIKYPGIIKNVDKALQTMGGLQLIA QSHFNNHSLELSHTPDNPYTSRIMAERKSQDNISSGTLHLVMKVKRKKKDPKVVKTEF LGLINTVYSFDVMCDFQYLPLKKRIGADAFEDMIPKLIPTDLSSALSWWESQQPQQTA LFLPPYQFSRYLTPSNKILGRETDHTEKTRRGARSGYGQNLRVERKALSITVMAMDDF PTAPTDEAVTDALFRCKHDEPHRLLKELFDERPMWTRVGLLYRTRIDDSLLRAILQKY AFYIQSGPWGRLWCKFGYDPRMERDGGLYQTLMVSFRQHGNIPERQRLKVSSDRAQTI NPNPDVNEPVSYTYEQGKLPRVRQMWYCVMDVLLPQAQQELIESQVASIGTLQPTVEE VREKGWLPPNVLDRIRDLIKEDVAKTSQELEYLMNDTNQADEDF" gene complement(<423966..>425739) /locus_tag="CAEBREN_00247" /db_xref="WormBase:WBGene00138972" mRNA complement(join(<423966..424095,424421..424835, 424884..425108,425420..425613,425669..>425739)) /locus_tag="CAEBREN_00247" /product="hypothetical protein" /db_xref="WormBase:CBN00247" /db_xref="WormBase:WBGene00138972" CDS complement(join(423966..424095,424421..424835, 424884..425108,425420..425613,425669..425739)) /locus_tag="CAEBREN_00247" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45692.1" /db_xref="WormBase:CBN00247" /db_xref="WormBase:WBGene00138972" /translation="MVKLLLLPDLARREILIDFDPIQIVELSLLSRRAQGLAHREAQS PIMRKTLTMSVSDCDRKREIVMFFQNCGYHFRIHKIGGRKMKGCYLNGFVTGRRDDNA TDVNERPLISFDSYWDDAVKGLNEMVKYISILFNYPEVSSLWSGNNNLPLTQWVIEKM ERKVKFYEINVRGINVTHAVMKTHLNSCESAYDRIYFAAKTTRNFQYNFDFNARELTI EFSNWITFNNIVQLSDQVESLSLRETYSTHQDLNNFLKYWLSIRTTIKMCHLVAYPKD LNVDELFQGIAKVPRENPESSIVIITVQGHFDIHREDGAKATIFAARRYYRSPAPFGM YIWPSESTQN" gene complement(<426078..>429556) /locus_tag="CAEBREN_01169" /db_xref="WormBase:WBGene00139894" mRNA complement(join(<426078..426179,426229..426732, 427100..427217,427273..427539,427698..428026, 428124..428331,428383..428908,429068..429380, 429428..>429556)) /locus_tag="CAEBREN_01169" /product="hypothetical protein" /db_xref="WormBase:CBN01169" /db_xref="WormBase:WBGene00139894" CDS complement(join(426078..426179,426229..426732, 427100..427217,427273..427539,427698..428026, 428124..428331,428383..428908,429068..429380, 429428..429556)) /locus_tag="CAEBREN_01169" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR011545 (DNA/RNA helicase, DEAD/DEAH box type, N-terminal), IPR004589 (DNA helicase, ATP-dependent, RecQ type), IPR018329 (DNA helicase, ATP-dependent, RecQ type, N-terminal), IPR014001 (DEAD-like helicase, N-terminal), IPR001650 (DNA/RNA helicase, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45787.1" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR004589" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR018329" /db_xref="WormBase:CBN01169" /db_xref="WormBase:WBGene00139894" /translation="MSTNKRNLETITIDDSDEEDQKEPVAKKPTTSNYNAWAEIFNKK KAEASATAAAERVKKEAEKEQQRQKLRDAVNERKRREALIANGNKSKIGAEKSEKSMN PDKKPVKDTKTSFKTPILSSTKSEDSPGPSDSQVTLDSQDSGDFVANPLAIGTGERLI RGQDIIERRDKVFLELFQHKKYRSRLQMQAINCILKRKCDVYVSLPTGAGKSLCYQLP SIVHGGVTVVVSPLIALMKDQIASLRRKGIPCETLNSTLTTQERSRIWAELGRDKPTI RMLYITAEGCATEGIKKLLGGLTKREVLRYIVVDEAHCVTQWGHDFRPDYLTLGSLRD VCPGVPWVALTATANAKAQDDIAFQLKLRNPESFKAGTYRDNLFYDVCMRDHLPTAPE NHMASFINKCLTIDAKTNGISSNQTKNEKSGRANHKRTFTGSAIVYCRSRNECEQVAK MLVIAGIPAEAYHAGLGKKDRNDVQEKWMNNEIPVVAATVAFGMGIDKPDVRAVIHWS PSQNLAGYYQEAGRAGRDGKRSYCRIYYSKQDKNALNFLVSGELAKLREKAKKNNADG EKAAMQIKSIQTGLQKMLDYCESAKCRHVSIASFFDDTDCQPCKTNCDFCRDPAKTQR SAEAFINSEESTGRSMFRRPGTSSGESGFGTVYGGGRRGGETEDELLSSASTSKDAVE RMEHEEAKRVRGIIDNEFAKRRRQAPPPPRAARGSQRVEPATDVSVIKPEQNVIKNVT LESRENWVRFLIRALETNWIVTGPPAGTTIKQCAEQLEYGMYSISKNETTYKNKCGHK LAEIKKLTAKCNPFIYTNTAVEQNGFVKAADLA" gene complement(<431262..>436168) /locus_tag="CAEBREN_11532" /db_xref="WormBase:WBGene00150257" mRNA complement(join(<431262..431397,432015..432154, 432204..432377,432428..432687,432813..433122, 433742..433963,434058..434448,434503..434956, 435359..435657,435945..>436168)) /locus_tag="CAEBREN_11532" /product="hypothetical protein" /db_xref="WormBase:CBN11532" /db_xref="WormBase:WBGene00150257" CDS complement(join(431262..431397,432015..432154, 432204..432377,432428..432687,432813..433122, 433742..433963,434058..434448,434503..434956, 435359..435657,435945..436168)) /locus_tag="CAEBREN_11532" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45589.1" /db_xref="WormBase:CBN11532" /db_xref="WormBase:WBGene00150257" /translation="MCLLFNRVVDMENPERHTVYLVVSLFVTFLSNKNSTPTDEKANA KKQSLVFRHFNTLLGYSSTEKCFTIPPARLRKAAVCNAFISGLPEILDMNLHTGNQLL PTVVQLLIHLPSPQKLASDQNVTNYSLALLTQHTRHLWLQSLILILYKYRFDQLPVSD NIMRLIGIVVKTLQNQVHECSEGEQSTEIDTWDEIEEDDTGRPELIRPESLTVTTIKE ATPAAEGIVQVGAVRVMQPTIVEPEGLAPEPMIARKRSTIVQEVKRKKSAIEIVKKSC TLRCGHCNEAIEMFDEETVSLCLIALETFLHREPSMAAPILFKILYTVTRLIDTPMYP WHSTEMFVPANSRSVAKQMLRVSLHHLSTSAICLQLFDTKIPRPDAFWAVIALSLADF PELSPVYFIQILLEDLEESWPGSVRLIMKNLAFYIVEISTDMYNQPWVNLVGHLETFF KRYHTAISVDNANPPTRAEIENVIVVMSHVLKVQTFNSSKCPVALVEAFAKWLSESLH GAEVSLEALLGVCTACNRALIRERDKQCVTRAVVTELMQAIKFKAKLHEANYVTIANM VLQDAGEDIEVALLDDQFNTAASEAIRPFLFEVLDFIADLHVIAKLKKESNSDSLGGD LKVKLAEAIAVEMSRSNARDCRTVIRFIPWLMSPPSVTQAAPGAFADSVTNVRVLSWL LLGALHANHSCLPVPIECSQHMADYIHFVLAGFADQSKQSVVHMSALFHAFHLCQLWT VYCERAATYSSATAFAHLIDFWARVTPAILQLLSHSKVLADMVNLHFLNTIQALQQVN SALLCQLYSMWAPILTAYHSQIPNQLRMKLDSCQNQPSLEAPLVTEWLKKVRYKISQV ELQTSAASPYYTV" gene complement(<437691..>466004) /locus_tag="CAEBREN_00341" /db_xref="WormBase:WBGene00139066" mRNA complement(join(<437691..437983,438699..438857, 438971..439169,458057..459019,459066..459148, 459200..459515,459564..460142,460556..461092, 461567..461739,461812..461926,461970..462258, 464293..464410,465998..>466004)) /locus_tag="CAEBREN_00341" /product="hypothetical protein" /db_xref="WormBase:CBN00341" /db_xref="WormBase:WBGene00139066" CDS complement(join(437691..437983,438699..438857, 438971..439169,458057..459019,459066..459148, 459200..459515,459564..460142,460556..461092, 461567..461739,461812..461926,461970..462258, 464293..464410,465998..466004)) /locus_tag="CAEBREN_00341" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45836.1" /db_xref="WormBase:CBN00341" /db_xref="WormBase:WBGene00139066" /translation="MKISAKIRTLSEFQIRLSTNQQPPSNAEIITTLRYFQQTLIGFL KDFPATQTNYCEKYSSDAARWNLYPNLNYSALYYAIVNLLDVFPLITSQPQAIGEAIL DTIKALMIFLDRDSLEQLPLLLASQLGVFPRELDKQIVHLLADCVFPFSICDDTYVKL SVPGVMMLVLQQTHDPSLHTWIVESAMNCSKGVYQDLLQVIAKGTCESRVAAANLLFH YWPFPNPQILHRKTIQYRVHAWRTIQCQSTGCSDKSSSVKRCYDPVICADVADTSPPI FLCRKCAEQVTGERKVVTQHIAQPMPASNATCQRQECQSQSRLAVTICCSHECTRGHN HVPMRLCMDCSSLVHEEGAIKHLQHQGSGVVWSTDDQWPTVESIVKLLRETTMFEGSE GEGKKPKWLRQLDGGTSMGKEIDKMADERRMLSRFGVWLMAALCPPNESADPRAIGYI MQNVFEWFATTALLPNDSMGASLEQLKTDFVSDWINIGMRVHNTVFISSLCGHCEEHD GRPVIDQIKEGLGRLLALMPYDVISLETWSKVMPRWLEAIVNDCTEDNQPELKVLLCK IFEPDLCPLPFETVEVYGFMTDRIGGDDYDEMFNALQWLHQLSRLDITIPLVMILDNF NRCLQKLRSIDIPPLSENDLEDEEMSVHVVLVDTLVLQMKLNDSERTMTPVLTDKLFE CMQLLISIPIRAVPHSCHDPELDGFADCQQCQQTAFVQQMVMNITQKVCPKREVAIIT TVDEDIAYDEQTADTPTAPGSSLLSPLTENGSKGTSPGTSAPSKPFPDNLQTQTMCVA QACEEEEEVEECEFVGILPCEEMEVAMAEAVTHDNVLETGQVVTSTTVHPSIKGQIIQ TPQTPVQKQPPTDFWVTSVGRFRFSFEQLPSQLKMINSLLSCLDVAVEPDVEFFIMSS LKYLCLHCEALSNARREHRGFLIWTQENQMVPKLWERLRFDYIQVGELATHLLLHAMT LPCGEEMFWKMVHRDFTSPEWSVRFDAVGKAYVLAQMIKTAPVKANKVVQTCLSSVFY HFIASLHDPNPSVAQRAIIALRAMPSHTLKLMCMCFESQFDHCIVDRPLIIHAITMMS ILLPDQTTLTFDFFIQRFETLVLESQLSSQTEENIFVQDLMHTDPMSELYQRKVSKAR TAIENAATARSIVRHLKQYDGMKHQLAHLPSDPDIHLSSRVARWRRRGRLSEAALSAR VKILKVVTMVRVVNRWRDMAADVALGAVSLVSMMTSGGGAAAAGLMCMWCTPFNFENC MLGTEFFPIFFCFA" gene <440266..>442183 /locus_tag="CAEBREN_16881" /db_xref="WormBase:WBGene00155606" mRNA join(<440266..440462,440636..441383,441971..>442183) /locus_tag="CAEBREN_16881" /product="hypothetical protein" /db_xref="WormBase:CBN16881" /db_xref="WormBase:WBGene00155606" CDS join(440266..440462,440636..441383,441971..442183) /locus_tag="CAEBREN_16881" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002900 (Protein of unknown function DUF38, Caenorhabditis species), IPR001810 (F-box domain, cyclin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45838.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR002900" /db_xref="WormBase:CBN16881" /db_xref="WormBase:WBGene00155606" /translation="MSSVSRYIDIDLRVRILQESFKMKPAYESYKNLCKDIGDTRLTF ENFEFWFYGFSNKQFYLDYEPSSEPDSHTLNDLPYDIVLKVVGYIDKSDRSNVRKVST YFKSIIDELCPCYEEIKVTLRHGFISAKYDELCNEYRKTDTGCTTVMNGKDIIVEGDY LTVFMDHFAATIQNKDLELKKLLIDAQPRSEEKPLDPIDFERFTRLMRTLKKPNNHQP LNIQVLHLIGMKLDVSCHIMSLAKPGLLNTIAIWSSYKTDNYEFIYKKMMGMEQWRQA MALSFLGHEDSPAGDLAHAQQFQLGRSKMTPAEIIQLRERLLEHKTFHYCEIKFPPSY DYTEIKTALRGRHNNNDKWYFKIPNSHQCLEFSFINDPSSLRIRRINFILP" assembly_gap 450808..451868 /estimated_length=1061 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 453380..456059 /estimated_length=2680 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 456819..456828 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 457548..457589 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<472245..>473630) /locus_tag="CAEBREN_15925" /db_xref="WormBase:WBGene00154650" mRNA complement(join(<472245..472253,472884..473067, 473111..473268,473376..>473630)) /locus_tag="CAEBREN_15925" /product="hypothetical protein" /db_xref="WormBase:CBN15925" /db_xref="WormBase:WBGene00154650" CDS complement(join(472245..472253,472884..473067, 473111..473268,473376..473630)) /locus_tag="CAEBREN_15925" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45556.1" /db_xref="WormBase:CBN15925" /db_xref="WormBase:WBGene00154650" /translation="MSKNILPSTPDTLPIYIAEKLEALGRDTKEADLNEIRVLLFMNQ EERVVTDEELQEWKKSEKKILEKQDDYKKSTENIEKKAKYDLPLGMIITMLIKLCLKI SQYILGVEYTGGSPRLASWWPIDFIVVAVYLFHFHGSDLRLKFLTVQPVQHEVFENED DDWEDSMTSTELQSRQKAVLNRWRQLKKEREENLDSGSWGH" gene complement(<474400..>475539) /locus_tag="CAEBREN_21951" /db_xref="WormBase:WBGene00160676" mRNA complement(join(<474400..474636,474685..474871, 475076..475227,475285..>475539)) /locus_tag="CAEBREN_21951" /product="hypothetical protein" /db_xref="WormBase:CBN21951" /db_xref="WormBase:WBGene00160676" CDS complement(join(474400..474636,474685..474871, 475076..475227,475285..475539)) /locus_tag="CAEBREN_21951" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45587.1" /db_xref="WormBase:CBN21951" /db_xref="WormBase:WBGene00160676" /translation="MSKDIVPSTPDTLPIFIAGKLEALDWDTKDADLNEIRLLLYTYQ EERMISDEELQEWKKSEKKILENQNNYKKITKRMEEDAKYFLPLGMIITMLIKFGFKI LQYILQVEFPKEFLSVWSIMDFIVVAIYLSYFHGSDLRLKFLTAKPPVQPEVLENEDD DWENSMTSTELQSTQKTVLNEWRQLRKERKEYVESSFLMSFVHCVIIFYCFIRLFAIK IVTLDESIKFFSCSTSLEKLFLCVEYIFTVIILTLFLLQKNLWRKKSNEDENSNKKSN " gene complement(<476762..>479084) /locus_tag="CAEBREN_17743" /db_xref="WormBase:WBGene00156468" mRNA complement(join(<476762..476953,477001..477138, 477479..477743,478503..478729,478777..478972, 479023..>479084)) /locus_tag="CAEBREN_17743" /product="hypothetical protein" /db_xref="WormBase:CBN17743" /db_xref="WormBase:WBGene00156468" CDS complement(join(476762..476953,477001..477138, 477479..477743,478503..478729,478777..478972, 479023..479084)) /locus_tag="CAEBREN_17743" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45830.1" /db_xref="WormBase:CBN17743" /db_xref="WormBase:WBGene00156468" /translation="MFDRWPVDLIVVAIYLFHFHGSELGLKLGTSNPVQPEVVENEEE DEDDDWEGSMTSTELQSRQKALLRRWEPIMEERAERLEPSGWLFFARLLIMIYFFIHV FHIIECSKYPFSLPIGELLLFLAEYPSTSLIPLLLLIQLFIEIMETSHSSKKKPTIAN SKTLNMPKYLVPSTPDTLPLYIARKLDALGSFPNEEGLDAIRILLYTYQEERVISDEE LQEWKKMEKKILAKQNTYKENTETNEKYAKYDNENEDDEDDWEGPMTSTELQSRQKAL VRKWETIMKERAKRRGSSDLFFFALPFFMFYFAIHFIQIFGCSTLRRSSWFPLPTGEL LLLFAESISTLLIYGLLFLRFLVEG" gene complement(<480593..>481616) /locus_tag="CAEBREN_08133" /db_xref="WormBase:WBGene00146858" mRNA complement(join(<480593..480838,480919..481111, 481158..481306,481353..>481616)) /locus_tag="CAEBREN_08133" /product="hypothetical protein" /db_xref="WormBase:CBN08133" /db_xref="WormBase:WBGene00146858" CDS complement(join(480593..480838,480919..481111, 481158..481306,481353..481616)) /locus_tag="CAEBREN_08133" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45832.1" /db_xref="WormBase:CBN08133" /db_xref="WormBase:WBGene00146858" /translation="MSEDPIPYPELIPRTLPILINEKLDALGSGLKKADLDAIRELLS VYQEDRVLSEEEVEEWIESERKILENQSDYKNESKNIVKRGKCSCWFCLFFTLLILFC FYKAVSPEYDFYLKLLFRWPIHFVAILIHCLHLYISTRRVSKPVQVLENFDDDWRGSL TSTELQSRQKALVNEWAQLLKERIKSRRLVIPVSQYFDNVGRKIAQFINWFYFFIRFS LITDILFNKEELSVFFFLFEQSDVLRYIEFFFTCSFPAFFFYQLGIMVKIEERNDDDM PISIIFD" gene complement(<482481..>484961) /locus_tag="CAEBREN_10172" /db_xref="WormBase:WBGene00148897" mRNA complement(join(<482481..482681,482732..482915, 483257..483414,483808..483941,484931..>484961)) /locus_tag="CAEBREN_10172" /product="hypothetical protein" /db_xref="WormBase:CBN10172" /db_xref="WormBase:WBGene00148897" CDS complement(join(482481..482681,482732..482915, 483257..483414,483808..483941,484931..484961)) /locus_tag="CAEBREN_10172" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45707.1" /db_xref="WormBase:CBN10172" /db_xref="WormBase:WBGene00148897" /translation="MRKAKSKQRFHVVQDERVVSDEEVKEWKRTEKEIREKQNSRWLR RERRIKEADHELPILLLLVLIIKAGSVVLRSVFQVKFSEFNLQLLSCWPVDFIILPLY LICLYGSGRFKIGIPEPVQPEVFENEDDDEWEDSMTTKELQSRQKALVNRWSTLEKKP VEHLKLNFWCSLVRFVNMTYFLVRVGVIAWPITENLSEFFLYSTKSEILFVLVEYISS AAVSTFCLVPIIDEILL" gene <486945..>487406 /locus_tag="CAEBREN_19004" /db_xref="WormBase:WBGene00157729" mRNA <486945..>487406 /locus_tag="CAEBREN_19004" /product="hypothetical protein" /db_xref="WormBase:CBN19004" /db_xref="WormBase:WBGene00157729" CDS 486945..487406 /locus_tag="CAEBREN_19004" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45823.1" /db_xref="WormBase:CBN19004" /db_xref="WormBase:WBGene00157729" /translation="MAKLLIQNFDAVHFEPLIPITLNNLLMMNAQFILSEVPKLSDKG LNMYIRLWLKNRSSKLEYLKLDFYRLLHVPNENQQIRILNENLIFKGVDYIERSRNSR RLFEFSFDFDPSSYSQWKVINGGFDIKRQDGTMCTVLINSNYSSFEMFVWP" gene complement(<488942..>490077) /locus_tag="CAEBREN_22009" /db_xref="WormBase:WBGene00160734" mRNA complement(join(<488942..489253,489404..489590, 489637..489770,489823..>490077)) /locus_tag="CAEBREN_22009" /product="hypothetical protein" /db_xref="WormBase:CBN22009" /db_xref="WormBase:WBGene00160734" CDS complement(join(488942..489253,489404..489590, 489637..489770,489823..490077)) /locus_tag="CAEBREN_22009" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45833.1" /db_xref="WormBase:CBN22009" /db_xref="WormBase:WBGene00160734" /translation="MSKELVPSTPETVPTLINRKFYDLFGEPGEDELNSIRELLNVVQ EERVATDEEVQGLKKLEKKVLEDQNNYKKDTEHSIIKAKNSVDLIFLLTLLVFVCGYI SKLTRFRVVVYWPIDLIVVAIYLYSLYGSWLGSKLGICKNVESEVLENEDDNDWQDSM TSTELLSRQKALVNGWEQVQKERKELLKPNFWPFIARFLNMVYFGLRVYAIHRVEKEP SLFVSSFFTEPTSLDVQCILSIVLVIYFFIDFLVENDRMQNLILQILGFIILLFIFTL LDVVFEKIMSSKKSNMPEM" gene complement(<494522..>495505) /locus_tag="CAEBREN_17116" /db_xref="WormBase:WBGene00155841" mRNA complement(join(<494522..494586,494646..494809, 494854..495014,495245..>495505)) /locus_tag="CAEBREN_17116" /product="hypothetical protein" /db_xref="WormBase:CBN17116" /db_xref="WormBase:WBGene00155841" CDS complement(join(494522..494586,494646..494809, 494854..495014,495245..495505)) /locus_tag="CAEBREN_17116" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45802.1" /db_xref="WormBase:CBN17116" /db_xref="WormBase:WBGene00155841" /translation="MLKDLIPSTNDTFPTFIYRKLNTLGSNPTKSDLDFINELINEPV QEEERVVPHEEVQEWKKLEKKALNDQNSYKKETKIMTKTEKYLIRFSFSLLLLVCFCW KILPYMLEDDENSEDPMLLLLSWPIDFIAVAIYIFCLYGSNLGALKPVKHQVLENEDD DDDWQDSMTSTELLSMQKVLVNEWNKLEKERTEQLARLRTLHGHGLLRFPCLCDPS" gene complement(<496270..>497539) /locus_tag="CAEBREN_22415" /db_xref="WormBase:WBGene00161140" mRNA complement(join(<496270..496587,496635..496785, 496835..497013,497069..>497539)) /locus_tag="CAEBREN_22415" /product="hypothetical protein" /db_xref="WormBase:CBN22415" /db_xref="WormBase:WBGene00161140" CDS complement(join(496270..496587,496635..496785, 496835..497013,497069..497539)) /locus_tag="CAEBREN_22415" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45839.1" /db_xref="WormBase:CBN22415" /db_xref="WormBase:WBGene00161140" /translation="MYINIVITRMTRKTIDEVENLWKERHLSSLLLFSHRSPRNWILM LIHTRSLFGKSRNFFSFIHKFILSDFFAMSKEFVLSTPIIFPYLITRKLDTLSAKPKE VDLNAIRELLDVVQQERVVSEEEVQEWKILEENILENQNNYKNETEEINNIMKYSKRF YWCYTYPAMFCFCILEILTDEHFLGAMYKTPIVFFNYLLSWPVCFIAVAIYLYYSYGP TPVLVLSNLKVYLQNSMTSIELQSRQEALLNGWEQLRKERKKVLESDTRSFIVRFANI IFFASRLTVCSSLMKEESIFFRTELELTETQLLIDFFLSFSFFAIFFGQYKLEQLELD VEFPEKLINDKPIELTSISIGYCPPLFSEEKQNPFTIL" gene complement(<497951..>499062) /locus_tag="CAEBREN_13812" /db_xref="WormBase:WBGene00152537" mRNA complement(join(<497951..497992,498236..498401, 498583..498734,498781..>499062)) /locus_tag="CAEBREN_13812" /product="hypothetical protein" /db_xref="WormBase:CBN13812" /db_xref="WormBase:WBGene00152537" CDS complement(join(497951..497992,498236..498401, 498583..498734,498781..499062)) /locus_tag="CAEBREN_13812" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45766.1" /db_xref="WormBase:CBN13812" /db_xref="WormBase:WBGene00152537" /translation="MNFLYASNRMSEDLKPLTPRSLPTLINEKLNALGLDTKEADLNV IRELFSVQQEDRVLSQKEVWEWKESERKILVNLRNYKNDTENIVKRGKCSLWFCLFFT LPISFCIYEAVSLDNEFYFKLFFRWPIHFIAILIHFYHLSIVNTHQILEPVQVLGIVN DDWQYSMTSTELQSRQNSLVSEWTQLVKNRVKNPCLVVLVKKLIDDKPIGYNF" gene complement(<500156..>500833) /locus_tag="CAEBREN_23365" /db_xref="WormBase:WBGene00162090" mRNA complement(join(<500156..500360,500408..500556, 500612..>500833)) /locus_tag="CAEBREN_23365" /product="hypothetical protein" /db_xref="WormBase:CBN23365" /db_xref="WormBase:WBGene00162090" CDS complement(join(500156..500360,500408..500556, 500612..500833)) /locus_tag="CAEBREN_23365" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45835.1" /db_xref="WormBase:CBN23365" /db_xref="WormBase:WBGene00162090" /translation="MSKNEPPILAALHRPDPEEAKLKAIRDLLKGVQEEGVVSDEEIR KLKKLENELLKRQKMYKKLLGNWNQKWKFTTRFYMLFPIPFLLCVLFFGNSLAAYCKF ILLMSSWPVKSVAIVILFYFYRFDLNFPTWPEAPENEDDDWQDSMTSTEFQSRGKALL NSWEKLKTERNNHNASENLVSQYFGSAHLYT" gene <502526..>506680 /locus_tag="CAEBREN_25839" /db_xref="WormBase:WBGene00164564" mRNA <502526..>506680 /locus_tag="CAEBREN_25839" /product="hypothetical protein" /db_xref="WormBase:CBN25839" /db_xref="WormBase:WBGene00164564" CDS 502526..506680 /locus_tag="CAEBREN_25839" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009007 (Peptidase aspartic, catalytic), IPR000477 (Reverse transcriptase), IPR001584 (Integrase, catalytic core), IPR018061 (Peptidase A2A, retrovirus RVP subgroup), IPR001878 (Zinc finger, CCHC-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45549.1" /db_xref="InterPro:IPR000477" /db_xref="InterPro:IPR001584" /db_xref="InterPro:IPR001878" /db_xref="InterPro:IPR009007" /db_xref="InterPro:IPR018061" /db_xref="WormBase:CBN25839" /db_xref="WormBase:WBGene00164564" /translation="MATLEEQIANLTQAVAALAQLQTQQAQAQAQAQAPTATGAPRLF DQIANRIPQFTYDPEVDKTFDLWYARYKDVINKDGQNLNDEEKTRIVLSKLSDPNYTF YSNRLLPKNPTDFTYTETVDQLKKTFKSTSSIFKKRQDFLRLEYDGTNLEEYTGTVLQ KFTASEFKKMSDDQVCCMVWISGLRDTSLNDMRTKALQAMEAKPEITLLELETEVKRL MDIRADSKAIASPTTGINQVRRHQPKKEFSSKFDKPPPSPCPGCKGSHWLKDCPKPKI ECRKCKKTGHIEKNCRVNSWSQESKVNSIIVGAATTPGANRIYRTLQINGKPIKMQLD TGADLTLISEADWKKLGQPTLNKPTISIRSANHQPIEVKGWFSCTVTIGNDEKPLKAH VADTETLLGTDWMAQDHQLWNLLNSSQQINSVGSPTGSACAYLDSVREQLQKSLEQEY PQVFHAGLGKCTKLKAEIRLKPDAKPVFRKARPVPYATLAAVSDELDRLTTQGVLAPV DHSSWAAPIVIVKKKNGSIRMCADYSTGLNDSIEQHRHPLPTAEDIFTIINGGKFFTQ IDLAEAYLQIELDDQSKNLLSINTHKGIYQFQRLPFGVKSAPGIFQQVMDQLVNGIEG VSAYLDDIIITGGTIEEHNIRLKKVMCRINEFGMRMKLEKCKFLMEEIRFLGFIVDKN GRRPDPEKIAAIKDMPAPKDVTQVKSFLGLIQFYGAFVKHLFRLRPPLDALTKKDTPF KWSRDCQHAFDKIKEALQSDLLLTHFDPTKPIIVAADASKDGIGGVLLHQYPDGSQKA VFHISKALNKAQQNYSQIEKEGFALITAVTKFHKYLHGRFFTLKTDHKPLLSIFGDKK GVPVYSANRLQRWATILLNYQFNIEYVNTLAFGQADALSRLIAENTNNLEHEDQVIAQ IETDVVDTLEHGCQQLPVSAHIIRQFSKKDPTLQAVYKFVKSGHWPRSIPKDTPLRDF YNRRGDLYIVHKCVMFGERIIIPTKLRNRVLRMLHRAHPGIVRMKKLARSFVYWPSID SEIEKIVKSCDQCAAVAKDPTKNTLCSWPLTTAPWQRVHVDYAGPLNGKYYLVMVDSY SKWPEVHMTSSISTSATVKLFQQTFSQFGVPETLVTDNGPQFTSNAFNNFCVAQGITH VRSPPYHPQSNGQAERFVDSLKRALGKLKGEETDDAALKLFLQSYRSTPCDSSPNQAS PAENFIGRRIRTFLNQLLPTADPISSDRNESMELQFNRHHGARTKEFGPTEKVYVKDY RNLSTPTWIPGTILRRIGQTLYSVRVDGNLSWKRHANQLRPRGSSPLTDTPMDMIDSP QNLDESQTRADSDVSSVPSPVPVTCPVPTTTTPSPAVPRRSSRATGPPSRLVMDPTKK TYTPLH" gene complement(<508068..>509442) /locus_tag="CAEBREN_06928" /db_xref="WormBase:WBGene00145653" mRNA complement(join(<508068..508298,508344..508521, 509003..509157,509212..>509442)) /locus_tag="CAEBREN_06928" /product="hypothetical protein" /db_xref="WormBase:CBN06928" /db_xref="WormBase:WBGene00145653" CDS complement(join(508068..508298,508344..508521, 509003..509157,509212..509442)) /locus_tag="CAEBREN_06928" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45583.1" /db_xref="WormBase:CBN06928" /db_xref="WormBase:WBGene00145653" /translation="MSSTLAPFIVRKLAGLGSDPRPADLDALHKLLDTVPEERVVSDE EVQVFKNVEKKTLVYQKTFKKATEDLNERTKFTTRFCMLFSLPVLLSIIISGILPKFE VFGVCIFVLSFWPITLIAVVFLFHLYGFDLDFPFPVPVQYEVLKDEDDDWQDTMTSTE LHFRQKALVNGWEQLEPEQLERLDSVVLFLSALLINLGHYSIRLLALHQFFRKNSDLF SSPSLFTEPLAIFFVIEFIFSIFMALLFCAPFWVKVYQIITFKKNL" gene complement(<516802..>518053) /locus_tag="CAEBREN_08267" /db_xref="WormBase:WBGene00146992" mRNA complement(join(<516802..517014,517062..517254, 517306..517460,517548..517812,518001..>518053)) /locus_tag="CAEBREN_08267" /product="hypothetical protein" /db_xref="WormBase:CBN08267" /db_xref="WormBase:WBGene00146992" CDS complement(join(516802..517014,517062..517254, 517306..517460,517548..517812,518001..518053)) /locus_tag="CAEBREN_08267" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45783.1" /db_xref="WormBase:CBN08267" /db_xref="WormBase:WBGene00146992" /translation="MSGPTSMLYLTTSSTPEMVYTMSKDILPSTPDTLPIYIAEKLDA LGRDPKEVDLNMIRVLLYTNREERVVSHEEVQVLKNLEKKVLENQNNYKKETKHMNDR ANFSTRFFLLFPMLAALAVFIIGSILKREALLKYIILLGFWPIKLAAVVILYYSYFPD GGFLDLIGIPYYVKPQVFENEEDDDWEDSMTSTELLSRQMAIVTEWEKLREERKEYFS NNSLSVSALICNSFYTVIRFGFIMELEKQKSIPFFDPSFFLVTEFIFSFSLLFLFFLQ FLSEVGHGEDFKKQSV" gene complement(<519136..>520519) /locus_tag="CAEBREN_01447" /db_xref="WormBase:WBGene00140172" mRNA complement(join(<519136..519375,519570..519732, 520058..520212,520265..>520519)) /locus_tag="CAEBREN_01447" /product="hypothetical protein" /db_xref="WormBase:CBN01447" /db_xref="WormBase:WBGene00140172" CDS complement(join(519136..519375,519570..519732, 520058..520212,520265..520519)) /locus_tag="CAEBREN_01447" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45673.1" /db_xref="WormBase:CBN01447" /db_xref="WormBase:WBGene00140172" /translation="MSKDPVKSPPGTLSSFINRKLDDLGSQPTGADLNAIRVLLDIVQ YERVLSYEEVQDWKRSEKKVLENQNTYKEKMKTNEVQGKCSIYFCLFFTLPVFLCIYL TESLGETTPYFFTRLLVRWPINFIAIAIFFFYMNSLSQPPKQVQPKKNEYDDWQDSMT STELQSRQRALVDKWELVKEQNKTELGLDRNINLACFFNMFYFVCRLIAVVVLMDKNA YILYFSSFKEHTLYMMLNIELLFTIVFIFLFYQQFPETEKAEKKSDCKLHLV" gene complement(<522086..>523341) /locus_tag="CAEBREN_15007" /db_xref="WormBase:WBGene00153732" mRNA complement(join(<522086..522325,522375..522552, 522598..522755,523087..>523341)) /locus_tag="CAEBREN_15007" /product="hypothetical protein" /db_xref="WormBase:CBN15007" /db_xref="WormBase:WBGene00153732" CDS complement(join(522086..522325,522375..522552, 522598..522755,523087..523341)) /locus_tag="CAEBREN_15007" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45726.1" /db_xref="WormBase:CBN15007" /db_xref="WormBase:WBGene00153732" /translation="MSKDLVPSKPNTFPSLIARKLDNLSEVPRKTDLEVIRELLDVDQ EERVVSDEEVQRLKNLEKKTLANQNKYKTLEEQVKKSEKCSVFFFLFYLLPLMLCHAV FKRILDEESRKIVFKVLSCWLINLIAVVIYLYQLYGSHLKIRFGSSKPVEHKVFDNEG CYWQSSMTSTELKSKQKAIVNSWEQILKVKPLLNYILSMFAFLFHIFHILYFFVRFAV IHEIVAEKSAVYFSFSFLTEPLLIYYLFDYIFSFLFFALFFVQMFIGMSQRDVVSPSR " gene complement(<527820..>528904) /locus_tag="CAEBREN_07080" /db_xref="WormBase:WBGene00145805" mRNA complement(join(<527820..528059,528263..528434, 528479..528591,528635..>528904)) /locus_tag="CAEBREN_07080" /product="hypothetical protein" /db_xref="WormBase:CBN07080" /db_xref="WormBase:WBGene00145805" CDS complement(join(527820..528059,528263..528434, 528479..528591,528635..528904)) /locus_tag="CAEBREN_07080" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45727.1" /db_xref="WormBase:CBN07080" /db_xref="WormBase:WBGene00145805" /translation="MTENTDDQTSTSEKLSLFITSKLDAIVSMERDISTDLTNVRDLL EIVPEEYRFASEKEVQELRKVMEKYDNKLETSDDQLTYLKKRQLANLALFIWTLFLIA HPNLGWMTSGWAYLVYVSIYVGLFALTEPVTAQNAEEEDEDDWEESMTSEEMKSWQRA ILLACTHESGILTEVYRHSRMLWVQSLFVDTILITYFLIRTAACFFVSIPHRNLWIHA EGSAFYVLCAVFFLFVVHNPLAKGLAGKMHRICNYFLMLGVMDNSL" gene complement(<529840..>531457) /locus_tag="CAEBREN_11983" /db_xref="WormBase:WBGene00150708" mRNA complement(join(<529840..529928,530736..530923, 530972..531129,531209..>531457)) /locus_tag="CAEBREN_11983" /product="hypothetical protein" /db_xref="WormBase:CBN11983" /db_xref="WormBase:WBGene00150708" CDS complement(join(529840..529928,530736..530923, 530972..531129,531209..531457)) /locus_tag="CAEBREN_11983" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45811.1" /db_xref="WormBase:CBN11983" /db_xref="WormBase:WBGene00150708" /translation="MSEDPLASASPSITKHIDDTIFARKYRVAELVRAIEKMDEIDDN ELASEEEVKELEDLEKKIRDHEGIFKEELSTLEDAKSKDIWFMATVLPLPIFGMFILD FNLFQYENIPVCLHILYSGPVITLVYVIASLIYFIASRKRANSKELGKPTEPDALDDW EHTITAADLRHRQLEILKYFKKLRCGIVAHKIWIYIWVKLLRLRSTDLSHHVALIQHP KANRGRTGT" gene <536094..>538476 /gene="Cbn-kin-19" /locus_tag="CAEBREN_06321" /db_xref="WormBase:WBGene00145046" mRNA join(<536094..536243,536291..536370,536620..536719, 536744..536932,537191..537459,537595..537709, 538087..538242,538321..>538476) /gene="Cbn-kin-19" /locus_tag="CAEBREN_06321" /product="CBN-KIN-19 protein" /db_xref="WormBase:WBGene00145046" CDS join(536094..536243,536291..536370,536620..536719, 536744..536932,537191..537459,537595..537709, 538087..538242,538321..538476) /gene="Cbn-kin-19" /locus_tag="CAEBREN_06321" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine-protein kinase domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR001245 (Serine-threonine/tyrosine-protein kinase), IPR017442 (Serine/threonine-protein kinase-like domain)" /codon_start=1 /product="CBN-KIN-19 protein" /protein_id="EGT45540.1" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="WormBase:CBN06321" /db_xref="WormBase:WBGene00145046" /translation="MANVMSVKDFIVATKYKLIRKIGSGSFGDIYVSINVTNGEEVAI KLESNRARHPQLLYESKVYRILQGGVGIPHIRWYGTEREYNVLVMDLLGPSLEDLFNF CSRRFTMKNILRKPLMSFEKRIMSTDIILSWGVFLIDCLLLFNVHSRCKSRVEVRHLK KDSGFAAHHYFPATVLMLADQMIGRIEYVHVKNFIHRDIKPDNFLMGIGRHCNKLFLI DFGLAKKYRDSRTRTHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYF NRGTLPWQGLKAATKKQKYEKISEKKMTTSVEHLCKGFPAEFPMYLSYTRGLRFDESP DYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAQQSATNNIAGTTGTNQATGVPSSGV PPGVAPSGNTPQ" gene complement(<542962..>543756) /locus_tag="CAEBREN_13303" /db_xref="WormBase:WBGene00152028" mRNA complement(join(<542962..543082,543129..543495, 543549..>543756)) /locus_tag="CAEBREN_13303" /product="hypothetical protein" /db_xref="WormBase:CBN13303" /db_xref="WormBase:WBGene00152028" CDS complement(join(542962..543082,543129..543495, 543549..543756)) /locus_tag="CAEBREN_13303" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45761.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN13303" /db_xref="WormBase:WBGene00152028" /translation="MIDGHKFQYRGATGHDFETFWDDRMTGTVEIFKYITDLFQYPRI KSILISKPYPIRPLYEWIAEKYNGKVEEWSISVKDRSQVYWFDLNFETYRLCFDPAKW LNLDDVIKLSSQSITLHFDSTSLTSEDVNGFLKHWIQTTHLTKMRYLFLYAGEDYFYD IDVILSGIKHTPAGALLDHPFKEFITVWGTVRVDVDFFRTKTGFTIQRNNGEMASIFF RPWLSTTFEMIIH" gene <545312..>546177 /locus_tag="CAEBREN_06756" /db_xref="WormBase:WBGene00145481" mRNA join(<545312..545589,545638..545828,545939..>546177) /locus_tag="CAEBREN_06756" /product="hypothetical protein" /db_xref="WormBase:CBN06756" /db_xref="WormBase:WBGene00145481" CDS join(545312..545589,545638..545828,545939..546177) /locus_tag="CAEBREN_06756" /note="contains similarity to Pfam domain PF00646; contains similarity to Interpro domain IPR001810 (F-box domain, cyclin-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45698.1" /db_xref="InterPro:IPR001810" /db_xref="PFAM:PF00646" /db_xref="WormBase:CBN06756" /db_xref="WormBase:WBGene00145481" /translation="MDNEELSFLWRTAIDHFSESAIGRLLNLLRSLPVFFKTKTLDIK NTSTEIIVNTCSKQFAPAPPTTKSISFPLRRLSYVALQEVFKHMDLIQLIELSLCSKK CIQLVKIARRNKGLYIRLTAIFCNCLNMHTKNAYFENCFLSVYKKNQNKNGINLYDGM INGHKFKYYRTKNNTFNTYWENITAGRVEIFKYITDLFHYPRIIEAHIVEIIPIRPLY DWIALKYGGRSKNFDFL" assembly_gap 546494..553224 /estimated_length=6731 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <554968..>555526 /locus_tag="CAEBREN_18094" /db_xref="WormBase:WBGene00156819" mRNA join(<554968..555039,555093..555202,555253..555381, 555427..>555526) /locus_tag="CAEBREN_18094" /product="hypothetical protein" /db_xref="WormBase:CBN18094" /db_xref="WormBase:WBGene00156819" CDS join(554968..555039,555093..555202,555253..555381, 555427..555526) /locus_tag="CAEBREN_18094" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45753.1" /db_xref="WormBase:CBN18094" /db_xref="WormBase:WBGene00156819" /translation="MAQMNQEEIIQQFDPEMRAKIRREAELRDEFWRVMKAHRARVYP TFEERRDAVLAINVIFTEVNDLAADLMENGYIPPPHPDQPPAAETENDLEALRRVTEV LREMNERRQRNEQQQQPPQNEDTSSEEENGNNQN" gene <558695..>562117 /locus_tag="CAEBREN_29195" /db_xref="WormBase:WBGene00191160" mRNA join(<558695..559090,560500..560766,561896..>562117) /locus_tag="CAEBREN_29195" /product="hypothetical protein" /db_xref="WormBase:CBN29195" /db_xref="WormBase:WBGene00191160" CDS join(558695..559090,560500..560766,561896..562117) /locus_tag="CAEBREN_29195" /note="contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine-protein kinase domain), IPR008271 (Serine/threonine-protein kinase, active site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45639.1" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="WormBase:CBN29195" /db_xref="WormBase:WBGene00191160" /translation="MIGSGGYGQIYLAMDILKYEERAVKIEPRMRQESITKRMIMEQE ALQSLQGKLHCPLMYASGYNDEFNFIVMQLLSENVGDIRKRSPTGRLSKESVGRIAWQ TVNALRDIHEMGYVHRDVKPANICFGCHFENRHILYLLDFGLFRRFKDTTTGQRFPPR KNAGFKGTERYVSVRVHEKLEQTPLDDLFSVLYTSYELMVGEVPWRFLDDVEEIYAVK QLMNELGNNGEMFKGIASFLVDFHRLLVSCDPNDDPPYEKLMECLKKLFETKSLEDPY DWEDGFRITLNASFVEPK" gene complement(<562235..>563142) /locus_tag="CAEBREN_31471" /db_xref="WormBase:WBGene00193436" mRNA complement(join(<562235..562334,563000..>563142)) /locus_tag="CAEBREN_31471" /product="hypothetical protein" /db_xref="WormBase:CBN31471" /db_xref="WormBase:WBGene00193436" CDS complement(join(562235..562334,563000..563142)) /locus_tag="CAEBREN_31471" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45615.1" /db_xref="WormBase:CBN31471" /db_xref="WormBase:WBGene00193436" /translation="MSFYEIPKFATSQEYINEITKQLREVSLENIDGEALTRTICILI DMIRATKAKMAEEKRDQSDLADLMQAIGNLQLQASK" gene <563640..>568069 /locus_tag="CAEBREN_11290" /db_xref="WormBase:WBGene00150015" mRNA join(<563640..563719,564282..564599,566161..566405, 566482..566623,567099..567198,567719..>568069) /locus_tag="CAEBREN_11290" /product="hypothetical protein" /db_xref="WormBase:CBN11290" /db_xref="WormBase:WBGene00150015" CDS join(563640..563719,564282..564599,566161..566405, 566482..566623,567099..567198,567719..568069) /locus_tag="CAEBREN_11290" /note="contains similarity to Pfam domain PF00102; contains similarity to Interpro domain IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45773.1" /db_xref="InterPro:IPR000242" /db_xref="PFAM:PF00102" /db_xref="WormBase:CBN11290" /db_xref="WormBase:WBGene00150015" /translation="MNSTENLTNCPTCLPPVDCELQFAYFDWFVFLTSVSVTFTLMIF IHVCYKQCTVEDLSENVDPYKMNVVIASRYFRTLYEKVMKHREELKIEGESEPGEDFC RYFIDLYERDSAVSGAPGNGRIVKEHEIFQRIKSPLIMHSRVKLKDHKGQFHDDYVHA NYIDYPSGLKLIMTPGPQAKDKHYKMSDIERFWWIANQEGADRIVMLCGFEERYNGTQ CDEYYPDNELETLKYRYLTVTCVEKRHVEEEDPITYRKLAVKFVGEPKFYVSHWEYTG WTEYGHPDKLDRILELLKNNSWRFLDDDDKPYYDFLMEGYQYWDTVKDKVLEMKEIER KKMEKKLRKSEKSKSKRAELVKKEKSVKKEPVKKEEPVKKAEPVKKEPVKKEEPKKEA KKEEAKKETTKKEKIKSKK" gene complement(<569787..>574114) /locus_tag="CAEBREN_16212" /db_xref="WormBase:WBGene00154937" mRNA complement(join(<569787..569872,569948..570135, 570802..570900,571112..571223,571275..571453, 571748..572289,572803..572974,573044..573291, 573640..573911,574069..>574114)) /locus_tag="CAEBREN_16212" /product="hypothetical protein" /db_xref="WormBase:CBN16212" /db_xref="WormBase:WBGene00154937" CDS complement(join(569787..569872,569948..570135, 570802..570900,571112..571223,571275..571453, 571748..572289,572803..572974,573044..573291, 573640..573911,574069..574114)) /locus_tag="CAEBREN_16212" /note="contains similarity to Pfam domain PF05327; contains similarity to Interpro domain IPR007991 (RNA polymerase I specific transcription initiation factor RRN3)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45813.1" /db_xref="InterPro:IPR007991" /db_xref="PFAM:PF05327" /db_xref="WormBase:CBN16212" /db_xref="WormBase:WBGene00154937" /translation="MKRSTASAPSLSPKRELDNPPKKVKLEEAEDVKPSTADTPPSGR EIIEGYLKGDVPMGVLYRKICNALETFEQWESELPKIQLLEQFIGHADTMETRTNVLV TRLLALRWDKIPSSIIGKFRTFVCELAIRHLCFTEDVYLSVIQKLVPQYEANQETGIV KMVLTEEKQNEVYEMAHYIISSVLRCFPLSAKTVLKCAKRAMPHFTCPAVAVGGFMRN LMLMQKYIPASIAKDVWETIFERLARDDAHNWRCEQNEEDNKSPRLFALNEEILIEDV VESTNSSEDVTTPEVLEQRKGEQTLQYLDSVCTDLITFIQDAEGISEENAHQKWLKSF KIHGDHVMAPEKLFDTFLEVLESTMLNATHTQYVSFIWLYFGSLKSEYEMKVLEHLWA ITIRMPRAPADARKSQGAAAYLAAFLARAKYVKKSTAFTWLEEIYTWLRHYVDQFGSG SSQILPGLQRHGTFYSISQAFFLVFAFRYKEFVKDQEMLEKIRGWGVGRVVHSPLEPL RYVSKPVARCFSAITRSLQLVYCNHVIPIEEVQRPFDDMFPFDGFHLKVSSQFIIPLM RKFSPLAEDLSTLTKALCWNAATADKSEKTLEAVASSSEGLDFLDEDDVLMGTGYRDR TFSCGQSSLNIYSATPGLKSFNV" gene <580482..>584837 /gene="Cbn-pxd-1" /locus_tag="CAEBREN_19469" /db_xref="WormBase:WBGene00158194" mRNA join(<580482..580548,580926..581179,581362..581514, 582593..582754,582802..582886,582945..583205, 584251..584714,584772..>584837) /gene="Cbn-pxd-1" /locus_tag="CAEBREN_19469" /product="CBN-PXD-1 protein" /db_xref="WormBase:WBGene00158194" CDS join(580482..580548,580926..581179,581362..581514, 582593..582754,582802..582886,582945..583205, 584251..584714,584772..584837) /gene="Cbn-pxd-1" /locus_tag="CAEBREN_19469" /codon_start=1 /product="CBN-PXD-1 protein" /protein_id="EGT45682.1" /db_xref="WormBase:CBN19469" /db_xref="WormBase:WBGene00158194" /translation="MRRITTITMLSLALVLVLRIADAQNIEVSQEHIPKVIRYSEPST AGPNIHEEQFVPLSPVRRARAAPFPKREYIPKPPVSSEEFDGEEEIDPATATVPSDVE VKQDSIDHQYYQAETYVGDEEKVKKYWVNVENFMKKPNTIGNMSHPLLSQSYRRAVGA RLQFKFPFYGHKMANLTIATGGFIYIGDHTHNWLAATQYIAPLMANFHTYLNNSNIVY ADDGESFVVEWRNVQLKEDKDKTTDAFTFQAILHKNGDIVFIYKDVPYDISNISDANH PVKLGISDAYMFKHNLAQSTTPKRVIYEYHRIELAAKKIVSNTVVILKAQPTCISFDT CDSCTNATLPHFNCLWCHSKKAHGGPFCTDESGLHRRRQHWFEGNCYQRSKNLYCDAN EDENEDYDEDDYIKQQVFPGAREIPVEVTKIRKVKIDTTSADWKKEPTENEGRGGVAT ITMIVLLLLTFGAWLAYAYYYPHTTSGQLLIRYRPSKWHVPSSHVRYSASVHM" gene complement(<586240..>592127) /locus_tag="CAEBREN_17713" /db_xref="WormBase:WBGene00156438" mRNA complement(join(<586240..586378,586423..587306, 587356..588639,589264..589731,589926..590013, 591323..591335,592070..>592127)) /locus_tag="CAEBREN_17713" /product="hypothetical protein" /db_xref="WormBase:CBN17713" /db_xref="WormBase:WBGene00156438" CDS complement(join(586240..586378,586423..587306, 587356..588639,589264..589731,589926..590013, 591323..591335,592070..592127)) /locus_tag="CAEBREN_17713" /note="contains similarity to Interpro domain IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45715.1" /db_xref="InterPro:IPR007087" /db_xref="WormBase:CBN17713" /db_xref="WormBase:WBGene00156438" /translation="MIARGIDRNLRMKDRCEMEDSLKLGCYTMRCYKCNTSFVSMEVY KEHKDWCHPTPSDVEAYQTPDKLHAIHENCHRHFVVPATKKEIADGRGVVQWHLYQNG HQQIQELHDFQKAHPNQVNSSGYQGYNNPYGASNGPHPRNSASGASYNPYQHQRNWNP RNYNGGWNRGGWNHRGRNRGGRGGVSFHSRGASWRPLVSNQDGEKENDQNREQPSTPT RPARPPTPFTSPGELAPLQIVSPPDTPTQASETGGFPLVEDPQEMPQSPVDEVEVEET APKNLAPQSAEPFLPSPTATEPVDAIPLPSEVQAATPTADSEAQSEELSAPAEQHQDV AMIAQALPTSEIPLPPSVVKLAPLPSPMEADLGVQPEELHKQHHQDVALIEPQSSDAS LPLSLEVIPPQSPPAAEPAGQDALSAHETSSPQPVAEVVLPSPTGSAAGLAAVQLEEQ PVPTEQEAPRAPETPLSSLAPPPSPLPASLTVQTEQDALFVPPSPSPAASLAVLPEEQ SAPDEPVVQMIAQAPLPPQAGNVPVPQPRDQSDEDDVIFVCEVKKGKAPRPSPAANLA VRPEEQQAPDEQAVQVIAQTPPPPQAGNVPEPQPRDQSEDDDVIFLCEVKKNNAPRPP LPPPPPAPKIHSPHVVIDLGPLPELPAPPMPLPMPSPNENLPSPTAKNGPPAWLRCNK WSDLKEKLSPELEAQLTPDQRRGYIGSLWTEHPEPAQSPPGLHDGSQLGHSPEISEAP APSHPVQQKSSGSYPDYQHCDFIGQVRIEIDADGKVQVLGEFSQDESQGRQESGEQGH HGAQTPKRYEDPDRQLTPTPDRRSSQNTHTPSYRDTLGSPVLSSPEGSPPAPVSSKPR GSKSVSFSEPLVQCCYLLLKSQEVEYRQFIAKKTEKRVSTSSIPSVPPPVKKVATVPP AKIPAKAPVKAPVPNGNIFDSILDVMSSPQGPTILGVERKELAPAKVKGPNFMAKKGF TFGKK" gene complement(<599115..>604385) /locus_tag="CAEBREN_09110" /db_xref="WormBase:WBGene00147835" mRNA complement(join(<599115..599329,599378..599790, 599852..599923,599973..602224,602274..602975, 603025..603130,603178..603291,604336..>604385)) /locus_tag="CAEBREN_09110" /product="hypothetical protein" /db_xref="WormBase:CBN09110" /db_xref="WormBase:WBGene00147835" CDS complement(join(599115..599329,599378..599790, 599852..599923,599973..602224,602274..602975, 603025..603130,603178..603291,604336..604385)) /locus_tag="CAEBREN_09110" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45656.1" /db_xref="WormBase:CBN09110" /db_xref="WormBase:WBGene00147835" /translation="MVIIGVLLVSDTGWEDSRYEECKQYFKCTHPSGNQGLCGHVGTF GELSEHFARHTKQYRIRCSNCEQRFVEEGFYFLHLNINNKKRCQEEHRSDIRHSAESV RVVWKSRNNHIKASTKEEYDDFIADKASKTPVTPTINAKSRSAPARDQRQSVKKPRNE QVCQEKEAVETNPIPVNQPVQSNESLPDAQRNVLNPQSVSSSPESAADLQLTDVERTP GGFVSTETRPPSTENPIIGEEQSPASAPPLRQNQEYEQPMNNDFLSESWRPPLVPVGF DPRRPPPPLGVQVPTQTFESRRSFRASEQQVGSGRVEKEAAPQDRPDQRPPTAQQQSP GRPDSVPLSSAFSALDLGHQDRETGQRTGDFPVSSSDHSLRGPEDLKEEHAQRALSPQ PVPPPNPGQYSLNDLSAPWSTEAPRLGYHRSIGSATSKSAQTQNFSRRQDLLNQTDQR PVEPQVVRPIADTPAATHPCPVETQKSSHHQPERRSREQERSPTLDPLRHFRGLNSIG RSAQVTTAVSTGQPPDSLFQFPTRVDQQPRSALDGPRPEPIAVRTDSQNELDANEVVH EDSVHDFDHDLGRDEPMDIDQEPAATIPQDAQTPPGSPEERDSEPEPTRLSGRPPSSA GSRSRRVRRDSDESYRPDSPVRRNRSRSAAKKKKKRGPAKPRKGAKGRKPSNRRRSSA RKYSESSEDSNMFDDDDAPARVPIRGAPSAAIQQNSVSELPDYESPDDEPAPAPPRRG RPPTRTSQVTKPVAKRTRPPTPEDSEDSVESYHPPQKTTRGRRRSSGAREYDYDPPYR PPVANVSARPTERRRTRSQGAADESLELPKRTRRRKSTSTVQKDTALSKIREQLLRQR TPEQVLRQRTPEQVLRERTPEQVRRQRTPEQVQRQRTPEQVMRQRTPEPEISDHEMEE RAPRDPSVEGEDEYEEVAPVQEVAQNDAPVIQEVKQEPREEPRRSRPEFRRPVGAARG SPDIEIISHMRNGRVLSLFSNPSTRESSLARQGSEQRDSTTQPYPVDREFYDRNRVEA RGGPVQNQPRNPPRPPQEVRIPPRQPQPTISQGPRQSRPPLLGTRPHQPRNPVPVPNT SSLRPPVDTSGLVSSRIMRPDEFHRGATHTRYHPGNVKRTLSRGSSGGRSASGGSSGD RDEERRDEPRARAPAGGRAPYRPPSRGEVEYVEQAPRPDAPRHAPSGGRAPYRPPSRG EEENREAPMAPRRSGRTPVRRSSPVGQAQVPPAQSTRQPPSRGQVMDRQERIRMEILR EQQIARQQVDQLARGFEQIVASGEARTKAIQEEAAKKKTIMERAT" assembly_gap 606740..606749 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <609540..>626418 /locus_tag="CAEBREN_06523" /db_xref="WormBase:WBGene00145248" mRNA join(<609540..609671,610275..610441,610743..611259, 611744..611863,624611..624751,624982..625107, 625576..625710,625757..625903,626275..>626418) /locus_tag="CAEBREN_06523" /product="hypothetical protein" /db_xref="WormBase:CBN06523" /db_xref="WormBase:WBGene00145248" CDS join(609540..609671,610275..610441,610743..611259, 611744..611863,624611..624751,624982..625107, 625576..625710,625757..625903,626275..626418) /locus_tag="CAEBREN_06523" /note="contains similarity to Pfam domain PF00611; contains similarity to Interpro domains IPR001060 (Fps/Fes/Fer/CIP4 homology), IPR001452 (Src homology-3 domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45840.1" /db_xref="InterPro:IPR001060" /db_xref="InterPro:IPR001452" /db_xref="PFAM:PF00611" /db_xref="WormBase:CBN06523" /db_xref="WormBase:WBGene00145248" /translation="MSKLRRSISRSVFQLNNSLSRANSLNGLVDLPTMSNTTLVDKFA TPTNFRQLRDLIRNNNELLSEVVAAFEEKAALDFHYSKTLKKISIRLHKLTQGVESGI DKGWTNVAEQFDIHATIHSNLGSALTEDIIQPLRSIHTSQQKTIRAADNFVEREIRKL KDKKDETQKMKRSLYVLSKELEKTENAADREKMQPEKYALRKKKYREQMVRTEDEYVW QTVDLEKQRRMTENVLRKGVESMETVERQRLAHCQTALGRYKRKIENLGPNLRQMFER HSNNLELAVDSVPEDYIQTIQPSTSAVNHITLIDLHAENFGEVMSSTRRRQNLERVSG VLDNELKRMYNNQTADVMVSNSKQISVLEFMEYLYYKINDAINIVDGGQNRGFHRLSR FQHKIKDKSGLAMTILTIPLSGENNSLPPPSLSLEASTAYPSPRGSNEYDEYEKISDD GFYSTATTTTSSSGPRTTTTFSEPDGPTICRVLYDFEPKHADEIQIREGQCVLVEDRI GEDWLIGHVISQPDNSSIDPRSGRFPTTYVSLRQ" assembly_gap 612432..612742 /estimated_length=311 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 615194..615203 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <627032..>629076 /gene="Cbn-nit-1" /locus_tag="CAEBREN_10078" /db_xref="WormBase:WBGene00148803" mRNA join(<627032..627243,627709..628088,628463..628544, 628773..>629076) /gene="Cbn-nit-1" /locus_tag="CAEBREN_10078" /product="CBN-NIT-1 protein" /db_xref="WormBase:WBGene00148803" CDS join(627032..627243,627709..628088,628463..628544, 628773..629076) /gene="Cbn-nit-1" /locus_tag="CAEBREN_10078" /note="contains similarity to Pfam domain PF00795; contains similarity to Interpro domains IPR003010 (Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase), IPR000132 (Nitrilase/cyanide hydratase, conserved site)" /codon_start=1 /product="CBN-NIT-1 protein" /protein_id="EGT45570.1" /db_xref="InterPro:IPR000132" /db_xref="InterPro:IPR003010" /db_xref="PFAM:PF00795" /db_xref="WormBase:CBN10078" /db_xref="WormBase:WBGene00148803" /translation="MPKIALVQAGTVLYDKAATLEKVKKYVEEASENGAELVLFPEAF IGGYPKWNSFGITMGTRTPEGRKEFKSSVEPIAEHNSPLHSTFPLPRYFENSIEEHGE ESKLLETLAAQKNIHIVIGVVEREASTLYCSVFFYSPEGYLGKHRKLLPTALERCVWG QGDGSTMPVFNTSVGKIGSAICWENYMPLYRMTLYSKEIQIYLAPTVDDRDVWLSTMR TIALEGRCFVVSSCQFLKSSAYPSDHALRKEYGDDTILIRGGSCAVDPLGTVLVKPDF TKETIRYTEFDLSDIALGKMDLDVVGHYSRPDVFELRVNENSQSTVSKK" gene complement(<629344..>633546) /locus_tag="CAEBREN_22451" /db_xref="WormBase:WBGene00161176" mRNA complement(join(<629344..629455,630153..630257, 630386..630511,631517..631783,631948..632049, 633015..633151,633508..>633546)) /locus_tag="CAEBREN_22451" /product="hypothetical protein" /db_xref="WormBase:CBN22451" /db_xref="WormBase:WBGene00161176" CDS complement(join(629344..629455,630153..630257, 630386..630511,631517..631783,631948..632049, 633015..633151,633508..633546)) /locus_tag="CAEBREN_22451" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45686.1" /db_xref="WormBase:CBN22451" /db_xref="WormBase:WBGene00161176" /translation="MISYTILYVFAHPILNPLISRANALAAAKRLLDDSRGQSWEQLA RKYTLGLAAAPCVERLTEEELDESFDTMPEYHNYRFNRSRSVDLSSISREKYLSRWSR ENTPVDNEKRFASHVRRSYTPVRDIAAVEHVNDGNLHRSRTPLAAVTAPYHTNVHYRS EIEPFRKYDVYGLRTWSYPIYKYVYGREGDYRRPYSFDRNYGTTPVYTPPQLAAESRP ITTRRGYSGYSYLANETHFDIASRPKSLSSYMYNTKYLGTTSAPWYWSYYGNSHLRHF NSYRPHNYTSSTASWSRYY" gene <637728..>645818 /locus_tag="CAEBREN_17530" /db_xref="WormBase:WBGene00156255" mRNA join(<637728..637808,637916..637991,638122..638389, 643782..643881,643932..644084,644249..644395, 645109..645264,645546..>645818) /locus_tag="CAEBREN_17530" /product="hypothetical protein" /db_xref="WormBase:CBN17530" /db_xref="WormBase:WBGene00156255" CDS join(637728..637808,637916..637991,638122..638389, 643782..643881,643932..644084,644249..644395, 645109..645264,645546..645818) /locus_tag="CAEBREN_17530" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR013217 (Methyltransferase type 12), IPR013216 (Methyltransferase type 11)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45603.1" /db_xref="InterPro:IPR013216" /db_xref="InterPro:IPR013217" /db_xref="WormBase:CBN17530" /db_xref="WormBase:WBGene00156255" /translation="MVTSVVKSEDVQQWSEDETTLISSHSSQPTEYPEEDCRKDIVRR IRHGLSGSYSHKSSTLVKSVNRHGVHKSSSQVIQETEEFIHRRLGPEVRRSQGVRVII QGAEPRSITRSRISFRDERNSEKDEKHRRCQHVSRVTSSKIPARTMSEEGFYSFSSQN SRELTEEDREKLAKQTKISDFKQNKLEVEARKNWDKFYNRNKNNFFKDRNWSAEDLKI ICPDIDFEKEISYLEAGCGVGNMLFPLVAEIPLLKLYAFDFSANAVKLLEERAKELGL PVATAVVDLSIPSISSPFEEQVDLATLIFVLSAIHPDKMRVAAENMRNLVKIGGSVVV RDYGINDHAMIRFGREALISDRFYVRQDGTRAYYFDLDELSTIFEESGFRCERKEYLH RMTINHQKNLKAPRIFVQARFIRES" gene complement(<645911..>647443) /locus_tag="CAEBREN_04416" /db_xref="WormBase:WBGene00143141" mRNA complement(join(<645911..646213,646451..646636, 646792..646974,647015..>647443)) /locus_tag="CAEBREN_04416" /product="hypothetical protein" /db_xref="WormBase:CBN04416" /db_xref="WormBase:WBGene00143141" CDS complement(join(645911..646213,646451..646636, 646792..646974,647015..647443)) /locus_tag="CAEBREN_04416" /note="contains similarity to Pfam domain PF01087; contains similarity to Interpro domains IPR005849 (Galactose-1-phosphate uridyl transferase, N-terminal), IPR001937 (Galactose-1-phosphate uridyl transferase, class I), IPR011151 (Histidine triad motif), IPR019779 (Galactose-1-phosphate uridyl transferase, class I His-active site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45561.1" /db_xref="InterPro:IPR001937" /db_xref="InterPro:IPR005849" /db_xref="InterPro:IPR011151" /db_xref="InterPro:IPR019779" /db_xref="PFAM:PF01087" /db_xref="WormBase:CBN04416" /db_xref="WormBase:WBGene00143141" /translation="MSNLNNFRRYNPLIDEWIIVAVNRINRPWQGAKTENNKSGEVHV ESKTPEKNQLAPGGVRSSGAVNQVYTSTYVFDNDFPSFTEFQNCAGERGKCALMRISG NFKFFVEDSDLFKQEEVRGVCRVICYHPDSDLTLATMDLKEVRTVIDLWNQQYLELGP KYTWIQIFENRGAVVGCSNMHPHGQLWASNHLPTIPQKKHQSQKKYYEKHGKVMLIDY LDQEMKKNERIIMRNEHWTWLVPYWAFWPYETMLVPNRHVQRFTDLEEPEKQSLASIL RELLIKYDNIFQCSFPYMMGWSGAPTGSFLSENCDFWQLHLSFFPPLLRSATVPKFLA GYEVFAEKQRDISPEQAAKTLREMDGVHYSKK" gene complement(<647893..>650107) /gene="Cbn-ccdc-47" /locus_tag="CAEBREN_21256" /db_xref="WormBase:WBGene00159981" mRNA complement(join(<647893..648654,649217..649336, 649428..649724,649919..>650107)) /gene="Cbn-ccdc-47" /locus_tag="CAEBREN_21256" /product="CBN-CCDC-47 protein" /db_xref="WormBase:WBGene00159981" CDS complement(join(647893..648654,649217..649336, 649428..649724,649919..650107)) /gene="Cbn-ccdc-47" /locus_tag="CAEBREN_21256" /note="contains similarity to Pfam domain PF07946; contains similarity to Interpro domain IPR012879 (Protein of unknown function DUF1682)" /codon_start=1 /product="CBN-CCDC-47 protein" /protein_id="EGT45825.1" /db_xref="InterPro:IPR012879" /db_xref="PFAM:PF07946" /db_xref="WormBase:CBN21256" /db_xref="WormBase:WBGene00159981" /translation="MKIIGIFVFLAILCGHLGSTAGNTDDNEFAEFEDDFADSSVPDI PEFKEDKEERRAAPPVVEQKDEFEDEDFGVVDEQDEELEKTKDADSETDEQAPVQPLK FTDVPAHFRSNWASYQVEGIVVLVIFIYLLNYIIGKTTNSTIAHTIFDMCRPSLEEQF ALVGDDGSSELDKLEPTLRRETDSVFSAWCTGRVNANSLFIQMKMIKRQDLVSRILDI FDPSYDKMTIKVSLEGGQDVDPMIFAVGEKKIASKNFKEMLDLNSFVSERKQAAQQFN LPATWQLYADQSEVVFSMLEPGVVSLLKRHEEAIEFIHISDQYTGPKPGEGETYTRLP EAQRIMFVSLNLKKLAEDEESVTEILSLVYYLIDKVKKTKLSKDAKVKAERRRKEFED AFLKQTHQIRQEAAQARKEEKTRERKQKLMDENDPDRQKRLEAKELKREAKAKQPKMK QLKVK" gene <654793..>659068 /locus_tag="CAEBREN_31748" /db_xref="WormBase:WBGene00193713" mRNA join(<654793..654990,655036..655240,655361..655764, 656258..656694,656794..657023,657768..657876, 658300..658787,659046..>659068) /locus_tag="CAEBREN_31748" /product="hypothetical protein" /db_xref="WormBase:CBN31748" /db_xref="WormBase:WBGene00193713" CDS join(654793..654990,655036..655240,655361..655764, 656258..656694,656794..657023,657768..657876, 658300..658787,659046..659068) /locus_tag="CAEBREN_31748" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002369 (Integrin beta subunit, N-terminal), IPR001169 (Integrin beta subunit, C-terminal), IPR015812 (Integrin beta subunit), IPR013032 (EGF-like region, conserved site), IPR013111 (EGF, extracellular)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45620.1" /db_xref="InterPro:IPR001169" /db_xref="InterPro:IPR002369" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR013111" /db_xref="InterPro:IPR015812" /db_xref="WormBase:CBN31748" /db_xref="WormBase:WBGene00193713" /translation="MPPSTPLLLLAAILLPLALTADWKTGEVTGKVVEKSEFPCYSLS RDNYTCSACIQFHESCAWCGSPMFDEKKPYARCDSRAKLMEHGCPDSYIEDPTTKLDI TEDSRLSDQGQVESEEEAVQIKPQQMYVEIRPKSRVKFNVTYRQAVDYPVDLYYLMDL SYSMKDDKQKLSELGDLLAERMRTVTKNFRLGFGSFIDKKLMPFIDPRIEKQLSPCPT PCAEPYGFKHQMSLTTNTAKFKAEVDKAEISGNLDAPEGGFDAVVQALACNKTIGWRE RARKMIVFSTDAGFHFAGDGRLAGVVEPNDGSCHLDREGYYTETLNQDYPSIALLHQM IKDRKANVIFAVTKNNQDLYTQLSNALPDVSSSVGVLANDSRNIVDLIEKEYLKISEK IIMVDNANASEGLKLTYRSMCLDGTTLKDTNVCEGIRVGDEVQFEVTLENTHCIDKRD FVLRIGPSGLDETLIVNVKVLCDCDCERQDRIVTNAAECHGGDMVCGVCRCKGGNVGK YCECNRPGMSTAALNEKCKRTNESAICEGRGVCNCGRCECNPRANPEEQISGEFCECD NFNCPRHDRKICAEHGECNCGKCICAPGWTGRACECPISTDSCLSANGKICNGKGECI CGRCRCFDSPDGNRYSGAKCEICPTCPTKCVEYKNCVMCQQWQTGPHNETECDKCEFK AIPVDELPVKSWSIL" assembly_gap 657223..657232 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 660238..671454 /estimated_length=11217 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <671570..>672454 /locus_tag="CAEBREN_32640" /db_xref="WormBase:WBGene00194605" mRNA join(<671570..671621,671997..>672454) /locus_tag="CAEBREN_32640" /product="hypothetical protein" /db_xref="WormBase:CBN32640" /db_xref="WormBase:WBGene00194605" CDS join(671570..671621,671997..672454) /locus_tag="CAEBREN_32640" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR012896 (Integrin beta subunit, tail), IPR001169 (Integrin beta subunit, C-terminal), IPR015812 (Integrin beta subunit), IPR014836 (Integrin beta subunit, cytoplasmic)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45630.1" /db_xref="InterPro:IPR001169" /db_xref="InterPro:IPR012896" /db_xref="InterPro:IPR014836" /db_xref="InterPro:IPR015812" /db_xref="WormBase:CBN32640" /db_xref="WormBase:WBGene00194605" /translation="MILIGCSWLPRGTDCWVNNHPENNHHIPQIFPVLNETTPCQFVD PADDCTFYYLYYYDEATDNATVWVRRHKDCPPPVPVLAIVLGVIAGIVILGILLLLLW KLLTVLHDRAEYAKFNNERLMAKWDTVSLKGRIFLMSLLIFILQNENPIYKQATTTFK NPVYAGKTN" gene <674150..>676926 /locus_tag="CAEBREN_21367" /db_xref="WormBase:WBGene00160092" mRNA join(<674150..674212,674567..675193,676135..676515, 676708..>676926) /locus_tag="CAEBREN_21367" /product="hypothetical protein" /db_xref="WormBase:CBN21367" /db_xref="WormBase:WBGene00160092" CDS join(674150..674212,674567..675193,676135..676515, 676708..676926) /locus_tag="CAEBREN_21367" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR021129 (Sterile alpha motif, type 1), IPR000157 (Toll-Interleukin receptor), IPR013761 (Sterile alpha motif-type), IPR001660 (Sterile alpha motif), IPR011510 (Sterile alpha motif, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45532.1" /db_xref="InterPro:IPR000157" /db_xref="InterPro:IPR001660" /db_xref="InterPro:IPR011510" /db_xref="InterPro:IPR013761" /db_xref="InterPro:IPR021129" /db_xref="WormBase:CBN21367" /db_xref="WormBase:WBGene00160092" /translation="MSSRESDEWSHCGEISSSYRKKQHSLQSYSTDDSFESFTSELPT VTRKYQTAPSVPTWTIRDVMDWVESIDFQEYRDRFCQQMVDGDILLMLSEEDLKNEIG MRSGLHRTRFMRSLHTLKLEADYSEADKTDLNGFLKDLSPELSCYTYRMLARGIDRGS VWSLTDKILETDIQMTNSIHRLKILQAIRPEEVAAVLAKSRPLGALSKEKYDLFISYR RDSGAHLAALIRLVLELRGYRVYFDIDEPNPGKFDSSFLENVLNSKHIVVVLSPNSLD NVNEDLLHKELRCAFDHQKNVIPIFDPGFEFPEESLIPMDICLITELNGISWIEEYQD ACVSKCIKFIEGNLNKEIVIEKYNLTCGNRKHVHFSDPTHKINALERELQKMRSELSE AHKKLEAERRKNSGPSPRRTPIFSSDGSFDFYSDNSS" gene <678984..>681183 /locus_tag="CAEBREN_28392" /db_xref="WormBase:WBGene00190357" mRNA join(<678984..679325,679376..679708,680021..680521, 680893..>681183) /locus_tag="CAEBREN_28392" /product="hypothetical protein" /db_xref="WormBase:CBN28392" /db_xref="WormBase:WBGene00190357" CDS join(678984..679325,679376..679708,680021..680521, 680893..681183) /locus_tag="CAEBREN_28392" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine-protein kinase domain), IPR020685 (Tyrosine-protein kinase), IPR001245 (Serine-threonine/tyrosine-protein kinase), IPR017442 (Serine/threonine-protein kinase-like domain), IPR008266 (Tyrosine-protein kinase, active site), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45645.1" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="InterPro:IPR020685" /db_xref="WormBase:CBN28392" /db_xref="WormBase:WBGene00190357" /translation="MECMPRLKSYIINNDSSGTSFTIPGTTECFPTVQALCDAHIAAK TQFPMGGQLIKGIGRRPWQLLLSDIEFPNPEIPLGSGSFGKVIKAKLLKPGGEKIDVA VKSSTDENSAEIYPEMYTEARAMRALTNPNIIHLEGVVVEKLPILLVIEFIEGSSLHG ALTKKKVSNVMRFPIVMGIIYGLVYMHQNSYIHRDIAARNVMVSHDMRTVKIIDFGLA KHALEMKALSACKIPVKWLAPETLTKWIFSTKSDTWSLAVTIWEIYHDGAEPYANVPA SAFEPKPCTPSNTPILEKNSAGNNNGKSKTKGTETRKRRKPAHLRDTRRKTVQRPELP FTDNLDYLPKEFVPMLNGMRAQRLRDRIELSYVADQVEKVIYPTLPEAVKAELKIHID KRPPFDPKFKVTVNIPSSMATEPTAPTTPVSKKNEVKEEPKIPKDTKDSNVVKVLKDT KDEKLFTGRRRTKKTEPGSSGAAPDKINNKVKTSRRKK" gene complement(<681488..>682283) /locus_tag="CAEBREN_20835" /db_xref="WormBase:WBGene00159560" mRNA complement(join(<681488..681853,682113..>682283)) /locus_tag="CAEBREN_20835" /product="hypothetical protein" /db_xref="WormBase:CBN20835" /db_xref="WormBase:WBGene00159560" CDS complement(join(681488..681853,682113..682283)) /locus_tag="CAEBREN_20835" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45724.1" /db_xref="WormBase:CBN20835" /db_xref="WormBase:WBGene00159560" /translation="MEEEKKENEPQQVSRPSDMCHIPIKVIDAVDGDEPIVIRDKDLV KYIGPLARAVGAYNPNWEEHAIDVLPVKIPFKKEHVLFMFDTVRKYQQPTNETRVEID YPETVDKDLDFLKDIMTLCQYCECDTLHGAIAYVAAQRLNNIDDVKVIADYFGFECDP NQSILDAKDGWMKVDYPE" gene complement(<682656..>685528) /locus_tag="CAEBREN_17190" /db_xref="WormBase:WBGene00155915" mRNA complement(join(<682656..682916,682966..683171, 683298..683431,683476..683575,683619..684575, 684815..685248,685311..685427,685476..>685528)) /locus_tag="CAEBREN_17190" /product="hypothetical protein" /db_xref="WormBase:CBN17190" /db_xref="WormBase:WBGene00155915" CDS complement(join(682656..682916,682966..683171, 683298..683431,683476..683575,683619..684575, 684815..685248,685311..685427,685476..685528)) /locus_tag="CAEBREN_17190" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45732.1" /db_xref="WormBase:CBN17190" /db_xref="WormBase:WBGene00155915" /translation="MLNQVQHVELNPIQEFLRGKDYEQKKQYFICTLPNESGKCGHFG TFSDLISHSAQHWHCHMFVCQVCSRQIYEYNEIYRHTDPANQQPCRASARQMTLNTSN RFGFVDLWKSRNVFISAISKGEYQRLKAMKKTGGGGRNTTSTPMYEEEDGEVLEVEDQ FGYDNNNYNHKPQNQVNRNFGGGSGRNANLEPLGTQRRSSRVRFDDESPSRGPPGINP RGAYQNQRSQSRAPNSDYNNPPRGDYQNQQNRGRAGFGNANGGGGNSYNNSWNNRNSN GGDASNPRNRNKSRGREGSGDFGGGSAIRNRSPSDDFRTPSNRQPYADRRAIHSNPPD PRMNQGADSIYRNQNNNNRSPPPSGGRSSNNSSMFRSPTPSPAKRPESHSNSGFRSPT QSPAKRSESHSNSGFRSPTPSQNEPGSSNPQYSRSPPDYSRPPPPLSTRGAHRSPPPP RKNSATRNLRNPQQPAYRSPSPPRSEINPPAVHRSPVPQDEEGFRVYCSPPPQETPAA TTGRPMTRSQLAAAGASQEPHGKATTDALKRKSAPIRTEESEERSGTIDLAIKKPDEM VRQRRSSINYRSISRGRSVSKGRDGSDDDQMKEIEKTRALYQIQGKSNVKVLHNTSRM SSLLSNPISSSSAKSRTNSLPPKKTAKLDRLRASILASTQEPEPPRTPLSTTFRHESV DNIPLPSPVSVSTTPPGTPGPSSSYSNPLKRLSTYRTPSPQPVPPPSCPPGISKRPRT QSEDDEDDVEIID" gene complement(<686117..>690912) /gene="Cbn-brc-1" /locus_tag="CAEBREN_01205" /db_xref="WormBase:WBGene00139930" mRNA complement(join(<686117..686365,686408..686575, 687427..687545,687658..687757,687807..687938, 688070..688411,689575..689673,689720..689971, 690292..690637,690842..>690912)) /gene="Cbn-brc-1" /locus_tag="CAEBREN_01205" /product="CBN-BRC-1 protein" /db_xref="WormBase:WBGene00139930" CDS complement(join(686117..686365,686408..686575, 687427..687545,687658..687757,687807..687938, 688070..688411,689575..689673,689720..689971, 690292..690637,690842..690912)) /gene="Cbn-brc-1" /locus_tag="CAEBREN_01205" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR017907 (Zinc finger, RING-type, conserved site), IPR001841 (Zinc finger, RING-type), IPR011364 (BRCA1), IPR018957 (Zinc finger, C3HC4 RING-type), IPR001357 (BRCT)" /codon_start=1 /product="CBN-BRC-1 protein" /protein_id="EGT45701.1" /db_xref="InterPro:IPR001357" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR011364" /db_xref="InterPro:IPR017907" /db_xref="InterPro:IPR018957" /db_xref="WormBase:CBN01205" /db_xref="WormBase:WBGene00139930" /translation="MSEQALKITNTVARLQKEMKCGICCSTFKDPILSTCYHIFCRSC MDACFERKRKVQCPICRTVLDKRSCRDSYQITMAVQNYLKLSEAFKQDIENLNTFRTL PPEKAFLESQMPLDVTIIPENDGKRCAPDFAIPLLPVRRKRTSRPSDEPTTSTAAPAP PNTDFHVFAVPKLIEKPAQKSEKPPVQAKKAANPAKIDAETSTNPLKIQTFDLRNVDI QEHIDLILKKMFAEYGQSVDEIDALFQLMPSMRPFLEKNANLLLHKLDMPTVVFPPSP PAKKTRKSLEKQEKRVSFANSQELEQHRYPDPSVSSEALEVVPQEEKDVKKVKNSARP TGNDEDEVVEDSEGEGDVENEGKGDEPMELGDENQENNAIEPADRTLVAVQTEAERID EELSRVPKTIVCSRIHNDEDEVELLSDFYHKFLSNACRFSEEVNSHTTHLVMMNSEGR TIPQKSTAYLQAIARKCIIVGRQWMVDCVSMGMLLAEADYTITTCTSAISAEIESNTE IGWLRSRNDAHGKLFQGCRFMILRKFTMNPYFDYKQLIDLVQLCGGEILSSYENQPPE NLYIIFSKHSKALEESRRMEQVYKCAVVRMEWVLDSISEYTILPTDAYRAVDSIGQHH Q" gene <692866..>695517 /gene="Cbn-acs-19" /locus_tag="CAEBREN_20822" /db_xref="WormBase:WBGene00159547" mRNA join(<692866..692919,693162..693872,694198..694640, 694689..>695517) /gene="Cbn-acs-19" /locus_tag="CAEBREN_20822" /product="CBN-ACS-19 protein" /db_xref="WormBase:WBGene00159547" CDS join(692866..692919,693162..693872,694198..694640, 694689..695517) /gene="Cbn-acs-19" /locus_tag="CAEBREN_20822" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR020845 (AMP-binding, conserved site), IPR011904 (Acetate--CoA ligase), IPR000873 (AMP-dependent synthetase/ligase)" /codon_start=1 /product="CBN-ACS-19 protein" /protein_id="EGT45757.1" /db_xref="InterPro:IPR000873" /db_xref="InterPro:IPR011904" /db_xref="InterPro:IPR020845" /db_xref="WormBase:CBN20822" /db_xref="WormBase:WBGene00159547" /translation="MSDVRVKFNLANEAVDEDIFNPPAPLIAGAHCSGLQSYHDMYRS SINNSDEFWRTVSSELHFEQGTSKGLEYNFDAKAGPVYCKFMDGAKTNLSYNCLERNI KRGLGDKIAYIFEGNEPTDVSTWTYKELHAQVVQFSAVLRAHGVKRGDVVALYLPMIP ELAVAMLACARIGAMHSVVFAGFSAESLAARVVDARCRVVVTADGVFRGAKPIGLKSI ADAACALAAQEDVKVEAVIMVEHLKRVTKPDGVELPKADYTTITFVYETEMQKCAGVD SPVEWMDAESPLFLLYTSGSTGKPKGIQHTTAGYMTYAYATTKFTFDAKDDDVYWCTA DCGWITGHSYLLYGPLMNGLKGIWYEGVPTYPTPSRMWDVTDKYGVTKLYTSPTAARA LMALGNKWLESTSRQSLKVIGTVGEPINPAAWMWLYKKVGLSNVSIVDTYWQTETGGH MITCLPGATPMKPGAAAMPFFGASPVLLDAEGRVIEGPGEGSLCFDRAWPGMMRGIYG DEQRFVKTYFAPFNGYYFTGDGARRDEDGYLWITGRVDDLMNVSGHLLSTAEIESALV AHEKVAEAAVVAAPHDIKGSFPYAFVTLNVGEKLNDKLVAELKKMVREKIGALAVPDV IQEAPGLPKTRSGKVTRRILRKIAEGSESGIGDTTTLVDESVIKQLISGRSGRA" assembly_gap 698877..698886 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <701779..>703394 /gene="Cbn-rpl-3" /locus_tag="CAEBREN_01072" /db_xref="WormBase:WBGene00139797" mRNA join(<701779..702143,702362..702497,702545..702985, 703131..>703394) /gene="Cbn-rpl-3" /locus_tag="CAEBREN_01072" /product="CBN-RPL-3 protein" /db_xref="WormBase:WBGene00139797" CDS join(701779..702143,702362..702497,702545..702985, 703131..703394) /gene="Cbn-rpl-3" /locus_tag="CAEBREN_01072" /note="contains similarity to Pfam domain PF00297; contains similarity to Interpro domains IPR019926 (Ribosomal protein L3, conserved site), IPR000597 (Ribosomal protein L3)" /codon_start=1 /product="CBN-RPL-3 protein" /protein_id="EGT45539.1" /db_xref="InterPro:IPR000597" /db_xref="InterPro:IPR019926" /db_xref="PFAM:PF00297" /db_xref="WormBase:CBN01072" /db_xref="WormBase:WBGene00139797" /translation="MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLT AFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYIDTPQGPRAL TTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIESDFAKLKKYCSSI RVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQIQVDTVFSQDEMID TIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHH RTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTINPMGGFPRYGLVNQDYLMLRGAI LGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRD FLAEAEAKA" gene complement(<704522..>742816) /gene="Cbn-tir-1" /locus_tag="CAEBREN_09654" /db_xref="WormBase:WBGene00148379" mRNA complement(join(<704522..704619,704691..704811, 704885..705919,721675..721786,722091..722468, 722665..722748,729716..729834,729876..730106, 730890..731267,731959..732081,732297..732432, 742728..>742816)) /gene="Cbn-tir-1" /locus_tag="CAEBREN_09654" /product="CBN-TIR-1 protein" /db_xref="WormBase:WBGene00148379" CDS complement(join(704522..704619,704691..704811, 704885..705919,721675..721786,722091..722468, 722665..722748,729716..729834,729876..730106, 730890..731267,731959..732081,732297..732432, 742728..742816)) /gene="Cbn-tir-1" /locus_tag="CAEBREN_09654" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR011989 (Armadillo-like helical), IPR021129 (Sterile alpha motif, type 1), IPR000157 (Toll-Interleukin receptor), IPR013761 (Sterile alpha motif-type), IPR001660 (Sterile alpha motif), IPR011510 (Sterile alpha motif, type 2)" /codon_start=1 /product="CBN-TIR-1 protein" /protein_id="EGT45671.1" /db_xref="InterPro:IPR000157" /db_xref="InterPro:IPR001660" /db_xref="InterPro:IPR011510" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR013761" /db_xref="InterPro:IPR021129" /db_xref="WormBase:CBN09654" /db_xref="WormBase:WBGene00148379" /translation="MMGEEILTERNQLSRQDASCFRSPRSPLGRTDDAFFEIDDDEFS SPSPPASPSSVDPPSITVPLPPKSAPPFPTQPAPTINGDHYPASGTGTPTILSNGTPL QQGRMSPAHSVTNLINESRLQQSLSTPCNGSEEEVHGQQRKDSEYRRFKSEGSTAGAS LPAAEKTHMDELSPVDQRSTGTTRFALMQQDSVVNPSVITKMSNTEQVAMMHTLKTKL SKYQLIFDKAFELINATADEKIIEGCTICIKLMKKAWITPKVSHDLANALCDYLRDRE YFDKLIKMFISNPPTTCDQVKLSCGKVLEECMSSSNRDYVVNKNYVKKIMTVAMKLTR TPEQQRLSLSLMESLFKHSNAVSLSYDIVILAWFSDMSPVTQGAKCHEQDVLCLIESD VIEHIILTFKRATGCPDILRHAALALANLALYSCFEGKKKIIQKKVPDWLFLLASQND EVTRYYACLAVCTIASVKEFEPAVVKSGTLKLVEPFLQAKEAATFAIEHHKYVQSRPK EWLMRLLPMLQSTRREARSVAAYHFTLEAVIKKEQNKLDVFQEIGAIQALKEVASSPD EVAAKNASEALTVIGEEVPYKLAQQVPGWTCADVQYWVKKIGFEEYVDKFAKQMVDGD LLLQLTELDLQHDVGMVSGLHRKRFLRELQTLKVAADYSSVDESNLDNFLMGLSPELS VYTYQMLINGVNRSLLSSLTDEMMQNACGITNPIHRLKLTQAFENTKHPDDVEVAMLS KQIDVFISYRRSTGNQLASLIKVLLQLRGYRVFIDVDKLYAGKFDSSLLKNIQAAKHF ILVLTPNSLDRLLNDDNCEDWVHKELKCAFEHQKNIIPIFDQAFEFPTKEDQIPHDIR MITKYNGVKWVHDYQDACMQKVVRFISGELNRTTPTTKEMPALSRKTTHQQRWQQTTS VNRTGISSRSINRAMEPPTPTFTPNGSQERATSTRRKIQSSISTVSDRTKNDM" assembly_gap 718974..718984 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 754154..754486 /estimated_length=333 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<763172..>767206) /locus_tag="CAEBREN_23569" /db_xref="WormBase:WBGene00162294" mRNA complement(join(<763172..763349,763427..763890, 764287..764820,765561..766209,766797..>767206)) /locus_tag="CAEBREN_23569" /product="hypothetical protein" /db_xref="WormBase:CBN23569" /db_xref="WormBase:WBGene00162294" CDS complement(join(763172..763349,763427..763890, 764287..764820,765561..766209,766797..767206)) /locus_tag="CAEBREN_23569" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR006098 (Methylmalonyl-CoA mutase, alpha chain, catalytic), IPR014348 (Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain), IPR006099 (Methylmalonyl-CoA mutase, alpha/beta chain, catalytic), IPR006159 (Methylmalonyl-CoA mutase, C-terminal), IPR006158 (Cobalamin (vitamin B12)-binding)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45828.1" /db_xref="InterPro:IPR006098" /db_xref="InterPro:IPR006099" /db_xref="InterPro:IPR006158" /db_xref="InterPro:IPR006159" /db_xref="InterPro:IPR014348" /db_xref="WormBase:CBN23569" /db_xref="WormBase:WBGene00162294" /translation="MYHQLLRPHLARCSTRPSSSGAYTRFPIDAKWAAMAKKAMKGRE ADTLMWNTPEGIPIKPLYLRADRDCDAQRSVELPGQFPFTRGPYPTMYTQRPWTIRQY AGFSTVEESNKFYKENIKAGQQGLSVAFDLATHRGYDSDNPRVFGDVGMAGVAVDSVE DMRQLFDGINLEKMSVSMTMNGAVIPVLAMYVVAAEESGVSRKLLAGTIQNDILKEFM VRNTYIYPPEPSMRIIGDIFAYTSREMPKFNSISISGYHMQEAGADAVLEMAFTIADG IQYCETGINAGLTIDAFAPRLSFFWGISMNFYMEIAKMRAARRLWANLIKERFSPKSD KSMMLRTHSQTSGWSLTEQDPYNNIIRTTIEAMASVFGGTQSLHTNSFDEALGLPTKF SARIARNTQIIIQEESGICKVADPWGGSYMMESLTDEIYEKALAVIKEIDELGGMAKA VASGMTKLKIEEAAAKKQARIDAGKDVIVGVNKYRLDHEQQVEVLKIDNAKVREEQCN KLNHIRATRDAEKAQKALDAITEGAKGNGNLMELAIEAARARCTVGEISDAMEKVFNR HAAVNRLVSGAYKSEFGETSEMSQVLDRVKSFADRDGRQPRIMVAKMGQDGHDRGAKV IATGFADLGFDVDVGPLFQTPAEAAQQAVDADVHVVGASSLAAGHLTLIPQLIGELKK LGRPDILVVAGGVIPPQDYKELYDAGVALVFGPGTRLPACANQILDKLEASLPPVSGK SASG" gene <770833..>771798 /locus_tag="CAEBREN_15048" /db_xref="WormBase:WBGene00153773" mRNA join(<770833..770976,771451..>771798) /locus_tag="CAEBREN_15048" /product="hypothetical protein" /db_xref="WormBase:CBN15048" /db_xref="WormBase:WBGene00153773" CDS join(770833..770976,771451..771798) /locus_tag="CAEBREN_15048" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45736.1" /db_xref="WormBase:CBN15048" /db_xref="WormBase:WBGene00153773" /translation="METQLKPTTEFQCVFTIKYTDTVESPLKINDMALLKKFPLLMEA VDAENPNWRTTPDAKIVVSKPIPFPFDQASLAFILCNIMEYEHPNSLEGGGDAAEHYP EAVQHTADQLKQICEAAHYLKCETFMHCIAFVIGSTKLSNVAPEKIADFLELKKEGQK AEQ" gene <772320..>775368 /locus_tag="CAEBREN_19123" /db_xref="WormBase:WBGene00157848" mRNA join(<772320..772466,774454..774826,774876..775006, 775054..>775368) /locus_tag="CAEBREN_19123" /product="hypothetical protein" /db_xref="WormBase:CBN19123" /db_xref="WormBase:WBGene00157848" CDS join(772320..772466,774454..774826,774876..775006, 775054..775368) /locus_tag="CAEBREN_19123" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45693.1" /db_xref="WormBase:CBN19123" /db_xref="WormBase:WBGene00157848" /translation="MPIAPDPSVTWICHVYIQFSDQTSQWPYVLNQVDIIESIPPFIN AVRKTNPRWKEFNTKVSKTFVVPYRREVGKFIFAFVNKYKDPKYYKQSEKRSQRLYPE ARDQSIEFLTDLINLAELWQLDTFRNVMGYCIAQHFIDTNASIDEIGRYLGGEITTAQ LEATIGKMRKEYAEGPKKPTLCFVPIKVRDTNTEFVKIPTRDHLVRMPYIFDMVRQLF PNWKTEPIKMAYPISLPYTKKQVNFFLDHIQDYDDPNNILEERRDTVYADVMKLPLHE MKVYLGFARFVKCRPFELAMRYVIKPHLKGLSREACNDLLKMTTD" gene complement(<776355..>777339) /locus_tag="CAEBREN_13634" /db_xref="WormBase:WBGene00152359" mRNA complement(join(<776355..777249,777326..>777339)) /locus_tag="CAEBREN_13634" /product="hypothetical protein" /db_xref="WormBase:CBN13634" /db_xref="WormBase:WBGene00152359" CDS complement(join(776355..777249,777326..777339)) /locus_tag="CAEBREN_13634" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45786.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN13634" /db_xref="WormBase:WBGene00152359" /translation="MSKSKLGFSTVSNKTKNIVASSNLKLKMVRLFVRQKCGMVLFFG WWGSLKHVGIEFLSDHVVAHALFDDDDSREYDFFRNWSSNNFRDYLEHILLVTSSSKQ IDEVIFLSRDIPVSFAYSNLKRIDIKKIQIATFCTHQYSRQILSRFLEVDSFILPHNP YETVTGSHGFLMRNLNDFRLDVYNNAFKFTLNDLLVSNSKNIVISWSGWTEKNVNRFL KLWIKGSNPNLKSVDIWFPREHLINQDIVLEGIVTHELGRRHFSYHPEEHRYGIKRKD GPLAALTIQSTHINIPHIQLDVDPDL" assembly_gap 777889..777898 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <779364..>780979 /locus_tag="CAEBREN_23094" /db_xref="WormBase:WBGene00161819" mRNA join(<779364..779455,780013..>780979) /locus_tag="CAEBREN_23094" /product="hypothetical protein" /db_xref="WormBase:CBN23094" /db_xref="WormBase:WBGene00161819" CDS join(779364..779455,780013..780979) /locus_tag="CAEBREN_23094" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001810 (F-box domain, cyclin-like), IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45538.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="WormBase:CBN23094" /db_xref="WormBase:WBGene00161819" /translation="MNGTNQRTFPLLRLPLTAQKNVLRNMEILYLFGFSLCSRAIKSL VKSLNITANGIILTFRGLCNLTMVFKNRTIRLIIGTNEELQGVLLQIEHLRSRTGQSL GADVVQALQFGKERPIIDWYLEYWKKPIFTVKDWLEHFMSLCHCRSIDCLQFINPAYS IDSIEENTKGIRFNVVDSSDVESRQYSQEVVKRFYHANTVILDDNIFETATETHGFLV QNFMKILSELQLGLNDLLVTNFSVLDCYDPNLSEKKLNRFLKLWKKGSNPNLTRLLIE TEWEPSAVNESLILSGLNSKIIPKSDVKIYEQRRALGRPYTLKIEEGFEIQRKDGTRA TIVFHKLSNFRFEFFVWF" gene complement(<783357..>784647) /locus_tag="CAEBREN_12033" /db_xref="WormBase:WBGene00150758" mRNA complement(join(<783357..784317,784556..>784647)) /locus_tag="CAEBREN_12033" /product="hypothetical protein" /db_xref="WormBase:CBN12033" /db_xref="WormBase:WBGene00150758" CDS complement(join(783357..784317,784556..784647)) /locus_tag="CAEBREN_12033" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001810 (F-box domain, cyclin-like), IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45663.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="WormBase:CBN12033" /db_xref="WormBase:WBGene00150758" /translation="MENIVQQTFPLLKLPVDALKNVLQNMEVLHLLGFSFCSKASLEL ATSVNLKAIYTSLHISDDSYFIINFQLTNIILNFCPKPNPSGQPIQLSELERVSGTVF GRGADVHWENFAHTARDLFQHVFSVFHLKKIRRVDFTKDTFEVESLKESFKGLEIAEI GFLEEEFAEIGIIDDSIPNEYAREVLSQFSHVPRFVIQRNPFETATQARKFYIQNLTG LRLYDTTSLTINDLLMSNCSRFSAFSSNLWSGKVLNRWLKLWRSGCNPNLRCFEIKIV NGRVEDVLKGLNAQTIPATKTRVFEQSDLDFTGERREKTRIRGGFDIRRSGGTCATIT LLEKVDAFNFAFYVWS" gene <787768..>790952 /locus_tag="CAEBREN_05952" /db_xref="WormBase:WBGene00144677" mRNA join(<787768..787859,787909..788055,790169..>790952) /locus_tag="CAEBREN_05952" /product="hypothetical protein" /db_xref="WormBase:CBN05952" /db_xref="WormBase:WBGene00144677" CDS join(787768..787859,787909..788055,790169..790952) /locus_tag="CAEBREN_05952" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45810.1" /db_xref="WormBase:CBN05952" /db_xref="WormBase:WBGene00144677" /translation="MGNFLCCPGGRCLNGRIAPEPRPEAADDLDFLKPEDAKWITAVK LTISDDQDKLEASLSDKNYTINIVRTEDPGKMRLLEKKSPATWVYYINCNAPGVLFYF PPLVDLEIRRVDAVEFKDLARTIGPDLVNYYEIFNAHTVSITKESVTSEELEFIRERF PRIQRFKVTATLPREEINFSLNYMEVKMFDGRGITMDDLRGIQCTRLEIHDTDLKASE LKELVYSWFKAECWQNLQCLVIRHVNADIPSDQFLRGYKTFTWKETKRGRYFVQDENI VFDCSEEKDIKRLNDEQVATVIFHKNTFRFYVWKELLPQMPRNGFTTVNRDAPNYLEF SEGETW" gene complement(<798371..>799180) /locus_tag="CAEBREN_09849" /db_xref="WormBase:WBGene00148574" mRNA complement(<798371..>799180) /locus_tag="CAEBREN_09849" /product="hypothetical protein" /db_xref="WormBase:CBN09849" /db_xref="WormBase:WBGene00148574" CDS complement(798371..799180) /locus_tag="CAEBREN_09849" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45789.1" /db_xref="WormBase:CBN09849" /db_xref="WormBase:WBGene00148574" /translation="MDRINGEWKLISHKGTEKYLKKKEDDDFNDIIFMYSNQLFKCDK KYLTQTQMIGTQKVSEQKTAFNLKSEHKGIVTTTCLNYNKLRTVNTRRIDETEKVDDV EERYMDADGHLVIVNQLYYKFEHRYTVLECARVYEKVKSDSDRKESIKDGVVGMWNLI AGRGIDESRQMDNLGKWATGYLLKFSHAQIFNEIQMQHMDIEGNVLKFNFAVITEEPK YTGTFLFDNSLVTVDGEARIVINVKDDKLFVTCRKNEHFSVAVYQKRSLLL" assembly_gap 801394..801403 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 807698..807707 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <807815..>808477 /locus_tag="CAEBREN_15328" /db_xref="WormBase:WBGene00154053" mRNA <807815..>808477 /locus_tag="CAEBREN_15328" /product="hypothetical protein" /db_xref="WormBase:CBN15328" /db_xref="WormBase:WBGene00154053" CDS 807815..808477 /locus_tag="CAEBREN_15328" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45841.1" /db_xref="WormBase:CBN15328" /db_xref="WormBase:WBGene00154053" /translation="MKQAQLIGSQKVFEQETTSNKKSIKEGAVSATWVTRNDLRTETK YTIGSQELDEIEERWVGNNQLIISNRMYWKTIENKYDVVECTRVYERVEPGHTQQSIK DQIVGSWRQIAMDGLKEFRENVEIKNPEAWNPEARLNFSHITIFNEIQMQHLDVNGES LKFEFAVISKEPKYTGTFFWENSLVTVNEEMRIVRCLKDDKLFVTCRKNEHYFVAVYE KC" assembly_gap 809034..809043 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<809892..>814260) /locus_tag="CAEBREN_06661" /db_xref="WormBase:WBGene00145386" mRNA complement(join(<809892..810254,810303..810672, 811434..811607,812306..813097,813584..813766, 813795..813980,814172..>814260)) /locus_tag="CAEBREN_06661" /product="hypothetical protein" /db_xref="WormBase:CBN06661" /db_xref="WormBase:WBGene00145386" CDS complement(join(809892..810254,810303..810672, 811434..811607,812306..813097,813584..813766, 813795..813980,814172..814260)) /locus_tag="CAEBREN_06661" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45593.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN06661" /db_xref="WormBase:WBGene00145386" /translation="MGLTLSRFSCAPCNRRREEAEDPEEDLFKVFKLVFSMEDNDVYI KKYELDAKWTMIVMDVDGLDHMDVMYRGKKYVFNLVLAAKNEDIGKLERAVLKKNYEN LVVDNFIGFEPRNRLPEHQKRHRLYYATRNAKCFCLSLNAETFLVSLRVSIQLSPLVA NFYYGPQHNRFQFLKNRIYHIIRPPCFLSLRFNDPDRDIRTAYFDTINLTYSVEINKP SVTAEELDYIGQIQILHILLLNTKIPLGYETFALKYRIAYIAHAERLTLAQLETVQCH YLFIGKSSFTSADMNQFMKSWMDKKLSPDFYMLHIKEFQKTKDLYQGLDFKLWDPEVR DSRFRIFDGTMRLDLSNSFDITREDGTVASFYPWSKNIFHFSVWFLNHFSVPPDVHDF DLNTPPELVDYSYWRLGRVSFIVLEFRKLCSQVNPEPPTRIFDASHMLVTFDKNGCVD VICNDLMHSFPVVPKGTGRNAIDINFPKESPLKTTLEHIVSRLRLMITDKCRFFINFN DPDQDIRDCVLPVNPSEVSRVGIGKPRVSKEELDYLMQQFSHVEFFVFGALPSKALKT FPYGFKQLMIGDEDGLTLEQLQNIKCECLVLMKSKFTSTDINQFLKNWLKKKTPKNLK LLRIHDFEASIDLFDGLDVQLWDPSLRSQFFPFMGLVSDCSSEAFVDIIRSDGKIGTI YQEAGAFGFSVWDEPFPELPEETVMVEEDDVFLALI" gene <819456..>820896 /locus_tag="CAEBREN_01564" /db_xref="WormBase:WBGene00140289" mRNA join(<819456..819547,819978..820244,820737..>820896) /locus_tag="CAEBREN_01564" /product="hypothetical protein" /db_xref="WormBase:CBN01564" /db_xref="WormBase:WBGene00140289" CDS join(819456..819547,819978..820244,820737..820896) /locus_tag="CAEBREN_01564" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45658.1" /db_xref="WormBase:CBN01564" /db_xref="WormBase:WBGene00140289" /translation="MNGSHQPTFRLLRLPVNDRKNVLRNMRVIDTWSISLCSKATKVL SMSINLKPKNCHLHLFQFVDFKLNFQDFIVHLQISPTREEQQVHDERHAHAIVTYTRG LDSESRVYRSSFTTAEDWDFYRMNSTRTGNRLVRLTIKGGIEIRRYDGTCVTVFVKSA NDRTGFELFVWS" gene <821361..>822692 /locus_tag="CAEBREN_08284" /db_xref="WormBase:WBGene00147009" mRNA join(<821361..821452,821765..>822692) /locus_tag="CAEBREN_08284" /product="hypothetical protein" /db_xref="WormBase:CBN08284" /db_xref="WormBase:WBGene00147009" CDS join(821361..821452,821765..822692) /locus_tag="CAEBREN_08284" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001810 (F-box domain, cyclin-like), IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45738.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="WormBase:CBN08284" /db_xref="WormBase:WBGene00147009" /translation="MDSSHQPTFPLLRLPVNAQKNVLRSMEIMDIWSLSLCSKTTKVL AKSINLKPKSCVVRLDGLVDSTVNSQDFTIQLQVYPDRNAQTMPNRKKQKADYVIITY TEISSSESKVYRSKNFKTAGDWFCHFSSIFHISSVNRLEMVQFCYFLSVKETLKRMEI RNIWIYETLQAVHARKILIPLSRAKSIILAKNPYISVYEKRRVLVQNWLGLNLNNEFL ITIDDLLMTNCTYLISWWSEWPQEMINRWLKLWRSGSNRNLKYLVLAIIGTDPNVILK GIKYQVVPESTVQIFDGNDMGDLRNRTEEVKGGFDIWRNDGVRATVAIKDHLDHWRFQ FCLWP" gene complement(<823721..>825610) /locus_tag="CAEBREN_05176" /db_xref="WormBase:WBGene00143901" mRNA complement(join(<823721..823765,823823..824543, 825120..825320,825510..>825610)) /locus_tag="CAEBREN_05176" /product="hypothetical protein" /db_xref="WormBase:CBN05176" /db_xref="WormBase:WBGene00143901" CDS complement(join(823721..823765,823823..824543, 825120..825320,825510..825610)) /locus_tag="CAEBREN_05176" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45837.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN05176" /db_xref="WormBase:WBGene00143901" /translation="MTSFYERLGNYLTYISCGNGYGRIEAPKDDLFEIFNAVHNPDED SELLLFNKSNTMKSWIAYQFSDSNGIKVVVGYGEPEQKWYTIRIVPTDREQDFGKLIQ TAPLTANFFYNCLENGLQTLSSRLYEILPSKTKTHTILTKEDMDIRDLCNFENALTSQ AIWLGKSNITKHELDFMYENFNNAVLIVINSAGMWPEGMGTFPLKFPQAMIASSIPMK LEDLMTMETRYLSLLNSNFTSMDINKFIKLWLEKKIPEKFTWLEVYGTMISKTLLQDL DVIPWDCKSRAKTNYLPNCGIIDFETAFDVLRDDGMLASLKVFPGVCHFVVWKERFPN DSEVQEVVTIDMADFIQHLQF" gene <829777..>831562 /locus_tag="CAEBREN_28790" /db_xref="WormBase:WBGene00190755" mRNA join(<829777..829922,829988..830059,830126..830381, 830426..830575,830623..830787,830853..830993, 831042..831293,831410..>831562) /locus_tag="CAEBREN_28790" /product="hypothetical protein" /db_xref="WormBase:CBN28790" /db_xref="WormBase:WBGene00190755" CDS join(829777..829922,829988..830059,830126..830381, 830426..830575,830623..830787,830853..830993, 831042..831293,831410..831562) /locus_tag="CAEBREN_28790" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45633.1" /db_xref="WormBase:CBN28790" /db_xref="WormBase:WBGene00190755" /translation="MEQTCSNTPKKLNDQGFSQKSRKIQNRPKQFNNQGSSQKCQKIQ NRSFDYTPKQINNQGSSQKSQKIQNRSFDNTNNRFNNQGASQKSIKSSRIPTNQIPRA DRSTWNMNQVKPTTPMALAPNYCVYDVSELSAAQRRLPPTFGSTRAPSPNVGNRNLNQ SSQRYPKPVVYPFAGAPIGAVPSVPAQIRPPQTSAPSATNTKIPGLDTNQSSQRFPKP VVNSFASVPTGAAPSVPAPVRPSALQAKQWPQTAPTNSKIHGFDTIQNNQTYPETVAL DSSTAGPPAQQSLQTRAAPTTTTTITIYGKKVDKSQSSQKLSQPVIPPMAEARAPQTA SAPTVVASLASSAPVGAAPGAPAPVVLPASTTPAQVSPQTAPTTNTKIVIFGKTADGK NTIQMTIDMQIVAGEALAGSDKPIQVIPQKILIAGKEFTLDGFSKRGDAPPK" gene <831726..>837277 /locus_tag="CAEBREN_13315" /db_xref="WormBase:WBGene00152040" mRNA join(<831726..831914,832303..832469,832517..832623, 832668..832780,832857..832976,833119..833516, 833567..833849,833915..834103,834268..834400, 835587..836038,836618..836935,837203..>837277) /locus_tag="CAEBREN_13315" /product="hypothetical protein" /db_xref="WormBase:CBN13315" /db_xref="WormBase:WBGene00152040" CDS join(831726..831914,832303..832469,832517..832623, 832668..832780,832857..832976,833119..833516, 833567..833849,833915..834103,834268..834400, 835587..836038,836618..836935,837203..837277) /locus_tag="CAEBREN_13315" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45709.1" /db_xref="WormBase:CBN13315" /db_xref="WormBase:WBGene00152040" /translation="MSQGVGADAPRPGGGVQELRLTETTNYIVIKLLRKAHDPRSDGV APIVVFTEFGRAVVTALWSPNQAKSSSSIGSMCPPTARSPSMMTAEALTDPNAVPTAL PNSVNTAIGATPSDLESQSGLSDTSAGSGRVSSNASTPLTAKAPTSPELIMNDLRRGS LFGRQGKVPQQYQPPPPSMTHPPSYTNVTFQHTNMATASQLSSVGQPLAFDQKSQKSG FSESTKTGIPMSAKSVPAAKSTAAAARSRLRSPGRRIEEIKKQEAKQKQLDEAAAAAN KDSSSKKSMKKSKKSKKSKKSGKLRFGGVHEDEGKSKKSMKLSKKSRKSLSKKGVKAP GDIDFPSPRSKSKKSQKVVKTSVYLPGVMDGNAPNKALKQDQPVKSQKSMKSSRKFNG IPGYHFPGAGKCTRSMDQVAPPTPKKAADQSHCVYDVAQLPAAQRRLPPTCVSGRAPP KSIFGNKKLIQSTHRRPKSVALPAPGAPGAPSVPGPVVLPASTTPAQVSPQTAPTTNS KIVIFGKTADGKNTIQMTIDMQIVAGEALGGSDKPIQVIPQKILVAGKEVPLDGYSQR VVPSSQLVEQPPKKVEVKNLDPDEKKMKHLIKKLKKEKAAPRPPSVPLDEKSRLLMDR VVKKPYPQRYRIKSKEELLMDEKSSFFKVSVPSKRGSVSNSQAAKKPVEKEEDPYADC PKLADVLKMSPCKGVFNDKDVPFWAEYCEPTESDMAGMDHAEAVNSEHIEMLQEKKFQ LKTVAEKVTLDAFQPLALLKDRDGRHFNEALVFSNTVRTVINIQNLTSEATSGQLRKR EAKLKAKNSKVTIPENVVPECYVYARSDPFTITRAPKATNTTNTAALGE" gene complement(<837559..>841177) /locus_tag="CAEBREN_13290" /db_xref="WormBase:WBGene00152015" mRNA complement(join(<837559..837701,837844..838180, 838449..838676,838828..839036,840124..840278, 841104..>841177)) /locus_tag="CAEBREN_13290" /product="hypothetical protein" /db_xref="WormBase:CBN13290" /db_xref="WormBase:WBGene00152015" CDS complement(join(837559..837701,837844..838180, 838449..838676,838828..839036,840124..840278, 841104..841177)) /locus_tag="CAEBREN_13290" /note="contains similarity to Pfam domain PF00685; contains similarity to Interpro domain IPR000863 (Sulfotransferase domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45552.1" /db_xref="InterPro:IPR000863" /db_xref="PFAM:PF00685" /db_xref="WormBase:CBN13290" /db_xref="WormBase:WBGene00152015" /translation="MRKNREFLLVLFLVVFILFYFITSRTSEDPYYSSVRRDKFIGGG DDGNDESEEEHSHQLAVPSDVGYNRSSPFIFIGGVPRSGTTLMRAMLDAHPEVRCGEE TRVIPRVLNLRSQWKKSEKEWNRLQQAGVTGEVINNAVSAFIMEIIVGHGDRAPRLCN KDPFTMKSAIYLNELFPNAKYLLMIRDGRATVNSIISRKVTITGFDLNDFRQCMTKWN AAIQIMVDQCEQVGPNCMKVYYEQLVLHPEAQMRKISEFLDIPWDEKVLHHEQLIGKD ISLSNVERSSDQVVKPVNLDALSKWVGTIPEDVVREMDSIAPMLRKLGYDPNANPPNY GKPDELVAKKTEDVHRNGAEWYKKAVQVVNDPARVDKPIVDSEALKL" gene complement(<847577..>848553) /locus_tag="CAEBREN_00635" /db_xref="WormBase:WBGene00139360" mRNA complement(join(<847577..847935,848050..848398, 848506..>848553)) /locus_tag="CAEBREN_00635" /product="hypothetical protein" /db_xref="WormBase:CBN00635" /db_xref="WormBase:WBGene00139360" CDS complement(join(847577..847935,848050..848398, 848506..848553)) /locus_tag="CAEBREN_00635" /note="contains similarity to Pfam domain PF04658; contains similarity to Interpro domain IPR006751 (TAFII55 protein, conserved region)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45741.1" /db_xref="InterPro:IPR006751" /db_xref="PFAM:PF04658" /db_xref="WormBase:CBN00635" /db_xref="WormBase:WBGene00139360" /translation="MSLPPGLRPPLKRGPKPQYIEETVPVQSSDDPPDFESHVVLRVP EDCVSRIEKIILSEGGKHEDFAINLNADARHSTVRIGNQLLSGKILDLPTITEVHKTL DNKSLYKVADVSQILVCTHDSINSIASTSAGLSDATEDPQKLAKKAARQWQYPHGLTP PMKSARKKRFRKTKKKKFMDAPEVEKELKRLLRADLEADSVKWEIVEGNAADVGGVTD EGVTHHHRSERHVNYPSSSDDESDIFEEDEKDD" gene <849236..>852251 /gene="Cbn-elpc-2" /locus_tag="CAEBREN_16726" /db_xref="WormBase:WBGene00155451" mRNA join(<849236..849364,849463..849979,850251..850855, 850926..851247,851447..851577,851626..851806, 851851..>852251) /gene="Cbn-elpc-2" /locus_tag="CAEBREN_16726" /product="CBN-ELPC-2 protein" /db_xref="WormBase:WBGene00155451" CDS join(849236..849364,849463..849979,850251..850855, 850926..851247,851447..851577,851626..851806, 851851..852251) /gene="Cbn-elpc-2" /locus_tag="CAEBREN_16726" /note="contains similarity to Pfam domain PF00400; contains similarity to Interpro domains IPR019781 (WD40 repeat, subgroup), IPR001680 (WD40 repeat), IPR015943 (WD40/YVTN repeat-like-containing domain)" /codon_start=1 /product="CBN-ELPC-2 protein" /protein_id="EGT45674.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR019781" /db_xref="PFAM:PF00400" /db_xref="WormBase:CBN16726" /db_xref="WormBase:WBGene00155451" /translation="MKIKEEFISASVNPRSHCLVACKSAPFVVYASSLQIALQTIPKN DSEVGVIKSTSERRHQKPITTLKRLKSTSKIDEFISGDVNSKVVLWRLNGEQVEYVAE LTGCSGSVGTVCGCVEDDRKVVAAAWVSYPNNGFEAWWTSPSGEVVHSTKIELDHKAF ALCLDAISIENSVLLAVGTSKRFVELYGETEDRKGFTRLISVAGHTDWIHSIAFNDNP NHLLVASAGQDTYVRLWSIEPDHVTSTEELESLDSMEQLPDELTSSANLFQFNNSSFR CSSHAVMQGHDDWVHSTVWSENGRVLLTASSDKTCIIWREIDNLWRDDVRLGIVGGQA AGFFAAVFLNSSSRSDEDTVVSSSYFGGLHCWKSSDEQRTFWTSLPMTGGHVGEVRDV DWHGSFLLSVGQDQTTRAFAKSQKQDVYLEIARPQVHGHDMQCLSFVNPSVFVSGAEE KVFRAFRAPKSFVKSLESITGIPTEKSFGSSQLAEFGACVPALGLSNKPMIEGETVDG EHWEEDAFRAAPTVLKAAPTEDTLQQNTLWPEEHKLYGHGYEVYAVTANPNGTVLATA CKSSHVEHSVVMLWNTADWSKKADIIGHQLTITQIAWNPSGTRLLTVSRDRTAKLYKE KTGNVDGFDYECVWTSGKQHTRIIWACDWLDDHRFVTASRDQKVIIWTSEGDPLAQIK FEEPVTAVAATGDLVVAGLQTGELVVLRIAGDTLEVLEKVGANLIPIDAAVLRLRFSK CGKKLAVATTDAKLRVIDFSQ" gene complement(<853241..>854134) /locus_tag="CAEBREN_06053" /db_xref="WormBase:WBGene00144778" mRNA complement(join(<853241..853450,853507..853906, 853962..>854134)) /locus_tag="CAEBREN_06053" /product="hypothetical protein" /db_xref="WormBase:CBN06053" /db_xref="WormBase:WBGene00144778" CDS complement(join(853241..853450,853507..853906, 853962..854134)) /locus_tag="CAEBREN_06053" /note="contains similarity to Pfam domain PF00076; contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45551.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="WormBase:CBN06053" /db_xref="WormBase:WBGene00144778" /translation="MPRGGGSEDQKVYVGNLPGDVRDKEVEDIFHKYGRIKYIDIKSG RGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPGGRPLNDDGGYS GGRDRGDYRGGRGGGRGGGPQRRTGYRVIVEGLPPTGSWQDLKDHMREAGDVCYADVA RDGTGVVEFTRYDDVKYAVRKLDDTKFRSHEGETAYIRVREDTSSGSGGGDRGRSRSR SPRAERRASPKYSPRRQSRSRSRSRSRSRSASRSPSRSPSPN" gene <854704..>857368 /locus_tag="CAEBREN_15237" /db_xref="WormBase:WBGene00153962" mRNA join(<854704..854731,854781..854935,854983..855123, 855482..855840,855889..856032,856097..856650, 856848..856975,857153..>857368) /locus_tag="CAEBREN_15237" /product="hypothetical protein" /db_xref="WormBase:CBN15237" /db_xref="WormBase:WBGene00153962" CDS join(854704..854731,854781..854935,854983..855123, 855482..855840,855889..856032,856097..856650, 856848..856975,857153..857368) /locus_tag="CAEBREN_15237" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45708.1" /db_xref="WormBase:CBN15237" /db_xref="WormBase:WBGene00153962" /translation="MPNEIEENSVLENSGKKKWITCAILLLVNLLNYIDRYTIVGTMT RLATYFEINDKDQGLLQTVFIVFYMIFAPLFGYLGDRYNRKMLMISGISVWILAVFAS SFCGEKHFLLFLLCRGIVGIGEASYSTIAPTVLSDLFSGALRSRVLMMFYFAIPVGSG LGFMVGSWISLATDSWQWGVRFSPIIGIACLLLMFTLLEEPVRGACDGARQSGDDASW WDDCKYLYSVKSFFMVTAASIAALFSIGAMSWWTPKFLGYSYALIERIPKTPADEETR IATIFGIITCMSGILGVATGSVLSRAWRDGRSIFKNHASEKADVYICAYSMFIALPFL FFSILSAEYSMNLCLVLIYFAIMSMCMNWAVNVDVLMYVVVANRRASALAVQTMLAHM FGDASSPYLIGMLSDSFRGDDESNVARFFALQKALYLPTFLLVIAGAFYLAATFYVET DRREALFQMDAPDAYRDPNDPEDMDSLLPEVVEGREEQPAQIIHTMTHSGESTIDEND IEKLPSDDEDTDELINESNSIQKPLPRIPRKSGGADAENEAYLSDETDEWDVQKREEE DGEDGEVL" gene <858010..>860558 /locus_tag="CAEBREN_13623" /db_xref="WormBase:WBGene00152348" mRNA join(<858010..858082,858272..858404,858449..858563, 858627..858731,859040..859806,859976..>860558) /locus_tag="CAEBREN_13623" /product="hypothetical protein" /db_xref="WormBase:CBN13623" /db_xref="WormBase:WBGene00152348" CDS join(858010..858082,858272..858404,858449..858563, 858627..858731,859040..859806,859976..860558) /locus_tag="CAEBREN_13623" /note="contains similarity to Pfam domain PF00168; contains similarity to Interpro domain IPR000008 (C2 calcium-dependent membrane targeting)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45747.1" /db_xref="InterPro:IPR000008" /db_xref="PFAM:PF00168" /db_xref="WormBase:CBN13623" /db_xref="WormBase:WBGene00152348" /translation="MKPRRAPVIVKALDEGFERPRQEIDPYDDVQLEKVLKELSLIRI KLDHIVMPGVNPFIQNLHRHREFFGFQLEYSFPCLDVVSKSLKSTVRIPEKKVDAMKI VFNHKRIVLLDMHHDQVEHWQKAQLTMHLLVNMAVNGKQTTRPLAKCHIRLVDLIFPP YIIHREFDFVGEEFEGTAEICIDLRSRVNSLMEKLKNLRDERSLEDTFVVSDKSQARR TRSRSSSRCRAHSSASSEGPSTRVRAPSARRTMSATSMSTSTPVETPVLTPRTAFIPP TARVPNPRIPDLRIPEARISDHHFLKPSNTGIIRPRIASNSSNGSDSVFARSSSSDKP RILEDVEVLNPPPTRERTTRTVTESYGASTVGDTVEEITRKGGKYYMEVTVHEAIGLP PVEDESGRITSPSSFISILGRDGDLRSPVFRNSRDPRWNFIARFAISSERRNLVIKVN HRGVLGDTALGYVTIPLPTTNVRRSVYEMTDVTMMAVKYTSQVPMLTISLEKIRNIDD DEDVENSERHVVETVVTERRTSSRSSASTPRDTDFYASRFFKAPPSRVDSPPILESSE VIKERLKRSVADLERDLETMTKGKK" gene <860935..>870578 /locus_tag="CAEBREN_09953" /db_xref="WormBase:WBGene00148678" mRNA join(<860935..860997,861476..861619,861676..861769, 861853..862180,862371..863034,863207..863565, 864045..864234,864405..864511,864555..864641, 864683..864758,865301..867689,867866..868316, 868657..868825,868871..869129,869401..869771, 869820..869979,870146..870437,870485..>870578) /locus_tag="CAEBREN_09953" /product="hypothetical protein" /db_xref="WormBase:CBN09953" /db_xref="WormBase:WBGene00148678" CDS join(860935..860997,861476..861619,861676..861769, 861853..862180,862371..863034,863207..863565, 864045..864234,864405..864511,864555..864641, 864683..864758,865301..867689,867866..868316, 868657..868825,868871..869129,869401..869771, 869820..869979,870146..870437,870485..870578) /locus_tag="CAEBREN_09953" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001263 (Phosphoinositide 3-kinase, accessory (PIK) domain), IPR000403 (Phosphatidylinositol 3-/4-kinase, catalytic), IPR013838 (Beta tubulin, autoregulation binding site), IPR015433 (Phosphatidylinositol Kinase), IPR018936 (Phosphatidylinositol 3/4-kinase, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45711.1" /db_xref="InterPro:IPR000403" /db_xref="InterPro:IPR001263" /db_xref="InterPro:IPR013838" /db_xref="InterPro:IPR015433" /db_xref="InterPro:IPR018936" /db_xref="WormBase:CBN09953" /db_xref="WormBase:WBGene00148678" /translation="MRDIEDFVFTNKQCLAVCIAKNENTKLTQINQLLPLDDKEEEFE SQPLSHNVRCSLIGIANFLLNSHGKFAEELMPMLLRALSALPHMKWIDDGLLNKSDRI PIQEQFAFCFNTCLSDLAAHLPRFREQIVAAQADALACAVSSVYDIMEDKENLEHNYS HIIKLMCYVLGLTRSIGRFSTDYDTPLISLIFPLPMDETKQLKGDTAREIIHRISSDE FAFDTPENSEAILRDETRLIRMYNKLGASFVVHNFTGGLKLQLGAHDLEKLFDSVQRL MDSNFLELLDEISGDIFQNGGSVKRNPYKSMSEIVNLCCLTLLKDVLGPYTIAKDEEE SPVSEKFAKEISVFSKNALQRLDSELQGLSHSAEATTSSEMSRQKLNIQSATVSLQLI AWAAIDDIDADTICTEIISRLFANQSQRTIISQLPLYLKAISSMATLAEKFPAVATTA VNQNLQRFLLEPAPMLTKLASDSTLERGKSAGDVLQNSKSSNNLMDSVSRRKLALDSL RNAAIKAICRALKSSIRMESDSVQQCLAGLSTKLFVCSNASNFVVSLVCENAIQTLGG IGVGLVDSTAAEVPEMVVQIYLQRFANPPSQLDVTMIRCLAEMWIAGARQIYENVWKL FTQICIESSNRVYSQGNSESNDQRYTHVSLAVDVAMSRMADGVKNEDDKQTLLIRLLE LFVQLGIEGRRVGEKVSKSTVKMSTSAGNLGVLMPKIASLLRRMQPISESSPKLRSLF RDFWFYCTVLGFDVESSSLWPEEWYNAVCEVATKTPVLIATENLRSELIDNAAIRSDS ISPQELQDMRNKVLNELGHQAEAVPLINRFDFANCTYLLSVHRMESMRLIHANHIDAF SSFFKYIEDKTVRKDKSGLWTCMLAAAPRIFLGWCEKMKTRRDSDEPTEEALVWHAQF LLFKFNHHLREVRKVADACLSTLVQSFPYLLWNSKVLTTILRLLQGLEDNLQKDPTCR EPQFTIDGLEKREWTIQLQDSIEGRRSVVKDFSMRVKQILKEALRWAPASTHSNLLEY VSKFGSERDAAMQLAIDATSEGSGKSGSYLTSLYKRSNYLGQVKGMLATTLSGDIDQV TAENSLIDRLEKDFQRACQSGKDNEMEQAVLLLTALFVSLRSVNERILTLLVRTPLHN FTESTISLCTMAWNWLLSARPEAHSLFLHEQARAFADSCRFNLGLFEKENVDMSLSPL CRQVERPPPSPNFRPHREWIEFISERCDVASYSSREQIDVLEMMFSQILSAQIGTGHL HGSSSEASNPAANVSAPARKETVPQITRAIEAVGVRFRLLSVVLHMVQQDACLTRPTN ILIRQRVYASAFHYFTIAPQGPTQSEEALRNDIKCLAKFFEHLKNDRHYMTKGIVAQT DKNMVMASTMSNIPTVFEKSLLFSGGTVTSGANGTPTTTLMLPPSTNYANTLTLSSQK TMAAASASIRSGKTIEQKLSAEEEKRVLSWCKQQRLLMLLVANEIERLSAWLHPLALG QEECALESETYLRSQLLDIQAPATDENKKKKKVWREQVDLAWTISPELLIQMPTRFRG SQDLVKLVEATVRSQPELVAHIPEALPIYLEGGSVVFESSDMSHVLTWSRCSPVMALS LLTPRIYPTHPISVQYAVRVLRSYPADALLMYIPQIVQAVRYDTMGYISELMIWLAGH SQLLAHQLIWNMQTNMYTDEESKIKDPTLFDPLNDIMQKIISQLEGAARRFHEAEFKL FHQLTAISGTIKPFPKGDARKKACLKALADVKIETITYLPSNPEAVLLDLDYSSGTPM QSAAKAPFLARFRVKRCGVRELERIGLQAQSENNNKKSEDADLDNLRKVQDSRVCWQA AIFKVGDDVRQDMLALQLMQLMKNVWAGLGLPVRVFPYRVVATSPGCGVIECVPNSKS RDQLGRQTDFGLYEYFKTQYGDESSETFQEARRNFVRSMAAYSVFSFLLQIKDRHNGN IMIDLDGHIIHIDFGFMFESSPGGNLGFEPDFKLSEEMVAIMGGKMEAAPFRQFASLC VHAYLAVRPYHKSFVSLVSLMLDTHLPCFRGKTINQLRARFAPEMNEKDAAKYMHSVI TNCFLNIRSKMYDQLQYFQNEIPY" gene complement(<870749..>871155) /locus_tag="CAEBREN_13990" /db_xref="WormBase:WBGene00152715" mRNA complement(join(<870749..870873,870993..>871155)) /locus_tag="CAEBREN_13990" /product="hypothetical protein" /db_xref="WormBase:CBN13990" /db_xref="WormBase:WBGene00152715" CDS complement(join(870749..870873,870993..871155)) /locus_tag="CAEBREN_13990" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45775.1" /db_xref="WormBase:CBN13990" /db_xref="WormBase:WBGene00152715" /translation="MYSLVFLLDNNKMGATIVKLINEDSSVDRNDDNDFDLEQGESPD STSWDSDDSTTDDFSVEERTGMTPNPNDPYIVEKRFVAGSNEYFYNIVKRK" gene <871911..>877153 /gene="Cbn-tim-1" /locus_tag="CAEBREN_00693" /db_xref="WormBase:WBGene00139418" mRNA join(<871911..871992,872199..872352,872462..875241, 875415..875828,876169..876716,876980..>877153) /gene="Cbn-tim-1" /locus_tag="CAEBREN_00693" /product="CBN-TIM-1 protein" /db_xref="WormBase:WBGene00139418" CDS join(871911..871992,872199..872352,872462..875241, 875415..875828,876169..876716,876980..877153) /gene="Cbn-tim-1" /locus_tag="CAEBREN_00693" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR007725 (Timeless C-terminal), IPR006906 (Timeless protein)" /codon_start=1 /product="CBN-TIM-1 protein" /protein_id="EGT45591.1" /db_xref="InterPro:IPR006906" /db_xref="InterPro:IPR007725" /db_xref="WormBase:CBN00693" /db_xref="WormBase:WBGene00139418" /translation="MNVLIQGAVQALGYLEDGKYHREPDCYETIRDLIRYLREDGDDH TARIECGRHNLVEHDLVPMIKCDDLSDDEFDIAIRLMVNLCQPAIATMRGKAPADRDQ WKMYWELEENLRRAKCAFTDAHFFVAIKKRIDNYFIETDVDDRDERLRLVVERIVLLV KYVFSINQDSTEGRRTRIEDSSHDRVILAFLESGIDKTLMHIANQPREKEFHITILDI FALILKEQCPENLSKPDDSEFSAAEKKKTEEDFRKIIENHVVQQTQKRKSFSRFGGSY TIQGLKGISSNSNQVVFKPIQNVEKHNFLDERKTKKRVARNRRPFEVDSNVHLASSEV RNMLRDMVIRLIETCFNRLMKSAKSTVFVQGHALQKSSQINYFFMVKFVLKFVRMSKE LTLFERISECIGVEAFHENNVQLTEYVENAITLKGVEAKSFGLKAQYALGAYNELVLI HRHIYENAKEELEKKRARRALEHIVNVEEYRELPISIIKKFSSAVLSNNFLRELILTT HHYMKLVERFVKTGALKKVTKKVKVRKNQTKKKRTEEDERSQFDLMTSDQLEELWEES KDRLLKILSGELQEYADMNPITLETDRESQQKFARLSIQRSLRSRGFPAAVGLFHASK KLWPEAFKSKSLGSSEDPENPENSENDPQEELAELYTILKSDMKAIAREFKKATLDPY SKIDKLTSEALESFWSEAKLQIPAILESITEEDHVNPLNWQLEVSPEAQQQFAMLAIQ RSLRFNNLKKAIGLYHASRKLWPSENIFGHEGISSEEEIAELEGILKADLTEVAKELK IAEGVANEKMNSLEDLGIDGGAEYSGNSEDEEETPAWKVEEIDFQFDMYVSKFANVDV LKWYVFLLNDFSKNSVELNQALVKMLHRIAFDLKLPTKLYQISLFQVFQKVNEHFTHL SKELRKSSPLFELYQFGFHLLKKFFQKFSEMGEEMAVEVLFWKGPRECFEIENGYGSW IKNKEAEIKVWTEEMETELRNLYDEYKSIESSDGIDVLDFIEHNLSRARTRKQIAKKL IEFGLDLLGAKWKNIGKSEMDAVLPVGDILKWYEEWKTDGSEGDIVEILKKKLMESIG SEVSRKKIIKQLAHMDILYEKPKKERPLPEWDQALIEELKQLKEQYEEFDDAENMLGV DIVRYVMKRLSEKKPTRQVERYLASMGAKIVEQPKKPRSSQPKTSKKSKDAFLNDSSE EEPVIREDSEDEEAEEPMIPAEKSIAKKRAIVESDDEDEVAMETESTEKSKEKSPEKP KSSPKNTLMSRIALNSKKRKFAQLESDSESSDSDDEDKLEEIVKKKKKVVVADSDSDR DDDIYKRSYTHSLLTSGSVAGGILSREPSEEKEKTPDEEEEDPFTAKLTFKRRIVVSD NEDED" gene <879036..>880655 /locus_tag="CAEBREN_00830" /db_xref="WormBase:WBGene00139555" mRNA join(<879036..879328,879637..880039,880087..880193, 880238..>880655) /locus_tag="CAEBREN_00830" /product="hypothetical protein" /db_xref="WormBase:CBN00830" /db_xref="WormBase:WBGene00139555" CDS join(879036..879328,879637..880039,880087..880193, 880238..880655) /locus_tag="CAEBREN_00830" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45595.1" /db_xref="WormBase:CBN00830" /db_xref="WormBase:WBGene00139555" /translation="MPATTDFKTAAYEMLITYDIKELIPGFTKESVVEADARKLMIKA KVEEFKADRMDGGGVSRYMIGTCGQLVSKVAYKLQDGWKESEKKKVVQNDLVYNHLMD PSPGDTVYIRATFLHSQSGIDHLHFAIEADPKKKIIFGLGSSSLAVFKAKKPSGRGAA DKNQGDGSSGREASTSSSSGHRLNDPSSSRPPASLGEARLEPGPLANASILRRPSTEG ITDAKRRRRHVSFAEIDSGKQREASFMLVNVQTSHPKVDKSLARMLEPFRVMPEEVHH EALPIAKRNSFVFYFKVSTSAGCSHVENMIEARRWHQRFHIKNLCSSNPEPFFSPALP MESIIAAIFLSQRIVHQYALDSDGGDLTEQLSDKDLLAATLKDTAVRKQVMEGLNKRG ATIAEKMLKPAASK" gene complement(<886467..>887608) /locus_tag="CAEBREN_24598" /db_xref="WormBase:WBGene00163323" mRNA complement(join(<886467..887400,887517..>887608)) /locus_tag="CAEBREN_24598" /product="hypothetical protein" /db_xref="WormBase:CBN24598" /db_xref="WormBase:WBGene00163323" CDS complement(join(886467..887400,887517..887608)) /locus_tag="CAEBREN_24598" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45545.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN24598" /db_xref="WormBase:WBGene00163323" /translation="MSASDLSTFPLLKLPIEAQKLVVRMLLRLHQLTLSTFNESTKQL VASSGITCEWFYFSLNPGTQIGIGYDDGDFVVLEFEEAFPGEYRKLNQSCITARYEFG EDDYEDDVHEWNKESFVVRDWINHLFQVLNRTHIDVMFSSDTTYQLSDIQWTFKIFKI KEIQAEFGSISLPTLLENLPPVSTVGCRCRNWISDKEFSKILVQNYEEVQPGIDQKIT IDHLLLSNCVRFEAFNHNLTPRDLNRFLKIWMNSKLCTRLRYLYVRFCPKSRSNDFSR IMCGIKYQMSNEKRVFQTGRKYVNEPHTIDVNRGINIYRKDGTEATVMITLVRNSYPK FEMLIWS" gene complement(<888234..>891816) /locus_tag="CAEBREN_05563" /db_xref="WormBase:WBGene00144288" mRNA complement(join(<888234..889161,889543..889693, 890794..891503,891725..>891816)) /locus_tag="CAEBREN_05563" /product="hypothetical protein" /db_xref="WormBase:CBN05563" /db_xref="WormBase:WBGene00144288" CDS complement(join(888234..889161,889543..889693, 890794..891503,891725..891816)) /locus_tag="CAEBREN_05563" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45721.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN05563" /db_xref="WormBase:WBGene00144288" /translation="MSSNNLSTFPLLQLPIEAQKHVVRLMDRLHQLTLSTFNDNTKQL VTSSGITCDYFTVSLFPTTRITIRFVGAIICLEFEEGESHDYKELNQSSITAKYGIYL KGPDQDEVHVLNKKRFVVRDWIKHLLQVLNRTRIDAVFNCNASYQTNAILRTFKTFTV HRVRTGFRSMSILTLLENLPPVTRVDFSEPIADKEFSKILAQNYGGLSPDVSQKITLN HLLSCNCVYLNISNHDLTTKDLNRFLKIWKNSTLCTRLVYLQVNLSPKSRRSSRKDGT SINLKSAYSPTMSASDLSTFPLLQLPIEAQKLVVRMMYKLHQLTLSTFNDNTKQLVTS SGITCENFSVSLKPDTQIGLGYDNGDFILLEFEEVYYDEHIELNQGCITAKYEIGEDG YDDDVHEWNKCNFVVRDWIEHLLQVLNRTHIDSVFSSDATYQLSDIQWTFKIFKIEKV QAEVKSIRVPTLLENLPPVNRVEFRDWIPDKEFSKILLQNYEGLQPGMDQKITLDQLL LSNCVRFEAFNHNLTPRDLNRFLKIWMNSKLCTMLRYLHVRFCPKSRSNGFLRIMNGI KFQLSNEKRVFQIDRQYGNEPYTKDVNKGATIYRKDGTEATIMITLVRRNYPEFQMFI WS" gene complement(<894669..>895965) /locus_tag="CAEBREN_16612" /db_xref="WormBase:WBGene00155337" mRNA complement(join(<894669..895614,895874..>895965)) /locus_tag="CAEBREN_16612" /product="hypothetical protein" /db_xref="WormBase:CBN16612" /db_xref="WormBase:WBGene00155337" CDS complement(join(894669..895614,895874..895965)) /locus_tag="CAEBREN_16612" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45826.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN16612" /db_xref="WormBase:WBGene00155337" /translation="MSDNNLSTFPLLQLPIEAQKHVVRLMDKLHQLTLSTFNDNTKQL VTSSGLTCAHFYVSLFPTIKMTIQFCVDSVINLEFETELIDDEYRRLNQSAITARYDT HLKNPDNDEVHVWDKESFVVRDWIQYFLRVLNRTHIDSVLNCVFFYEIMDIRRTFETF SVHRLQTGLFSTHILTLLENLPPVNHVDFSEPIADEEFRKILVQNYDALVPYESQKIT LDHLLSCNCAHLETSYRGLTPKDLNQFLKIRMNGTLCTRLRYLQVNLWPKSNNNNNNN DFTQIMKDINYQTSNENRVFEFFREYRTLPTPRNVFRGMNINRMDGTEATLVVSLNEI NHMRFEMFIWS" gene <896674..>897785 /gene="Cbn-dpy-17" /locus_tag="CAEBREN_01064" /db_xref="WormBase:WBGene00139789" mRNA join(<896674..897091,897142..>897785) /gene="Cbn-dpy-17" /locus_tag="CAEBREN_01064" /product="CBN-DPY-17 protein" /db_xref="WormBase:WBGene00139789" CDS join(896674..897091,897142..897785) /gene="Cbn-dpy-17" /locus_tag="CAEBREN_01064" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)" /codon_start=1 /product="CBN-DPY-17 protein" /protein_id="EGT45776.1" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="WormBase:CBN01064" /db_xref="WormBase:WBGene00139789" /translation="MSVFAGYAACTLGAVSMLLCVSLVPQIYQQVAMLRDELTTEMEA WRVESDQLYMDMQKFGRVRRQAGGYGGYGGYGSGPSGPSGPSGPHGGFPGGPNGGFPG GNTGSSNPPTLPGVIGVPPSVTGHPGGSPINPDGSPSAGPGDKCNCNTENSCPAGPAG PKGTPGHDGPDGIPGVPGVDGEDSDDAKAQTQQYEGCFTCPAGPQGPPGSQGKPGARG MRGARGQAAMPGRDGSPGMPGSLGPVGPPGAAGEEGPTGEPGADVEHQIGLPGAKGTP GAPGESGDQGEQGDRGATGIAGPPGERGPQGEKGDDGPNGAAGSPGEEGEPGQDAQYC PCPQRNAAAAVSGNQGYRN" gene complement(<898394..>902364) /locus_tag="CAEBREN_24544" /db_xref="WormBase:WBGene00163269" mRNA complement(join(<898394..898607,898754..898909, 899034..899108,899336..899778,899884..900153, 900408..900594,900641..900697,900745..900801, 900852..900984,901041..901139,901211..901461, 901895..>902364)) /locus_tag="CAEBREN_24544" /product="hypothetical protein" /db_xref="WormBase:CBN24544" /db_xref="WormBase:WBGene00163269" CDS complement(join(898394..898607,898754..898909, 899034..899108,899336..899778,899884..900153, 900408..900594,900641..900697,900745..900801, 900852..900984,901041..901139,901211..901461, 901895..902364)) /locus_tag="CAEBREN_24544" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45782.1" /db_xref="WormBase:CBN24544" /db_xref="WormBase:WBGene00163269" /translation="MADEENPESLQPTAYDSPSAAEQQRQEPADMDIDEDERPTEHVQ QEYVAEDVAEIPENSQNPPAISEEEAQEKSRIQKESFLEIFRIAPRVKDILPDLRIFM SHPDVIEWDRKEVEMLVEIRIQEEKAKKKAERAASKKNVEGGAEKPPVALADAIRSAT GIDLAGILQKVPNLQPSSIPSNPAPGQLPMSGVPNFSGPPPSIAGPGAHFTGPPPPMG APMGITPPTSQPGLPVITRVNPDDSSITSLGVPVSNDYVLPPNHTTKVPHIAVLVNKI SQFLTIFPIFQNLCKTQIKSIGRGKAGFNTPHPNDIPAELRHAKTKPDLVAPIPDELR LQLGRPEEKVSVPAIPNELLPPEQRVYDNLPVVFLRPPMRKTLFLAGARFGKRADRIK KEEKKSGKSKNKKKKREEEATGEENEPTRANYRSNHPPPVKKPRQHPLTGMNALPAGL NKNSPLPVKRYHARQLAKDTGMSLEEAMAEIEEQCREFGGEDTPLAKEHDERAMEIIK KHGDEQWNKRYNYVPADHSAGIPGVDRPPSGLPPKKDREPPPARREDREPIPGVDMPP GGGARREPVPGIDRPPGGGLGFGFPAPEKKRARGGVKERERKKRREEFSMRGGGRGGG YDRYGGYDDRKRDYGRPYGEYDRQGRHGYNDYGGRYNDHRGGYGQDDHQGYDDYYGRQ NAGSYDDYSNHYDSRYHQGGGEHGYDQYGAEGETSAETTEHYYTGAGGHEGHPPPSTS ADTYYQEDGGQYYNHYYSTATEDATTSSGAAALPETSQPPPPLETTPTKMSAYLAKFG PGRAA" gene complement(<902712..>903684) /locus_tag="CAEBREN_11972" /db_xref="WormBase:WBGene00150697" mRNA complement(join(<902712..902918,903089..903250, 903296..903397,903443..903580,903625..>903684)) /locus_tag="CAEBREN_11972" /product="hypothetical protein" /db_xref="WormBase:CBN11972" /db_xref="WormBase:WBGene00150697" CDS complement(join(902712..902918,903089..903250, 903296..903397,903443..903580,903625..903684)) /locus_tag="CAEBREN_11972" /note="contains similarity to Pfam domain PF00335; contains similarity to Interpro domains IPR018499 (Tetraspanin), IPR000301 (Tetraspanin, subgroup)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45582.1" /db_xref="InterPro:IPR000301" /db_xref="InterPro:IPR018499" /db_xref="PFAM:PF00335" /db_xref="WormBase:CBN11972" /db_xref="WormBase:WBGene00150697" /translation="MSLCTFIARVFIFFLNLAQVLVGLTVIALTLWIRFDKSFESEIR ANILRDTDPEPLAGVKSDIRTGILVAFWIIIGFSIANVLIGFVGVIGAFVRSRFILAP YLLSMIILFLLEIAVGITALVKRKSVRRTVKEYVFDAYNMNAQPDISAFTFRYNCCGA DNLPNVNCFAGQPTCSSAVWDRLDFTMMIFGITMLCIVVVQAFTALITVPVVIEQKRE VSYQ" gene complement(906112..906183) /locus_tag="CAEBREN_27038" /db_xref="WormBase:WBGene00187649" tRNA complement(906112..906183) /locus_tag="CAEBREN_27038" /product="tRNA-Thr" /db_xref="WormBase:CBN27038" /db_xref="WormBase:WBGene00187649" gene <916403..>920107 /locus_tag="CAEBREN_19832" /db_xref="WormBase:WBGene00158557" mRNA join(<916403..916489,916573..916847,916895..917012, 917332..917414,917501..917758,917925..918036, 918149..918298,918763..918860,919023..919112, 919162..919594,919811..>920107) /locus_tag="CAEBREN_19832" /product="hypothetical protein" /db_xref="WormBase:CBN19832" /db_xref="WormBase:WBGene00158557" CDS join(916403..916489,916573..916847,916895..917012, 917332..917414,917501..917758,917925..918036, 918149..918298,918763..918860,919023..919112, 919162..919594,919811..920107) /locus_tag="CAEBREN_19832" /note="contains similarity to Pfam domain PF01457; contains similarity to Interpro domain IPR001577 (Peptidase M8, leishmanolysin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45555.1" /db_xref="InterPro:IPR001577" /db_xref="PFAM:PF01457" /db_xref="WormBase:CBN19832" /db_xref="WormBase:WBGene00158557" /translation="MKPRLHLLNLFLFSIFLPNFTSTLPCSYQNPRIEDILLEVPIEH EHRHRHRRNSITESTTESPEKIKFAPLRIQLHFDKSIQNLTQEVQNFVNTTLLPEAVG YWENALRVRPMKTPIRLRRKCISSFYYYKQGMRNVACDKGCRERTTCGEADIPVDHLL DCLACNNTDDCETTGKMGEGVKDSDFILYVTAHNSKRCEGPETLSYAAHCQQEADFDR PIAGNVNLCPNALSVHNHDYEILTSTVKHEILHALGFSVGLYAFFRDENGKPRTKRNR YGRPTSLNKQKGYYDWDSNTITTVLREDWWTGEGKVIHPIHMMVTPKVREEARRHFGC DKLEGAELENQGGEGTYLTHWEKRAYENEAMTGTHTQNPVYSRLTLAFLEDTGWYQPN YEVAEDLHWGKELGCDFAMKSCGEWIHEKRILGQDAYPYCSDIKHDGTKSMAITRCTS QRDSLALCNLIPFQKELPSQYRNFMSLPGVNPDGAKYYGGSVEMADYCPFLQEFEWKL IDKEQHKDSRCELEGNGKEGEDILEVYGENSKCFEFPKPWTERKCGRIRVLSHYMAGC YEYQCTNGTLYVGSYNATDMYPCYAENQKVHIKKVVDGWLREGSLICPKCSDYCNNCG PPIVIPDYIGDPELDEPCSAISQFLSSHLAVLCYLVFLYIRS" gene 917163..917246 /locus_tag="CAEBREN_26824" /db_xref="WormBase:WBGene00187435" tRNA join(917163..917200,917210..917246) /locus_tag="CAEBREN_26824" /product="tRNA-Tyr" /db_xref="WormBase:CBN26824" /db_xref="WormBase:WBGene00187435" gene complement(917797..917869) /locus_tag="CAEBREN_26425" /db_xref="WormBase:WBGene00187036" tRNA complement(917797..917869) /locus_tag="CAEBREN_26425" /product="tRNA-Asn" /db_xref="WormBase:CBN26425" /db_xref="WormBase:WBGene00187036" gene 918628..918699 /locus_tag="CAEBREN_26567" /db_xref="WormBase:WBGene00187178" tRNA 918628..918699 /locus_tag="CAEBREN_26567" /product="tRNA-Thr" /db_xref="WormBase:CBN26567" /db_xref="WormBase:WBGene00187178" gene 919672..919743 /locus_tag="CAEBREN_27030" /db_xref="WormBase:WBGene00187641" tRNA 919672..919743 /locus_tag="CAEBREN_27030" /product="tRNA-Thr" /db_xref="WormBase:CBN27030" /db_xref="WormBase:WBGene00187641" gene 920376..920448 /locus_tag="CAEBREN_27205" /db_xref="WormBase:WBGene00187816" tRNA 920376..920448 /locus_tag="CAEBREN_27205" /product="tRNA-Asn" /db_xref="WormBase:CBN27205" /db_xref="WormBase:WBGene00187816" gene 922235..922306 /locus_tag="CAEBREN_27094" /db_xref="WormBase:WBGene00187705" tRNA 922235..922306 /locus_tag="CAEBREN_27094" /product="tRNA-Thr" /db_xref="WormBase:CBN27094" /db_xref="WormBase:WBGene00187705" gene <922459..>926793 /locus_tag="CAEBREN_01561" /db_xref="WormBase:WBGene00140286" mRNA join(<922459..922716,922763..922942,923141..923323, 923373..923482,923535..923684,923729..923818, 923869..923963,924011..924132,924442..924846, 924904..925052,925099..925197,925533..925735, 925920..925988,926039..926130,926178..926258, 926614..>926793) /locus_tag="CAEBREN_01561" /product="hypothetical protein" /db_xref="WormBase:CBN01561" /db_xref="WormBase:WBGene00140286" CDS join(922459..922716,922763..922942,923141..923323, 923373..923482,923535..923684,923729..923818, 923869..923963,924011..924132,924442..924846, 924904..925052,925099..925197,925533..925735, 925920..925988,926039..926130,926178..926258, 926614..926793) /locus_tag="CAEBREN_01561" /note="contains similarity to Pfam domain PF04547; contains similarity to Interpro domain IPR007632 (Anoctamin/TMEM 16)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45652.1" /db_xref="InterPro:IPR007632" /db_xref="PFAM:PF04547" /db_xref="WormBase:CBN01561" /db_xref="WormBase:WBGene00140286" /translation="MLAATTEVDYPYFPFRISIDFVLVHNAAESHSKGKYRGYFEKAV QKEGLIIRHQQSGQTHFTLISTPFHRLSREAESSQMCFPLKDCQVKPGMPSCCIPLSQ IFVTDDTVRFINAPFQRKHGALFVNYHDEKAFFTPAQRGYLTYQILTKIDISKDLKYG MLGESQDNEVPSTSSITSDEQLRRKGLTWLLMRDVYEEAFVLHAPSKEEPYFKEMQNG SLKTYNEFISEIELDPRKSLSNAWERLYKFQPLNKIRDYFGEQIAYYFAWQGTFITLL WPAVIFGFVVFIYGFIDSISSSPLDWNHCKVVNFRGETENVACGMRNGVTLFFSMLTQ WFMSSFDTKMNAFFAVFMSIWGSVFVQIWKRNNSVLSYQWNSDDFHAIEPDRPEFRGT TMKEDPITGEDIWISPALFRYLKMFGSFFFVSFSMLLVILSLMLVTLLKIWMVYNFQC NKEYTFHCWLSAAFLPSVLNTLSTMGLGAIYSNLVARFNTWENHRTESEHNNSLIVKI FAFQMVNTYTSLFYVAFVRPESHGLQPNGLFGLGEEFKDTCLDDTCSSLLALQLLTHT LIKPVPKFLKDVVIPYFVKLFRLRMYTSRTEATRVEAEEDDQANVLVREWLKPSAGDF VLWEMNEKIIMFGTTMMFASLFPLSPLLALIIGFVDMRIDAHRLIWFNRKPIPMITNG IGIWLPILTFLQYCAVFTNAFIVAFTSGFCSTFFSDNEYCTVQNRLIIVIVFQNLVFG LKYLLSSVIPSVPASIKVALRKKRYVVAHIMEKGDVPHKTRIKKRTRIAKLAWITSNQ RVQRGKKKEKQQNKKRLLAAAEE" gene 924275..924358 /locus_tag="CAEBREN_27331" /db_xref="WormBase:WBGene00187942" tRNA join(924275..924312,924322..924358) /locus_tag="CAEBREN_27331" /product="tRNA-Tyr" /db_xref="WormBase:CBN27331" /db_xref="WormBase:WBGene00187942" gene <927074..>928453 /locus_tag="CAEBREN_00591" /db_xref="WormBase:WBGene00139316" mRNA join(<927074..927221,927419..927516,928035..928240, 928336..>928453) /locus_tag="CAEBREN_00591" /product="hypothetical protein" /db_xref="WormBase:CBN00591" /db_xref="WormBase:WBGene00139316" CDS join(927074..927221,927419..927516,928035..928240, 928336..928453) /locus_tag="CAEBREN_00591" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45696.1" /db_xref="WormBase:CBN00591" /db_xref="WormBase:WBGene00139316" /translation="MRSFLLFLLLISLALAKIDHVKEKTSETHGDATKLKAKEAPEHI DHKKLFAENFKQRVSEHKAAIDSIKGIGKDKRRRFLEDLHENTALFADLSLSFSEFFE TKVQKDRKLKTLLVWAYNYSIKTGIFDSETERKVNLMAQQHELIEKDEKFFNTYDKER AKETMKAEEAQRKQKKSQKAENKQPKGEL" gene <929081..>935814 /locus_tag="CAEBREN_24543" /db_xref="WormBase:WBGene00163268" mRNA join(<929081..929274,929324..929709,934537..934731, 935114..935333,935382..935674,935720..>935814) /locus_tag="CAEBREN_24543" /product="hypothetical protein" /db_xref="WormBase:CBN24543" /db_xref="WormBase:WBGene00163268" CDS join(929081..929274,929324..929709,934537..934731, 935114..935333,935382..935674,935720..935814) /locus_tag="CAEBREN_24543" /note="contains similarity to Pfam domain PF00560; contains similarity to Interpro domains IPR001611 (Leucine-rich repeat), IPR003591 (Leucine-rich repeat, typical subtype), IPR008162 (Inorganic pyrophosphatase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45574.1" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR003591" /db_xref="InterPro:IPR008162" /db_xref="PFAM:PF00560" /db_xref="WormBase:CBN24543" /db_xref="WormBase:WBGene00163268" /translation="MEPHKYTLTELRKLQDDDELDLSARAIKDFPNGIVQLTRLTKLD LNHNSLTVLPDLFCKMTRLIRLDLGKNKLHHLPNDIGNLTNLQHLTLFDNQIEDLPLS FAKLKSLKYLDLKKNPLNPRLLALAGACNTTAECEKAAKQVVDVYMGEQLKKLEKQKE QEAKLFMKVQKAKEEEKIRKYREKKEAEAKQKEEKDAKQREAAANQKAHHQQAHHHKE QQHQNQQSQQQKSKKDASPKGQKHDDNAKKAPKPRGFFGSLFSLLYTCIWYLGLILIT SATVAIALDCKGMGNTVPGNQPLCKDVSSLLSFNKPSATFGKNIRNSYSTVFTGYHNQ AKPHLAPISKWISKKWSEFVKTDIGKQVEQVLYKIHAFIVDTWVKVQRFVVKQWNALQ AWWKKDGKRQFGPALDGFVMGMKMVLNVVIDIATNIGALFVHFAGRVKTFFLAWSDGG FNAAMNTLNH" gene <936445..>937651 /locus_tag="CAEBREN_08944" /db_xref="WormBase:WBGene00147669" mRNA join(<936445..936536,936580..936841,936887..937323, 937492..>937651) /locus_tag="CAEBREN_08944" /product="hypothetical protein" /db_xref="WormBase:CBN08944" /db_xref="WormBase:WBGene00147669" CDS join(936445..936536,936580..936841,936887..937323, 937492..937651) /locus_tag="CAEBREN_08944" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45750.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN08944" /db_xref="WormBase:WBGene00147669" /translation="MAEQPKPPPTLWDMPELPMTTIIQYLGPAATVNFAQTYPHVENF IKTLNLNVESISVDIAVRRCEIRLVFFYSEKMLTWKFSVPNEEKEEEDNKTKKTYKKK KTTIIEKCQNPTALLRERVEWLTALVRFPVSNVHIVGPAYPASEALLDWTQIHQCENL HMDLISETTGSLVPFNDLERLELASCEFLRPGDLRELEIQDISIFSSNWTSEDLSHVI RDWVAGGNRKLETLTVNLKNNYEPGVVLAGLETKEWDREKRQKDYPREDPYVAIDCES ARDIERADGLLASILIEHCFLTFVVWHKRFQDSEEEKMEE" gene complement(<937885..>939523) /locus_tag="CAEBREN_06918" /db_xref="WormBase:WBGene00145643" mRNA complement(join(<937885..938207,938310..938649, 938749..938893,939032..939153,939357..939412, 939463..>939523)) /locus_tag="CAEBREN_06918" /product="hypothetical protein" /db_xref="WormBase:CBN06918" /db_xref="WormBase:WBGene00145643" CDS complement(join(937885..938207,938310..938649, 938749..938893,939032..939153,939357..939412, 939463..939523)) /locus_tag="CAEBREN_06918" /note="contains similarity to Pfam domain PF00076; contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA recognition motif, RNP-1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45576.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR012677" /db_xref="PFAM:PF00076" /db_xref="WormBase:CBN06918" /db_xref="WormBase:WBGene00145643" /translation="MSGGYKQSGLPNERSQRSVFVGNISYDVTEDTIRAMFSKAGPVM SIKMVHDRETGKPKGYGFIEFPDIQTADTAIRVLNGHELGGRILRVDSAAGGMNMEEF GQPNAGPAIVEENPYGPECDAGKAPERISQTVASLAPEKMFELMKQLQEALKNNPAEL NSVLVENPQLSYAVLQAAVVMRIVDPQTALSLLHRNKAATQQPFHMAGPSVGNGGPPM SMSQQQQQMPPLPLPTKPNFAHPNPPMRPPMDHPNMPQQFGQPMVPPQQQQPHYMQQQ PIPLPQHRPQGPPVGGPGPSGGHVPQDNHEERANADLLMQVMQLSEHDLSMLPPGDRD KIIELRQQLKRNVR" gene <948864..>954256 /gene="Cbn-unc-64" /locus_tag="CAEBREN_17011" /db_xref="WormBase:WBGene00155736" mRNA join(<948864..948877,950071..950170,950568..950667, 951219..951479,952393..952715,954173..>954256) /gene="Cbn-unc-64" /locus_tag="CAEBREN_17011" /product="CBN-UNC-64 protein" /db_xref="WormBase:WBGene00155736" CDS join(948864..948877,950071..950170,950568..950667, 951219..951479,952393..952715,954173..954256) /gene="Cbn-unc-64" /locus_tag="CAEBREN_17011" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR006011 (Syntaxin, N-terminal), IPR000727 (Target SNARE coiled-coil domain), IPR006012 (Syntaxin/epimorphin, conserved site)" /codon_start=1 /product="CBN-UNC-64 protein" /protein_id="EGT45700.1" /db_xref="InterPro:IPR000727" /db_xref="InterPro:IPR006011" /db_xref="InterPro:IPR006012" /db_xref="WormBase:CBN17011" /db_xref="WormBase:WBGene00155736" /translation="MTKDRLAALKQAQSEDEQDDDMHMDTGNAQYMEEFFEQVEEIRG SVDIIANNVEEVKKKHSAILSNPVNDQKTKEELDELMAVIKRAANKVRGKLKLIENAI EHDENQQGAGNADLRIRKTQHSTLSRRFVEVMTDYNKTQTDYRERCKGRIQRQLDIAG KQVGDEDLEEMIESGNPGVFTQGIITDTQQAKQTLADIEARHNDIMKLESSIRELHDM FMDMAMLVESQGEMVDRIEYNVEHAKEFVDRAVADTKKAVQYQSKARRKKIIILIVVT IIIVILALWLIQYIPGI" gene <956835..>959703 /locus_tag="CAEBREN_00475" /db_xref="WormBase:WBGene00139200" mRNA join(<956835..956896,958197..958211,958382..958490, 958926..959087,959635..>959703) /locus_tag="CAEBREN_00475" /product="hypothetical protein" /db_xref="WormBase:CBN00475" /db_xref="WormBase:WBGene00139200" CDS join(956835..956896,958197..958211,958382..958490, 958926..959087,959635..959703) /locus_tag="CAEBREN_00475" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45647.1" /db_xref="WormBase:CBN00475" /db_xref="WormBase:WBGene00139200" /translation="MRNTKQESVPEQCTKGKKAALSDSWDCLMKYLPRGPHNPELTKE LNQMKWCMRELSNGQNVKDFIFILFYIFAYTALVVWQLHIAFQRTFRAIDAFLNILFI GLAAVPIGMSLKLPLSPVSKAHSPDIFKLHKSIGPE" gene <959969..>960061 /locus_tag="CAEBREN_11584" /db_xref="WormBase:WBGene00150309" mRNA <959969..>960061 /locus_tag="CAEBREN_11584" /product="hypothetical protein" /db_xref="WormBase:CBN11584" /db_xref="WormBase:WBGene00150309" CDS 959969..960061 /locus_tag="CAEBREN_11584" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45755.1" /db_xref="WormBase:CBN11584" /db_xref="WormBase:WBGene00150309" /translation="MSLFNTTYTNVFTLQDFAGLASKMVSGLTF" gene <960406..>962726 /locus_tag="CAEBREN_22237" /db_xref="WormBase:WBGene00160962" mRNA join(<960406..960436,960493..960587,960707..960881, 960925..961043,961995..962198,962243..962420, 962462..962574,962619..>962726) /locus_tag="CAEBREN_22237" /product="hypothetical protein" /db_xref="WormBase:CBN22237" /db_xref="WormBase:WBGene00160962" CDS join(960406..960436,960493..960587,960707..960881, 960925..961043,961995..962198,962243..962420, 962462..962574,962619..962726) /locus_tag="CAEBREN_22237" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45743.1" /db_xref="WormBase:CBN22237" /db_xref="WormBase:WBGene00160962" /translation="MPDIVLTPMTSSHYENVEAAPPIPKQDQETQKFDDNKLRNLLLN LYLIHCLILAMPCVIASVSAVVKDWPKNVFSLDSLNIIVTILFVMIIVPQLWIQRKRI RCYNRSVTVTNFDDIAIIKRLVKETGNFVHVEVAERGKAFAKIIFRSRGSVKKFMEKI VKIEGVIAEEGENDFEISNTISTGKFVALLAQIRNAEMLINSEQMLKSVPLSMWINVY CLVVSVLSIPGSMETYGKSNLLIFFYCAFICFSVVGILFGIKVWYQLVKDSKLDGKKI IVEGFEDADAALCAVDIARVTSVEFLYKSKLTLVTLPNRVATAVMKDNFENEGLNVYH VDAISI" gene complement(<963156..>968760) /locus_tag="CAEBREN_32508" /db_xref="WormBase:WBGene00194473" mRNA complement(join(<963156..963204,963259..963453, 963878..964422,964467..964631,964970..965323, 967201..967477,967521..968543,968591..>968760)) /locus_tag="CAEBREN_32508" /product="hypothetical protein" /db_xref="WormBase:CBN32508" /db_xref="WormBase:WBGene00194473" CDS complement(join(963156..963204,963259..963453, 963878..964422,964467..964631,964970..965323, 967201..967477,967521..968543,968591..968760)) /locus_tag="CAEBREN_32508" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001214 (SET domain), IPR007728 (Pre-SET domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45641.1" /db_xref="InterPro:IPR001214" /db_xref="InterPro:IPR007728" /db_xref="WormBase:CBN32508" /db_xref="WormBase:WBGene00194473" /translation="MMRRNTPTGQEVIEILELANWDDQEVIVYDEPGVEEIRLSDDED NEEDEDDIMVIDEVIVVDDEDSPEIVEEESPYRAVQNEHRAFPDLEILEDEDPNRAVQ NENHVDSDVEILEDEDLIESVQNKHRPDTPDVEILEDEDLIEAVQNKCRPDTPDVEIL EDEDPIEAVRFQNRRVTPLDGVSEDEELIEAVQIEHRPASREEEVVEDEDPIEAVQIE QRPAAPDEQILEDEEPDPDLRASPHIEMVENNEQEEQDENQAPHRENLDPLRNKADRP EKRNSPFSLDSSPIKSSPKQRRTRAILSDNQEKEDDPIESESRHFRESCSLNTSSVRK TPEVSQRKKSQKRTPQNVVVPPAGMEPTPTSVSRKRKATGFVNRERSKAKSPRDDQEE EDGTQETDPERALLKRPVIVVIDKNLKSEKLIKNRVIRVKKYKFTIPKLCTEAEQGQK HGKWERELGAWPGVPNKKLMKDQIPKYGQGQDWPVQYVYESENPTKYKVLYEGWTNDS IGDCPKDEIVRTAPDRVKEMNTRNEFYRTMREIMVAHRDRFNDEDISDMEPDNIFMLY LDLSYFHSRKNEEYGMSSIWYMHIKKESKKELLKDVLPPRFAYTPLNILNAESYEFLR RRKQNTHWDKLKDGIKLCIGPRDYKGPCKNGKGCKCDARYTLLYGEADDFNGHRFSKN IIPREDGTIDVTQFNIKDTRVIMECSDVCGCDSQCPRRQLQRGQQKPLMVFHENEDKG FGVRAAADIKSGEFICEYTGIARCAERIDFDHDEHAFLSTKNSSKNAQKKKEPEKDDT AKPYAEEEEINKLVWDTEWEKKRDDMSYEARFNLMDTSMVISANFVGNIARFINHSCD SNTAFMEVFSRRYETDVLVPRIAVYAIKDIRKGEEVTTNYYANHKVEKSSVRCRCGTK ACKVYLPNGCT" gene <969080..>971256 /gene="Cbn-npp-18" /locus_tag="CAEBREN_18790" /db_xref="WormBase:WBGene00157515" mRNA join(<969080..969154,969389..969499,969552..969613, 969662..969729,969781..970168,970479..970735, 971117..>971256) /gene="Cbn-npp-18" /locus_tag="CAEBREN_18790" /product="CBN-NPP-18 protein" /db_xref="WormBase:WBGene00157515" CDS join(969080..969154,969389..969499,969552..969613, 969662..969729,969781..970168,970479..970735, 971117..971256) /gene="Cbn-npp-18" /locus_tag="CAEBREN_18790" /note="contains similarity to Pfam domain PF00400; contains similarity to Interpro domains IPR019781 (WD40 repeat, subgroup), IPR001680 (WD40 repeat), IPR015943 (WD40/YVTN repeat-like-containing domain)" /codon_start=1 /product="CBN-NPP-18 protein" /protein_id="EGT45590.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR019781" /db_xref="PFAM:PF00400" /db_xref="WormBase:CBN18790" /db_xref="WormBase:WBGene00157515" /translation="MTGDKKDPPVEPYKTVGAHRDLIHCVTFDPHGRRMATCASDMTM AIWDRQSNGTWRRSAHWKCHGGAVWRVIWAHPEFGQIVATCSYDRTIVVWEEQIVRSE KDSKAKESQWIRRTIISDNRSDVTDIAFSPRHMGLMMASCNVLGSIRIYEAPDIVDAS RWNLIHELQAFHTRCGCVAWSLSRMHRPLIAVGSDEKKAGGKERVVIYENIDGLRKWQ RIHSLIFDMPCPITDLKFSPIAMVDSHQLAVASGDVHIYNLKVAKSAIIEEEGHDNPL VLSDYSLTRVAMLGDHRKAWRIRYNLMGSVLSSTSLDGTLRSWKSLFVNQWVKLSEMN VDDYVPSPEEVRAIVASKTTERLPTDIESAFF" gene <972621..>976651 /locus_tag="CAEBREN_01953" /db_xref="WormBase:WBGene00140678" mRNA join(<972621..972780,972823..972976,973163..973355, 973543..973709,973757..974047,975349..975512, 975714..976069,976352..>976651) /locus_tag="CAEBREN_01953" /product="hypothetical protein" /db_xref="WormBase:CBN01953" /db_xref="WormBase:WBGene00140678" CDS join(972621..972780,972823..972976,973163..973355, 973543..973709,973757..974047,975349..975512, 975714..976069,976352..976651) /locus_tag="CAEBREN_01953" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR016066 (Alpha-D-phosphohexomutase, conserved site), IPR005843 (Alpha-D-phosphohexomutase, C-terminal), IPR016055 (Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III), IPR005846 (Alpha-D-phosphohexomutase, alpha/beta/alpha domain III), IPR005845 (Alpha-D-phosphohexomutase, alpha/beta/alpha domain II), IPR005841 (Alpha-D-phosphohexomutase), IPR005844 (Alpha-D-phosphohexomutase, alpha/beta/alpha domain I)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45697.1" /db_xref="InterPro:IPR005841" /db_xref="InterPro:IPR005843" /db_xref="InterPro:IPR005844" /db_xref="InterPro:IPR005845" /db_xref="InterPro:IPR005846" /db_xref="InterPro:IPR016055" /db_xref="InterPro:IPR016066" /db_xref="WormBase:CBN01953" /db_xref="WormBase:WBGene00140678" /translation="MPLKCPNLNEQVANWLLWDKNEKTRAEIQKLVDDLDEEGLKARM GTRLVFGTAGVRSPMQGGFGRLNDLTIIQITHGFARHMINVYGQPKKGVAIGFDGRHN SRRFAELAANVFIRNNIPVYLFSEVSPTPVVSWATIKLECDAGLIITASHNPKEDNGY KAYWSNGAQIIGPHDTEIVRIKEAEPQPRDEYWDLSELKSSPLFHSADVTIDPYFEVE KSLNYTRSINASTPLKFTYSAFHGIGYHYTKRMFAEFGFPAASFISVAEQQEPNPDFP TIPFPNPEEGRKVLTLAIETADRNGSTVILANDPDADRIQLAEKQNGEWRVFTGNEMG ALITWWIWTNWRKANPDVDASKVYILNSAVSSQIVKTIADAEGFKNETTLTGFKWMGN RAEELRAEGNHVILAWEESIGYMPGHTLDKDGVSAAAVFAEIAAFLHTEGKTLQDQLY ALYNKYGFHLVRSTYWMVPAPEVTKELFSTLRADLKFPTKIGEAEVASVRDLTIGYDN SKPDNKPVLPLSTSSEMVTFFLKTGSVTTLRASGTEPKIKYYIELITPPGKTQNDLAS VISELDQLEKDVVATLLRPQQFGLIPRK" gene complement(<976911..>978186) /locus_tag="CAEBREN_20101" /db_xref="WormBase:WBGene00158826" mRNA complement(join(<976911..977868,978098..>978186)) /locus_tag="CAEBREN_20101" /product="hypothetical protein" /db_xref="WormBase:CBN20101" /db_xref="WormBase:WBGene00158826" CDS complement(join(976911..977868,978098..978186)) /locus_tag="CAEBREN_20101" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001810 (F-box domain, cyclin-like), IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45606.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="WormBase:CBN20101" /db_xref="WormBase:WBGene00158826" /translation="MAVVVHSFPLLDLPPDELRCVLKLMGSLDQIAFSLISKPTKSLI RDVPKKPLLTVCLFIQNYIHLNIAFPKLWKTASWQLSPKYENRNVNSVEWAVTEQVKV EYFDPDEDGNGNILWRKKGFGAKEWLKHIMEVTNHLEIDVCRFEPSGQCFQLASIART IEGLNVKQLVIDANCSDAHFRAILQTIYLDDVALFRNPYPSRELFHKVLIQNVEKVIY KNDKSLTLDDLLVMNFKILDYKTARGNHLTSIRFFNKFIKMWRTGYNTKLKIIRIIFD EAVNKETVLNGIKYSEVDPEAEINSNRPLCKDAELAKSMDIYDINGARGAKATVYINK FNESSGWIEVAVWD" gene <980861..>982541 /locus_tag="CAEBREN_23250" /db_xref="WormBase:WBGene00161975" mRNA join(<980861..980949,981659..>982541) /locus_tag="CAEBREN_23250" /product="hypothetical protein" /db_xref="WormBase:CBN23250" /db_xref="WormBase:WBGene00161975" CDS join(980861..980949,981659..982541) /locus_tag="CAEBREN_23250" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001810 (F-box domain, cyclin-like), IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45592.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="WormBase:CBN23250" /db_xref="WormBase:WBGene00161975" /translation="MAVVAPGFPLLRLPTKARNHAVKTMDILDRISLSLVSKVTKSIV IRCGVNTSFISFTMRELFIVTLTRQNLNLTWCLSQRHKTWDGSNPVELVAANVVQVRK SRTENYRWKKKGFEIKDWINHFLDITRIRCIHKIFFDERGERFDVDSVARTVNGFNLN ALVVSDECSSKYANSIFQKVHTNSISLDLNLFPQKVILEKVVIQNCKRVYTQTEFPIK LNDLLIMNCGEFVTKDPRGFSMKTFNRFLKIWKTGFNRRLKRFMIEFGGHFAPDKNVI LKGIDHIEVTPARFDFRGANGSRATLLFQHRLSRIMLLVSDGNFIQL" gene complement(<983280..>984445) /locus_tag="CAEBREN_02311" /db_xref="WormBase:WBGene00141036" mRNA complement(join(<983280..983507,983553..983919, 984315..>984445)) /locus_tag="CAEBREN_02311" /product="hypothetical protein" /db_xref="WormBase:CBN02311" /db_xref="WormBase:WBGene00141036" CDS complement(join(983280..983507,983553..983919, 984315..984445)) /locus_tag="CAEBREN_02311" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45843.1" /db_xref="WormBase:CBN02311" /db_xref="WormBase:WBGene00141036" /translation="MSSIPRYTCRDGTQILHSILRSNAVQEFGLYYIKDMMQLQLLSN ESALYVFFFGLFIPLLSIQIYLIQTVNFLNMSVAIIDFKPTVNTGKLRCILMVVGIIL KFLLPEYRLVVEISNNKLYAFLLENVLSVLNLILVFVVTMKKRKINENTLGIIIHSWL STASFLIFQIAHCIFYIERLTKPYNIDIYTFSAYYFVFFWIVSAYITNCKFIRKYIDR ETIENPYVETEMEEVSDTAQQKF" gene <984755..>985682 /locus_tag="CAEBREN_10175" /db_xref="WormBase:WBGene00148900" mRNA join(<984755..984913,984962..985411,985455..>985682) /locus_tag="CAEBREN_10175" /product="hypothetical protein" /db_xref="WormBase:CBN10175" /db_xref="WormBase:WBGene00148900" CDS join(984755..984913,984962..985411,985455..985682) /locus_tag="CAEBREN_10175" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45797.1" /db_xref="WormBase:CBN10175" /db_xref="WormBase:WBGene00148900" /translation="MKVYIEAIGTDEYSFTFYNMYKSFAEAFFGNMYQFIFSFFFFTA YIFKLLKGQGSHFKPFLSFHIIMYCSMICLPALIIQSESVVFALVFYAFVLLVALQIF IIQAINFLNLLVTIIDFKPTVGTKKIRFFLMVIAIILKKSLPEYRLVVEISKDKFYNL FFENLLSVLNLILVFMLIMKKKKINENKLGVIIHSLLSSASLLIFQIVYCTFYMEELK QPHNPDIFVFSAYNFVFFWIVSAYITYSKFLRKYIDRETTENPYVETEMGKIGDTAQP KI" gene <986614..>987017 /locus_tag="CAEBREN_11307" /db_xref="WormBase:WBGene00150032" mRNA join(<986614..986745,986790..>987017) /locus_tag="CAEBREN_11307" /product="hypothetical protein" /db_xref="WormBase:CBN11307" /db_xref="WormBase:WBGene00150032" CDS join(986614..986745,986790..987017) /locus_tag="CAEBREN_11307" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45812.1" /db_xref="WormBase:CBN11307" /db_xref="WormBase:WBGene00150032" /translation="MFIENVLCILNLVLVGVLVMSTDKLDQNKLGAIIHSSLSSASFL LFQLIDGMVLLYINRPQKLYNYGIFIFGGYYFVFFWITSVYITNLKFMRKYIDRGTMR NTYVEMGKVDDSAQPKF" gene complement(<987220..>989188) /locus_tag="CAEBREN_00805" /db_xref="WormBase:WBGene00139530" mRNA complement(join(<987220..987347,988709..988801, 988853..988915,988964..989078,989129..>989188)) /locus_tag="CAEBREN_00805" /product="hypothetical protein" /db_xref="WormBase:CBN00805" /db_xref="WormBase:WBGene00139530" CDS complement(join(987220..987347,988709..988801, 988853..988915,988964..989078,989129..989188)) /locus_tag="CAEBREN_00805" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45580.1" /db_xref="WormBase:CBN00805" /db_xref="WormBase:WBGene00139530" /translation="MKKLSVILLFLCFIIICGTNKDENQDMKPPGIGELTDQTAHLEA LYKNFADEMEKKTQGTRVARDVIDDIISAFPLLNILKTSIIDVFDGAGNLVQQAAKTV TENIPKIAEEVIATVKAVDITGVTSALESLLAKLIPQIVSWLSNTRQMLE" gene <996052..>996258 /locus_tag="CAEBREN_25529" /db_xref="WormBase:WBGene00164254" mRNA <996052..>996258 /locus_tag="CAEBREN_25529" /product="hypothetical protein" /db_xref="WormBase:CBN25529" /db_xref="WormBase:WBGene00164254" CDS 996052..996258 /locus_tag="CAEBREN_25529" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45648.1" /db_xref="WormBase:CBN25529" /db_xref="WormBase:WBGene00164254" /translation="MIRLCMDRSKQSFNFDIFVFSAFYLVFFWIVSVYITHSKFMRKY IDRDSIGNPYLEMEKLDETAQSKF" gene complement(<996718..>999763) /locus_tag="CAEBREN_17161" /db_xref="WormBase:WBGene00155886" mRNA complement(join(<996718..996944,997619..997666, 998139..998283,999198..999271,999319..999390, 999434..999487,999536..999653,999704..>999763)) /locus_tag="CAEBREN_17161" /product="hypothetical protein" /db_xref="WormBase:CBN17161" /db_xref="WormBase:WBGene00155886" CDS complement(join(996718..996944,997619..997666, 998139..998283,999198..999271,999319..999390, 999434..999487,999536..999653,999704..999763)) /locus_tag="CAEBREN_17161" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45558.1" /db_xref="WormBase:CBN17161" /db_xref="WormBase:WBGene00155886" /translation="MKKIFVILLLLCITTICETNKDEKQPSDMKPPGIEDLTDQSAYL EVLKDFSNKMEEETQGIRVARDEPGFFSSLWNTAKTAAVNAFDAAVNALKKDSEKISE AIRQRIENEIENRLTSILDQSPNCTSSEPAIMLTRETLPPFLDGVEQWVQMMNDKIEA GHPLTDEEYCSIGEYLENLGNIKPLDLALEERYLAAMESLAELIKKQKDMKRIPSLLF ELLSDYPIYNAIAGAIVPAVLLVIHVFDFLSLSLPLSQILEFLGIQI" gene <1007697..>1009174 /locus_tag="CAEBREN_17084" /db_xref="WormBase:WBGene00155809" mRNA join(<1007697..1007785,1008292..>1009174) /locus_tag="CAEBREN_17084" /product="hypothetical protein" /db_xref="WormBase:CBN17084" /db_xref="WormBase:WBGene00155809" CDS join(1007697..1007785,1008292..1009174) /locus_tag="CAEBREN_17084" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001810 (F-box domain, cyclin-like), IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45718.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="WormBase:CBN17084" /db_xref="WormBase:WBGene00155809" /translation="MAVVASRFPLLRLPIKALNHAVKTMDILDRISLSLVSKVTKSVV VRCGVSISFIRFYMQEAFFVTLTHQNLDFTWCLSQRHKTWDGSNPVELTAASVVQVAK SRTENYRWKKEGFEIKDWIKHFQDITRIHYIHRIVFGKEGERFDVDSVARTIKPFNVN ALVVSNECSSKYANSIFKKVHTNHISLVRNLFPRKVALGKVLIQNSNTVYTHTNFPIK LNDLLMMNCEVFDMQARRNFSLKIFNRFLKIWRTGFNRRLTRVMIKFSGNFAPDKNVI LKGIDYIEVTPTRFDFRGANGSRATLLFQHRLSRIMLFVSDGNRIQL" gene complement(<1009517..>1010483) /locus_tag="CAEBREN_22340" /db_xref="WormBase:WBGene00161065" mRNA complement(join(<1009517..1009744,1010325..>1010483)) /locus_tag="CAEBREN_22340" /product="hypothetical protein" /db_xref="WormBase:CBN22340" /db_xref="WormBase:WBGene00161065" CDS complement(join(1009517..1009744,1010325..1010483)) /locus_tag="CAEBREN_22340" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45573.1" /db_xref="WormBase:CBN22340" /db_xref="WormBase:WBGene00161065" /translation="MKVYIETIDVGLHSFSFSNMFYTVNDAFFDNLHHSIFSLILFVA YIFKLSKGQIFQIVHCIFHMEKLKKPYNIDIYTFSAYYFVFFWIVSVYITNCKFMRKY IDSDTIENPYVETEMEEVSDTAQQKF" assembly_gap 1013059..1019674 /estimated_length=6616 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1027035..>1028130 /locus_tag="CAEBREN_02105" /db_xref="WormBase:WBGene00140830" mRNA join(<1027035..1027138,1027188..>1028130) /locus_tag="CAEBREN_02105" /product="hypothetical protein" /db_xref="WormBase:CBN02105" /db_xref="WormBase:WBGene00140830" CDS join(1027035..1027138,1027188..1028130) /locus_tag="CAEBREN_02105" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45785.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN02105" /db_xref="WormBase:WBGene00140830" /translation="MMFNDDDAPEATFPLLGLPDQVIRDVIDCMDPREVIGFSLISNK TALLVQSVNNTSLPPDVEVTSTVEVSVQNSYDIHGLYYFRFYDSEQLPFGGTSTQPLK ELYPPGYVRVYWNANELGKFEKKEFTLRNWMDHISKIFNQPKINSLEYKPKVFSAQSV KETFPEFDEFVMLCCAEEYERMMKIFNYSKSIQVVGGRSYLNKESEAIPKVFIQNWER AETEIHLKISLDDLLICNAQSLTISELYVTNKGLNTFLKCWMKGACPNLKHAKLRAFT DKKLDLDIVWKGIKRQNAPENRTNWCRTCKYWDFMAFDGGVNIKRNDGTVATILIEVI HPYEGCFLKMFVQH" gene <1030591..>1031675 /locus_tag="CAEBREN_08634" /db_xref="WormBase:WBGene00147359" mRNA join(<1030591..1030676,1030730..>1031675) /locus_tag="CAEBREN_08634" /product="hypothetical protein" /db_xref="WormBase:CBN08634" /db_xref="WormBase:WBGene00147359" CDS join(1030591..1030676,1030730..1031675) /locus_tag="CAEBREN_08634" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001810 (F-box domain, cyclin-like), IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45762.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="WormBase:CBN08634" /db_xref="WormBase:WBGene00147359" /translation="MADPSFSLLFQLPNDAVKNVVECMDPPDIIGFSLISNKSALIVK SLNCKAEPFRVEVTSKVDVIVSFKMDGYYRFRFYESERLYFGEVSTQPPKDLYPPGYM KLFWSMDEIGTFEKKNFTMRDWMDHICKIFNQPKINSLEYKPKVFSAQSVKETFPKLY QLSIECSNEEYERMMKIFNYSESIRVVRRNINHNNELGIIPKIFIQHFERAETMANLK ISLDNLLICNTQLLTIGELYMTNRGFNTFLKCWMKGACPNLKHVDIRVYTEKALDLDI VWKGIKRQNAPDNRRNTCGTCEHRDFLAFDGGVDIKRYDGTVATIFMQFHQPLRFFGD CDLKMLVQH" gene <1032315..>1033368 /locus_tag="CAEBREN_15333" /db_xref="WormBase:WBGene00154058" mRNA join(<1032315..1032391,1032438..1032724,1032797..>1033368) /locus_tag="CAEBREN_15333" /product="hypothetical protein" /db_xref="WormBase:CBN15333" /db_xref="WormBase:WBGene00154058" CDS join(1032315..1032391,1032438..1032724,1032797..1033368) /locus_tag="CAEBREN_15333" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45607.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN15333" /db_xref="WormBase:WBGene00154058" /translation="MSFPFLLQLPYNSIKNVIKTMDIRDTFGFSLISKKSALLVKAIK LKVKYFTVTVASTLRVEITICEEITLTFHFYETEQIDYDEVPTEPPKDLYPPGYVVLS NWRNYEKREFTMKKWIDHFLKHLFPKVQFLDIHCTRSHYELMRDYFNYSDSINIRRDN MVLEIDLGVIPKILIRNFDLVETWFYLEMSLNELLIGNAQSFIYHEVSLSNKQINMFL KCWMKGACPNLKHTMIRVFSEKPLDLDVVWKGIKNQAAPQDGIGICETCDYFLQFKGG VNIKRFDGVVATVFIEPVDNGSFSVCDLNMFVDHR" gene complement(1035196..1035267) /locus_tag="CAEBREN_26636" /db_xref="WormBase:WBGene00187247" tRNA complement(1035196..1035267) /locus_tag="CAEBREN_26636" /product="tRNA-Thr" /db_xref="WormBase:CBN26636" /db_xref="WormBase:WBGene00187247" gene complement(1038302..1038373) /locus_tag="CAEBREN_27017" /db_xref="WormBase:WBGene00187628" tRNA complement(1038302..1038373) /locus_tag="CAEBREN_27017" /product="tRNA-Thr" /db_xref="WormBase:CBN27017" /db_xref="WormBase:WBGene00187628" gene complement(<1050537..>1051633) /locus_tag="CAEBREN_11127" /db_xref="WormBase:WBGene00149852" mRNA complement(join(<1050537..1050741,1050792..1050922, 1050975..1051320,1051566..>1051633)) /locus_tag="CAEBREN_11127" /product="hypothetical protein" /db_xref="WormBase:CBN11127" /db_xref="WormBase:WBGene00149852" CDS complement(join(1050537..1050741,1050792..1050922, 1050975..1051320,1051566..1051633)) /locus_tag="CAEBREN_11127" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45793.1" /db_xref="WormBase:CBN11127" /db_xref="WormBase:WBGene00149852" /translation="MNQKATMTTLQPPPRHSNNNDTPKILHRIEDIMHSDADTFPEFS NRDGSKESIDSIQNWQLIMIRIPDFPNETHAKTINEAITNEMRVTWKTPPTSFAYVSA PHIPILQLAHGVAKKHFAEKTALRSSFFFSEPKNDKFTIAKDSELKNLKYEVILGAAR FSWSKAETQVEMAKRIESTLFELMRVLPNLVLFLGPIAFDTLFETLEKQKRKSISTTK PGVIVENFKRDNGKWKRIQKHGATSISVLLC" gene complement(<1052323..>1054370) /locus_tag="CAEBREN_24841" /db_xref="WormBase:WBGene00163566" mRNA complement(join(<1052323..1053238,1054066..1054071, 1054297..>1054370)) /locus_tag="CAEBREN_24841" /product="hypothetical protein" /db_xref="WormBase:CBN24841" /db_xref="WormBase:WBGene00163566" CDS complement(join(1052323..1053238,1054066..1054071, 1054297..1054370)) /locus_tag="CAEBREN_24841" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45677.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN24841" /db_xref="WormBase:WBGene00163566" /translation="MPLPLLRLPENLTVDVLRTFEMRELQGIAISILSKRSSKAVQLL KLRSLAVNLHIGSSISFEVTFNDPTQNLFLDFYWNTKRRNTVLNIPKKVTVIYGNEID DWRLSSSKMTMKDWYLHIEKTVDACFSIHFKFGFKIFDFESIKKTFKDVEVNELSIAQ NIPNNQSRMILEEFLPISHDLRLERSPFQRNDGLRAILIQNQECFRYGTYERVSDFTL NDMLICNFTCLSITLPTWTDSDINRFLKLWIKGACRQLCQLLFIHSPEEWRWNQEEVL KEISFQEVEGDRILGMYDGEVQYPINGGCDIRAMDGRICTIEIEEPNFVMFYFYD" gene complement(<1056155..>1057198) /locus_tag="CAEBREN_16263" /db_xref="WormBase:WBGene00154988" mRNA complement(join(<1056155..1057025,1057107..>1057198)) /locus_tag="CAEBREN_16263" /product="hypothetical protein" /db_xref="WormBase:CBN16263" /db_xref="WormBase:WBGene00154988" CDS complement(join(1056155..1057025,1057107..1057198)) /locus_tag="CAEBREN_16263" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45712.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN16263" /db_xref="WormBase:WBGene00154988" /translation="MDSRFPFFRLPLTAVKCSEENVLKNMDIIEKLAFSLLSKRAKLV IRLLKLRPHYVRVNVGGLIGFEINFDDINQTVHLQFCTDTVLDIPKGITVNETESWRL PSSKMTMKDWLRHLRFIFRTTYITCFNFGFSLFDFDSIKKSFAPFEMLFISENVPTNQ SIMLLKELLPRDLVLKPNSFEKHELRSILTQHIECFSYGRHEEPSDFALNDLLMCDAV FLNIIWPLDFTENHMNRFLKLWKKGACPRLCMLEFSWVFVRNPENILKGINFKEVLED RVINWLIHGERMSIKGGYDIGGKDGRKCTVVVPSQFEVSFYFWD" gene <1058088..>1058490 /locus_tag="CAEBREN_04771" /db_xref="WormBase:WBGene00143496" mRNA join(<1058088..1058256,1058375..>1058490) /locus_tag="CAEBREN_04771" /product="hypothetical protein" /db_xref="WormBase:CBN04771" /db_xref="WormBase:WBGene00143496" CDS join(1058088..1058256,1058375..1058490) /locus_tag="CAEBREN_04771" /note="contains similarity to Interpro domain IPR006781 (Apolipoprotein C-I)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45566.1" /db_xref="InterPro:IPR006781" /db_xref="WormBase:CBN04771" /db_xref="WormBase:WBGene00143496" /translation="MKLQFTLPILIILLAIVGHSVAQNDDDDIKTELGKQLREQLDQL LEKMKDAIGRYQIKEIRQKLKDMRQDAIEKIKERIQEQKDKFNGTVEANP" gene <1059873..>1061349 /locus_tag="CAEBREN_22947" /db_xref="WormBase:WBGene00161672" mRNA join(<1059873..1059961,1060446..>1061349) /locus_tag="CAEBREN_22947" /product="hypothetical protein" /db_xref="WormBase:CBN22947" /db_xref="WormBase:WBGene00161672" CDS join(1059873..1059961,1060446..1061349) /locus_tag="CAEBREN_22947" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45705.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN22947" /db_xref="WormBase:WBGene00161672" /translation="MQSVVSSIPVLKLSKNVIQNMLLTCGTREILTFSTLSNRSKSLA ESLNLYAAQIRVYIGHAVKLEVIHSSERVTLTFYNNNEDFKIVLGIPEEITVDFESSE TWRNRGWTINDWSNHLVNVFGWPSLDFVCFEPGFEKYDLESIQKNFRVFRTLTISPRI SNELTVMLLENMLLPAHVLALQKNPYEKRLHLDKIFLQNLTHLSFKSVDNNTEFTLDD VLMSNIQFLFLSAKFLPENDVNKLLKLWRRGMNSKLSYIEFIYPADKIINRAQVLKSI EFTEIPDDVERRIPCFDSEEEVSILGGCDFYGQNGKKGTIIFETNCIMYFLVWE" gene <1061838..>1063155 /locus_tag="CAEBREN_01845" /db_xref="WormBase:WBGene00140570" mRNA join(<1061838..1062052,1062309..>1063155) /locus_tag="CAEBREN_01845" /product="hypothetical protein" /db_xref="WormBase:CBN01845" /db_xref="WormBase:WBGene00140570" CDS join(1061838..1062052,1062309..1063155) /locus_tag="CAEBREN_01845" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45792.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN01845" /db_xref="WormBase:WBGene00140570" /translation="MNHLTPINDAEEQRLNTTSRAVIDLLPAQERSRDHCHLYSSAVM EAAPSFPLYLLPTKVIIRFLRILNFQEIIAIASLSEKSKALCKTSNHKARIQGVSISR FINILVAQGLNLIYFLFYYEPEDTQLAAPIKIYVKSLFGAEIECRSLEINLIFEFLEP RSFRSLLFQQGCEQFDLGVVKQKFKPFERLSISADVHVEYSKRILAEMVKDAKSLLCP GNPFQIPEDFQKFLVQNLQEIEWNFTLDDLLICNSSLIRTNLSEKKMNRFLKLWTNGA NRNLKTMIITAGRASNAHEVLRGLSNRELADGQRRTVERAYPEYNRLSFAGFDIYRVD GTKGTILFDARGMVFYVWE" gene <1068617..>1075556 /locus_tag="CAEBREN_25302" /db_xref="WormBase:WBGene00164027" mRNA join(<1068617..1070508,1070621..>1075556) /locus_tag="CAEBREN_25302" /product="hypothetical protein" /db_xref="WormBase:CBN25302" /db_xref="WormBase:WBGene00164027" CDS join(1068617..1070508,1070621..1075556) /locus_tag="CAEBREN_25302" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000477 (Reverse transcriptase), IPR001584 (Integrase, catalytic core), IPR001969 (Peptidase aspartic, active site), IPR008042 (Retrotransposon, Pao), IPR005312 (Protein of unknown function DUF1759)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45668.1" /db_xref="InterPro:IPR000477" /db_xref="InterPro:IPR001584" /db_xref="InterPro:IPR001969" /db_xref="InterPro:IPR005312" /db_xref="InterPro:IPR008042" /db_xref="WormBase:CBN25302" /db_xref="WormBase:WBGene00164027" /translation="MATAAAKTPIRSQPRRSTSAGSSPTPKRSSGPPLGGTPQFNRDN SNPMAPAKSVGGFGGFQFPQPDGLAPPPSAGGQLPPSESSGGGRPGAGGKRARSSDAL GHVRAGGQLPPNNSSGGGRPGSDGGRRQSVILLDPPANTNNLKTDQQDVKELIFQIHE DMSARMLEIEEQQSMMLNNNMQTEKRSQEVLAQILDQIQLSNTKKQSSESNQERGTKD NAWTRNNSGSTHNNNARNSGNASHGAFEFNDQRGSAENARTENNSGSRQSQDARNSGN TANGGYHSMPEGMYKEPQRPQYYPPRPKVAPESMAGILQVLKPFNGEHADFKTFILQF DHFVHANDDIPVVSKLGILTSLLTGKIKDELAPMGMSEGDYYILRQNLMRQFNNLDYE ACRLHDALDAIEFSKSDWKEMESVLNTYCSIIAKLRGLGRHIDDDSYIRSFLAKIPRV IYPRVFKKYYGKSATFQQVSMAAFNAIAELRCSQNLRKDDVGVSKPNEIFVNVTETQN SKSGQQRWNQRAHQYQDKSGGRSKFTAPSKIRPCAYCDSHSHSAFECTIPIAKKLEQV SAKRLCKNCLSDKHLANNCRSKFTCFHCKEKHFTGHCDKKDVHPMRVNTFEVDFYEDN DTELETHISQHHPQNLIHETFVLAGKGEQERILADSYKPPEEPELIELYSITDVESQL PFIQLTTPAGEALIALVDSGAQYSVISEQAAQRLKLKKIGEKWSSFAGFVSSTQQKFI PYYRLEIQDKDGKAWAMQVPSFDQMRTIFREPAFTDEDLEFLKSEGLLIAEITELKEF GGKTIDLLLGNNVLNKVKKLKKIKSYDLPSGRTIEEMLIGYVNYPPALDNQFVPASEN LQVNLIEAPEMQFIHTLDSEDIFLSTTGTDSQQKMSTQKLTKLLEQSCSLSILGIEKP EEVKKKDQINADLIKQFKESAVLESDKRIHVKFPMNGREKELKENLPIALSRLRNLYH NQLPTKEAKHQFHKLIMEQLEAGTLEEVTPDMRKDGIISFMPTSVVIKEDSAFTKVRI VNDASAHMKGELSINDCIYAGPSLLNQILGILLRARLGKYLMISDIAKAFHQVKIQKQ YRNMTQILWLRDPDIPPTSANVVPYRSTVLPFGISCSPFLLAITIMQYMDIYPNPLNE IILKNMYVDNVIFVTNEKEELTKFYAQAKELFAKNMFMNLREFLVNSADVMDKIPEKD RAPSLLYKLLGHVWNTITDTIRIKLAKPPEEIPTRKQIASWVASNYDPMGLICPVVIQ LRLLQSAACEDELKWSQHIGEKRYDMLEKAEAMFDDDLFEIPRQIVTNYEFNSVELVM FSDASKHHYGIAAYLRFAYPDGSFQSKLIFAKSRIKPLRSGPELTIPRMELIALELAS NSAVTLAKELHQQLKQVTIFSDSTCTLYWTISKIANNYGSRFVANRVRAIHDNLDTLK KEYNTSATIRYVPTDLNPADIATRGCSVSELKASKLWHQGPDFIHKSEEDWPAKLDGT PADPNEFKEYLIQKGIIPEESDEIKAQRIQINKLTIVEDSKSIVPYERTNSLQKLISI VVRIFEFVHTLKRRLRHKEEKKFESSSLRQYAEAAEQKDEVQKRIIIKKYLIKDHIMD SEVRYGAKLPDDCQPLFQEDGIWKHQRRIDSADDQRITDGMKNPIILIERHPLARLIV IDCHRINKHSGVKDLISEVLREYWMKGLPALARRVRNECFTCRKTHGLPHEYPFTRNL PKERTMLVGPFKNIGIDYFGPLAFKLGQSTGKVWVMLVSCMVTRAIHLEIVPDNSTHG FLQALHRFVSRRGAPEHILSDNAPAFKLGYSMIKKDLITLINTSESLTSFMAQHSITP NLITPFSPWQGGSYERMVALVKNVVFKVLGTTTLPFLELETLLIEVEGILNSRPVTPN KISIDDSPATRPIDFMIPQAKLALPEHCNSIVDIVKNHETEKVTRLLLESTARLKEAL WDEFARTYFTTLKNYNIKKYAHSQLTPKVGQVVLVDTPLLPRYKWPLGVITEVTKKKE GRIQSVLVRCKKRIIEKPVNSLIPLEDPDEDDPVDLPKLERTKRVTYSDPAKDTTASS PSGVITSDTTKDDEAQSSESLQPGQKTPPKRGRPPGSKNKKNKKFELPNQGQTPKRGR PPGSKNKKQKRDQQGEISGAATRSKSVNDQDGVQQSVRATTRSKSVTDQDVDRRQKRA TTRRKSDNDQDDDSQSVGATTRSKSKVSQRPGSTDVSQRPGASTASQRPGGLSEDGAR RQQPPRAAKVCNTAHCVVDGVANLISP" gene <1076546..>1078088 /locus_tag="CAEBREN_32759" /db_xref="WormBase:WBGene00194954" mRNA join(<1076546..1076631,1077215..>1078088) /locus_tag="CAEBREN_32759" /product="hypothetical protein" /db_xref="WormBase:CBN32759" /db_xref="WormBase:WBGene00194954" CDS join(1076546..1076631,1077215..1078088) /locus_tag="CAEBREN_32759" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45694.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN32759" /db_xref="WormBase:WBGene00194954" /translation="MAAAPSFPLYRLPAKVIVHLIRILKFQEMIAIASLSQKSKSLCK AANHKARIARVSICRFIHILVARDFDTDRFYFRFHYGPEDTQLATPTYIRVGSMRQGK TMECRSLEIDLIFEFFERRSFRSLVFRQGCEQLDLGVVKQKLRPFERLEISHEVNNEY SKKILTEMVKDANTLLCSINPYRNPEDFQKFLVQNLQEFEWNFTLDDLLICNSSMVYN NLLIRTNLSEKKINRFLKLWRNGANRNLKTMILAVEENSNVLEILRGLSYREFPNGQK RIVERAYPDENREIFGGFEICRVDGTKGTIFFDARGMVFYVWS" gene complement(<1081728..>1084057) /locus_tag="CAEBREN_00914" /db_xref="WormBase:WBGene00139639" mRNA complement(join(<1081728..1081782,1081831..1081928, 1082008..1082159,1082443..1083088,1083330..1083785, 1083956..>1084057)) /locus_tag="CAEBREN_00914" /product="hypothetical protein" /db_xref="WormBase:CBN00914" /db_xref="WormBase:WBGene00139639" CDS complement(join(1081728..1081782,1081831..1081928, 1082008..1082159,1082443..1083088,1083330..1083785, 1083956..1084057)) /locus_tag="CAEBREN_00914" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000340 (Dual specificity phosphatase, catalytic domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45754.1" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000340" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR016130" /db_xref="WormBase:CBN00914" /db_xref="WormBase:WBGene00139639" /translation="MSNNWINPLIGICNTSVLVASGYVIWTCAAKKDKNTSIRSAESP KRPPPKKSIIPTGPSPVKEKNSSSSDEKNTDSAKEKNKKSKENEEGKKEKEKKKSKIL GVKEQTDTGSKSKEEDKKEKKKESSKSRKSRKSLKKLLEKSKKSKTVEKKKEKSESDE NPEDNEKPPEPGSDPRKIWAFKAAKMKCQAICKLHQDKIKGYMPPNCTYTAYDANPDL SRYTDVRCIEETRVILKNHERDFIHASWMRMPGKDDMSYITTQGPLPETLVDFWHMIY QEKISYVLMLCTLFEGGVEKCTLYYPEKLAEVVRFGRYEITLTECKEEAIANTTWNAL TVVDTADPSSEPLYMNHVQVPWWPDQLAPEDARPMIELYKWVKSVNPKGIPICVHCSA GVGRTATFVGIDYATRRIMENPNIEMVDIVREMRAMRFQAVQSHMQFLFLYVALMQYF IDEGVVEMTGRIEAFMTQYKKHAQRKLAKRAVQNQQGEKAAADEKEKEKEKA" gene 1082274..1082346 /locus_tag="CAEBREN_27062" /db_xref="WormBase:WBGene00187673" tRNA 1082274..1082346 /locus_tag="CAEBREN_27062" /product="tRNA-Val" /db_xref="WormBase:CBN27062" /db_xref="WormBase:WBGene00187673" gene 1083211..1083283 /locus_tag="CAEBREN_27709" /db_xref="WormBase:WBGene00188320" tRNA 1083211..1083283 /locus_tag="CAEBREN_27709" /product="tRNA-Val" /db_xref="WormBase:CBN27709" /db_xref="WormBase:WBGene00188320" gene <1085539..>1086222 /locus_tag="CAEBREN_03912" /db_xref="WormBase:WBGene00142637" mRNA join(<1085539..1085616,1086145..>1086222) /locus_tag="CAEBREN_03912" /product="hypothetical protein" /db_xref="WormBase:CBN03912" /db_xref="WormBase:WBGene00142637" CDS join(1085539..1085616,1086145..1086222) /locus_tag="CAEBREN_03912" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45809.1" /db_xref="WormBase:CBN03912" /db_xref="WormBase:WBGene00142637" /translation="MYAEQQYNFSKSRQDQLKKASIDKLNSGDQLHPKDSLNTAPPKD YPFKSKK" gene complement(<1087084..>1092482) /locus_tag="CAEBREN_10062" /db_xref="WormBase:WBGene00148787" mRNA complement(join(<1087084..1087251,1087579..1087707, 1090259..1090387,1090498..1090683,1090730..1091061, 1091346..1091680,1091727..1091845,1091904..1092188, 1092372..>1092482)) /locus_tag="CAEBREN_10062" /product="hypothetical protein" /db_xref="WormBase:CBN10062" /db_xref="WormBase:WBGene00148787" CDS complement(join(1087084..1087251,1087579..1087707, 1090259..1090387,1090498..1090683,1090730..1091061, 1091346..1091680,1091727..1091845,1091904..1092188, 1092372..1092482)) /locus_tag="CAEBREN_10062" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000772 (Ricin B lectin), IPR001173 (Glycosyl transferase, family 2), IPR020550 (Inositol monophosphatase, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45788.1" /db_xref="InterPro:IPR000772" /db_xref="InterPro:IPR001173" /db_xref="InterPro:IPR020550" /db_xref="WormBase:CBN10062" /db_xref="WormBase:WBGene00148787" /translation="MIIFKKKAILKVLLLVPVIWICSLIFFAATSNNNQVGIGTNNDL ADRIAEANFHPKEVPKQRKSDVIQGFGPPIEPEPVAQAAEETNKVEDEPAGGNLAKPK FMVDPNDPIYKKGDTSQAGELGKAVVVDKSKLTSEQKAIYDKGMLNNAFNQYASDMIS VHRTLPTNIDAECKTEKYNENLPRTSVIVCFHNEAWSVLLRTVHSVLERTPDHLLEEI VLVDDFSDMDHTKRPLEEYMSQFGGKVKILRMEKREGLIRARLRGAAIATGEVLTYLD SHCECMEGWIEPLLDRIKRDPTTVVCPVIDVIDDNTFEYHHSKAYFTSVGGFDWGLQF NWHSIPERDRKNRTRAIDPVRSPTMAGGLFSIDKKYFEKLGTYDPGFDIWGGENLELS FKIWMCGGTLEIVPCSHVGHVFRKRSPYKWRTGVNVLKRNSIRLAEVWLDDYKTYYYE RINNQLGDFGDVSARKKLRSDLGCKSFKWYLDNIYPELFVPGESVAKGEYWMLSKDGE IRRDESCVDYAGSDVMVFPCHGMKGNQEWRYNHDTGRLQHAVSQKCLGMTRDGAKLEM VTCQYDDPYQHWKFKEYNEAKAIEHGVKPPS" gene complement(<1102487..>1104810) /locus_tag="CAEBREN_15483" /db_xref="WormBase:WBGene00154208" mRNA complement(join(<1102487..1102649,1102726..1102991, 1103038..1103367,1103584..1104011,1104063..1104572, 1104675..>1104810)) /locus_tag="CAEBREN_15483" /product="hypothetical protein" /db_xref="WormBase:CBN15483" /db_xref="WormBase:WBGene00154208" CDS complement(join(1102487..1102649,1102726..1102991, 1103038..1103367,1103584..1104011,1104063..1104572, 1104675..1104810)) /locus_tag="CAEBREN_15483" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR001450 (4Fe-4S binding domain), IPR017900 (4Fe-4S ferredoxin, iron-sulphur binding, conserved site), IPR013283 (ABC transporter, ABCE), IPR007209 (RNase L inhibitor RLI, possible metal-binding domain), IPR003593 (ATPase, AAA+ type, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45666.1" /db_xref="InterPro:IPR001450" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR007209" /db_xref="InterPro:IPR013283" /db_xref="InterPro:IPR017900" /db_xref="WormBase:CBN15483" /db_xref="WormBase:WBGene00154208" /translation="MSRKGPLVKNNETDVPLRIAIVEKDRCKPKNCGLACKKACPVNR QGKMCIVVEATSTISTISEILCIGCGICVKKCPYDAIKIINLPANLANETTHRYSQNS FKLHRLPTPRCGEVLGLVGTNGIGKSTALKILAGKQKPNLGNFQKEQEWTTIINHFRG SELQNYFTRILEDTLKCVIKPQYVDQIPRAAKGTVELNLKRKHDNENLDKVVDQMELR GLLTRNIEQLSGGELQRFAIAMCCVQKADVYMFDEPSSYLDVKQRLKAAAIIRERVSD TNYVVVVEHDLAVLDYLSDFICCLYGVPGVYGVVTLPSGVREGINMFLDGFIRTENMR FRESKLSFKTSEQQEDIKRTGNIKYPAMSKTLGDFHLNVEAGDFSDSEIIVMLGENGT GKTTMIKMMAGSLKPEDEDTELPRVTISYKPQKISPKSETTVRYMLHERIQNMYEHPQ FKTDVMNPLMMEQLLDRNVKELSGGELQRTALALCLGKTASLYLIDEPSAYLDSEQRL HAAKVIKRFIMHAKKTAFVVEHDFIMATYLADRVIVFEGQPSVDTTACKPQSLLEGMN RFLKMLDITFRRDQETYRPRINKFESVKDVEQKKSGQFFFLDDN" gene <1105592..>1108348 /locus_tag="CAEBREN_25693" /db_xref="WormBase:WBGene00164418" mRNA join(<1105592..1105596,1105647..1105980,1106036..1106136, 1106497..1106683,1106734..1106977,1107137..1107414, 1107514..1107582,1107630..1108004,1108181..>1108348) /locus_tag="CAEBREN_25693" /product="hypothetical protein" /db_xref="WormBase:CBN25693" /db_xref="WormBase:WBGene00164418" CDS join(1105592..1105596,1105647..1105980,1106036..1106136, 1106497..1106683,1106734..1106977,1107137..1107414, 1107514..1107582,1107630..1108004,1108181..1108348) /locus_tag="CAEBREN_25693" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45601.1" /db_xref="WormBase:CBN25693" /db_xref="WormBase:WBGene00164418" /translation="MSTETAEKPEKAPEIGKEAPQKPETTETKANGVKIEKKLEEMSI KAEKSVDPGGSSQNIAENGEAPKKTKLTEEEAIEKIEKQIDEYVKLFEDPAPTFEEKM QQLVRIPKEVEHCLLIRERADRLFKSIPIELFRRIFEQPNEEYLSARPILIHILGFIV QITSAPVHRKFKPLLPLVVDSVSPRGNRMPLSSTIYTDTALMVGMWADETGDGKYIYD TLRHMTSYCAAQKNNLDVGEFLLCIRTLIHKIYQVAAMEDGRFFRIFKNISMSFSAFF EGFFTFSDQFPSSCTTSFDSRGWTVGILAVIRRLLQERQNRFTPDLRRIMWEVISCMT RVGGIGWFNLDKTFAKLAIQMNHVELQMTLQDIDHLDVGQFCLHLRILELYTNAICDS EMFGEEGQEIIPRTVGDSTRFILSFWVEAHVQKIKLPTQLSLSIFHFAIFLFVHEELT LNEDKTRKHFGACILETAFNVLEEAAESDLRGEVGTLFTDMLERLSEFEVLVDTVPVF IMKYLDKIRIAETYEDWKNRVIDCKCCIMDLRGRVDWYSIKTLNEAKEIRDVKGKFTD PELHELSHLFAIFDKLPRVN" gene complement(1109199..1109271) /locus_tag="CAEBREN_27827" /db_xref="WormBase:WBGene00188438" tRNA complement(1109199..1109271) /locus_tag="CAEBREN_27827" /product="tRNA-Val" /db_xref="WormBase:CBN27827" /db_xref="WormBase:WBGene00188438" gene <1111423..>1114180 /gene="Cbn-bre-2" /locus_tag="CAEBREN_06842" /db_xref="WormBase:WBGene00145567" mRNA join(<1111423..1111498,1112038..1112089,1112419..1112537, 1112616..1112777,1112890..1112955,1113002..1113357, 1113418..1113623,1113671..1113797,1113859..1113948, 1114007..>1114180) /gene="Cbn-bre-2" /locus_tag="CAEBREN_06842" /product="CBN-BRE-2 protein" /db_xref="WormBase:WBGene00145567" CDS join(1111423..1111498,1112038..1112089,1112419..1112537, 1112616..1112777,1112890..1112955,1113002..1113357, 1113418..1113623,1113671..1113797,1113859..1113948, 1114007..1114180) /gene="Cbn-bre-2" /locus_tag="CAEBREN_06842" /note="contains similarity to Pfam domain PF01762; contains similarity to Interpro domain IPR002659 (Glycosyl transferase, family 31)" /codon_start=1 /product="CBN-BRE-2 protein" /protein_id="EGT45563.1" /db_xref="InterPro:IPR002659" /db_xref="PFAM:PF01762" /db_xref="WormBase:CBN06842" /db_xref="WormBase:WBGene00145567" /translation="MNTASRNASINSVDQTPHDIVSKYTVIADKPHKFAVYEQLVATP PSMQSRRASSICNRVVVILIILASLFLLCNLFSSSTSEDSEDSSEPSWIIGWATMKPV FKVMGLIVKHDDGPPKDRLPSARPTVMTYKEPEEDYKNSQKFTQVDRACIQDEWEEND SLDNSSTTADTYRISFSDTQKSFKWLHTPPQVPETPEILMIVSSNCDNFARRNIIRKT LMSPEKNQIVGDGRMKFLFLTGVSAGNEKLNAVVLEEAKVFGDMIVVDVEDTYLNLPY KSISLLLYGAYKTPESVKLIGKIDEDVIFYPDQLTPLIHKGTINMSSFAVYGEKWQPG VSVNHGEDGSKWAVSKTSYKCNVYPSYLSGPFYLTTRKAAERIVPATKHRKFISVEDV FITGLLAGDVGVDKVQIPNLFMVHDGTIDSEKFDITAWHTGKNNEQFQESWEKLRLSR CKACSRKAAKNFRGSRSQYGEENGQ" gene <1117747..>1118484 /locus_tag="CAEBREN_31662" /db_xref="WormBase:WBGene00193627" mRNA join(<1117747..1117848,1118020..>1118484) /locus_tag="CAEBREN_31662" /product="hypothetical protein" /db_xref="WormBase:CBN31662" /db_xref="WormBase:WBGene00193627" CDS join(1117747..1117848,1118020..1118484) /locus_tag="CAEBREN_31662" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45625.1" /db_xref="WormBase:CBN31662" /db_xref="WormBase:WBGene00193627" /translation="MSNNWINPLIGICNTSVLVASGYVIWTCAAKKDKNTSIRSAESP KKPPPKKSIMPTGPSPVKEKNSSSSDEKNTDSAKEKNKKSKENEDVKKEKEKKKSKIL GVKEQTDTGSKSKEEDKKEKKKESSKSRKSRKSLKKLLEKSKKSKAVEKKKEKSESDE NPEDNEKPPEPGSDPRKVWAFKAAKMVS" gene complement(1121048..1121120) /locus_tag="CAEBREN_27878" /db_xref="WormBase:WBGene00188489" tRNA complement(1121048..1121120) /locus_tag="CAEBREN_27878" /product="tRNA-Val" /db_xref="WormBase:CBN27878" /db_xref="WormBase:WBGene00188489" gene <1121537..>1122941 /locus_tag="CAEBREN_28520" /db_xref="WormBase:WBGene00190485" mRNA join(<1121537..1122221,1122510..1122661,1122740..1122837, 1122887..>1122941) /locus_tag="CAEBREN_28520" /product="hypothetical protein" /db_xref="WormBase:CBN28520" /db_xref="WormBase:WBGene00190485" CDS join(1121537..1122221,1122510..1122661,1122740..1122837, 1122887..1122941) /locus_tag="CAEBREN_28520" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000340 (Dual specificity phosphatase, catalytic domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45643.1" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000340" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR016130" /db_xref="WormBase:CBN28520" /db_xref="WormBase:WBGene00190485" /translation="MEQRDPNINTLFQKCQAICKLHQDKIKGYMPPNCTYTAYDANPD LSRYTDVRCIEETRVILKNHERDFIHASWMRMPGKDDMSYITTQGPLPETLVDFWHMI YQEKISYVLMLCTLFEGGVEKCTLYYPEKLAEVVKFGRYEITLTECKEEAIANTTWNA LTVVDTADPNSEPLYMNHVQVPWWPDQLAPEDARPMIDLYKWVKSVNPKGIPICVHCS AGVGRTATFVGIDYATRRIMENPNIEMVDIVREMRAMRFQAVQSHMQFLFLYVALMQY FIDDGVVEMTGRIEAFMTQYKKHAQRKLAKRAVQNQQGEKAAADEKEKENVKA" gene complement(1122307..1122379) /locus_tag="CAEBREN_26596" /db_xref="WormBase:WBGene00187207" tRNA complement(1122307..1122379) /locus_tag="CAEBREN_26596" /product="tRNA-Val" /db_xref="WormBase:CBN26596" /db_xref="WormBase:WBGene00187207" assembly_gap 1124529..1124538 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1128912..>1129130 /locus_tag="CAEBREN_19610" /db_xref="WormBase:WBGene00158335" mRNA <1128912..>1129130 /locus_tag="CAEBREN_19610" /product="hypothetical protein" /db_xref="WormBase:CBN19610" /db_xref="WormBase:WBGene00158335" CDS 1128912..1129130 /locus_tag="CAEBREN_19610" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45746.1" /db_xref="WormBase:CBN19610" /db_xref="WormBase:WBGene00158335" /translation="MNFFATVLSFSLLLLLTSMTTAQFFFPFGMGANSNGYNNYNYNG GGTTYGNGYGVKDSEGYFAMCKGWTCQS" gene 1131714..1131786 /locus_tag="CAEBREN_26733" /db_xref="WormBase:WBGene00187344" tRNA 1131714..1131786 /locus_tag="CAEBREN_26733" /product="tRNA-Val" /db_xref="WormBase:CBN26733" /db_xref="WormBase:WBGene00187344" assembly_gap 1136186..1146474 /estimated_length=10289 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1148987..>1151048 /gene="Cbn-cah-1" /locus_tag="CAEBREN_06800" /db_xref="WormBase:WBGene00145525" mRNA join(<1148987..1149241,1149347..1149459,1149695..1149875, 1150533..1150877,1150923..>1151048) /gene="Cbn-cah-1" /locus_tag="CAEBREN_06800" /product="CBN-CAH-1 protein" /db_xref="WormBase:WBGene00145525" CDS join(1148987..1149241,1149347..1149459,1149695..1149875, 1150533..1150877,1150923..1151048) /gene="Cbn-cah-1" /locus_tag="CAEBREN_06800" /note="contains similarity to Pfam domain PF00194; contains similarity to Interpro domain IPR001148 (Carbonic anhydrase, alpha-class, catalytic domain)" /codon_start=1 /product="CBN-CAH-1 protein" /protein_id="EGT45818.1" /db_xref="InterPro:IPR001148" /db_xref="PFAM:PF00194" /db_xref="WormBase:CBN06800" /db_xref="WormBase:WBGene00145525" /translation="MRFECSLFPLFLISPFILLLSITTASQNYQWSYDSDVFGGPDFW GLVEKDWWMCKKGRLQSPIDIQPDRLLFDASVKPVRLDKLPVLSEFVNTGQMVRIRIG YSTKKPSVNITSGPLYGYRYRVQRIDFHMGRGKENGSEHTINGRRFPMEVQLVAFNTD LYPNFTAASKSPHGIAILSVLVDFGSQTNQELTKLTIATASISYKDQRVQMADFEPWR LLPFTRDIITYEGSLTSPGCHETVTWIIMNQPIFITREHFEEWSHLYLSMEGAEKVPV APNFRKIQETNNRLVRTNIQHKMSYNCNVSVNKIHYRANHLPAAAPPPPKQHSSRRHN NPFVN" gene complement(<1151278..>1152160) /locus_tag="CAEBREN_09745" /db_xref="WormBase:WBGene00148470" mRNA complement(join(<1151278..1151379,1151792..1151943, 1152025..>1152160)) /locus_tag="CAEBREN_09745" /product="hypothetical protein" /db_xref="WormBase:CBN09745" /db_xref="WormBase:WBGene00148470" CDS complement(join(1151278..1151379,1151792..1151943, 1152025..1152160)) /locus_tag="CAEBREN_09745" /note="contains similarity to Interpro domains IPR018507 (Cytochrome c oxidase, subunit VIa, conserved site), IPR001349 (Cytochrome c oxidase, subunit VIa)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45543.1" /db_xref="InterPro:IPR001349" /db_xref="InterPro:IPR018507" /db_xref="WormBase:CBN09745" /db_xref="WormBase:WBGene00148470" /translation="MNRLAQPASRSVVKTFQRNSSGPFYGSHNVDGFKSSYTTPLKAN QNASETWKKIFYIASIPCLALTMYAAFKDHKKHMSHERPEHVEYAFLNVRNKPFPWGD GNHSLFHNKAEQFVPGTGFEAEREKHH" gene complement(<1153173..>1154814) /locus_tag="CAEBREN_00824" /db_xref="WormBase:WBGene00139549" mRNA complement(join(<1153173..1153424,1153479..1153614, 1153770..1153854,1153903..1154122,1154668..>1154814)) /locus_tag="CAEBREN_00824" /product="hypothetical protein" /db_xref="WormBase:CBN00824" /db_xref="WormBase:WBGene00139549" CDS complement(join(1153173..1153424,1153479..1153614, 1153770..1153854,1153903..1154122,1154668..1154814)) /locus_tag="CAEBREN_00824" /note="contains similarity to Interpro domain IPR008271 (Serine/threonine-protein kinase, active site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45683.1" /db_xref="InterPro:IPR008271" /db_xref="WormBase:CBN00824" /db_xref="WormBase:WBGene00139549" /translation="MHEVGFIHRDLKPGNICTGNPPSDDHILYVLDFGISRRIFKKKD SRELRNKRDRVPFYGTRKFCNRACHLEQDQGRKDDMETYVYTVLDLFHNERGLPWSKD LMEPKKIVAKKKALCANPVKELDPMIPPPFAKIITYLNNLKFPDAVDYRFIEMELRSA RKDVTTSDPSDESMDWTGKLEALLEKAKKNKKAETPKGEETIEFERLKLIAAKRTADR SNGKSANESSMMRTLTRDGEGSEGPPTGFNERALTTIGGGTVGAPKKDPLKVEKKRSR SRN" gene complement(<1156182..>1160119) /locus_tag="CAEBREN_10465" /db_xref="WormBase:WBGene00149190" mRNA complement(join(<1156182..1156270,1156391..1156757, 1157066..1157723,1157870..1158195,1160018..>1160119)) /locus_tag="CAEBREN_10465" /product="hypothetical protein" /db_xref="WormBase:CBN10465" /db_xref="WormBase:WBGene00149190" CDS complement(join(1156182..1156270,1156391..1156757, 1157066..1157723,1157870..1158195,1160018..1160119)) /locus_tag="CAEBREN_10465" /note="contains similarity to Pfam domain PF00171; contains similarity to Interpro domains IPR016163 (Aldehyde dehydrogenase, C-terminal), IPR016162 (Aldehyde dehydrogenase, N-terminal), IPR015590 (Aldehyde dehydrogenase domain), IPR016160 (Aldehyde dehydrogenase, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45752.1" /db_xref="InterPro:IPR015590" /db_xref="InterPro:IPR016160" /db_xref="InterPro:IPR016162" /db_xref="InterPro:IPR016163" /db_xref="PFAM:PF00171" /db_xref="WormBase:CBN10465" /db_xref="WormBase:WBGene00149190" /translation="MLRSVLNAAAAQARSASSASVPPGLANMKPQYTGIFINNEFVAA KSGKTFDTINPANGKVLAQVAEGDKADVDLAVKAAQKAFQTGSVWRRMDASQRGVLLN RLADLIERDRVILASLESLDNGKPYAVAYAADLALTIKTLRYYAGWADKNHGKTIPIE GDYFTYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALAMGNTVVMKVAEQTPLSALHVA ALSKEAGFPDGVINIIPGYGHTAGQAISSHMDVDKVAFTGSTEVGRLVMKAAAESNVK KVTLELGGKSPNIIFADANLDEAVHQANHGLFFNQGQCCCAGSRTFVEGKVYDEFVAR SKALAEKAVIGDPFDLKTTQGPQVDGNQVNTILKYIEAGKKDGAQLVCGGVKHGDQGH FVKPTIFAGVKDQMTIAQEEIFGPVMSIIRFDSMEELVEKANNTIYGLAAGVMTKDLD KALHIANTTRAGSVWVNCYDVFDAAAPFGGYKQSGIGRELGEYGLEAYTEVKTVTIKV PQKNS" gene complement(<1163100..>1164826) /locus_tag="CAEBREN_31719" /db_xref="WormBase:WBGene00193684" mRNA complement(join(<1163100..1163292,1163663..1163879, 1164064..1164262,1164315..1164459,1164759..>1164826)) /locus_tag="CAEBREN_31719" /product="hypothetical protein" /db_xref="WormBase:CBN31719" /db_xref="WormBase:WBGene00193684" CDS complement(join(1163100..1163292,1163663..1163879, 1164064..1164262,1164315..1164459,1164759..1164826)) /locus_tag="CAEBREN_31719" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45628.1" /db_xref="WormBase:CBN31719" /db_xref="WormBase:WBGene00193684" /translation="MNRPNSFLSLFLVKNDAFERDFRTPLRGAPQNPQPGPSSSSTGS PAGKTFQGWRNQGMSSSQRLPPQGFASHTRYPMQSNRPNPPPPKQIPLERVQEHREPS DHQEDREMVPPRYHQGAPPEPQRRGVPYYRAAYRRADLPSMQQPNRHPSPRTPSTSTS SSQLLAPPQSPQGSPFRPQSRLPMAPHRAIAAGINPADVGTMPQRPPAYRTPQQPAPR NYSPPRLPQQFHQILSTATRGASRLAGTGHSVQSGSQNPQPPLSPEVDKDFETKN" gene <1173397..>1174365 /locus_tag="CAEBREN_02602" /db_xref="WormBase:WBGene00141327" mRNA <1173397..>1174365 /locus_tag="CAEBREN_02602" /product="hypothetical protein" /db_xref="WormBase:CBN02602" /db_xref="WormBase:WBGene00141327" CDS 1173397..1174365 /locus_tag="CAEBREN_02602" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45667.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN02602" /db_xref="WormBase:WBGene00141327" /translation="MLLSMLSKRTMNLVKWLKLELKHFTVDLQERVCLHLEFKDYDII EIDLDTNGNSDDFGMLTSDVIVVRLIAEGEVEDDIHVDWEYPNMRDWIDHLQYIFSYN YVDLSFFELRTLCYSFESIVKTLEGTPIRILQAADKYDVFRRVLHYFPTPRLLNLLGR VLPVSHPAPCSKFMAKLLIQNFNALYFYSSIPITLNSLLIMNAPFLRACAPTLSDREL NMYVRLWMNNTASKLEYLDLDYDSFDPDEHRPFRIFDKDVILKGINYIERPIDLKRVF QFSIDFHSFGLCVGLYGGYDVTRQDGTTCSVFIRTERPLIKLVVWP" gene complement(<1182683..>1183371) /locus_tag="CAEBREN_25558" /db_xref="WormBase:WBGene00164283" mRNA complement(join(<1182683..1183197,1183245..>1183371)) /locus_tag="CAEBREN_25558" /product="hypothetical protein" /db_xref="WormBase:CBN25558" /db_xref="WormBase:WBGene00164283" CDS complement(join(1182683..1183197,1183245..1183371)) /locus_tag="CAEBREN_25558" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45780.1" /db_xref="WormBase:CBN25558" /db_xref="WormBase:WBGene00164283" /translation="MFFQGSIQLSILIIQYIIITFGKIIALLLGVILIFLRYLWENEV IILSVFNKEIRLDLIEISFFTCTVTCALIYFLSLKIGKKAKVDRKTISVFVHFIVFVW FYTVCLMAVFTNKNKFKAFLISTTFKLWLFNFTFWFSPEVDMFISDIYYFPFLWIISA HICGSKRIQKLIRDSEKSESQAFQMAQIPVTKKVDNEKTTISYLSLADISIVV" gene complement(<1185810..>1186970) /locus_tag="CAEBREN_08499" /db_xref="WormBase:WBGene00147224" mRNA complement(join(<1185810..1186002,1186047..1186503, 1186826..>1186970)) /locus_tag="CAEBREN_08499" /product="hypothetical protein" /db_xref="WormBase:CBN08499" /db_xref="WormBase:WBGene00147224" CDS complement(join(1185810..1186002,1186047..1186503, 1186826..1186970)) /locus_tag="CAEBREN_08499" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45547.1" /db_xref="WormBase:CBN08499" /db_xref="WormBase:WBGene00147224" /translation="MKRSSKKSKKSGKKLARSLSSAKKKEVAGKTGSKSTKSVKSAKK SSKDKPTPVPPQSAQKAVDKSKKADSKQQQVPPPQVPPSKAAPLRSASSEPAAPPPQS LPTSTTLATSTTPLTTSSVTTDAMVTAPLAPPTASAATPTLAPPAAGDPKSFSQEAAA FPSPPAKEAEKKKEEGAPEDDEVGHRSKSFVYPSHKFFMTQFVRDECRVRRWVYEDSI PLSMESNMKHMLKVASSRMAACQNDKERRCEMLKELNKLSQILDDI" assembly_gap 1187981..1187990 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1194341..>1195394 /locus_tag="CAEBREN_04505" /db_xref="WormBase:WBGene00143230" mRNA join(<1194341..1194430,1195119..>1195394) /locus_tag="CAEBREN_04505" /product="hypothetical protein" /db_xref="WormBase:CBN04505" /db_xref="WormBase:WBGene00143230" CDS join(1194341..1194430,1195119..1195394) /locus_tag="CAEBREN_04505" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45578.1" /db_xref="WormBase:CBN04505" /db_xref="WormBase:WBGene00143230" /translation="MNPKIIFLLVFISLVTIAETENDGKYPANCGISCAYVEPFKKLK ADAEKRLKENQGPFGAVLQAFLGGLDTIITTVTGLLDTVIIMLIGRPAHNTESFWEEY FAFLYWEDFYNRLNATING" gene complement(<1196496..>1197761) /locus_tag="CAEBREN_00360" /db_xref="WormBase:WBGene00139085" mRNA complement(join(<1196496..1196688,1196735..1197194, 1197373..1197694,1197741..>1197761)) /locus_tag="CAEBREN_00360" /product="hypothetical protein" /db_xref="WormBase:CBN00360" /db_xref="WormBase:WBGene00139085" CDS complement(join(1196496..1196688,1196735..1197194, 1197373..1197694,1197741..1197761)) /locus_tag="CAEBREN_00360" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45575.1" /db_xref="WormBase:CBN00360" /db_xref="WormBase:WBGene00139085" /translation="MTTALAKKKTASPKTPAKSPKSTKSTKSTEAVTKTKSQPRKLRK HRSPVKKEKSKKGFFSCCAKKRKMKRSSKKSKKSGKKLARSPSAKKKEVAGKTGSKST KSVKSAKKSSKDKPTPVPPQSAQKAVDKSKKAESKQQQVPPPPAPSSKAAPLRSASSE PAAPPPQSLPTSTTLATSTTPLTTSSVTTDAMVTAPLAPPTASAATPTLAPPAAAGDP KSYSQEAAAFPSPPAKEAEKKKEESAPEDDEVGHRSKSFVYPSHKFFMTQFVRDECRV RRWVYEDSIPLSMESNMKHMLKVASSRMAACQNDKERRCEMLKELNELSQILDDI" gene complement(<1199139..>1201325) /locus_tag="CAEBREN_04949" /db_xref="WormBase:WBGene00143674" mRNA complement(join(<1199139..1199273,1199922..1200828, 1201246..>1201325)) /locus_tag="CAEBREN_04949" /product="hypothetical protein" /db_xref="WormBase:CBN04949" /db_xref="WormBase:WBGene00143674" CDS complement(join(1199139..1199273,1199922..1200828, 1201246..1201325)) /locus_tag="CAEBREN_04949" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001810 (F-box domain, cyclin-like), IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45758.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="WormBase:CBN04949" /db_xref="WormBase:WBGene00143674" /translation="MTNSIPLLQLPNDERLQVLRCMDRMSLLFFSLISRNTKDLVRSL RVKPITHHRFFSSNLPPVQIGFSDTIGLSMRCWDITVSFYKEQQDNMKVLEKPNKVWI KVKESDGLNTRYTEIEFLSPMEIKEWYEHILYIINESRQATQMILYQESDRFDMEIAK TVFGKINYLTCFFSRPNNHGRNVLRIFGPELKQLTLTFNPYPRGDTRLRKMLIQNLDI LDLGGHNSFKRLNLRDLLICNAHRITFSLNGKFDKINQFLKLWIKGANARLQKLAIEQ RTNFNEEEILKGIRIIREIPQEENIVYGEKFDYRFAYRTRAVDIERYDGTRGTTSPLS ALAEHQGPCQITQTQTYPSLFRGWSYANFAGYITFPSVF" gene complement(<1201665..>1204790) /locus_tag="CAEBREN_09050" /db_xref="WormBase:WBGene00147775" mRNA complement(join(<1201665..1202586,1203340..1204152, 1204711..>1204790)) /locus_tag="CAEBREN_09050" /product="hypothetical protein" /db_xref="WormBase:CBN09050" /db_xref="WormBase:WBGene00147775" CDS complement(join(1201665..1202586,1203340..1204152, 1204711..1204790)) /locus_tag="CAEBREN_09050" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001810 (F-box domain, cyclin-like), IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45685.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="WormBase:CBN09050" /db_xref="WormBase:WBGene00147775" /translation="MANSFSLLRLPNDERLQVLRCMDRMSLLLLSLLSRNTKDLVRSL QLKPSRFYIDFYYSRIGFWMSRPDLYLDFYKEPERKMRMLKKPKKVWISVVKGTIFHD KPIEMELQNPLELKDWLNHIHYIFNSRQVSLINLSEGAERFDLKAIKEKLGNVETLHF NSSMIGFPRTQAGAILENILPVVKQLDLTCNPFRRGELCLQKALIQNTESLQLGFYNG FKRFTLNDLLISNAHNVKLGAHRDFKWINKFLKLWIKGANPRLQTLVISHGARLIPSE IFKGVKVSEEDYDGFPAMDIKRLFLSLTSRKTKDLVKSIKIKPTYFHVTVGEHINLQL YSAELHFYKEPQDNMRTLAKPTKLRVTAWEIIADRHQFNTMELPNSLEIRDWYQHILC ILNLRQAKQIGFYQGWERFDLESIKKCIGKIHTLVYRFVTRHSNSKDILNTFIPDIER VELEWNPYPEGDTGFQKMMIQNFDSLDFGLLHLFEKLNLEDLLISNARYVKLRSIQKF EGTNQFLKLWIKGGNPRLRKFSIGPIFNPQTQLNPEEVLKGIKIAKEHLVGEEIVFEG KTYGISSGSRAVDIKRYDGTRATVLFRVRLFFDFLVWT" gene complement(<1211713..>1215680) /locus_tag="CAEBREN_10329" /db_xref="WormBase:WBGene00149054" mRNA complement(join(<1211713..1212604,1214119..1214502, 1215667..>1215680)) /locus_tag="CAEBREN_10329" /product="hypothetical protein" /db_xref="WormBase:CBN10329" /db_xref="WormBase:WBGene00149054" CDS complement(join(1211713..1212604,1214119..1214502, 1215667..1215680)) /locus_tag="CAEBREN_10329" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45664.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN10329" /db_xref="WormBase:WBGene00149054" /translation="MKKRRLLLSLLSQKSKKLVRFVGIKLLTSHIMVGNYVFFTIPSL CLSMYFYKDPQDNQRVFVKPKYVWISATEGEDDNKKWHEMKLPNHSELKEWIEHILYI FNTKEIFQLCFDPGFETFDLGILKSVVGNLKVFFSLLSRKTKELVKSLSIKRASPEIT IKDNLWLRVRWLYMFFYKQQQNNQRMLGTPNHVWVEEDDTNVAMKLANRLGFKEWIKH ILYIFNVTEFTHLFFHPESRIFDMETLKDAIGNFKEIVLDFRGPEQQKRILNVFLPRA RNLCLTYNPFSQGDLGLRKIVNQNLNILYLGYDNDFERFRFNLNDMLACNASEVILRP IEDYKWINQFFKLWIMGSNPRLQSLEIDNEDFSLTQILKGIKVSRWIPADEDIVHKNE VFSRGLTGRRAVDIYRFDGTRASIGISGGRFWFCVFA" gene <1215871..>1220538 /locus_tag="CAEBREN_06288" /db_xref="WormBase:WBGene00145013" mRNA join(<1215871..1216172,1217792..1218223,1218272..1218781, 1218960..1219216,1219346..1219448,1219618..1220085, 1220325..>1220538) /locus_tag="CAEBREN_06288" /product="hypothetical protein" /db_xref="WormBase:CBN06288" /db_xref="WormBase:WBGene00145013" CDS join(1215871..1216172,1217792..1218223,1218272..1218781, 1218960..1219216,1219346..1219448,1219618..1220085, 1220325..1220538) /locus_tag="CAEBREN_06288" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45661.1" /db_xref="WormBase:CBN06288" /db_xref="WormBase:WBGene00145013" /translation="MILWKCSLSLLLLSIWTVNGSDYEAFMKHIQSQVVPYINKSVDL NSGTTAIVQVFQWHQIPGQMVIEELKWTTKRMEVYMKHRGISQGLAFVIRGQGKDISL HTRDLVTGQSRTYQALAPNYHVAGLLYFTEQYELLNSHTVTLKNGETGEEVKYDTVIS YVQPSDVSFRKMLYSSFASMIDKSIDLYSGKTAIVQVFQWQMFSNRSFVSEELRWHPT RMDVYVRDGSPYQGLAFVIRGQGDNIGFYKKDIATGQVMESHTYAPTYRVASFGYLIP GAAYLNDFKLTLKNGETGEEIAYDTVFHYVELKDQTTTVATTTTTVAPTTTTTLSSEE VSFRKNLMELIDSKVDKSIDLYSGNTSFVNVFHWQTYENQPYFVLEEYKLVKYQRLDV YVKEGCASQGLAFVFRGQGNKFRLGTWNHLTNKPINLPTYLPTYHVASIDYLKHSAYF YNSTENNIYLKNQETEEGDEIWVHFIRPEDQTTTVAPTTTTTLSSEEASFQCKLVKYQ RLDVYVKEGCASQGLAFVFRGQGNNFSLWTRSYLTNEKFIELPTYLPTYHAASIDYMN HSYNSTKFYHLTNEETQKSAQIWVHYIRPEDQTTTIASTDSSSEILGFPLSSIEGMIA PLISKSIDLHSGKTNIRQIMQWDKSEDGTLSFKQIMWQVTEITVFVKRNITDQGLAFV IQGTGDRFSVTLKSEETGAETTREANLLENRVVMIPFGENGQKMIDETLRFTVENLGT GMKHTYQQVIRLARKSFIHSD" assembly_gap 1216597..1217303 /estimated_length=707 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1221060..>1222849) /locus_tag="CAEBREN_19340" /db_xref="WormBase:WBGene00158065" mRNA complement(join(<1221060..1222029,1222758..>1222849)) /locus_tag="CAEBREN_19340" /product="hypothetical protein" /db_xref="WormBase:CBN19340" /db_xref="WormBase:WBGene00158065" CDS complement(join(1221060..1222029,1222758..1222849)) /locus_tag="CAEBREN_19340" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001810 (F-box domain, cyclin-like), IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45720.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR012885" /db_xref="WormBase:CBN19340" /db_xref="WormBase:WBGene00158065" /translation="MTTESPPTFPFLRLPGNAIKHVVRSMEPLHSLNLSLCSKVTKSH VRSSGLKCSKFIMLYEDPFRIEIQFDNIRTLILTSKSNPLNLPPNCHVLRTSGIGMEY DYFDVSYYGGSKPDRNHYRWENKNYESGDWIQHLLFVLNRRHVDIMHFEEGKCCIRAI RASSKGLQVNSMVMQSGTSAEYSQRILFVLKVFNKLFPNNLDVEDYLLEFLPELYIQN FNNLCLSPNFKVTLDEMLMMNTVSLVIKNPKLTMRNLNRFIKLWMANGTNRRLKYLKL SFFSPMLPDHMDLLIMKNIDHRKNLEPGRNFELDLWSGNTKRKIKGGYCVHRKDGTEA TIFMKNERMTTVFKMYVWY" gene complement(<1223168..>1229300) /locus_tag="CAEBREN_04017" /db_xref="WormBase:WBGene00142742" mRNA complement(join(<1223168..1223464,1224192..1224426, 1224561..1224708,1225501..1225618,1225765..1225923, 1229193..>1229300)) /locus_tag="CAEBREN_04017" /product="hypothetical protein" /db_xref="WormBase:CBN04017" /db_xref="WormBase:WBGene00142742" CDS complement(join(1223168..1223464,1224192..1224426, 1224561..1224708,1225501..1225618,1225765..1225923, 1229193..1229300)) /locus_tag="CAEBREN_04017" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45637.1" /db_xref="WormBase:CBN04017" /db_xref="WormBase:WBGene00142742" /translation="MSPEIERRWSIFILDHEESGVSPRRLSEPNPENVYSENRRYFAD QEFRRPRHKPDQNMVEYWVPPEKTPAPKKITNGNGQVQQNGQAKKLNQVGPATTNTPN GKRAMKIPKVKEPRVGGDSSSKKSSADQAPSPFRVMYWKMSQYFEKIGEAVSHQYQKV VMFRNRMKANKVAPIHTKVQSRHLELEPLCCLSSCLVRGGCTTVVVFELCYVVATALC IFEAMFRKKFALWEPLPKSFNGWFAHPLFYYTIAVYDVALFIMAVATARALVNFDKTT LQVHYMFCIFSFLINLSFLIFSIWSLASTGPLTFTPINCLLIFCFLYQLPLNIWGFFV VKSCRDFFALIHVFVSLAEA" gene <1229705..>1231599 /locus_tag="CAEBREN_21814" /db_xref="WormBase:WBGene00160539" mRNA join(<1229705..1229790,1229837..1230034,1230492..1230699, 1231060..1231155,1231216..1231389,1231438..>1231599) /locus_tag="CAEBREN_21814" /product="hypothetical protein" /db_xref="WormBase:CBN21814" /db_xref="WormBase:WBGene00160539" CDS join(1229705..1229790,1229837..1230034,1230492..1230699, 1231060..1231155,1231216..1231389,1231438..1231599) /locus_tag="CAEBREN_21814" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR013785 (Aldolase-type TIM barrel), IPR006062 (Histidine biosynthesis), IPR001269 (tRNA-dihydrouridine synthase), IPR018517 (tRNA-dihydrouridine synthase, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45618.1" /db_xref="InterPro:IPR001269" /db_xref="InterPro:IPR006062" /db_xref="InterPro:IPR013785" /db_xref="InterPro:IPR018517" /db_xref="WormBase:CBN21814" /db_xref="WormBase:WBGene00160539" /translation="MDFEDFSTSKNKNEKKTTFYLAPMVRYSKLAFRQLVRLYDVDVC YTPMIYAKNFIESEKCRNSELSVCEGDRPLIVQFATDDPFVLAEAAEMVYSCSTGVDL NCGCPKHDVRSKGFGSALLSKPELLADMVRQTRARIPDENFSVSLKIRVNHDIEKTVD LCRKAESAGVTHLTVHGRTPSQRAEPIDIKAIRIVKESVSVPVIANGGITSLQEAEFL AEQTGVDGIMAANGLLDNPALFAGHAYTPSDCVQNFMRLSKEHGLDWLLYHQHLQYML RPLLSAQQRRVFNELNGRLAIDQFLNNLLFL" gene complement(<1231825..>1233098) /locus_tag="CAEBREN_02790" /db_xref="WormBase:WBGene00141515" mRNA complement(join(<1231825..1231919,1232030..1232095, 1232146..1232195,1233025..>1233098)) /locus_tag="CAEBREN_02790" /product="hypothetical protein" /db_xref="WormBase:CBN02790" /db_xref="WormBase:WBGene00141515" CDS complement(join(1231825..1231919,1232030..1232095, 1232146..1232195,1233025..1233098)) /locus_tag="CAEBREN_02790" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45739.1" /db_xref="WormBase:CBN02790" /db_xref="WormBase:WBGene00141515" /translation="MNTLSVILLLLAMVMVIDSQFQPRTSNRRVIFRPMTRNSGIVGR RGGPVAPAPFRNNGNRQGGRPPGFKPPVGIAKKLNDAVDFRALARVLLKQ" gene complement(<1235721..>1237559) /locus_tag="CAEBREN_18473" /db_xref="WormBase:WBGene00157198" mRNA complement(join(<1235721..1236654,1237543..>1237559)) /locus_tag="CAEBREN_18473" /product="hypothetical protein" /db_xref="WormBase:CBN18473" /db_xref="WormBase:WBGene00157198" CDS complement(join(1235721..1236654,1237543..1237559)) /locus_tag="CAEBREN_18473" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45819.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN18473" /db_xref="WormBase:WBGene00157198" /translation="MEDYSILYFSLLSKNAKKLIKALQLKTRPIFLTIGHTVELFFCS VSIKFYGPNHQIDQESVRMLSKPENVEVLISLDDSVLDHYINLDMQLKDWIEHVLYIY NQWKLYCISFDVGYQRYDLEAIKKAVLSYEEIKIDKALNDASANVILNAYPHADGLDV QRNIFGQNQMKWWNLFIEHFEMLDLNDAAETPFEPMDFNSLLMCNAKHLRVEKCILSE KEVNCFLKLWTKGAHLRMEFLYIGFLRETISMEAIIRGLKCRDVNTTEQFTFKHTTYN ICDATRTVAMFDIFRHDGIKGTIVFRDNAGLVLDFLVYLD" gene complement(<1240097..>1241156) /locus_tag="CAEBREN_16178" /db_xref="WormBase:WBGene00154903" mRNA complement(join(<1240097..1241018,1241071..>1241156)) /locus_tag="CAEBREN_16178" /product="hypothetical protein" /db_xref="WormBase:CBN16178" /db_xref="WormBase:WBGene00154903" CDS complement(join(1240097..1241018,1241071..1241156)) /locus_tag="CAEBREN_16178" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45745.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN16178" /db_xref="WormBase:WBGene00154903" /translation="MTNAHSFPLFKLPKEEQIRVLRNTKSYTNIYLSFLSKRGKALIK SLQLKTDPIFLKIDSTLELIGFFSITFYFSAPDVSARMLSTPKNVKCLVLDDELEYYH YMNLNMELKDWIDHMLFIYNQHKLLFIGFHIGSERFDLEAIKNAMPSFEKIIIAGNLN LTSTNAIINKFPHTDGLCVDIKVFNGPQLNNRKRFMENFGILELTDFSDAFSDPMDLN SLLICNAKDLGIDNSALSEKEVNRFLKLWVKGANSRLEFIYIQFSQFQVSMEAIIKGF NCQNVNTAEQFTFKNQVYNKSESTRTLAMFDIYRHDGIKGTIVFRDVEGLIMDFLVYH K" gene complement(<1242885..>1243054) /locus_tag="CAEBREN_04602" /db_xref="WormBase:WBGene00143327" mRNA complement(join(<1242885..1242925,1242976..>1243054)) /locus_tag="CAEBREN_04602" /product="hypothetical protein" /db_xref="WormBase:CBN04602" /db_xref="WormBase:WBGene00143327" CDS complement(join(1242885..1242925,1242976..1243054)) /locus_tag="CAEBREN_04602" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45569.1" /db_xref="WormBase:CBN04602" /db_xref="WormBase:WBGene00143327" /translation="MHILSLYSNFPKKKQIEFYETCRLIQLFSSLSYLNEPKH" gene <1244119..>1244997 /locus_tag="CAEBREN_17656" /db_xref="WormBase:WBGene00156381" mRNA <1244119..>1244997 /locus_tag="CAEBREN_17656" /product="hypothetical protein" /db_xref="WormBase:CBN17656" /db_xref="WormBase:WBGene00156381" CDS 1244119..1244997 /locus_tag="CAEBREN_17656" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45737.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN17656" /db_xref="WormBase:WBGene00156381" /translation="MKHKSILVVIDMHYIIIRFWPTSWLRFYEHETDEAKRLFGIPTR VLYTESTGAYNYTGEYIHHRMEMKEWVDHILDIRSRSEVDELTFARGCERYDFERVSN AIPKTRELTIEANIDEALSHRIFNQYSSHIDGLQLDRNIFRGNESKFRKLLIRNLHCL RMGWYLEELQGFGLNELLMCNTSYIKLQNINFSEKLLNRFLKLWVEGANFRMRRLNIY FAQQEVNKELILQGLGCRNIEITEQFTFNDITYTFNARNRLVAFFDFYRKDGVKGRIV FRTERNNEKEIFTLFT" gene <1247738..>1248220 /locus_tag="CAEBREN_05358" /db_xref="WormBase:WBGene00144083" mRNA join(<1247738..1247771,1247817..1247885,1248081..>1248220) /locus_tag="CAEBREN_05358" /product="hypothetical protein" /db_xref="WormBase:CBN05358" /db_xref="WormBase:WBGene00144083" CDS join(1247738..1247771,1247817..1247885,1248081..1248220) /locus_tag="CAEBREN_05358" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45597.1" /db_xref="WormBase:CBN05358" /db_xref="WormBase:WBGene00144083" /translation="MTTSLLSRMQIDRDLRRSTEHVEIVPQETCVHHESPESVLTECA TMSTSTHTPVPPTVTSPTVVSPRRASEIPGTSVANK" gene <1249007..>1251164 /locus_tag="CAEBREN_10672" /db_xref="WormBase:WBGene00149397" mRNA join(<1249007..1249012,1249093..1249378,1249664..1250091, 1250566..1250880,1251150..>1251164) /locus_tag="CAEBREN_10672" /product="hypothetical protein" /db_xref="WormBase:CBN10672" /db_xref="WormBase:WBGene00149397" CDS join(1249007..1249012,1249093..1249378,1249664..1250091, 1250566..1250880,1251150..1251164) /locus_tag="CAEBREN_10672" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45567.1" /db_xref="WormBase:CBN10672" /db_xref="WormBase:WBGene00149397" /translation="MLGLFSRAPGSSRRKPQKAANEAPKKNTSKTKTNTRKKSSRPVK KDGKGRGSSGTQTRSRSNPQTPEKERKRISRATMGHKEKEETAVKDDGGKGSQALQCQ SQLAKPKNIEVKNRAVDEANMVRVFEKYKRGEKERSQAQKSIADLDEKSKILIDRVTK KPSKMKLKGEKSELLIDEISTIYPKAPGKKRIEDSVNFEEDSYSTFPRLVNVRKLPPD DIYTDKGVPTWAEYLNPTEEDMVGIDEPIQIGSEHVELFRNKEIKLITIPPTNLTMDP FQPLPDLMKRDEVHFDNRLVFSNTLRSLINIVPTDNTKMDKKKSSKKSREKTEKKIKF DEVPPLQVMYHQNNC" gene complement(<1251969..>1254634) /locus_tag="CAEBREN_16677" /db_xref="WormBase:WBGene00155402" mRNA complement(join(<1251969..1252232,1252550..1252715, 1252987..1253124,1253335..1253419,1253590..1253689, 1254306..1254425,1254512..>1254634)) /locus_tag="CAEBREN_16677" /product="hypothetical protein" /db_xref="WormBase:CBN16677" /db_xref="WormBase:WBGene00155402" CDS complement(join(1251969..1252232,1252550..1252715, 1252987..1253124,1253335..1253419,1253590..1253689, 1254306..1254425,1254512..1254634)) /locus_tag="CAEBREN_16677" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45791.1" /db_xref="WormBase:CBN16677" /db_xref="WormBase:WBGene00155402" /translation="MTMPPSDTSDYQRFDEMLLHLEPRGCRVPYNVCYDKDWNIWVAS KGGLFKFDGKTLRTLYEDKKFYKKMAPFPQVITYKDKVISTQCDFHMGMTVFKIMTLG GEVVHESYLDGLLLSMTITENGDIYMVKGIDKGAGRNSIWTTHYETPIGWECVMQSDV GQMYTRICTLDEKTLVGAVQDYPANANSKNHMVFIDLETKTVTKKFSQQGVEPGDVHF PKCIRPYGSDGGILVLDKSGRFSEFTKTGEFVAIRAEIDRYLAESFDVKDGEALMALT GCVLDPESHLTTDDWLELIKLDGSTWKAERERKRKEQAEKEGQKEVEEEPLNTEN" gene <1257184..>1257604 /locus_tag="CAEBREN_30904" /db_xref="WormBase:WBGene00192869" mRNA join(<1257184..1257438,1257485..>1257604) /locus_tag="CAEBREN_30904" /product="hypothetical protein" /db_xref="WormBase:CBN30904" /db_xref="WormBase:WBGene00192869" CDS join(1257184..1257438,1257485..1257604) /locus_tag="CAEBREN_30904" /note="contains similarity to Pfam domain PF00595; contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45629.1" /db_xref="InterPro:IPR001478" /db_xref="PFAM:PF00595" /db_xref="WormBase:CBN30904" /db_xref="WormBase:WBGene00192869" /translation="MTAYGHMPGEAIECLSIAVELHKQEVIDAQGQITIRVGFKIGGG IDQDPTKAPFKYPDSGVYITNVEPGSPAEAAGLRKHDKILQVNNADFTMMTHDRAVKF IKQSNVLHMLVARADLPPVSLH" gene complement(<1257883..>1260690) /locus_tag="CAEBREN_15010" /db_xref="WormBase:WBGene00153735" mRNA complement(join(<1257883..1258095,1258636..1258911, 1259005..1259148,1259292..1259508,1259770..1259975, 1260577..>1260690)) /locus_tag="CAEBREN_15010" /product="hypothetical protein" /db_xref="WormBase:CBN15010" /db_xref="WormBase:WBGene00153735" CDS complement(join(1257883..1258095,1258636..1258911, 1259005..1259148,1259292..1259508,1259770..1259975, 1260577..1260690)) /locus_tag="CAEBREN_15010" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45710.1" /db_xref="WormBase:CBN15010" /db_xref="WormBase:WBGene00153735" /translation="MRLQNVEFFLLFLFLFKYSNALRDTCPIGCKCDEDIQQVTCEGQ QVVTLPDRLPSGYEILIIRNSSVRTIEKNSFRKMEKLVQIEFENNPNLGTVEKLAFKG LKKIRLIKFTGCPGLTELQKNAFSGIQNQVGLKIVFEKTPIHRIEGHTFRNAQNIREL TISGEELALSRHCFANINQLDFLTVSGVVLIEPEIFTNSTRFHVVHFKNSQFDIPPQT FSSLSHTSHLLIEHSKVPSIAPDAFSGLTTIQVIELHACQLGTISARAFANVENLGEL KILRNTIGDLDTSESIMSKALKTRMEENTLECNCGMKWMTSVEEMSDINFCSTTASFR SIRSFVKAKCLHNTSQKTQRKSNHLPSISGVSRGFSPSILLISITILLRFRDFRI" gene 1259646..1259718 /locus_tag="CAEBREN_26904" /db_xref="WormBase:WBGene00187515" tRNA 1259646..1259718 /locus_tag="CAEBREN_26904" /product="tRNA-Val" /db_xref="WormBase:CBN26904" /db_xref="WormBase:WBGene00187515" gene complement(<1264453..>1268849) /locus_tag="CAEBREN_05533" /db_xref="WormBase:WBGene00144258" mRNA complement(join(<1264453..1264709,1265439..1265657, 1265836..1266185,1266295..1266392,1266594..1266738, 1268431..1268493,1268620..>1268849)) /locus_tag="CAEBREN_05533" /product="hypothetical protein" /db_xref="WormBase:CBN05533" /db_xref="WormBase:WBGene00144258" CDS complement(join(1264453..1264709,1265439..1265657, 1265836..1266185,1266295..1266392,1266594..1266738, 1268431..1268493,1268620..1268849)) /locus_tag="CAEBREN_05533" /note="contains similarity to Pfam domain PF02008; contains similarity to Interpro domains IPR002857 (Zinc finger, CXXC-type), IPR001525 (C-5 cytosine methyltransferase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45659.1" /db_xref="InterPro:IPR001525" /db_xref="InterPro:IPR002857" /db_xref="PFAM:PF02008" /db_xref="WormBase:CBN05533" /db_xref="WormBase:WBGene00144258" /translation="MNMMHMGGPMNGGGPPPPQPFQMHHPLPHHHHHVAVFASSANGT NGNGGQPQAPPPSALQSATATPPVSTSMNRSQSRASCPQSNREMSSHRSTTSRRCGVC RGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRCLRVLENRLQRDAPTFKARVGCNA CEDCRMQDCQICLVCLDKRFFENRHIPGAMCAKKRCNNAQSIECVPSSLAQSEFIQQR APKRSYEMISPVIQPPQMSHFDVKRVQYMTGPPPPQQQQQMMQMQQPQMQQQQQQQPQ QSQQNQQQVVVVQQQQRPNSNSSLSNGPSPPRTISQQGTPPHQPQQQPQQQPQQNGVH QIKQECIENLEQHQQQQQQQHQQQRMMFAPQPYPDMNGHGRMMAPPLPVVSTPAPMPL PQNQMTNMPQHGLDIPFLIPTYAQTDQFFSKGFPDYEHNGDPFVPPSYAQDMKGQVVL QQL" gene <1294312..>1298264 /locus_tag="CAEBREN_19384" /db_xref="WormBase:WBGene00158109" mRNA join(<1294312..1294382,1294626..1294806,1295061..1295507, 1295632..1295783,1295956..1296558,1297784..>1298264) /locus_tag="CAEBREN_19384" /product="hypothetical protein" /db_xref="WormBase:CBN19384" /db_xref="WormBase:WBGene00158109" CDS join(1294312..1294382,1294626..1294806,1295061..1295507, 1295632..1295783,1295956..1296558,1297784..1298264) /locus_tag="CAEBREN_19384" /note="contains similarity to Pfam domain PF04006; contains similarity to Interpro domain IPR007151 (Mpp10 protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45756.1" /db_xref="InterPro:IPR007151" /db_xref="PFAM:PF04006" /db_xref="WormBase:CBN19384" /db_xref="WormBase:WBGene00158109" /translation="MSTVKAKKDELIPDVGDFSQFFKNRSKLSVSLSDVISDVYEWST SLEPSDDNLPLPFVSKNEEVVWSYLKHQNKQLEGVNRKYKGFLSELIGKPHIRISAKT PQFNDDAEDSEDDPEEDDMDAEDVDDEEEDLDDVDDEEEGDVDLFNLNESDLKNLDAD LKKMAEEEDEEEELDVDGSKKSSGEEPKKFKKSIVDDEFFSLEEMHDFLQKTERGHGK KGGVKEQEEMMFEDEDSWDGKTDYTYEDFFGSRDAVPEAPEATANGKKASEKKRKAGE ADLSVDEGKNKKRVRFAMDEQEEKEEEEDPEDVDDEEFDDEEEEGPVLLGANLQEEKE ESGFEKRQNKMKERIQKLEEENLAPKSWELSGEVAADQRDQNTLLEKHVDFDHGARRA PEVTEEFTDRLEQLIRQRIKDKAWDDPVRVKKVEAKNARFETEAIENQMNQKTSLAEV YEKEFQAAAGGGQNGEKKENPAHEQIKQKMTDLFRLIDALTHFEYKPEEAREEVRVVS NMAALRVEEVGITASTEAQLMAPEEVTKKMKALEKGKEERDATDKARERRQKKAKQRS MLAEFGEEAVFGKQKAARKEKAERGKDKKGEEKVKSSNFFSKLQETVMNEKKEGGAVT KKKKIVKRLKTDKNSAAIKL" gene <1298734..>1303887 /locus_tag="CAEBREN_22018" /db_xref="WormBase:WBGene00160743" mRNA join(<1298734..1298907,1299663..1300085,1300337..1300961, 1301627..1302150,1302356..1302763,1303252..1303651, 1303766..>1303887) /locus_tag="CAEBREN_22018" /product="hypothetical protein" /db_xref="WormBase:CBN22018" /db_xref="WormBase:WBGene00160743" CDS join(1298734..1298907,1299663..1300085,1300337..1300961, 1301627..1302150,1302356..1302763,1303252..1303651, 1303766..1303887) /locus_tag="CAEBREN_22018" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45742.1" /db_xref="WormBase:CBN22018" /db_xref="WormBase:WBGene00160743" /translation="MQNFGGPPQGQMYGGGGGGPGPQQQQMQGGPQVSSVLGVYEGFP RPTGLHGKHIAQYKGWRAQNPQTSGRQQVIRVVKMEPSNPQDMSLYGFNQAQVQTVRP QARPMSRQPQQSPHMQAVGSQALSSQARSPQAFNQPQTMSSQAMNPRPMSRQPQQSPL MQAVSSQAQSSPPVAVDAPQQPQQQKPKMKVPRSREEFESQLHQFQTSKIAVLNQMHA SRQITPEQLQNEIHLLNERINGAYSKYMAQVNVFNTQQQQQAQAQMQAQRGGPGGPGP SPSQQMPPPQMMSVADKKKLAEMQQAKRMHAQQQQQQRGPNQHQFQQPMQQQQQQMQQ QQQQMRMQQQPQYPQGYRQQQPQYPGMQQQQQQQQMQQQGMGMTPQMQQQHMQQQQQH NQQQQIQQQQPQTPQQPHGGPPSVQSGNQHQQQQQFQQQQQYYQQQQNQQQMHLQHQQ MQAQQQAQQAQMAHAQQAQQAQMAQQQAATPAPSQEAPPTPAVPAPPAEKPEDVKYKE LLKEMRAQYYDVITSMHKRQAQQKGLVQMINILEGDRVVPFDQLINLKSSLHRLMIRD VPTFPMLEELRKIYMNTQEEREAHMNKPPLKEEDPGFDELVAGVKKRLHARHEEDEDP MGIQPFHSVRHLKIRVPDFVRKLCGDPTDKEAKEALREEVLGTSSLKRARVEDESEEK DVKKVKTEEKEEEEDTASQHSVDVEEDISNIPQVFVLKTVFDQRKPWIMPPKAREELL KLSNWSIDPHCLPSCSTTPFIIILVRSPSLHVNPLRISLPRSYPSDPCTIQFDRTFPE TSEYGPLLQKLFEKALGNKKSVRNLTDFVEAYQAACEEYQLYLPKYQMAAGETSPSDQ SQSSTQSSAKTPEMGYPRPAAVMNNHPIAHKGIVM" gene complement(<1304367..>1306403) /locus_tag="CAEBREN_18241" /db_xref="WormBase:WBGene00156966" mRNA complement(join(<1304367..1304459,1304812..1305242, 1305357..1305435,1305509..1305632,1305798..1305904, 1306257..>1306403)) /locus_tag="CAEBREN_18241" /product="hypothetical protein" /db_xref="WormBase:CBN18241" /db_xref="WormBase:WBGene00156966" CDS complement(join(1304367..1304459,1304812..1305242, 1305357..1305435,1305509..1305632,1305798..1305904, 1306257..1306403)) /locus_tag="CAEBREN_18241" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003959 (ATPase, AAA-type, core), IPR013748 (Replication factor C), IPR003593 (ATPase, AAA+ type, core), IPR000606 (Helicase domain, viral-like)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45804.1" /db_xref="InterPro:IPR000606" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR003959" /db_xref="InterPro:IPR013748" /db_xref="WormBase:CBN18241" /db_xref="WormBase:WBGene00156966" /translation="MSKATKNELAPWVEKYRPQLLSDIVGNENNVDRLKVIAKEGNLP NVILSGPPGCGKTTSVWAVARELLGDKVKDAVLELNASDERGIDVVRNRIKTFAQTKV TLPEGRHKIIILDEADSMTEGAQQALRRTMELYSKTTRFALACNQSEKVIEPIQSRCC LLRYQKLSPVELLVRVKEIAKAENVNYDDGGLEAILFTAQGDMRQALNNLQATVNAYE LVNKENVLKVCDEPHPDLMVKMLMYCTEKKFFEACKIIHEFYRLGFSADDIISTLFRV VKTIDLSKKVTEALRAEYIREIACCHMRICQGLTSKLQLSRLVAGLCRLS" gene complement(<1306797..>1310365) /locus_tag="CAEBREN_24622" /db_xref="WormBase:WBGene00163347" mRNA complement(join(<1306797..1306919,1307002..1307109, 1307389..1307803,1307878..1307939,1308297..1308653, 1308984..1309517,1310087..>1310365)) /locus_tag="CAEBREN_24622" /product="hypothetical protein" /db_xref="WormBase:CBN24622" /db_xref="WormBase:WBGene00163347" CDS complement(join(1306797..1306919,1307002..1307109, 1307389..1307803,1307878..1307939,1308297..1308653, 1308984..1309517,1310087..1310365)) /locus_tag="CAEBREN_24622" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000772 (Ricin B lectin), IPR001173 (Glycosyl transferase, family 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45560.1" /db_xref="InterPro:IPR000772" /db_xref="InterPro:IPR001173" /db_xref="WormBase:CBN24622" /db_xref="WormBase:WBGene00163347" /translation="MLVFWRRKTLGFICLFSILLTIYLYVSIYPEERSRDIDREEVGR LDGGQVPFREERREVLEESIGGGKNREINDDEGAEKLEKDGEEVMDKKQQNVPPPPPP PENDSGPTTFPDRPKEIEIDTDELGKIHGKLEDAQQADGYKKYQFNGLLSDRIGSRRK IKDSRHAKCSDLQYSPELPAASIVVCYFNESPSVLIRMVNSIFDRTKAEHIHEILLVD DSSEWENATEEAMKYQKKHPVEWEKVKFLKTEKNEGLIRAKIFGAKRADGEVLVFLDS HCEVNEEWLPPLLDQIKQNRRRVVCPIIDIIDAITMKYVESPVCTGGVNWAMTFKWDY PHRSYFEDPMNYVNPLKSPTMAGGLFAIDRDYFFEIGSYDEGMDVWGAENVEISFRIW TCGGELLIMPCSRVGHIFRRQRPYGIKTDSMGKNSVRLARVWLDEYLENFFEARPTYR TFTEYGDLTSRINLRQNLQCKPFKWYLENIYPELLPDNTPNQLDDKILVPGKKYLIKM ANGTHCLSAESSQGHIANGNRVEMRKCNHLERLQQWKYSPTGELRPMGSSRMCLDSLR GISLILCHNQGAHQKWQVSTTGKLYNYSVNKCATGTNETNDLSTLKFCSLSNSFQFVE L" gene <1314475..>1315278 /locus_tag="CAEBREN_00168" /db_xref="WormBase:WBGene00138893" mRNA join(<1314475..1314649,1315190..>1315278) /locus_tag="CAEBREN_00168" /product="hypothetical protein" /db_xref="WormBase:CBN00168" /db_xref="WormBase:WBGene00138893" CDS join(1314475..1314649,1315190..1315278) /locus_tag="CAEBREN_00168" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45849.1" /db_xref="WormBase:CBN00168" /db_xref="WormBase:WBGene00138893" /translation="MLTRVPILLLAVIVVLAVCQEPEKPEKRPALLSRYGRAVLPRYG KRSGNNMMMEQGQGDDSSDVVCQLMDGKYICLPVDAVRFRPFF" gene complement(<1315672..>1322168) /locus_tag="CAEBREN_00167" /db_xref="WormBase:WBGene00138892" mRNA complement(join(<1315672..1315869,1315983..1316281, 1316328..1316615,1316724..1316925,1316994..1317252, 1320328..1320425,1320665..1320898,1320943..1321110, 1321278..1321522,1321604..1321854,1322068..>1322168)) /locus_tag="CAEBREN_00167" /product="hypothetical protein" /db_xref="WormBase:CBN00167" /db_xref="WormBase:WBGene00138892" CDS complement(join(1315672..1315869,1315983..1316281, 1316328..1316615,1316724..1316925,1316994..1317252, 1320328..1320425,1320665..1320898,1320943..1321110, 1321278..1321522,1321604..1321854,1322068..1322168)) /locus_tag="CAEBREN_00167" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR011704 (ATPase, AAA-5), IPR003959 (ATPase, AAA-type, core), IPR011703 (ATPase, AAA-3), IPR004815 (Peptidase S16, ATP-dependent protease La), IPR008269 (Peptidase S16, Lon C-terminal), IPR003111 (Peptidase S16, lon N-terminal), IPR003593 (ATPase, AAA+ type, core), IPR008824 (DNA helicase, Holliday junction RuvB type, N-terminal), IPR001984 (Peptidase S16, Lon protease, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45581.1" /db_xref="InterPro:IPR001984" /db_xref="InterPro:IPR003111" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR003959" /db_xref="InterPro:IPR004815" /db_xref="InterPro:IPR008269" /db_xref="InterPro:IPR008824" /db_xref="InterPro:IPR011703" /db_xref="InterPro:IPR011704" /db_xref="WormBase:CBN00167" /db_xref="WormBase:WBGene00138892" /translation="MKLDEKMELPVIVVASGVLLPGASLKIPIKSKLNIRTIETHLAR GAQSNHYVVIAYKVSTDKIYEIGTIAYIDKLFGMTFNSTTSYSLDVVGLYRANIEKLS IPTCLVTKIEDGKEEASFDHKTIESLISGSKILAQNSNSTNFSQEIHDLIDEHEYGKL ADLCVSQMKNLGFMQVLEFLGTRDVEKRIEMCEKWMNSESNTLRLKMPNSLIPVGQKA QNPAAQKINKRKIPNAKNQVEQLEEKLNKIEFSEDVSDRVFSELHRLKSMNSQQSEYN ILMNWLELVASLPWNTSTVDDIEIGKARNILADSHEAMDDVKQRVLEHLAVCKMNQSV KGMILCFTGPPGIGKTSIAKAIAESMGRKFQRISLGGIRDESDIRGHRRTYVAAMPGR IIEALKHCKTNNPVFLLDEVDKLYSGNQGSPSAALLELLDPEQNSTFHDHYLNIPFDV SKIMFIATANDIDRLEPALRDRLEIIEMSGYSLKEKVKICENHLLSRQLTKHCISPDY VNLDRKAITAMIEEYTMEAGVRQLERQVGAICRHVALRLAEALNSDPGSDVLPDMELP IRISEEDIHRILKIKHMKRVKIVEKMRPLPPGVCFGLSVTTNGGRVMPIEASKSKGTG KIVTTGHLGKVLNESILVAKGWLGANAERFGLKTLEENDIHVHLPAGSINKDGPSAGT GLACALVSLAMGVPLRSDAAVTGEISLTGHVLPIGGVKEKVLAAQREGLRRVVLPRSN EEDYLKIDEDIRQEMDIVLADTVEEVIDAMMEKSGVMAKL" gene complement(<1322716..>1323174) /locus_tag="CAEBREN_20963" /db_xref="WormBase:WBGene00159688" mRNA complement(join(<1322716..1322970,1323139..>1323174)) /locus_tag="CAEBREN_20963" /product="hypothetical protein" /db_xref="WormBase:CBN20963" /db_xref="WormBase:WBGene00159688" CDS complement(join(1322716..1322970,1323139..1323174)) /locus_tag="CAEBREN_20963" /note="contains similarity to Interpro domain IPR002018 (Carboxylesterase, type B)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45844.1" /db_xref="InterPro:IPR002018" /db_xref="WormBase:CBN20963" /db_xref="WormBase:WBGene00159688" /translation="MTGLEISRWGKIVGTSGTKLSVLIPIDDSNGFSNGGCDQSQEKG IISNLVQRQIVVVTLQYRIGALGFFTTYTNSVQSNLGMLDQVQAMKWIKKWI" gene <1323497..>1328655 /locus_tag="CAEBREN_13365" /db_xref="WormBase:WBGene00152090" mRNA join(<1323497..1323677,1324285..1324514,1325313..1325661, 1326055..1327469,1327584..1327731,1328007..1328278, 1328479..>1328655) /locus_tag="CAEBREN_13365" /product="hypothetical protein" /db_xref="WormBase:CBN13365" /db_xref="WormBase:WBGene00152090" CDS join(1323497..1323677,1324285..1324514,1325313..1325661, 1326055..1327469,1327584..1327731,1328007..1328278, 1328479..1328655) /locus_tag="CAEBREN_13365" /note="contains similarity to Pfam domain PF00135; contains similarity to Interpro domains IPR019819 (Carboxylesterase type B, conserved site), IPR002018 (Carboxylesterase, type B)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45806.1" /db_xref="InterPro:IPR002018" /db_xref="InterPro:IPR019819" /db_xref="PFAM:PF00135" /db_xref="WormBase:CBN13365" /db_xref="WormBase:WBGene00152090" /translation="MCRLRSLFLVFSVLIFLNFLVVDAQYQNQNQYQNQNQQQNQNYV TVSCSQGAVQGRTVDLGNDQSQLYSGQAHAFTGIPYCQAPVGNLRFQPPQPMNQFNTT LHDATYFRPKCPQLNAGNNAPTNEDCLYLNIYTPQVGTSGANLSVLVLIDGSNGFSNG GCDQSQEKGIISNLVQRQIVVVTLQYRIGALGFFTTYTNSVQSNLGMLDQVQAMKWIK TEITNFGGNPNSITVAGQDDGACAVSAHCLSPMSQNLFNQAIVQSGSVYSCYNPTPAV PTNPTVQVTTPRPMYDQPNTGYGNANYGYQPQTTTPRSAYNSANSQYDDPSQQLAETL CNISPDQWNNGQTQNIQNCMKNYTVDFFVNQTPGGPNATWMIVRDTSFLPGSIDSLSS RRPNIPIIIGTVQDEDADYAFKLINTGKGGDPGNLDNWIFDFARKNKLNQTQTNQVQD IIDRGYGIPRNAGTVGGQPQYSNQGPGSQNQYSAQNQNQGGQVYSNPGGQNQYSNQNQ NQGGQVYRDPATQNQGSQGGYSNPGYSTPGSQINNQYQGTSGGQQINNQYQYDQPQGS SQTNNQYQGTQYSGGVVAGQQTIYSNPGGQNQYSTQNQNQPGQTRQYDQNGQIVYSNP GSQTNNQNQYSNSGYGNQNQQSTQNQGGTYSNPGYSNQYGNQFQNNGMYTNVTQFSNV NNNYGYQRDQGVQNNRNGNNYPGMVNGNGNGVTDYSQLRTISQIASDQSTSLTTTQIQ SYMQNGARHVRVYQFTHVSEVGRNTVPDTGSNWKPVFKGQDMFFITMSETIWTNSNYT PQDRQVANQMGQRWSDFVKTGQVANWDTTNQQNYNYCNLNTQASQQAQYGQQARRVFQ DQVNPIVQTAQNNYALANNQSVPYPSAQSGSQISRTPGQAQAQYTSGANGSSNFHISF QVNSFPFNG" gene <1345764..>1354425 /locus_tag="CAEBREN_14347" /db_xref="WormBase:WBGene00153072" mRNA join(<1345764..1345951,1346315..1346598,1353134..1353384, 1354327..>1354425) /locus_tag="CAEBREN_14347" /product="hypothetical protein" /db_xref="WormBase:CBN14347" /db_xref="WormBase:WBGene00153072" CDS join(1345764..1345951,1346315..1346598,1353134..1353384, 1354327..1354425) /locus_tag="CAEBREN_14347" /note="contains similarity to Pfam domain PF00046; contains similarity to Interpro domains IPR020479 (Homeobox, region), IPR012287 (Homeodomain-related), IPR017970 (Homeobox, conserved site), IPR001356 (Homeobox)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45740.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR012287" /db_xref="InterPro:IPR017970" /db_xref="InterPro:IPR020479" /db_xref="PFAM:PF00046" /db_xref="WormBase:CBN14347" /db_xref="WormBase:WBGene00153072" /translation="MMRDLSDPMRDLSVSDSRSDSSSSPPILPSSSSSTTSSSAMALH NAQAFWAQNLGEQASFQFGSMMYPNITSQMTCTSNTNNSTGSTTPLHQTSTSTTSSSA SSSNNCNMFDFSTAAAAQQQYLYQAAGYGTWGYPAYNFQYPAIYGGSDGDFKDFKDVT LLPATTRSSSSTTPTATSTSLTSLGWTMTHEGKKKRQPYKKDQISRLEYEYTVNPYLT NKRRAELSNQLMLDEKQVKVWFQNRRMKDKKLKQRVAGPFPLGAPVTPSYERLIN" gene <1355718..>1357551 /gene="Cbn-php-3" /locus_tag="CAEBREN_07280" /db_xref="WormBase:WBGene00146005" mRNA join(<1355718..1356049,1356563..1356783,1357112..1357299, 1357468..>1357551) /gene="Cbn-php-3" /locus_tag="CAEBREN_07280" /product="CBN-PHP-3 protein" /db_xref="WormBase:WBGene00146005" CDS join(1355718..1356049,1356563..1356783,1357112..1357299, 1357468..1357551) /gene="Cbn-php-3" /locus_tag="CAEBREN_07280" /note="contains similarity to Pfam domain PF00046; contains similarity to Interpro domains IPR020479 (Homeobox, region), IPR012287 (Homeodomain-related), IPR017970 (Homeobox, conserved site), IPR001356 (Homeobox)" /codon_start=1 /product="CBN-PHP-3 protein" /protein_id="EGT45680.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR012287" /db_xref="InterPro:IPR017970" /db_xref="InterPro:IPR020479" /db_xref="PFAM:PF00046" /db_xref="WormBase:CBN07280" /db_xref="WormBase:WBGene00146005" /translation="MIAVMQNMMNSQVPQAFIKTSDSPDPSPTSFSTSSIKRSDSPTP TTSSAMPPFWPNVAQLQASGSSGVSSGSSSSASNRQNTSGNTQATADNHSERGSESAS SPQLPLPTSSGMTMPAAAAAGMYPFNTGRFPTANEFGMMVNQSMYNDFYQNSLAASTW GYPYGQQYPFAPNYSMPSLDGNLNDGGQLEWTSSSHSMRKKRKPYTKAQTLELEKEFL YNTYVSKQKRWELAKYLHLTERQVKIWFQNRRMKDKKQKQRSTGDPTGMLMPAGLD" gene <1359104..>1367330 /gene="Cbn-osm-12" /locus_tag="CAEBREN_08169" /db_xref="WormBase:WBGene00146894" mRNA join(<1359104..1359202,1359318..1359380,1359449..1359703, 1360093..1360530,1360603..1360687,1360843..1360933, 1361062..1361173,1361414..1361716,1365310..1365400, 1366049..1366190,1366319..1366428,1366475..1366578, 1367058..>1367330) /gene="Cbn-osm-12" /locus_tag="CAEBREN_08169" /product="CBN-OSM-12 protein" /db_xref="WormBase:WBGene00146894" CDS join(1359104..1359202,1359318..1359380,1359449..1359703, 1360093..1360530,1360603..1360687,1360843..1360933, 1361062..1361173,1361414..1361716,1365310..1365400, 1366049..1366190,1366319..1366428,1366475..1366578, 1367058..1367330) /gene="Cbn-osm-12" /locus_tag="CAEBREN_08169" /codon_start=1 /product="CBN-OSM-12 protein" /protein_id="EGT45572.1" /db_xref="WormBase:CBN08169" /db_xref="WormBase:WBGene00146894" /translation="MQNYTRTDYAQVGTTNRGCMRVIPADKDKDYDLIVVGGQNGSLI CLSRKSNDTTIIFKTQPGPPIQSLALGGPASSKKKDKIFVASQNTVRGVNRKGKTFFS METNMAEVANRMFVRGLDVVLTGRKSYSRYHDTVDSNNYLCTEDIHDVVSLVFEEAWG NREYTSVLACGNSTLQVIEGNKFDYEVRLDSIPFTVALYMGDGGHTKVLVLYGTKTGR LGLASVPQGSGKVLWEISTTSTACVTTIVCYSVTGGQFPDIIVGKEDGLIEIYTIDET DHAQLFGTFPCEESITGISCGNVASKTETDIIVCTFTGWLFSLAKTSRPMIENLPVAA NFNVKMQQLRSEVEELQVKVNEERTRYEQITKTQGGGAGSTFFHSFQVHESFDYSAPH GAYNLTIELVIPIDFVVVQSQLPIRLMEVEKNASVVSEVRQDALNPWPLLASYRCQAN VCRLELRVQANEGDWGIINLYVCPKIMPKCAQITTHFIRALSSHQRTHDFDMYRPLNI LQFTGTFSIAEAHAWLHHLLPNVPSKCPPADTITNNYACAANGGTQLQVVYSKGSAVF RSDCMSTISIIRDKVSEQTMKMQIRVEVACELNHDSIDHCLKLIDPKLSEMLDIEKQK MFASALKELESNNDDVFSFLSPANAKLLRDHDEIYQKSEGINIEESGVLAVFENLALS RAKLTGKSTKGKVEAIRNLVENDYSLENMKALFKKMGNE" gene complement(<1368856..>1369672) /locus_tag="CAEBREN_20741" /db_xref="WormBase:WBGene00159466" mRNA complement(join(<1368856..1369057,1369320..>1369672)) /locus_tag="CAEBREN_20741" /product="hypothetical protein" /db_xref="WormBase:CBN20741" /db_xref="WormBase:WBGene00159466" CDS complement(join(1368856..1369057,1369320..1369672)) /locus_tag="CAEBREN_20741" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45798.1" /db_xref="WormBase:CBN20741" /db_xref="WormBase:WBGene00159466" /translation="MSSSTPTNPAIDFYLSEVDARIAEKQRELEKALEKSQNVRVHAE TIQNFIGKLVLFCYSVEFFQFISIIIDYFDNASRYANFESRVKDFQAEIEEMDRQIQE KQREIDENRNFSRREEVQMAKLMEKLEKVTEERKQKERTLLKLYEEEGKTLEEDEDSD DEDSMSEDQNEACGRAEQQKFDGK" gene complement(<1370694..>1372819) /locus_tag="CAEBREN_25625" /db_xref="WormBase:WBGene00164350" mRNA complement(join(<1370694..1370823,1371718..1371797, 1372697..>1372819)) /locus_tag="CAEBREN_25625" /product="hypothetical protein" /db_xref="WormBase:CBN25625" /db_xref="WormBase:WBGene00164350" CDS complement(join(1370694..1370823,1371718..1371797, 1372697..1372819)) /locus_tag="CAEBREN_25625" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45735.1" /db_xref="WormBase:CBN25625" /db_xref="WormBase:WBGene00164350" /translation="MSLTQSATFCLLAFVALAVMVAVAEGKPQQAVYDIDQAPITAYK RFYSWEDAKRAASSEEGIRNKRKQFYAWAGKRSAAPVHYFEDLQDQELAQPNTMEKRK QFYAWAGK" gene complement(<1374871..>1377593) /locus_tag="CAEBREN_10546" /db_xref="WormBase:WBGene00149271" mRNA complement(join(<1374871..1374993,1375842..1376060, 1376170..1376295,1376402..1376835,1377008..1377190, 1377395..>1377593)) /locus_tag="CAEBREN_10546" /product="hypothetical protein" /db_xref="WormBase:CBN10546" /db_xref="WormBase:WBGene00149271" CDS complement(join(1374871..1374993,1375842..1376060, 1376170..1376295,1376402..1376835,1377008..1377190, 1377395..1377593)) /locus_tag="CAEBREN_10546" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45848.1" /db_xref="WormBase:CBN10546" /db_xref="WormBase:WBGene00149271" /translation="MNSACERDADCDDDLSCTLYFGEMMCRAPIKPLVPLRCESDAEC PSTEYLCVFSTAMQDRVCYKYGDVVTDGYVIPIKHKISMELKTTSTPEPLAPPKEETG LFAESHAIFSPDDDSGSHRLLTSALQKRANEKYNDSPGAGFSAPIYMKMEDPSPAVTA EDRAFQHDGEAVRMTKVVVKEEEGGARIGQGVGLDGQGAGLERLGIGQGVEIEKPGIG QGAELRKPGIGQGAILEGPRQGAELSRPGIGQGAQLVDDEPIDPMATVCQYDYHCRMG ESCSGRVRFVDRNITVCRYDILKKNKQCIYHSDCLSGQRCTAKSKDLATCETDITATI GSIQCFYDYDCSGGEKCTLVDEKERKFVCRPSPTSDPRMNQICTTNAQCPFQQVCRQS AGISLCVDVSISKNPAMLHERLWRFLRNFIFHRRR" gene complement(<1377770..>1378646) /locus_tag="CAEBREN_01012" /db_xref="WormBase:WBGene00139737" mRNA complement(join(<1377770..1378162,1378569..>1378646)) /locus_tag="CAEBREN_01012" /product="hypothetical protein" /db_xref="WormBase:CBN01012" /db_xref="WormBase:WBGene00139737" CDS complement(join(1377770..1378162,1378569..1378646)) /locus_tag="CAEBREN_01012" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45542.1" /db_xref="WormBase:CBN01012" /db_xref="WormBase:WBGene00139737" /translation="MRIPVFLVIAASIITANGYVIGGGTQPGGNQYNPSNNNNGGIGG GVYPGGGGNNGGGGVQRDEGGYCNSNYDCRSGLYCTASVNGVKICLSTSNGGGGSGFP TGSSQCTTSANCQNGGVCVVRNGVGSCQIQAGGYVSPARQGMVRYPSSSGISVG" gene complement(<1379360..>1385747) /locus_tag="CAEBREN_00192" /db_xref="WormBase:WBGene00138917" mRNA complement(join(<1379360..1379468,1379515..1379621, 1380672..1381090,1381237..1381528,1381866..1381935, 1382185..1382528,1383615..1384110,1384171..1384226, 1384422..1384632,1384685..1384792,1384980..1385283, 1385327..1385459,1385508..>1385747)) /locus_tag="CAEBREN_00192" /product="hypothetical protein" /db_xref="WormBase:CBN00192" /db_xref="WormBase:WBGene00138917" CDS complement(join(1379360..1379468,1379515..1379621, 1380672..1381090,1381237..1381528,1381866..1381935, 1382185..1382528,1383615..1384110,1384171..1384226, 1384422..1384632,1384685..1384792,1384980..1385283, 1385327..1385459,1385508..1385747)) /locus_tag="CAEBREN_00192" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR022140 (Kinesin protein 1B), IPR001752 (Kinesin, motor domain), IPR019821 (Kinesin, motor region, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45713.1" /db_xref="InterPro:IPR001752" /db_xref="InterPro:IPR019821" /db_xref="InterPro:IPR022140" /db_xref="WormBase:CBN00192" /db_xref="WormBase:WBGene00138917" /translation="MGKGDSIIVAVRVRPFNDREKTRNCKLVIEMPDEETTVIRDPKT NEEKRFTYDHSYWSHDGFSEKKNGYFEPSDAHYADQKRVFEDLGRGVLANAWAGYNCS LFAYGQTGSGKSYSIVGFKNNKGIVPIVCEELFKQISENKKKNMQFEVFVSMMEIYCE KVRDLLSSTPPPKGGLKVREHPKNGFYVENLTTVPVNSFKEIEAKIEEGTKNRTIAAT QMNATSSRAHTIVKITFNQKSSKQGAGGTSMKKSEINLVDLAGSERQSAAGTEGDRLK EGIVINQSLTTLGRVIKALHDSQKAKGGKKMQIPYRDSVLTCLLKNALGGNSKTIMIA AISPADINFEETLSTLRFADRAKSIKTNAVVNENQTERALRELREENLRLQSQIQGGG VTGDNEEIEKLRRQLAENQKEMEEMEKSWQQKIAEEASKHAGGASEKAEMEAKKKRMC HLWNLNEDPALTNVIVHFIPIGDTVVGNKPTSNGNFIQMSGLSILPQHVILKNDGNNQ ITLSPCSEDLDIFINGKPVHGETQLQQNDRVFFGGNHLYVFNNPTKKGIKTDITYDTA QAEIAQNHAAALGNRGIGGGSKSQFCSFCSLCSLCIIPGDLILEEELMSTLPLVQRAN AMATELGRNVKFEIVLVSPEMRGLTSGLTEIWIKVHNISEDTYFLWEKSRFMNRYYGM QEMYEAKQDGSEDWNLTKERDPFYEPPDSPVFIASSVVFLQSLAYLIDVEEQFPIVDL SGNFGIFRGVSSQEIGLLTVGLSPCSTTGKELRGEYVENPSQLIGKNIAFKVKVISAV GLPRRILKSNCKYRFFGSKKMTTTPTVSGNTPSYGHEETFQFKPVTKEVADYLANSNL YITFWGTQRPRGSASRKNSVSTIGSGGGREGPNRAKRVEKMVQQAKSAENRNISVKAL ETVLRGVDDNETRKARKQSMKKVGAGSSSQVTKSSRSGSKKPRKKEKE" gene 1380545..1380617 /locus_tag="CAEBREN_27700" /db_xref="WormBase:WBGene00188311" tRNA 1380545..1380617 /locus_tag="CAEBREN_27700" /product="tRNA-Asn" /db_xref="WormBase:CBN27700" /db_xref="WormBase:WBGene00188311" gene complement(<1389194..>1396144) /locus_tag="CAEBREN_02811" /db_xref="WormBase:WBGene00141536" mRNA complement(join(<1389194..1389315,1389493..1389603, 1389681..1394295,1394572..1394637,1394686..1394898, 1395249..1395365,1395806..>1396144)) /locus_tag="CAEBREN_02811" /product="hypothetical protein" /db_xref="WormBase:CBN02811" /db_xref="WormBase:WBGene00141536" CDS complement(join(1389194..1389315,1389493..1389603, 1389681..1394295,1394572..1394637,1394686..1394898, 1395249..1395365,1395806..1396144)) /locus_tag="CAEBREN_02811" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45605.1" /db_xref="WormBase:CBN02811" /db_xref="WormBase:WBGene00141536" /translation="MRPLKPKPVGPPHVSFKVFQQLLAEYVKRITALMENYRTCEALV KCRHKEGEEFIPNFNDLHVFLLEEIHRFNQNVDMARKNAKRQTVQFNTTPFYLFEATL EGLVNALREEGERLGVQAAHTYDAWLSIREILLCIKHNTVVDMVSFVVEMAIIHIQFI LDKNKQHIKERQNLMSYHRIERQNEIKLRTQDMCAGALVRKNPEAIKTLKRRELEMLQ KFEDEKFYWQLCKPYEVMMKIYEEKTLKKHPAPQKLTPIQRSFTPAKMPRGCPYPQPP PPPPPQKKTSSRAVKSLAPPPQAVMEIVKMMAPKGSSEAPEVIEKVSEGLGAPEDVEM VSDRSRDLEDVEMASEGSKDPEEAEPGTSMGSGDIPEALEPKQEDVPMEESSDHQSMN PERSRTLEVAKQIPEDVPIDSEESRIPKKEDPESDDVRRSIRTSKAPEDVKATPEEVK VESQTPEDVESDSQNPEYKEQDSEIHRSPEYVEETSEDVETKFDESTDSEDSDEKAEA AEALDNTEDVHEYPESEEPESKYIESSPEVSQDPEGVAKDSDAMEDPEDVRMDSEDVE IGSGDSGVTSENSPPPESGDTDPDEGREDYGTLWDTEDVGVVPEAVRNPEDVKMDSED VKKDSERQEPEEPGSEVPHENVKDSDAFEDQEDAAEDSDDKEELENVEDSEEDSGDSD DDIEDSGAPVDSDDVSDAVEDSEDDKMNPEGAESSSKDSDDEPVGEIKDSDASKGQRD VAETPDARKNSEEVEVASKAVESPEDVEIGSEDSQNSSEDSDDDDSDDNKEDPEAVED SESVVENREQQKSYEPESVVSNENLENSGASGDLEDDPRPEPETDDSDASLEDTEAAD DSEDVRMDPEDVEMGSGDSGVTSENSPPPESGDTDPEEGMEDYGAPNDTEDVEVVPED VNKDPENVEEDPDKSDDSLDGPSSDEPYSDDPNTDVEDSRDSEDVTNAREAFNNPENV AVTPKAVESPEDVKIDPETPQNSKVAPPPEDMAPKQSDSLDSLTDPQEEENDDDEANS DEQRRFWREEAPKAQNPDTQDSLEAPEDMDPESMNPESMNLPPKSPGDDQWLSPHNSP PPNSSEEFQRLEEPPIDDPEEDPDSRTSTPKNGTPVDSEEESDDAFGLEDVGSSQNLD NIPMDSDGGAPESEDVQDRREYTQLEPDSDAPDTDPGSESSGSEDPNLDNIPMDSDGG APESEDVRDRREYTQLEPDSDAPDTDPGSESSGSEDPNKSMDSEPAQVPTNPEDPDDG MDSHETPQDDRPKDPVPHDSSSRSGSKDSNGQEMDAEDTDPVNPGGSESTGSTVPPDQ SGSTSDAPPAPPPNPDPEIPAPGPNANPRIHIGSSGSSGSGSSEDSASSDDVPINIRR PVQRFIGYEDPHHGRRRNSVETESSGSTGSTTPSGSSARSSENSEDIIPVASSGTPSP DVQPTRDVVPQVLEPIEEEPQAPPPPPALQNPEYAALGYDPSTPPTFASSGFDSNPQS PERLAIPVITAKPFQNATPETQNLGSQIPESQNPESSESQASGPSEIQNYPAVDPGAQ VPGPSQFYESQNPGSTGSLAPGSQFYGSPAPGSQFYSDSQNPGPSEPQNPAPPQESQD PFFSTEADIFESSDDSSEALERTETQNYPAVDPESQFLQIPGPSGSQAPPARPDVALD PNFSTEADIFPDSEDSSEASETTETQTYPAVEPGFQVLQIPGPSGSQAPSAPPDVALD PLFSTEADIFPDSEDSSDGEEEERNPQVPDDPPQNSQRIQNFENPLNPNPLEAPPGEE LSLAARNISPTADVFSSSSSSENSDDDDDQKEEKSEAAPTRSTPLKRGRSGDPDGDND DDASGAEPSNPKEPRLEL" gene complement(<1396988..>1398557) /locus_tag="CAEBREN_18088" /db_xref="WormBase:WBGene00156813" mRNA complement(join(<1396988..1397149,1397479..1397751, 1397943..1398081,1398272..1398359,1398404..>1398557)) /locus_tag="CAEBREN_18088" /product="hypothetical protein" /db_xref="WormBase:CBN18088" /db_xref="WormBase:WBGene00156813" CDS complement(join(1396988..1397149,1397479..1397751, 1397943..1398081,1398272..1398359,1398404..1398557)) /locus_tag="CAEBREN_18088" /note="contains similarity to Pfam domain PF03029; contains similarity to Interpro domain IPR004130 (Protein of unknown function, ATP binding)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45790.1" /db_xref="InterPro:IPR004130" /db_xref="PFAM:PF03029" /db_xref="WormBase:CBN18088" /db_xref="WormBase:WBGene00156813" /translation="MKYAQLVMGPAGSGKSTYCSVMHNHCLSTGRTLRMVNLDPACEV FNYPAVVDVRDLISVNDVQEDEELILGPNGALVFCMEYLVQNLEWLHDELDEGEDDYF VIDCPGQIELYSHLPVMRQIVDALKSWDFNVCSVFLIDTNFVLEAEKFISGALTALSA MVAIETPAINVLTKMDLLSERNKQLVDEFLETDTRAIVDQDETVWNSKHRKLTRTIAQ VLEDYSIVKFVPLNCEDEESIDQLLLTIDTTIQYGEDLEVKDNYPEEMDPEQE" gene <1398976..>1400806 /locus_tag="CAEBREN_26068" /db_xref="WormBase:WBGene00164793" mRNA join(<1398976..1399196,1399251..1399581,1399640..1399848, 1400050..1400482,1400603..>1400806) /locus_tag="CAEBREN_26068" /product="hypothetical protein" /db_xref="WormBase:CBN26068" /db_xref="WormBase:WBGene00164793" CDS join(1398976..1399196,1399251..1399581,1399640..1399848, 1400050..1400482,1400603..1400806) /locus_tag="CAEBREN_26068" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR015672 (GPCR 89-related), IPR022535 (Golgi pH regulator)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45845.1" /db_xref="InterPro:IPR015672" /db_xref="InterPro:IPR022535" /db_xref="WormBase:CBN26068" /db_xref="WormBase:WBGene00164793" /translation="MDGLTDVEGKDANVMLGSLILFFATGWLFYTKQLFKNYEVHNRT VQFIFSLTFAFSCSLFELIIFEIADVMAPLSRSRCWTFCLSLILITLVVVIPIYTSFL IVSGLVRRHFQLPLSITLWLVFIWFFWKIGDPFPMLSPKHGIFTIEQVISRVGVVGVT IMAILSGFGAVNAPYCYMTIFTRPVEEFHVCQLEKKLTHTMDLIVLKKRKAARYELEK KRLTGEKPQKEATFFERFWDSFSEKSNGSTLASQIDRLKEEITPLETLARFLFLDLVE LRQMLNRVEFSKTFMGIYFNVLGHFFSIYCIWKIFISFINIVFDRVGKVDPVTKTIEI GVHWMGIPLDISFWSQYISFFLVGVIAVTSVRGLLITMTKFFVSISNATSSLSNIIVL LMAQIMGMYFVSSVLLMRMNVPEEYRQILTRILGDLKFNFYHRWFDVIFLISAVSSIV FLTLIHKSGSSMFRA" gene complement(<1401046..>1402010) /locus_tag="CAEBREN_18154" /db_xref="WormBase:WBGene00156879" mRNA complement(join(<1401046..1401348,1401741..>1402010)) /locus_tag="CAEBREN_18154" /product="hypothetical protein" /db_xref="WormBase:CBN18154" /db_xref="WormBase:WBGene00156879" CDS complement(join(1401046..1401348,1401741..1402010)) /locus_tag="CAEBREN_18154" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45815.1" /db_xref="WormBase:CBN18154" /db_xref="WormBase:WBGene00156879" /translation="MNRIGLVQLSNSARNSPYNVEKTTFDKSSINGSANKSIPEPLKL KRFHHQPSPLSTSITSNKITPVSSPFDVFCEADGESKENVQTQTFEYHSTFTQTTIHV PHIQPTITAEDLTADSPTVNYLRVTADRLQLDFDDEMERNERLVQELCDLDERIGKID DDTEILMEVLADIDEEQDGEQDDEIGTAHV" gene complement(<1402532..>1402941) /locus_tag="CAEBREN_10540" /db_xref="WormBase:WBGene00149265" mRNA complement(join(<1402532..1402672,1402720..>1402941)) /locus_tag="CAEBREN_10540" /product="hypothetical protein" /db_xref="WormBase:CBN10540" /db_xref="WormBase:WBGene00149265" CDS complement(join(1402532..1402672,1402720..1402941)) /locus_tag="CAEBREN_10540" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45654.1" /db_xref="WormBase:CBN10540" /db_xref="WormBase:WBGene00149265" /translation="MSDYVVFEDSNKPSRAEFSCQTEEIALGEVETQTDEETISGYKK SDENPEISYWATIVANRKSEVERIKKINEKMQAEKAEKLARLEEKQAEYQRLFDMGND KLNGSNGEEDSVEEEKSS" gene <1403346..>1410220 /locus_tag="CAEBREN_13751" /db_xref="WormBase:WBGene00152476" mRNA join(<1403346..1403427,1403476..1403582,1403627..1403768, 1404095..1404828,1405168..1405520,1405947..1406146, 1406596..1406619,1407473..1407889,1407938..1408120, 1408558..1408641,1408689..1408766,1408982..1409065, 1409293..1409376,1409865..>1410220) /locus_tag="CAEBREN_13751" /product="hypothetical protein" /db_xref="WormBase:CBN13751" /db_xref="WormBase:WBGene00152476" CDS join(1403346..1403427,1403476..1403582,1403627..1403768, 1404095..1404828,1405168..1405520,1405947..1406146, 1406596..1406619,1407473..1407889,1407938..1408120, 1408558..1408641,1408689..1408766,1408982..1409065, 1409293..1409376,1409865..1410220) /locus_tag="CAEBREN_13751" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45634.1" /db_xref="WormBase:CBN13751" /db_xref="WormBase:WBGene00152476" /translation="MQHTEASRLELDKLLQELKILLRSEKNASDFFKEKKVKEMIDNV LDKMKIEPGLQKNNGIENLFVGESTKTPIKILIDHFLRQYSTLPKSQIHLHYPGMAPD DRFIPRRPFNLPAFYAHYCGENESMVDTMSRIPEAYHPGLDYINQDVDIMIADHGISV AGPLSSPAHKGKCTESFGTNPHARLESQGMTIVKWDRFRKEFEDDFERAEEKILFHGH HFKLKDGLVIDEKEHYFIKCYLNNNEMSDDLTIRKIQFHGSEDVQVLVLFEQWFMAVG RLRKRSGVCKSSGENPFYLDLVEVVGSFGTTDFYTSPGFKTVLRICCYQGDEEEEEER DLKRAKELIAADINQLIDNIEPLYEKMKENENPRIIHPESSDEPGANVLDHYCYPLSL LLLVYQTYQESPNLDDFDFDSPRERLDYAFYILQKNHERSTCREGSSCENLKKFFEVC RGFVLGFEAKAKTSAMDMRMAEQFRQTLSMLYAAFRRPLEFFDQKKLKLIECVLNPPK LYSLDANFVYLNFLLFPRYIRPMLLDILCRNEGADFFSNELPSNHHLIHHIYNLGDCL ETEKLCKGDVLKAMKRHPHVILFSTNPKMPNIGLVKQLGRFWDKRDSKDEDSEGPGSR IQLLGSGYRDDGSMGSTGSTDSGSSDSDMGFMDLGIREDPEREGSVEKVEAPRRPSGG SPVEDRSSEEPEERDPPAVSTEQPSNSGLEGRTPNKRAGPPVSPHEPVKMRRLVVEVA VVDRLAGDFEHGETSQDDDTTTDEPSPTNTMDIEDDNYGSPPPVSTEPCSSKQAYRDE PAKDNNRTPTRPPVSTEPCSSKQAYRDEPAKDNNRTPTRPPVSTEPCSSKQAYGDEPV KAQKTPMRLNKLVTIPKDPKPPGTPDTPTRKRPGSPYRSNEPEEKRDPARQGIIDWFD NLYYPDDKTKEVPAGQQAQLYQQSPARPPRNENPELKSPSGNTRSHDCNSMSKSLYKR RKY" gene complement(<1410762..>1412261) /locus_tag="CAEBREN_01978" /db_xref="WormBase:WBGene00140703" mRNA complement(join(<1410762..1410944,1411704..1411807, 1412030..>1412261)) /locus_tag="CAEBREN_01978" /product="hypothetical protein" /db_xref="WormBase:CBN01978" /db_xref="WormBase:WBGene00140703" CDS complement(join(1410762..1410944,1411704..1411807, 1412030..1412261)) /locus_tag="CAEBREN_01978" /note="contains similarity to Pfam domain PF04155; contains similarity to Interpro domain IPR007284 (Ground-like domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45624.1" /db_xref="InterPro:IPR007284" /db_xref="PFAM:PF04155" /db_xref="WormBase:CBN01978" /db_xref="WormBase:WBGene00140703" /translation="MKSSCILVLVALVGSAHSTFFNGGCGCPPPPLCLPPPPPMCFTE IQLPPIRLPVIPLPRIELPQPCCPTCGCGRKKREIDSGVVVPQEQPEETVYTKDVSCN DDGLLAIMKKEMTTGESSAVKIALVEAAEQQLGGRFTVVCSQGAFSFVTSTTNYCLHS QSGLNCYLFRTQ" gene complement(<1413581..>1419887) /locus_tag="CAEBREN_18481" /db_xref="WormBase:WBGene00157206" mRNA complement(join(<1413581..1413678,1413762..1413925, 1414056..1414267,1414475..1415023,1415924..1416589, 1417165..1417542,1417983..1418980,1419568..1419682, 1419774..>1419887)) /locus_tag="CAEBREN_18481" /product="hypothetical protein" /db_xref="WormBase:CBN18481" /db_xref="WormBase:WBGene00157206" CDS complement(join(1413581..1413678,1413762..1413925, 1414056..1414267,1414475..1415023,1415924..1416589, 1417165..1417542,1417983..1418980,1419568..1419682, 1419774..1419887)) /locus_tag="CAEBREN_18481" /note="contains similarity to Pfam domain PF00225; contains similarity to Interpro domains IPR001752 (Kinesin, motor domain), IPR019821 (Kinesin, motor region, conserved site), IPR016160 (Aldehyde dehydrogenase, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45851.1" /db_xref="InterPro:IPR001752" /db_xref="InterPro:IPR016160" /db_xref="InterPro:IPR019821" /db_xref="PFAM:PF00225" /db_xref="WormBase:CBN18481" /db_xref="WormBase:WBGene00157206" /translation="MSASETSLRVVVRARPMNGRETKEGARRCVDFYENTGQICINDS ATFAFDSVFSDTVDQETVYEKTALPLLDRIFAGFNATVLAYGQTGSGKTYTMGTEDND GTDEMRRGIIPRLVNALFQRINSQEVPESFTVTVSMFEVYGDNVYDLLRADKVKLNVH GDEKSCTVVNLTAVPVIDLKGALKQLATGCHYRTKAETAMNAMSSRSHAVFTVFVEKT ATADSDSAFSAKLQLVDLAGSERLKKTEAEGNRMKEGININAGLLILSQVIAALATKQ KHIPYRNSVITRVLQDSLGGNSFTVFLACISPADTNSAETLNTLRYADRAKQIKNKPI VNKNPKAEEIAVLQAQLKRLQKENLELRQGIAPADVKYGDLANSAEILSLKDEVARMT EQLRDRAIKQSECIVRINHLTQRNARLEAAKTKFATIISDVRTTLQNEEMTDPPELIR SIYQLIGDDSSEQSSTTMQEEDHDDTVGLGAAGVGADDTIYDAERLPELQAELDDLDK QIALKDENRKKEADEQREFIEAMQQREAEKTELVQRCSLLETEINKLRQDCKKANTAT KLAEERRQRLKELERQHAEDKKTLAELKKLQETRKRMEDTLKKTEDELKNLKTQRLRL LREQRAEASKFQTYKQKHEREMANIKSKLQKREMDVVRQKRVDEQKLAVLQQRLAESN RANKTLRELNLKRANRKTSPPSDAAAFQTLVEEELELEKTSLRCQLLCEELRRQRQDL MHRINEIESRKFEGAKRRRMSNVDPNVSIVVEGEEEFELKRKAELDALRLNLDTINEE IKDSLRNETISQNEERAAARFEKVPIEHRPIFEAVFSQSVTAIRRELELEFQLARTKT EMTNKLNVKASQEEKKKREDEEMRAKIRELTNSLEVAKAEMHGKMKFLLGLIMTGKID EKLFQQFDSLNNQYCDVEQKIKKVARRRTTHNHFSALTPKPELKRNERSRRGVEHYGK VVNSEDLTVDDSRHFVQKRPVPTLKAIDLDRTTDENVKRRVAMSPIKMDDDTRIVEDD EDIENETFNNATFVKDVSDGVAAPNATFVVHKTDNNGSSIIIDEPTASDDLPPVRRKH RRTELGPAP" gene <1420491..>1423632 /locus_tag="CAEBREN_08153" /db_xref="WormBase:WBGene00146878" mRNA join(<1420491..1420562,1420614..1420721,1420893..1420973, 1421024..1421112,1421215..1421307,1421361..1421445, 1421591..1421768,1421883..1421980,1422131..1422246, 1422444..1422503,1422907..1423076,1423255..1423361, 1423501..>1423632) /locus_tag="CAEBREN_08153" /product="hypothetical protein" /db_xref="WormBase:CBN08153" /db_xref="WormBase:WBGene00146878" CDS join(1420491..1420562,1420614..1420721,1420893..1420973, 1421024..1421112,1421215..1421307,1421361..1421445, 1421591..1421768,1421883..1421980,1422131..1422246, 1422444..1422503,1422907..1423076,1423255..1423361, 1423501..1423632) /locus_tag="CAEBREN_08153" /note="contains similarity to Pfam domain PF01490; contains similarity to Interpro domain IPR013057 (Amino acid transporter, transmembrane)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45544.1" /db_xref="InterPro:IPR013057" /db_xref="PFAM:PF01490" /db_xref="WormBase:CBN08153" /db_xref="WormBase:WBGene00146878" /translation="MANPARDGYQEFDNEPDLPGEAAETRHDIPTTRPRANTASEDTS LFQDRLPTENSLTPEQAFIHMVKAMLGTGLLSLPLAFKHSGLFLGLILTVIICLICLY CMRQVVFAAHFVCNRNGRDLIDYANIMRGAVEMGPPWIKRKGYFFKQLVNVNMFISQL GFCCVYFVFMADNLEDFFNNNTSIHLSKAVWMLLLLIPMLSICSIRRLSILAPFAMAA NVVYVAAVAVVLFFFLSDLRPINSLPWFGKASDLPLFFGTVMFAFEGVAVIMPIENRM QSPHSFIAWNGVLNSSCLVVLAIFSVTGFYGYLSLGNDVKDTATLNLPMTPFYQTIKL MFVACIMISYPLQFYVPMERIEKWITRKIPVDKQTFYIYFARYTGVLLTCAIAELIPH LALFISLIGAFSGASMALLFPPCIELLTSYAKNELTRGLWIKNSVLLIFAVIGFTTGT YSALVEIAKTFA" gene <1424184..>1425497 /locus_tag="CAEBREN_20858" /db_xref="WormBase:WBGene00159583" mRNA join(<1424184..1424222,1424471..1424613,1425359..>1425497) /locus_tag="CAEBREN_20858" /product="hypothetical protein" /db_xref="WormBase:CBN20858" /db_xref="WormBase:WBGene00159583" CDS join(1424184..1424222,1424471..1424613,1425359..1425497) /locus_tag="CAEBREN_20858" /note="contains similarity to Pfam domain PF09806; contains similarity to Interpro domain IPR019187 (Cyclin-dependent kinase 2-associated protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45562.1" /db_xref="InterPro:IPR019187" /db_xref="PFAM:PF09806" /db_xref="WormBase:CBN20858" /db_xref="WormBase:WBGene00159583" /translation="MANHDELNLTNIQIAEGTPYYDVLLQIIQEIGKDIRPTYTFNKS TCEKLKRHIHTAKVLIKACQTEAENDRKKADAAVEAMRIQALKEAREAKKEQQQKQEE EADN" assembly_gap 1431324..1431333 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1432857..1432866 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1438315..>1440465 /locus_tag="CAEBREN_05806" /db_xref="WormBase:WBGene00144531" mRNA join(<1438315..1438449,1438596..1438678,1439263..1439378, 1439434..1439578,1439766..1439835,1440097..>1440465) /locus_tag="CAEBREN_05806" /product="hypothetical protein" /db_xref="WormBase:CBN05806" /db_xref="WormBase:WBGene00144531" CDS join(1438315..1438449,1438596..1438678,1439263..1439378, 1439434..1439578,1439766..1439835,1440097..1440465) /locus_tag="CAEBREN_05806" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45594.1" /db_xref="WormBase:CBN05806" /db_xref="WormBase:WBGene00144531" /translation="MLRISLILSILVVVASATTCPHSVNSRIQECVQPVADYAKVLNN QDSRTSGSEFGSAFSLPNMGGRVFNELCRLIAKFNSCVRDYRSTCPRHVTISLIDSSY GYLCNEGYNTFMESAECLMELDRKPSVKRCHDETLKEIESANTESGVSMPAKVDRMCG ALNFFSGCVRSPIKQDCGFSAWQVIYRVLKDTTNTLMPACQFTGTSQKLSAFQKENNI TSSTYPPSTTVIPSSTTIPRTTVTPQRTTTRITVDLEAEEIEEVDEEFQEKLNQKKKM RKIQSAELTDGADRIDGIVLVLFLAIFIF" gene <1441094..>1442190 /locus_tag="CAEBREN_06964" /db_xref="WormBase:WBGene00145689" mRNA join(<1441094..1441108,1441843..>1442190) /locus_tag="CAEBREN_06964" /product="hypothetical protein" /db_xref="WormBase:CBN06964" /db_xref="WormBase:WBGene00145689" CDS join(1441094..1441108,1441843..1442190) /locus_tag="CAEBREN_06964" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45672.1" /db_xref="WormBase:CBN06964" /db_xref="WormBase:WBGene00145689" /translation="MQCPFHAYRAQLYVMVLNQFNANKYRGMRLYRHHGWSFPNSDWF SDDYEQRLMESDILKLEELMKVYVGAACELNQLENKYGVPKDSSAMKEKSDNTSGKFW KGFKEKCLAVKKKVFKGS" gene complement(<1442357..>1443189) /locus_tag="CAEBREN_25406" /db_xref="WormBase:WBGene00164131" mRNA complement(join(<1442357..1442632,1443133..>1443189)) /locus_tag="CAEBREN_25406" /product="hypothetical protein" /db_xref="WormBase:CBN25406" /db_xref="WormBase:WBGene00164131" CDS complement(join(1442357..1442632,1443133..1443189)) /locus_tag="CAEBREN_25406" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45565.1" /db_xref="WormBase:CBN25406" /db_xref="WormBase:WBGene00164131" /translation="MADCKDEIHDECNPDWCPFEGYRFIEKLTKSFERHVVDEVSKIW RKDFYIWRHAEKDEVQKRTLWDTVKNGFFTMKMKIFGCPKPSSKPRRKQVNDGIDIYF EEFFNYDR" gene complement(<1447020..>1448053) /locus_tag="CAEBREN_04570" /db_xref="WormBase:WBGene00143295" mRNA complement(join(<1447020..1447403,1447997..>1448053)) /locus_tag="CAEBREN_04570" /product="hypothetical protein" /db_xref="WormBase:CBN04570" /db_xref="WormBase:WBGene00143295" CDS complement(join(1447020..1447403,1447997..1448053)) /locus_tag="CAEBREN_04570" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45829.1" /db_xref="WormBase:CBN04570" /db_xref="WormBase:WBGene00143295" /translation="MPKLRYVNCGDEDCEECRLEEYRLELVEKCREQYIINDELKTEM RRRRGLPIPDKLAPAYLGIRRAFMKKTARELERYLRHLQRIEGLYVTEKWKKGGKIEL TTYNYYEQGNQDDVSEVLKEFWKNFKKTCRDLKRIFSNRVNSAH" gene complement(<1449163..>1450512) /locus_tag="CAEBREN_15227" /db_xref="WormBase:WBGene00153952" mRNA complement(join(<1449163..1449498,1449796..1450149, 1450474..>1450512)) /locus_tag="CAEBREN_15227" /product="hypothetical protein" /db_xref="WormBase:CBN15227" /db_xref="WormBase:WBGene00153952" CDS complement(join(1449163..1449498,1449796..1450149, 1450474..1450512)) /locus_tag="CAEBREN_15227" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45717.1" /db_xref="WormBase:CBN15227" /db_xref="WormBase:WBGene00153952" /translation="MEVNYDPKKSDRYQHQHLELVEKTVKLLEIINAKLARFEKITGK SLVLPFTSIEYRAELMRETTENVERWRKILEYHRQRLIKFERRYGLTNPDETWAGLVN RWINRVKNLKNTVGSKLKWRNSDEKKVSEQKSHPETVEQIMELYEIFDTKLARLENIT GKTPLRRPTLTNFRAELMGYNPEDVEITHRFLEDCKRRLTGMEKECGLTNPDKTWAGL VNRWINRVIQIKNTVGSRLTNLSR" gene complement(<1452485..>1455845) /locus_tag="CAEBREN_32758" /db_xref="WormBase:WBGene00194953" mRNA complement(join(<1452485..1452768,1453235..1453581, 1454853..1455022,1455416..1455457,1455510..1455592, 1455641..1455753,1455808..>1455845)) /locus_tag="CAEBREN_32758" /product="hypothetical protein" /db_xref="WormBase:CBN32758" /db_xref="WormBase:WBGene00194953" CDS complement(join(1452485..1452768,1453235..1453581, 1454853..1455022,1455416..1455457,1455510..1455592, 1455641..1455753,1455808..1455845)) /locus_tag="CAEBREN_32758" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45748.1" /db_xref="WormBase:CBN32758" /db_xref="WormBase:WBGene00194953" /translation="MADFDEYFYQSITTTLEQKSSLDEIQMSRKQRYYQRLNRPKPPP EDAITKKRKKLWVKDDSDDEMPKATPKIKRPRKKAAPKENVVEVIVLDGDTETSSSSF TPPVTSKPAPEVTKKLEMEKKDPLVDDDEGKAPEPAIQIEDEEPPKMTPHELRLRGRL PTWYHERQAHRAALLQKNLERKEIRLKMEKEMAEKQAEEDKKEERRKRDRERKREKTI LKKIGDEGGTSGKGRKDLKAMVRENNQNLDEKLERKREKQEKHMITDPSLDPSLISLG APEIVPWAPKRPPQPPKKTSPDPSLPSTSSSSESEDLQPLEEEDVPMELVENSGVQNL DDNLFDPVDFADMVIDSPTVRRGF" assembly_gap 1453988..1453997 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1456720..>1457799 /gene="Cbn-nud-1" /locus_tag="CAEBREN_19826" /db_xref="WormBase:WBGene00158551" mRNA join(<1456720..1456823,1456926..>1457799) /gene="Cbn-nud-1" /locus_tag="CAEBREN_19826" /product="CBN-NUD-1 protein" /db_xref="WormBase:WBGene00158551" CDS join(1456720..1456823,1456926..1457799) /gene="Cbn-nud-1" /locus_tag="CAEBREN_19826" /note="contains similarity to Pfam domain PF04969; contains similarity to Interpro domain IPR017447 (CS domain)" /codon_start=1 /product="CBN-NUD-1 protein" /protein_id="EGT45676.1" /db_xref="InterPro:IPR017447" /db_xref="PFAM:PF04969" /db_xref="WormBase:CBN19826" /db_xref="WormBase:WBGene00158551" /translation="MSQTDRFDSVFLSLAQQLRGGVPEMLDVMFDFLSRKTDFYSGAG VDQARSLLLEKFDKHGGKAMKEAEEARKRKEENERKLAERRAAQKAKEEEEFKNAAQV VELTDEEAAAFEKEQEAKKKADMQPTSSEKAAAAKEDEEEAAEEEKEKNLMKPNSGNG ADLAKYQWTQTLQEVECRIPINAGFALKSRDVVVKIEKTHVAVGLKNQPPVVEGKLCA TIKVENCNWVIENGKAIVLTLEKINDMEWWNRFLDSDPPINTKEVQPENSKLSDLDGE TRAMVEKMMYDQRQKEMGLPTSDDKKKQDMLAKFMEQHPEMDFSNAKIG" gene <1458529..>1459094 /gene="Cbn-dro-1" /locus_tag="CAEBREN_15830" /db_xref="WormBase:WBGene00154555" mRNA join(<1458529..1458906,1458954..>1459094) /gene="Cbn-dro-1" /locus_tag="CAEBREN_15830" /product="CBN-DRO-1 protein" /db_xref="WormBase:WBGene00154555" CDS join(1458529..1458906,1458954..1459094) /gene="Cbn-dro-1" /locus_tag="CAEBREN_15830" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR009072 (Histone-fold), IPR007125 (Histone core), IPR003958 (Transcription factor CBF/NF-Y/archaeal histone)" /codon_start=1 /product="CBN-DRO-1 protein" /protein_id="EGT45771.1" /db_xref="InterPro:IPR003958" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="WormBase:CBN15830" /db_xref="WormBase:WBGene00154555" /translation="MDEDNEIGLPQKGINQIIKEVVPEMRIANESRDMINACCVEFVK HIAREAQKIASMDQRKTIYHEHVQKALQNLGFTADYLEAADSVLDACKVEAEKKLRRK NSRLEKCGIPEEKLYEMQQELIQKARQQELDAQLAQQQAQNAAVAAANAALGADMTPV MAPPRSDDDYDN" gene <1460027..>1460719 /locus_tag="CAEBREN_06394" /db_xref="WormBase:WBGene00145119" mRNA join(<1460027..1460490,1460545..>1460719) /locus_tag="CAEBREN_06394" /product="hypothetical protein" /db_xref="WormBase:CBN06394" /db_xref="WormBase:WBGene00145119" CDS join(1460027..1460490,1460545..1460719) /locus_tag="CAEBREN_06394" /note="contains similarity to Pfam domain PF01652; contains similarity to Interpro domains IPR001040 (Eukaryotic translation initiation factor 4E (eIF-4E)), IPR019770 (Eukaryotic translation initiation factor 4E (eIF-4E), conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45706.1" /db_xref="InterPro:IPR001040" /db_xref="InterPro:IPR019770" /db_xref="PFAM:PF01652" /db_xref="WormBase:CBN06394" /db_xref="WormBase:WBGene00145119" /translation="MSDQEQSQAGLYPLKRNWTWWYLNDERNKSWEDRLKKVYTFNTV PEFWALYDAIRPPSGLNPMCDYNVFRDGIQPMWEVPENANGGRWLIVIDRSKTPEMVD MVWLEILMALVGEQFGQDMEAICGLVCNVRGKGSKISVWTKDCNDDDANMRIGVVLKE KLMNASKDLPKPLFDVIRYEDHESCQKKTSSVVKAKLSLHSSDVPPEKLNGL" gene <1461330..>1463201 /locus_tag="CAEBREN_08690" /db_xref="WormBase:WBGene00147415" mRNA join(<1461330..1461492,1462021..1462802,1462965..>1463201) /locus_tag="CAEBREN_08690" /product="hypothetical protein" /db_xref="WormBase:CBN08690" /db_xref="WormBase:WBGene00147415" CDS join(1461330..1461492,1462021..1462802,1462965..1463201) /locus_tag="CAEBREN_08690" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR020610 (Thiolase, active site), IPR020613 (Thiolase, conserved site), IPR016038 (Thiolase-like, subgroup), IPR020615 (Thiolase, acyl-enzyme intermediate active site), IPR002155 (Thiolase), IPR020616 (Thiolase, N-terminal), IPR020617 (Thiolase, C-terminal)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45814.1" /db_xref="InterPro:IPR002155" /db_xref="InterPro:IPR016038" /db_xref="InterPro:IPR020610" /db_xref="InterPro:IPR020613" /db_xref="InterPro:IPR020615" /db_xref="InterPro:IPR020616" /db_xref="InterPro:IPR020617" /db_xref="WormBase:CBN08690" /db_xref="WormBase:WBGene00147415" /translation="MSLGVFIVGAKRTAFGTFGGKLKALSATDLGVIASQAALKHANV GADAVDHVIFGNVVASSRDGIYLTRHIGLKAGVPQNVGALTVNRLCGSGFQAVVNAAQ QIKLGEANIVLAGGTENMSMVPFAVRDVRFGTALGKKYEFEDMLWDSLSDPYAKLAMG QTAEKLGAQYKVTRADADEFALRSQTLWKKAQDAGIYKNEIVGITVKGRKGEENFDVD EHPRPTTAESLAKLKPVFQKDGLVNAGNASGISDGAAALVVAGEEAVKAKGLKPLARV VAYSAVGCDPTIMGIGPAPAIREVLKQSGLKIGDIDIIEVNEAFAPQALAVQRELGIP MEKLNVNGGAIALGHPLAASGARISTHIVHELQRRNVKYGIGSACIGGGQGIAILFEK I" gene <1467693..>1471971 /gene="Cbn-mtm-6" /locus_tag="CAEBREN_16449" /db_xref="WormBase:WBGene00155174" mRNA join(<1467693..1468052,1468251..1468454,1468601..1468676, 1469003..1469157,1469273..1469548,1469633..1469923, 1470129..1470353,1470608..1470697,1470797..1470880, 1470930..1471126,1471306..1471666,1471900..>1471971) /gene="Cbn-mtm-6" /locus_tag="CAEBREN_16449" /product="CBN-MTM-6 protein" /db_xref="WormBase:WBGene00155174" CDS join(1467693..1468052,1468251..1468454,1468601..1468676, 1469003..1469157,1469273..1469548,1469633..1469923, 1470129..1470353,1470608..1470697,1470797..1470880, 1470930..1471126,1471306..1471666,1471900..1471971) /gene="Cbn-mtm-6" /locus_tag="CAEBREN_16449" /note="contains similarity to Pfam domain PF06602; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR010569 (Myotubularin-related), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000306 (Zinc finger, FYVE-type)" /codon_start=1 /product="CBN-MTM-6 protein" /protein_id="EGT45665.1" /db_xref="InterPro:IPR000306" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR010569" /db_xref="InterPro:IPR016130" /db_xref="PFAM:PF06602" /db_xref="WormBase:CBN16449" /db_xref="WormBase:WBGene00155174" /translation="MSSTAASTTTSTPSSSTMTAWWNNMTLSGIYPSISSSTPSTSTS SSWSSHFIFGGTPGNVAMTPQSTVPPSALSSGYTEDITVAGSLLKDKIHVLMDSILGK ESVHAGCGYGEDGRIAMMVDKVYLVDRLGCHENLVGTVHVTTTHIIFRAEDGTKELWL ATGLIASVERGTLTAAGCTLVIRCKHFQVITLLISRDKACQDLYETLQRAAKPVSVNV TELLAFENREPVDDARGWKRLDWNSEMTRQGVDRSKWMQSPINEGYTVCDTYPDKLWF PTAATTSVLLGSCKFRSRGRLPVLTYFHRQTEAALCRCAQPLTGFSARCVEDEKLMEL VGKANPNSDNLFLVDTRPRVNAMVNKVQGKGFEDERNYSNMRFHFFDIENIHVMRASQ NRLLDAVTKCRDVTEYWKTLESSGWLKHVRSVVECGLFLAESISRGTSCVVHCSDGWD RTSQVVAMCQLLLDPYYRTIHGFQVLIEKDWLGFGHKFDDRCGHVGALNDEAGKEVSP IFTQWLDCVWQIMQQKPRAFQFNERYLIEMHEHVYSCQFGTFIGNCDKDRRDLNLSKR TKSLWTWMDARHDDYMNPFYSPTAHVALLDLDTRAARFTVWTGMYNRFDAGLQPRERL EDLTMAAMEHVGVLESHVAQLRTRLAELKSQQQQHIMTTSATTPTNMVDSGMSSATDE LKNLMISTTSHPLDPLLNIATSPVPSHPLERATSQESGVMDSSLYYPDEALTKYSLKW QPLRGAERCSDPACRGEFSSTIERRIHCHLCGMIFCRRCLKVTADERERVCDKCKE" gene complement(<1472679..>1474936) /locus_tag="CAEBREN_23169" /db_xref="WormBase:WBGene00161894" mRNA complement(join(<1472679..1472928,1473282..1473427, 1473481..1473621,1473841..1474038,1474146..1474533, 1474779..>1474936)) /locus_tag="CAEBREN_23169" /product="hypothetical protein" /db_xref="WormBase:CBN23169" /db_xref="WormBase:WBGene00161894" CDS complement(join(1472679..1472928,1473282..1473427, 1473481..1473621,1473841..1474038,1474146..1474533, 1474779..1474936)) /locus_tag="CAEBREN_23169" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45702.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN23169" /db_xref="WormBase:WBGene00161894" /translation="MAHPPDQPVTYEYQYQRVCDWLKSIARPNGMEFLDIQADVMLKF MKTLDRKTRSNLEKSCKLLLSISRQEKPRLKHLFLHFTTMWNHDKYVEITAHFSEDFT FHAVFMNKEKTANWITGGWSIDRKKNITSGYFNPEKLRLSATFTERTSRYMEYWLRNF QIDTLKVKVENLIPGKEQEIQQMNYIGPIPPLRLKKFIIHGANNIRFIKNWMDNLVPD IVDSIDPSRKTIDVEFIDVAKLNQIFHHNLLTTGKVNLTFNRVNTLCTRHTLSYLNCP LVSIMARQVPSEAVNIFLRRWVRGEMTEDFQYIHITETTQWKSQAIQIREALKGIRYQ AVDLKTTVPLRCLQHRKDVANEKCQIYQITGPRPAFCVQSGKEFIFEVPKTAELPKIT VDPPMLNNAFADYERQKNRIYMDLFRKRLMRIFN" gene <1481728..>1485249 /locus_tag="CAEBREN_32063" /db_xref="WormBase:WBGene00194028" mRNA join(<1481728..1481847,1482013..1482721,1482992..1483113, 1483430..1484952,1485144..>1485249) /locus_tag="CAEBREN_32063" /product="hypothetical protein" /db_xref="WormBase:CBN32063" /db_xref="WormBase:WBGene00194028" CDS join(1481728..1481847,1482013..1482721,1482992..1483113, 1483430..1484952,1485144..1485249) /locus_tag="CAEBREN_32063" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45631.1" /db_xref="WormBase:CBN32063" /db_xref="WormBase:WBGene00194028" /translation="MSKKTIEMKLVCCDDRNPIIVRDRKLIQKTPYLNRAASAQNKKW TFNSVKFSNPVQIPHRRSIVEFVLHYSMIYRDPCLLEDQSLPAKLLEYKEANAKGLEE LKELLECSRFLECSVLTECLSVVMAKKMQNLPFEQMQALFGVKFFTDDELAKDAADQR RIQEAKRRRVELEEQQAVLSELRGVQSSEELDQESQDLQRKILLTAKEEIPRYVPQRL AEDDEEEEVVPRRPKCTGAFETPLVQYGPLGYLDVPEEEEPEVVAPKPNKAAIKAQQA AARNMSKQVKMRVVCKDGTIIITDRKLIMKTPFLKKAASAENPKWTSKHITFKKPLDI PYPKAVVEFVLEYLHKYPDVRQFTGVPDEIKLAKYPEANAKSVEELKVILDCAMNFSL RAFCHCIGYVMAEKLSLMDRKYVKEFLGDEYVQVSVSKRREDEELKNTCKAIREHLQM GDLITIVEKVDPENSEGTPSLTVEEVPTSAEDPLEDPPEAQNTPVEEVTEDIQDMLTD QNLEHHLRPLISGTKKMNLDEIYTQETPVEQPIASRTFKDFCDMRRRPAIQSFQEQEP ELFPGISYDSEVYKAMVNTRLQHEELLGSVREEPEDSDLTSFEDQRSELLMCLADTFC NIVDDCCTPSSRSQGQDQDQDQAQAQVLECEPGSLSSEEQKELQNQDSDLDDNDTSSR CSEDGYLAGSETSSISSEYQDQEDQELEDCLVSLDCYLAEFESSSLSSEDLESNFDLT DIQTSSLSSKKQELEVQDLEDYPANVATGNDIMVFETSSPIFKSLKKENYPTTESLIG QAETLFADLDGDCTRAQRRMVVDLIMSSVEEGINPPGRKFLPTGGGGRGKPMMFSDGG PFL" gene <1489242..>1494646 /locus_tag="CAEBREN_04034" /db_xref="WormBase:WBGene00142759" mRNA join(<1489242..1489505,1491676..1491758,1494631..>1494646) /locus_tag="CAEBREN_04034" /product="hypothetical protein" /db_xref="WormBase:CBN04034" /db_xref="WormBase:WBGene00142759" CDS join(1489242..1489505,1491676..1491758,1494631..1494646) /locus_tag="CAEBREN_04034" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45728.1" /db_xref="WormBase:CBN04034" /db_xref="WormBase:WBGene00142759" /translation="MTPSGNLLAETARATLISLKEKDAQIVESYAKLTEKLEKRRTRA NEMAAQSNVTPIGSIDFSIRQMKKPRLVELRTDFLKKPTESAQKNNSNGNWKTNNSSN QKDNQGNQKNKQGQTVEG" gene <1496392..>1498058 /locus_tag="CAEBREN_30021" /db_xref="WormBase:WBGene00191986" mRNA join(<1496392..1496750,1496943..1497331,1497820..>1498058) /locus_tag="CAEBREN_30021" /product="hypothetical protein" /db_xref="WormBase:CBN30021" /db_xref="WormBase:WBGene00191986" CDS join(1496392..1496750,1496943..1497331,1497820..1498058) /locus_tag="CAEBREN_30021" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45613.1" /db_xref="WormBase:CBN30021" /db_xref="WormBase:WBGene00191986" /translation="MRADIRGKNNNRICHLTKSFSILEGRKQYNSITGSSMRWKIDIL LEAAGNYQKFMMTCQICRSTVNETANISTRHQSKKYNKWSNTGFYDVDARSQVKSQDE PVIKKNNHWKYDGSNAELKLQNVRITPPSISSQYEENETAHQQCAIRLMKEKKRKETT HEEDTAMEWKKVQYMPQQSYQPDQSSLLMFSQSQLRPCCAIYITGSSTNSCQRKKNRL KNPVKKKRPTNEKNQRTSTSEKEKKGNLCLQRVFNVQSMQYFTMAYYPMVISMVITMP ILNGYVLCGYNGRFRVNFNQCTYISINGYLQIIQWLVNYAVTILYNGTKFLD" gene <1499211..>1501825 /locus_tag="CAEBREN_03515" /db_xref="WormBase:WBGene00142240" mRNA join(<1499211..1499388,1500011..1501746,1501790..>1501825) /locus_tag="CAEBREN_03515" /product="hypothetical protein" /db_xref="WormBase:CBN03515" /db_xref="WormBase:WBGene00142240" CDS join(1499211..1499388,1500011..1501746,1501790..1501825) /locus_tag="CAEBREN_03515" /note="contains similarity to Pfam domain PF00665; contains similarity to Interpro domain IPR001584 (Integrase, catalytic core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45669.1" /db_xref="InterPro:IPR001584" /db_xref="PFAM:PF00665" /db_xref="WormBase:CBN03515" /db_xref="WormBase:WBGene00142240" /translation="MSRQIRTQLITSLVAVNREKTYTNWFHGPRWLSDNNDPDHPMKK ENNSLIVPSVPISDDNKDNHKSPSDQIVYQHNRITRKPKTPILKTKSELARQIVQKVH IESHHAGPKTTLGLILEKYSGTKWRVAVKKELSRCPVCRKENNHPFSEASPGDVPERR TTESRPFQHVGVDFAGPFKTYLRNSSEVEKSYIAFFTCTTTRLVHGETVRNLSTDEFL LSLSRFMSRRGYPDSITSDNATTFKLTAEILDKCSEKEDNYLAELAFDKLDKQKLDFL EKEMAKKKVKWYFNTALAPWQGGFYERLIGVLKKALKHSLGDSLLRIKDFETIVAECE SLVNRRPLTYIDEDGEDYKVLRPIDIITPGLYFAIFDENGLRDEYYEYTSNFREVRNY IKRFWDVFCRDYLTQLNTFKSIPQPNRAHAQNQVKPFLGEVVLLVDEKTPRKNWKMGI ITELMKGRDGEIRSLRIRTTEKRKKRDGTLPYKPFKTIEITRPLRLVIPLELRPKSRE ENEHENDETEQIVVPSVKIHVQRTLKHKQTEKKMFRPIIETQQNDFRRTLGRRPRFNL WNIMMMCFISMLVLMTAPTSAQTPKDDLKGIYTSLKPWHEGAQGMTFPRTTPPYPIQT TKTTTTVIPTTKRKRVLRLKPQQQQ" gene <1506070..>1507026 /locus_tag="CAEBREN_13158" /db_xref="WormBase:WBGene00151883" mRNA <1506070..>1507026 /locus_tag="CAEBREN_13158" /product="hypothetical protein" /db_xref="WormBase:CBN13158" /db_xref="WormBase:WBGene00151883" CDS 1506070..1507026 /locus_tag="CAEBREN_13158" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domains IPR001412 (Aminoacyl-tRNA synthetase, class I, conserved site), IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45779.1" /db_xref="InterPro:IPR001412" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN13158" /db_xref="WormBase:WBGene00151883" /translation="MFLSMLSKRTVNLIKWLKLKLKHLIVDLKGRVFLSLQFKDRHEI EIHLDTNGYSYDLGMLLSDRILVRLITNFEHQGDIYFGFDFPNVRHWIGHLQYVFSYQ YVDLSFFELRTLCYSFESIVKTIEGIPIQVLQAAGSYDVFRRVLYYFPTSRLLHLLGR AVQGAHSAPCSQFMAKLLIQNFDALYFDSSISITLDSLLMMNSPFLWTFAPKLTDREL NMYIRFWMNNPTSKLEYLRLGYHSSDPFRVFNKNVIFKGIDYIERPSDLKRDFHFSID FHPFYNQWMTVGGGYDITRRDGATCTISIYSERPLFELFIWP" gene complement(<1511814..>1520661) /locus_tag="CAEBREN_29522" /db_xref="WormBase:WBGene00191487" mRNA complement(join(<1511814..1511885,1512117..1512477, 1512692..1512888,1512938..1513021,1513119..1513208, 1517105..1517329,1517745..1518035,1518121..1518396, 1520632..>1520661)) /locus_tag="CAEBREN_29522" /product="hypothetical protein" /db_xref="WormBase:CBN29522" /db_xref="WormBase:WBGene00191487" CDS complement(join(1511814..1511885,1512117..1512477, 1512692..1512888,1512938..1513021,1513119..1513208, 1517105..1517329,1517745..1518035,1518121..1518396, 1520632..1520661)) /locus_tag="CAEBREN_29522" /note="contains similarity to Pfam domain PF06602; contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR010569 (Myotubularin-related), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000306 (Zinc finger, FYVE-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45640.1" /db_xref="InterPro:IPR000306" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR010569" /db_xref="InterPro:IPR016130" /db_xref="PFAM:PF06602" /db_xref="WormBase:CBN29522" /db_xref="WormBase:WBGene00191487" /translation="MRFEDIGISKVCDTYPDKLWFPTAATTSVVLGSCKFRSRGRLPV LTYFHRQTEAALCRCAQPLTGFSARCVEDEKLMELVGKANPNSDNLFLVDTRPRVNVM VNKVQGKGFEDERNYSNMRFHFFDIENIHVMRASQNRLLDAATKCRDVTEYWKTLESS GWLKHVRSVVECGLFLAESFSRGTSCVVHCSDGWDRTSQVVAMCQLLLDPYYRTIHGF QVLIEKDWLGFGHKFDDRCGHVGALNDKAGKEVSPIFTQRLDCVWQIMQQKPRAFQFN EQYLIEMHEYVYSCQFGTFIGNCDKDRRGLNLSKRTKSLWTWMDARHDDYMNPFYSPT AHVALLDLDTRAARFTVWTGMYNRFDAGLQPRERLEDLTMAAMEHVGVLESHVAQLRT RLAELKSQQQQQIMTTSSTTPTNMVDSGMSSATDELKNLMISTTSHPLDPLLNIATSP VPSHPLERATSQESGVMDSSLYYPDEALTKYSLKWQPLRGADRCSNPACRGEFSSTIE RRIHCHLCGMIFCRRCLKVTADGRERVCDKCKE" assembly_gap 1514613..1515206 /estimated_length=594 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1521109..>1521138) /locus_tag="CAEBREN_21189" /db_xref="WormBase:WBGene00159914" mRNA complement(<1521109..>1521138) /locus_tag="CAEBREN_21189" /product="hypothetical protein" /db_xref="WormBase:CBN21189" /db_xref="WormBase:WBGene00159914" CDS complement(1521109..1521138) /locus_tag="CAEBREN_21189" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45535.1" /db_xref="WormBase:CBN21189" /db_xref="WormBase:WBGene00159914" /translation="MGNSFLISC" gene complement(<1521616..>1527906) /locus_tag="CAEBREN_24623" /db_xref="WormBase:WBGene00163348" mRNA complement(join(<1521616..1521900,1522894..1523106, 1523157..1523318,1523369..1523479,1523647..1523656, 1525214..1525268,1525566..1526985,1527430..>1527906)) /locus_tag="CAEBREN_24623" /product="hypothetical protein" /db_xref="WormBase:CBN24623" /db_xref="WormBase:WBGene00163348" CDS complement(join(1521616..1521900,1522894..1523106, 1523157..1523318,1523369..1523479,1523647..1523656, 1525214..1525268,1525566..1526985,1527430..1527906)) /locus_tag="CAEBREN_24623" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR015806 (Pyruvate kinase, beta-barrel), IPR000477 (Reverse transcriptase), IPR001584 (Integrase, catalytic core), IPR015793 (Pyruvate kinase, barrel)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45586.1" /db_xref="InterPro:IPR000477" /db_xref="InterPro:IPR001584" /db_xref="InterPro:IPR015793" /db_xref="InterPro:IPR015806" /db_xref="WormBase:CBN24623" /db_xref="WormBase:WBGene00163348" /translation="MGVIEPVSHSKWASPIVVIKKKETGKIRACGDFKVSGLNKALLE EYHPLPTSEDIFGTLKGSVFSQIDLRDAYLQVELDEESQKVVVINTHKGLFKYKRMAF GLKTAPAIFQKIVDKMIAGIPGVAAYLDDVIVSAESHEEHEKTLTKLFQRLQEYGFRI EKEALALVYTVKKCHKFIFGRRFTLHTDHRPLLALFGSNKDLPVHAQNRVVRWAMTLM SYDFDITYVNTTKFAKADWLSRVIQEYPKNEDDIVIAEVDMEDAVDDWNSEDVTPVLE THIRNASAEDKELTEIMDLVENNAWKFKPKSEVEKSWHHVKDRLKLIRNCLLLDDRVV VPKVLQAKVLQQLHEGHPGVVKMKHKARSFVYWKGLDSQIEKVVQNCCSCQENAKMPR VVPLKPWPVPEAVWKRVHVDFAGPVDGLWFLVVVDAKSKYAEVKLTRTISAVATVDLL DEVFSVHGYPELIVSDNGTQFTSQFFQDMCTSYGISHKTTAVYYPRSNGAAERFVDTL KRGIAKIRETGSVNQQLLNKFLINYRNSPHASLNGATPAEVHFNRKIRVKMSLLLPRE RVEAASELTPYQDKMKSAYDKRNAARANSFQVGQSVYARVQHGNKFSWEYGEIRRRIG SVLYEVQVERSSRRQSDILGRLDETSECFPAMPDDDDDDYSGRRVVKPKPIAEKYAKH LGSEFATGKTFVTGSDNHQKDFYGSQQVRNDAMGSSGSSTPLTEDEKNKLSAKILKAE MKGDKDLVKKLKRKLESGVSGDDEPPKSKSKDVTMMRRRSDSDRHGEGSSRMRREYEK SQDLDSIIQVRLSESSLIADARTGILKGGAEVDLKRGSTVRLTTDILIREIGSSKTIY IDLPRLPVSLKNGSRVLIANNISLMVKRVELGDLICRVENGGMVGDNEPVWFEF" assembly_gap 1527227..1527295 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1528452..>1529499) /locus_tag="CAEBREN_09237" /db_xref="WormBase:WBGene00147962" mRNA complement(join(<1528452..1528634,1528738..>1529499)) /locus_tag="CAEBREN_09237" /product="hypothetical protein" /db_xref="WormBase:CBN09237" /db_xref="WormBase:WBGene00147962" CDS complement(join(1528452..1528634,1528738..1529499)) /locus_tag="CAEBREN_09237" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45808.1" /db_xref="WormBase:CBN09237" /db_xref="WormBase:WBGene00147962" /translation="MANVEAMGDVLRGILEQLAKSNEISQALIAENRALKEMHAASPV LAASPSTEMVRAQAGGHRTVSNAKLMGDLARRLPKYAYSVTEPDSFKKWIGRYELVFK EDGENLSERERTRLLIGCLEESTFQRFVDSQRDIEDIYNVTFDETVKALTKVFGNQSS LMVRRQACLQIARSSGLYEDPVEYTNKVGEAVVDAQLAKMSGDDWGVFVFLRGLDTSG DSAAKVYLMQYCESVEKKGETVTLSGIHDEWVRFLQLPNLHHKHLVNRKAPVKSRGSA LIATVQDMKLKNVSREKGPSSKRSLPKKREPNPSKWME" gene complement(<1529658..>1531635) /gene="Cbn-atp-2" /locus_tag="CAEBREN_22313" /db_xref="WormBase:WBGene00161038" mRNA complement(join(<1529658..1530068,1530116..1530173, 1530322..1530387,1530949..1531220,1531519..>1531635)) /gene="Cbn-atp-2" /locus_tag="CAEBREN_22313" /product="CBN-ATP-2 protein" /db_xref="WormBase:WBGene00161038" CDS complement(join(1529658..1530068,1530116..1530173, 1530322..1530387,1530949..1531220,1531519..1531635)) /gene="Cbn-atp-2" /locus_tag="CAEBREN_22313" /note="contains similarity to Pfam domain PF02874; contains similarity to Interpro domain IPR004100 (ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)" /codon_start=1 /product="CBN-ATP-2 protein" /protein_id="EGT45769.1" /db_xref="InterPro:IPR004100" /db_xref="PFAM:PF02874" /db_xref="WormBase:CBN22313" /db_xref="WormBase:WBGene00161038" /translation="MSVEIEVLIKYPDQDEPTIYRDADFLKRCPSIDDTLKKTSPNWA LEGIKLPTPIVMSWPKDTMEFCFNHAHRYTLPKSPEEPDFEEYKEANEKTLDELKAIA TCATAMGCSYSFCKALDFVIGEKVKVERDPKETSALLDFDPWGTLGAFVGLEKELHTG VATQQAAAATKVSAKATAANASGRIVAVIGALVDVQFDENLPPILNGLEVVGRSPRLI LEVSQHLGDNVVRCIAMDGTEGLVCGQPVADTGAPVKISDAPETLQRILLLVSSKDST FGDQDEIRTHAGKSQWISSIREARGRPRWNN" gene <1533126..>1534170 /locus_tag="CAEBREN_10414" /db_xref="WormBase:WBGene00149139" mRNA join(<1533126..1533242,1533796..>1534170) /locus_tag="CAEBREN_10414" /product="hypothetical protein" /db_xref="WormBase:CBN10414" /db_xref="WormBase:WBGene00149139" CDS join(1533126..1533242,1533796..1534170) /locus_tag="CAEBREN_10414" /note="contains similarity to Pfam domain PF01466; contains similarity to Interpro domains IPR016072 (SKP1 component, dimerisation), IPR011333 (BTB/POZ fold)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45657.1" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR016072" /db_xref="PFAM:PF01466" /db_xref="WormBase:CBN10414" /db_xref="WormBase:WBGene00149139" /translation="MSVEIEIPIKFKDQEETSILRDVNVVKQCPVIVRALEGRNPDWE TKGIKLGYTLEVEMKKAAGDFVFTYNTRYKLPESEDVNPKLEDFADINEKTLPELKEI IEAASYLENNQFMNCVAFVIAQKLNDLTIEEIAEYFNVPYEAETSFFAKRDGWVRAPS GIF" gene <1535791..>1536192 /locus_tag="CAEBREN_20745" /db_xref="WormBase:WBGene00159470" mRNA <1535791..>1536192 /locus_tag="CAEBREN_20745" /product="hypothetical protein" /db_xref="WormBase:CBN20745" /db_xref="WormBase:WBGene00159470" CDS 1535791..1536192 /locus_tag="CAEBREN_20745" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45653.1" /db_xref="WormBase:CBN20745" /db_xref="WormBase:WBGene00159470" /translation="MACVNETRRIVILCVLLILFIGMQATTSSWIEVKPIKMTDCNSP FAFTYIQSPKKFDCAKIVSPPTAKIINGVADMYIQNLTNRLIPSIKCTIEVHRRCSYN IAWLKHEENKTFVQFEFRKHNSGGVFECESD" gene complement(<1538052..>1538718) /locus_tag="CAEBREN_01983" /db_xref="WormBase:WBGene00140708" mRNA complement(join(<1538052..1538435,1538602..>1538718)) /locus_tag="CAEBREN_01983" /product="hypothetical protein" /db_xref="WormBase:CBN01983" /db_xref="WormBase:WBGene00140708" CDS complement(join(1538052..1538435,1538602..1538718)) /locus_tag="CAEBREN_01983" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45817.1" /db_xref="WormBase:CBN01983" /db_xref="WormBase:WBGene00140708" /translation="MSVTVEVPIKFQDQTEPSVLRDVAIIQKCPVLVRAIESKNPDWA TDGVQLKDAIEIPQKKAAGDFVFTHTLRYEAPDMDKDDAKVEDYKEANNKTLEELKEI IECASFLENSSMMHAVGFIIAKKMDTMTVEDIAEYLGTECLPEAQFFDETDGWVHAPQ EVFQNN" assembly_gap 1541563..1541718 /estimated_length=156 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 1542187..1542258 /locus_tag="CAEBREN_26894" /db_xref="WormBase:WBGene00187505" tRNA 1542187..1542258 /locus_tag="CAEBREN_26894" /product="tRNA-Ala" /db_xref="WormBase:CBN26894" /db_xref="WormBase:WBGene00187505" gene <1543382..>1543938 /locus_tag="CAEBREN_12837" /db_xref="WormBase:WBGene00151562" mRNA join(<1543382..1543498,1543555..>1543938) /locus_tag="CAEBREN_12837" /product="hypothetical protein" /db_xref="WormBase:CBN12837" /db_xref="WormBase:WBGene00151562" CDS join(1543382..1543498,1543555..1543938) /locus_tag="CAEBREN_12837" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45800.1" /db_xref="WormBase:CBN12837" /db_xref="WormBase:WBGene00151562" /translation="MCAAIEVPVKFKDEEKPSILREARIIKMCPVLKRALEVKNANWE TEGLKMEDPIELPITKEAGDFCFTYGDKYVQPDVEKDEPSLDQYKEANEKGLEELKLI LEAASFFEMSSFMHCLGFVTAKKLNDKPVEEIAKYIGVDCLPETPMFSEADGWIHAPN ELFQNN" assembly_gap 1545102..1545256 /estimated_length=155 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1546380..>1549877) /locus_tag="CAEBREN_12169" /db_xref="WormBase:WBGene00150894" mRNA complement(join(<1546380..1546556,1546614..1546780, 1546964..1547181,1547278..1547526,1547852..1548045, 1548148..1548650,1548786..1549002,1549051..1549131, 1549178..1549232,1549282..1549383,1549744..>1549877)) /locus_tag="CAEBREN_12169" /product="hypothetical protein" /db_xref="WormBase:CBN12169" /db_xref="WormBase:WBGene00150894" CDS complement(join(1546380..1546556,1546614..1546780, 1546964..1547181,1547278..1547526,1547852..1548045, 1548148..1548650,1548786..1549002,1549051..1549131, 1549178..1549232,1549282..1549383,1549744..1549877)) /locus_tag="CAEBREN_12169" /note="contains similarity to Interpro domain IPR006186 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45585.1" /db_xref="InterPro:IPR006186" /db_xref="WormBase:CBN12169" /db_xref="WormBase:WBGene00150894" /translation="MNFYMIYTLITFLPQFLDTRKPESESEKALRDLRCREFYVKIFN TATGSIEYSCQNYIAWGAEREIFCVEGKEMPYIIVYSAVNASIAITFYKICCQTKECL DRYPFNPFTRFGKNIPFEFEEKIPTDADYLDLVVRYLVVSVFFVGVSYTVVHICCVRR RVATQWDDEQNELDPELIAMAETPRMHIVKIGHRDDEGIPITGQHSFIDYCRLLAAYS FRDQNVKESNLIDPRLVATRILRHDLRLIREDRQPDVQYWNFMNNRVNPDERFVKILG KWVYISNRMDRDGFVDRQLPILERMAIQRYTDELKMNLKLRTKSRWEPKYTHLFDKWD IAHLMTLGSYKTDMHMIFFNSVGLGHELFQVTRPMGHVDHHNIFQAMFFHGPYFYPWD PSELIALFGEAREAFLEDPICLNLSLPIVIIGEIRGRYADLHRWLQITGLPYRRKLLF LGGYMERGSSSFEEYGIECLSFIAALKLAYPRHVFMLRGSAETTFSFAPRFCNAHMDV AVLAAARQMCNVLPLTALIEEDYLAVSSGIAPYMIEDLYGIAHLPRPIKPENVPTSVR WILFGQPNSMRGHFEHDRDAHTYRFGLRAVENLCRKYELKAVIRSRSELPLNPLIFND GKFVTISSTPTENSGVGVAMLIDENLGWIFFKLRYQTEELKLTPNHDEKMFNLREAES LKPKKKEKRKHDIYFD" gene 1549606..1549677 /locus_tag="CAEBREN_27562" /db_xref="WormBase:WBGene00188173" tRNA 1549606..1549677 /locus_tag="CAEBREN_27562" /product="tRNA-Pro" /db_xref="WormBase:CBN27562" /db_xref="WormBase:WBGene00188173" gene 1550122..1550194 /locus_tag="CAEBREN_26756" /pseudo /db_xref="WormBase:WBGene00187367" tRNA 1550122..1550194 /locus_tag="CAEBREN_26756" /product="tRNA-OTHER" /pseudo /db_xref="WormBase:CBN26756" /db_xref="WormBase:WBGene00187367" gene complement(<1550311..>1551473) /locus_tag="CAEBREN_14938" /db_xref="WormBase:WBGene00153663" mRNA complement(join(<1550311..1550661,1550710..1550916, 1551393..>1551473)) /locus_tag="CAEBREN_14938" /product="hypothetical protein" /db_xref="WormBase:CBN14938" /db_xref="WormBase:WBGene00153663" CDS complement(join(1550311..1550661,1550710..1550916, 1551393..1551473)) /locus_tag="CAEBREN_14938" /note="contains similarity to Pfam domain PF03134; contains similarity to Interpro domain IPR004345 (TB2/DP1/HVA22 related protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45650.1" /db_xref="InterPro:IPR004345" /db_xref="PFAM:PF03134" /db_xref="WormBase:CBN14938" /db_xref="WormBase:WBGene00153663" /translation="MSIKSTLKARNGVPSATSSGDGFQKLHNDFITYLYADHGAAYNE NVKKLEESFGQKREIFAYGLIGLSCVYMIIGSWAEFMCNLIGVAYPAYVSVKAIRTEG TDDDTVWLIYWTVFGAFSIIDFFAMGIMSYFPFYWVAKAAFLLYLYLPQTHGSYMIYH KIIDPLVAQMEKSISGKLPPGVGNMPPSARQVVGVDLNNNQVKLPSDQQPPQ" gene <1555338..>1559032 /locus_tag="CAEBREN_32510" /db_xref="WormBase:WBGene00194475" mRNA join(<1555338..1555369,1555715..1555793,1556178..1556317, 1556375..1556516,1557603..1557866,1558191..1558419, 1558626..1558880,1558959..>1559032) /locus_tag="CAEBREN_32510" /product="hypothetical protein" /db_xref="WormBase:CBN32510" /db_xref="WormBase:WBGene00194475" CDS join(1555338..1555369,1555715..1555793,1556178..1556317, 1556375..1556516,1557603..1557866,1558191..1558419, 1558626..1558880,1558959..1559032) /locus_tag="CAEBREN_32510" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR019775 (WD40 repeat, conserved site), IPR006594 (LisH dimerisation motif), IPR019781 (WD40 repeat, subgroup), IPR013720 (LisH dimerisation motif, subgroup), IPR001680 (WD40 repeat), IPR011042 (Six-bladed beta-propeller, TolB-like), IPR020472 (G-protein beta WD-40 repeat, region), IPR015943 (WD40/YVTN repeat-like-containing domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45619.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR006594" /db_xref="InterPro:IPR011042" /db_xref="InterPro:IPR013720" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR019775" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR020472" /db_xref="WormBase:CBN32510" /db_xref="WormBase:WBGene00194475" /translation="MSLSERQKEEINRAIAEYMQNNGYKDSFDTFLKEASLSENDIKP LGGILEKKWTTVLRLQRKVNDLEAKLTESQREINHGAPTRDKRQASDWIPRPPETQKL IGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLEKTLKGHTDAVNDIAIDAAG KQLVSCSSDLSIKLWDFGQTYECLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTVKQW DISTGYCVFTFRGHNDWVRQIRISNDGTLFASASLDQTVTVWSFATKAAKLVLRNHEH AVECVEWAPDSAYTNITGQQPEGNSTHILFSGSRDRSIKAWNISNGDVIFTLLAHENW VRGLAFHPKGKYLISVADDKTLRVWELSQQRCMKTIDAHEHFVSTVAFHPSHPYVITG SVDHSCKVWECR" assembly_gap 1556860..1556869 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1559871..>1560496 /locus_tag="CAEBREN_28202" /db_xref="WormBase:WBGene00190167" mRNA join(<1559871..1559966,1560011..1560092,1560333..>1560496) /locus_tag="CAEBREN_28202" /product="hypothetical protein" /db_xref="WormBase:CBN28202" /db_xref="WormBase:WBGene00190167" CDS join(1559871..1559966,1560011..1560092,1560333..1560496) /locus_tag="CAEBREN_28202" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45614.1" /db_xref="WormBase:CBN28202" /db_xref="WormBase:WBGene00190167" /translation="MFRHLDIGNVPDRQTTIRKISEHKDRQTQRKNKTDFMFYSNQKN QSYKTYTVRSCSYETGCKWDRSKACRKNALEYAGKGCADKYCCGKDKCNGSQGWAATM GSLVVLMIFIF" gene complement(<1561130..>1562420) /locus_tag="CAEBREN_22183" /db_xref="WormBase:WBGene00160908" mRNA complement(join(<1561130..1561495,1561619..1562103, 1562153..>1562420)) /locus_tag="CAEBREN_22183" /product="hypothetical protein" /db_xref="WormBase:CBN22183" /db_xref="WormBase:WBGene00160908" CDS complement(join(1561130..1561495,1561619..1562103, 1562153..1562420)) /locus_tag="CAEBREN_22183" /note="contains similarity to Pfam domain PF12150; contains similarity to Interpro domain IPR021010 (Cytosolic motility protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45842.1" /db_xref="InterPro:IPR021010" /db_xref="PFAM:PF12150" /db_xref="WormBase:CBN22183" /db_xref="WormBase:WBGene00160908" /translation="MPNPPPKEDTWAFQPIGAPFPPSPVKCMGEQNMYVALWYKHGKP IHGRSWNNGGVVECSFPYKEAELTTKAQLEGQIQVLQYVGDHNSQGFWYEWIKYKERI EKLDDKHQLVRCGDSFPIFWKRPEGNLLGYVDNKTEDAWFSFNGKVIKQTGPQLNDMY IITRNCVGGPPHCPCAVCGAAPPPPKPVPRVERDEWMDIREGDAWPTNRQLVRALDKS LDTLPGVAADQYVALWYMQGEPVMGRVWNEGGKIAANFSWFNNEYCKNVGSIQLLVHL PDSVRGFDYGWIPFPEAAKFGDKQWHPVHVNNHKGDISVGVVNVSGGKQILAKVDVRN EKYGYGYQGKEHSASAKACADNTIVLCRKAKPGYKLDG" gene 1563980..1564051 /locus_tag="CAEBREN_27372" /db_xref="WormBase:WBGene00187983" tRNA 1563980..1564051 /locus_tag="CAEBREN_27372" /product="tRNA-Pro" /db_xref="WormBase:CBN27372" /db_xref="WormBase:WBGene00187983" gene complement(<1564129..>1565876) /locus_tag="CAEBREN_04059" /db_xref="WormBase:WBGene00142784" mRNA complement(join(<1564129..1564394,1564447..1564682, 1564859..1564998,1565042..1565196,1565477..1565595, 1565646..1565746,1565826..>1565876)) /locus_tag="CAEBREN_04059" /product="hypothetical protein" /db_xref="WormBase:CBN04059" /db_xref="WormBase:WBGene00142784" CDS complement(join(1564129..1564394,1564447..1564682, 1564859..1564998,1565042..1565196,1565477..1565595, 1565646..1565746,1565826..1565876)) /locus_tag="CAEBREN_04059" /note="contains similarity to Interpro domain IPR018228 (Deoxyribonuclease, TatD-related, conserved site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45703.1" /db_xref="InterPro:IPR018228" /db_xref="WormBase:CBN04059" /db_xref="WormBase:WBGene00142784" /translation="MRAEPDLLNLPNEVLLQVFRRLPRHDIFFGVAHVNHRFRELVHK NLKTIRLFDAHCHVNIVDNRPLTKYREDGTDPIITYSFTLFDRRLPEFTQKRRLCLRG NDNRYKELHVSHFNDSAMQAQFERIGIGHDVAILPVTARTLLSYMNLQAIRFQVRKQC KPESMRIEDDFFADCLQFLEKACCRVEIKSLLLCSKNILFPWQLGQKSLQKLSNLQSL QNFILENMTTFDPFSSFLKLPTRNLASLQFRLDPRHRMELDQVQMSPINGSLLKLLST SAVYRLDFSAYSEVSQIVTSIDAVDMCYFIEVPARNPQKIERKIQTWHYSPKPWIIKG ISFNSTVTIDDFRVAVYKILP" gene 1565345..1565426 /locus_tag="CAEBREN_26679" /db_xref="WormBase:WBGene00187290" tRNA 1565345..1565426 /locus_tag="CAEBREN_26679" /product="tRNA-Ser" /db_xref="WormBase:CBN26679" /db_xref="WormBase:WBGene00187290" gene <1571403..>1571853 /locus_tag="CAEBREN_20160" /db_xref="WormBase:WBGene00158885" mRNA join(<1571403..1571546,1571590..>1571853) /locus_tag="CAEBREN_20160" /product="hypothetical protein" /db_xref="WormBase:CBN20160" /db_xref="WormBase:WBGene00158885" CDS join(1571403..1571546,1571590..1571853) /locus_tag="CAEBREN_20160" /note="contains similarity to Pfam domain PF00412; contains similarity to Interpro domain IPR001781 (Zinc finger, LIM-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45533.1" /db_xref="InterPro:IPR001781" /db_xref="PFAM:PF00412" /db_xref="WormBase:CBN20160" /db_xref="WormBase:WBGene00158885" /translation="MDRSIDRRQCGHCHQSIGNEALVAMNRLWHPDHFTCSSCKRPIK QTFQAADNHAYCVQCFAQKYNPKCAGCMETLVDTCLLALDRHWHPRCFTCTSCNRPLP NGEFYLVDDKPYDLDCHWAKRLEKREHMERGER" gene complement(1573246..1573317) /locus_tag="CAEBREN_27086" /db_xref="WormBase:WBGene00187697" tRNA complement(1573246..1573317) /locus_tag="CAEBREN_27086" /product="tRNA-Thr" /db_xref="WormBase:CBN27086" /db_xref="WormBase:WBGene00187697" gene <1575090..>1576657 /gene="Cbn-nas-1" /locus_tag="CAEBREN_23092" /db_xref="WormBase:WBGene00161817" mRNA join(<1575090..1575378,1575524..1575644,1576013..1576116, 1576258..1576329,1576380..1576513,1576562..>1576657) /gene="Cbn-nas-1" /locus_tag="CAEBREN_23092" /product="CBN-NAS-1 protein" /db_xref="WormBase:WBGene00161817" CDS join(1575090..1575378,1575524..1575644,1576013..1576116, 1576258..1576329,1576380..1576513,1576562..1576657) /gene="Cbn-nas-1" /locus_tag="CAEBREN_23092" /note="contains similarity to Pfam domain PF01400; contains similarity to Interpro domains IPR001506 (Peptidase M12A, astacin), IPR006026 (Peptidase, metallopeptidase)" /codon_start=1 /product="CBN-NAS-1 protein" /protein_id="EGT45807.1" /db_xref="InterPro:IPR001506" /db_xref="InterPro:IPR006026" /db_xref="PFAM:PF01400" /db_xref="WormBase:CBN23092" /db_xref="WormBase:WBGene00161817" /translation="MLPIVLFLLLSTPLALCQAPFWMPNMEQFSFLTDTDFRNALLLP TTNTRRVRSLYHDMRIPMQLYQRFKRGGGVAVAAEKDKWPNGRVPYILSAAYTSAQRA VLARAFDAYAKRTCIRFVPKSPTDKDYIVIQKLDGCYADFSRVGGRQQVSLADECIDY ATIIHELMHVIGFIHEHQREDRDSYVSILYQNVIQGANTDFDKLTNLGLSYYGEHYDY SSIMHYEANEGSRNGKNTIEAKNAHFTSIMGKANDFSTSDLRRVNRAYKCSIF" gene 1576930..1577001 /locus_tag="CAEBREN_26707" /db_xref="WormBase:WBGene00187318" tRNA 1576930..1577001 /locus_tag="CAEBREN_26707" /product="tRNA-Thr" /db_xref="WormBase:CBN26707" /db_xref="WormBase:WBGene00187318" gene <1577554..>1587134 /locus_tag="CAEBREN_26050" /db_xref="WormBase:WBGene00164775" mRNA join(<1577554..1577625,1579280..1579552,1579755..1579911, 1580057..1580291,1580356..1580441,1580616..1580708, 1580753..1580856,1580917..1581055,1581101..1581219, 1581373..1581525,1581574..1581744,1582118..1582454, 1582500..1582623,1582800..1582998,1583049..1583126, 1583208..1583315,1584079..1584158,1584204..1584362, 1584674..1584998,1585243..1585396,1585722..1585815, 1586227..1586608,1587027..>1587134) /locus_tag="CAEBREN_26050" /product="hypothetical protein" /db_xref="WormBase:CBN26050" /db_xref="WormBase:WBGene00164775" CDS join(1577554..1577625,1579280..1579552,1579755..1579911, 1580057..1580291,1580356..1580441,1580616..1580708, 1580753..1580856,1580917..1581055,1581101..1581219, 1581373..1581525,1581574..1581744,1582118..1582454, 1582500..1582623,1582800..1582998,1583049..1583126, 1583208..1583315,1584079..1584158,1584204..1584362, 1584674..1584998,1585243..1585396,1585722..1585815, 1586227..1586608,1587027..1587134) /locus_tag="CAEBREN_26050" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR004009 (Myosin, N-terminal, SH3-like), IPR003006 (Immunoglobulin/major histocompatibility complex, conserved site), IPR002928 (Myosin tail), IPR001609 (Myosin head, motor domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45609.1" /db_xref="InterPro:IPR001609" /db_xref="InterPro:IPR002928" /db_xref="InterPro:IPR003006" /db_xref="InterPro:IPR004009" /db_xref="WormBase:CBN26050" /db_xref="WormBase:WBGene00164775" /translation="MATIDYMMDPGWKYLRQAQDEALKEQAARRFDNKTHAWVPDPAE GFVAGAIAVQEGDNLTIGMPDGTQRKTTRAEVQEINPAKFEKTEDMSNLTFLNEASVL HNLRQRYYSMMIYTYSGLFCVFINPYKMLPIYTDSVASMYVNKRRAEMPPHLFAVSDE AFRNMMSDKENQSMLITGESGAGKTENTKKVIAYFAMIGSGNKDQKSVSYRYLFFSNS DFQESSLENQVVQANPAIEAFGNGATTRNYNSSRYGKFIRIHFDRKGRLVGGDIEHYL LEKSRVIKQAPGERSYHIFYQIMTQKGLRERYGLSDNIRDYKFVSQAEITVPGMNDTE EWGITDTAFNVMGFSDREKDDLYKLCSAIMHIGNSTFKQKPRDEQAEVDDMKSPTAAC KLFGIDTDQFLNALTRPRIKVGMEWVNKGQNVQQVDWAVGALSKAIYARMFNWLIKRV NKTLQANANDMVYYIGVLDIAGFEIFDRNSFEQLWINFVNEKLQQFFNHHMFVLEQEE YQREGIEWTFIDFGLDLQSCIELIERPLGIVSMLDEECIVPKATDMTYVDKLLTQHLG KHPNFQKAKPPKGKQADAHFSIVHYAGTVRYNAEQWLDKNKDPLNDSAVAILKTSDKE GVLYQLWEEYQTDVDREENEKRGKTSQAKKKGKSASFLTVSTMYRESLTSLMTMLHTT HPHFIRCIIPNEKKTSGLIDAPLVLNQLTCNGVLEGIRICRKGFPNRMMFADFRFRYA ILAADEASEKDAAKASKAMLRKLSKNNQLNVDTFKVGTTKVFFRAGMLARLEELRDEA LSEVILKFQCSARHYLAQVEYKRRLDREDAYPIIQENVRAWIKLRSWPWYRLFSRLKP MLKGMKSNAEIEALEKKCKELEENHKREEEARKKYADELRAKIEQYEETKAALERDRM LLDKRNKEIEELNRNLKSESEANYENAKKAAELEKLREKERKEWDEKERRMQMEAENE ANQHKTQTEKLKDQIATMQTDYEKLSAQRKAQEQMNAELVDEVAAFKNKAERAEEQKK KLVEDLDALDDKLAAEKRANNEHVKHNKKLESQLKATQTQLTLALKEKHENDVDCKRR ESEIGELKLKAQGDANLISKLQAMLRKCLTKIEELEEDLLEERKLRMKAERQFNELRS EYDILTEQMAEASGQLTAEAHINKVRAEELSNLRRDLQKRNLNHEAYISDLCSMQYAT VNNLRNLSQQSSALETEALRILDHRRAISKQPLPRVYVEEQSDSE" gene complement(<1587621..>1591174) /locus_tag="CAEBREN_11169" /db_xref="WormBase:WBGene00149894" mRNA complement(join(<1587621..1587834,1588141..1588670, 1588970..1589116,1589385..1589474,1589716..1589823, 1590932..>1591174)) /locus_tag="CAEBREN_11169" /product="hypothetical protein" /db_xref="WormBase:CBN11169" /db_xref="WormBase:WBGene00149894" CDS complement(join(1587621..1587834,1588141..1588670, 1588970..1589116,1589385..1589474,1589716..1589823, 1590932..1591174)) /locus_tag="CAEBREN_11169" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45553.1" /db_xref="WormBase:CBN11169" /db_xref="WormBase:WBGene00149894" /translation="MPRNRRKLSKKARKAVYLANLQGNGDRTRALAREEFRKRLLKMQ QEKEKSIEVISEDSALPTTSSASETPQLNAKNSIPSQTKATTPPTAVTAKEPSTSSPP KVPESKLVATPSQQQVKTAIPKPPTTVKKLTLEELEAKRVPVPYEQFHDKHEQFFRNR REKKAAEEEARLAMEPKKIPLTGKALEDNRTPTPWSGREQRMRLLPDRLSPDSAAERE RAKEAQRAHEALEKAKKLAAAKKRALPKSPPPPPEEEEEEPVYHRRAPPPSSRTQLNH QAEHWKAKFLDMESEVLRLREKTKQQAIEVQAREKDSRDMAMWRQRYAHLEDYCRVVK GESMNLRKDLSDMRKELENKDRECHELRMELLYVRNNSLIRDNSSSPEPTPKQKKPRA PRKPREPKEPRQPRQPRDQSTQKPRAPRKRKQQGSPAPMLRPISPSTIDLE" gene <1591427..>1594156 /locus_tag="CAEBREN_02863" /db_xref="WormBase:WBGene00141588" mRNA join(<1591427..1591474,1591524..1591733,1591988..1592428, 1592576..1592860,1593095..1593897,1593952..>1594156) /locus_tag="CAEBREN_02863" /product="hypothetical protein" /db_xref="WormBase:CBN02863" /db_xref="WormBase:WBGene00141588" CDS join(1591427..1591474,1591524..1591733,1591988..1592428, 1592576..1592860,1593095..1593897,1593952..1594156) /locus_tag="CAEBREN_02863" /note="contains similarity to Pfam domain PF00867; contains similarity to Interpro domains IPR006084 (DNA repair protein (XPGC)/yeast Rad), IPR006086 (XPG/RAD2 endonuclease), IPR006085 (XPG N-terminal), IPR008918 (Helix-hairpin-helix motif, class 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45662.1" /db_xref="InterPro:IPR006084" /db_xref="InterPro:IPR006085" /db_xref="InterPro:IPR006086" /db_xref="InterPro:IPR008918" /db_xref="PFAM:PF00867" /db_xref="WormBase:CBN02863" /db_xref="WormBase:WBGene00141588" /translation="MGITGLLPFVKNACRKGNILELRGKSVAIDVSCLLHRGLTGCMD KIHMGEETQSYVTYVNRYVKELLDMGCHVVMVFDGRPLPAKKGTNDDRREQREKRKEH AEMLLAKGLEREARDHYRLATSISAEIVSKTIQHFRGTPNVDIVVAPYEADAQLAYLM ESKLVDSVITEDSDLIVFGCEMIYFKWQAATGECSVYEKCNLKKCFTGELGGDKFDFV KFRRICILAGCDYLQSGLPGVGISTAAKFFSLTSIKDLRTVLKKVPYYLKNPKLKEHV TEDFIRNFERAENTFKHQIVFDPRERCQKPLTPYPLDRIGGVDDDLEILDLESPKNCP DATTIASHFTYAGTTVSQRIAIRLALGNPSDGNAIDDKFLLIHPTPEWSVWALKYESK GHILAVAQKKKDLEATQCGGAFKLDSPAVTRRLKAQKEKVEEEDDIVKQFMEDIEKEK QALKKRKNAPETDYNAEILMKKYSEPPKKPKLMVDDDFSEFFPVKTTEKNDKSTASSK KSIEISNKTTKNSENSTENAGKTALDPAKSMEIKPPPILRKSTSTPESSARKFQKFQS PLLSHQNSAPLEEISTEKSKYFGKKLSENGPAKPTKNPFRCPAFVKPTPVTVEIEEKS KKTTILAALEDNIQESISTNVNYRFVGFKSAGLRRKSKN" gene <1594374..>1596239 /locus_tag="CAEBREN_03347" /db_xref="WormBase:WBGene00142072" mRNA join(<1594374..1594448,1594497..1594595,1594793..1594969, 1595375..1595701,1595959..1596042,1596138..>1596239) /locus_tag="CAEBREN_03347" /product="hypothetical protein" /db_xref="WormBase:CBN03347" /db_xref="WormBase:WBGene00142072" CDS join(1594374..1594448,1594497..1594595,1594793..1594969, 1595375..1595701,1595959..1596042,1596138..1596239) /locus_tag="CAEBREN_03347" /note="contains similarity to Interpro domains IPR011990 (Tetratricopeptide-like helical), IPR006822 (Coatomer, epsilon subunit)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45689.1" /db_xref="InterPro:IPR006822" /db_xref="InterPro:IPR011990" /db_xref="WormBase:CBN03347" /db_xref="WormBase:WBGene00142072" /translation="MADKLFSIRNYFLLGSYQSCIGEALKFQTKSEEEKQEKDVYLYR AYIAQGQAFIPLKEIPATSKSADLAAVRRYAEFSNNPAAKKKIIAEVQEDVASRNIKS EMAAVLAATILNEANLTQDAFRAVSRFEGLEARATKVFTLIKMNKRKLAMAEVKRMNQ IDEDATLSQLANALVTAFGACGKVKDALYIYNEMADKYGRTTDLEMHQAVVSILTKDY DAAEELLESALERDSKDADVLINSLVAAQLNDKDDEVVERLISQLKQHKEHPWVVDYN NKEAEFDKIAF" gene complement(<1596377..>1597491) /locus_tag="CAEBREN_22230" /db_xref="WormBase:WBGene00160955" mRNA complement(join(<1596377..1596597,1596817..1597008, 1597082..1597220,1597423..>1597491)) /locus_tag="CAEBREN_22230" /product="hypothetical protein" /db_xref="WormBase:CBN22230" /db_xref="WormBase:WBGene00160955" CDS complement(join(1596377..1596597,1596817..1597008, 1597082..1597220,1597423..1597491)) /locus_tag="CAEBREN_22230" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002223 (Proteinase inhibitor I2, Kunitz metazoa), IPR006149 (EB domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45778.1" /db_xref="InterPro:IPR002223" /db_xref="InterPro:IPR006149" /db_xref="WormBase:CBN22230" /db_xref="WormBase:WBGene00160955" /translation="MKSSFSSLFILLMLQLTAVVFCEKCLSNEECDAKWPDAICIKGR CRCPENTIRKKSASREFVCLSTNDATGNSGPPLTCPTPEGAGYQVMFRKDGEPMKCSS KKKPDTCPEGYECIQGLSILGALDGVCCPDRAKTCTHPIFDHPDDGYLPRWGFDGDQC IEFKWNPERPSSANNFKSRAHCEDYCIGSSSINGVLNYQQTNFHLF" gene <1599025..>1599877 /locus_tag="CAEBREN_22833" /db_xref="WormBase:WBGene00161558" mRNA join(<1599025..1599144,1599497..>1599877) /locus_tag="CAEBREN_22833" /product="hypothetical protein" /db_xref="WormBase:CBN22833" /db_xref="WormBase:WBGene00161558" CDS join(1599025..1599144,1599497..1599877) /locus_tag="CAEBREN_22833" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45805.1" /db_xref="WormBase:CBN22833" /db_xref="WormBase:WBGene00161558" /translation="MANTCEIPLLFKDDDAEPAILRDTGLIKLIPTIVRAVELKNPNW ETENVVVTSPISIPFPRWVGDFVFEHIRKYESPQGSVEGDIKNYPEAAQKTIVELKQI IGLADFLECTSFMHCIGFVIADKLSPKHVNEIAAYLGVEMEPEENLENREDGWVYPPS SIFENN" gene <1600642..>1604207 /locus_tag="CAEBREN_31542" /db_xref="WormBase:WBGene00193507" mRNA join(<1600642..1600790,1600938..1601013,1601490..1601801, 1601904..1601979,1602037..1602122,1602178..1602246, 1603252..1603471,1603532..1603638,1603712..1603870, 1604019..>1604207) /locus_tag="CAEBREN_31542" /product="hypothetical protein" /db_xref="WormBase:CBN31542" /db_xref="WormBase:WBGene00193507" CDS join(1600642..1600790,1600938..1601013,1601490..1601801, 1601904..1601979,1602037..1602122,1602178..1602246, 1603252..1603471,1603532..1603638,1603712..1603870, 1604019..1604207) /locus_tag="CAEBREN_31542" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002083 (MATH), IPR001841 (Zinc finger, RING-type), IPR013322 (TRAF-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45621.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR002083" /db_xref="InterPro:IPR013322" /db_xref="WormBase:CBN31542" /db_xref="WormBase:WBGene00193507" /translation="MTTTNTQSVMFKGGLPADCTCPICEQALREPIRLNCDHHYCRQC FEKADRAPECAQCQTIIQPELCQHDRAKHKQILALPVVCTFESSGCDWSGQLGFLHDH LSECAFKSSSKCEKCGRQFAKADLDRHREKCELNRAVCSYCNKTIRDSDLERHLKTCP DVVISCPFQCGLSDRPRHEIEAHRPLCPNVDNVCPFVPYGCTFAGGKETIQQHISDEP VRHMMFICDEITDLKETYNVMDRDMASFNDRQTRILGAADTCTEMFGPQLIWRIDKLQ QRTNEAKVCRSARHPHFKNLQSGANTTIFSAPFMTHRFGYKMMACACLFGDGSSAGKS ISLYVLLLKGEFDPTLEWPFNRTIKISLLDQQPRPEERVNISYVIDPRKLKANEKFLA RPRGERNAAFGSQSFCSLAILQNYVKDDTIYVRIDVERCETLPVSLQTRDAKDRKRMM DQLRLKTPDVRMHQVRPVTGQSMDVKDLMV" assembly_gap 1602475..1602484 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1602766..1602775 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1604548..>1605672 /locus_tag="CAEBREN_22729" /db_xref="WormBase:WBGene00161454" mRNA join(<1604548..1604706,1604883..1605198,1605395..1605472, 1605530..>1605672) /locus_tag="CAEBREN_22729" /product="hypothetical protein" /db_xref="WormBase:CBN22729" /db_xref="WormBase:WBGene00161454" CDS join(1604548..1604706,1604883..1605198,1605395..1605472, 1605530..1605672) /locus_tag="CAEBREN_22729" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45600.1" /db_xref="WormBase:CBN22729" /db_xref="WormBase:WBGene00161454" /translation="MIVLTFSLRLLVFLTLSSAVLCECDDNGVIYANGDKWIRNNHFL VTCRNGKIQTLKCVTDSGHLLDVGSKTYVEQGYEYTCAHEQAETLNTNTCPTFADFSD DIFKDRFAICCISRRFKGCVDVNGDIVKDGFFIIGNQSLKYCRIQPNQLMARIEPKGC FNGTTNDDIHDESLHIKKYAVWREGDIEYRCGDDGVHIQRCFPKELKNKAVWAGTAWI QDDGQVKTCGKIH" gene complement(<1605790..>1607262) /locus_tag="CAEBREN_16668" /db_xref="WormBase:WBGene00155393" mRNA complement(join(<1605790..1606092,1606253..1606447, 1606510..1606592,1607040..>1607262)) /locus_tag="CAEBREN_16668" /product="hypothetical protein" /db_xref="WormBase:CBN16668" /db_xref="WormBase:WBGene00155393" CDS complement(join(1605790..1606092,1606253..1606447, 1606510..1606592,1607040..1607262)) /locus_tag="CAEBREN_16668" /note="contains similarity to Pfam domain PF01182; contains similarity to Interpro domains IPR006148 (Glucosamine/galactosamine-6-phosphate isomerase), IPR004547 (Glucosamine-6-phosphate isomerase), IPR018321 (Glucosamine-6-phosphate isomerase, conserved site), IPR018322 (Glucosamine-6-phosphate isomerase, subgroup)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45767.1" /db_xref="InterPro:IPR004547" /db_xref="InterPro:IPR006148" /db_xref="InterPro:IPR018321" /db_xref="InterPro:IPR018322" /db_xref="PFAM:PF01182" /db_xref="WormBase:CBN16668" /db_xref="WormBase:WBGene00155393" /translation="MKLIIEENADCVADFAARYVARKIAEATDRDKFFVLGLPTGSTP LGMYKRLIEFYNSGVISFRKVKTFNMDEYVGLPRDHPESYHSFMFDNFFRHIDIDPKN VHILDGNTSNHEKECAEYEAKILEAGGIDLFIGGIGPDGHIAFNEPGSSLASRTRIKT LNEDTIQANARFFGGDLSKVPTQALTVGVQTVMDAREVMILITGSHKALALHQAIECG ISHMCTVSAMQMHKCATFVADEDATLELKVKTVKYFKGLMALHRKLVEF" gene complement(1606702..1606773) /locus_tag="CAEBREN_27024" /db_xref="WormBase:WBGene00187635" tRNA complement(1606702..1606773) /locus_tag="CAEBREN_27024" /product="tRNA-Pro" /db_xref="WormBase:CBN27024" /db_xref="WormBase:WBGene00187635" gene <1609405..>1610097 /locus_tag="CAEBREN_24217" /db_xref="WormBase:WBGene00162942" mRNA join(<1609405..1609441,1609492..1609586,1609634..1609801, 1609993..>1610097) /locus_tag="CAEBREN_24217" /product="hypothetical protein" /db_xref="WormBase:CBN24217" /db_xref="WormBase:WBGene00162942" CDS join(1609405..1609441,1609492..1609586,1609634..1609801, 1609993..1610097) /locus_tag="CAEBREN_24217" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45850.1" /db_xref="WormBase:CBN24217" /db_xref="WormBase:WBGene00162942" /translation="MPMDTTIEETDNPAVHERVTRLAATDMIFDPRKVSYMGNVDNEK DPEEEKQFEKELNAACEKHEARFKDIRKLEERNPNYRRPKSTESEKSHAPVPPDQRIK MRPDQCVLFETKDLMTEEDEDLVNDDNTNKAS" gene <1611323..>1614057 /gene="Cbn-kin-21" /locus_tag="CAEBREN_09656" /db_xref="WormBase:WBGene00148381" mRNA join(<1611323..1611523,1612080..1612574,1612621..1612737, 1612802..1613257,1613349..1613477,1613791..>1614057) /gene="Cbn-kin-21" /locus_tag="CAEBREN_09656" /product="CBN-KIN-21 protein" /db_xref="WormBase:WBGene00148381" CDS join(1611323..1611523,1612080..1612574,1612621..1612737, 1612802..1613257,1613349..1613477,1613791..1614057) /gene="Cbn-kin-21" /locus_tag="CAEBREN_09656" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine-protein kinase domain), IPR020685 (Tyrosine-protein kinase), IPR001245 (Serine-threonine/tyrosine-protein kinase), IPR017442 (Serine/threonine-protein kinase-like domain), IPR000980 (SH2 motif), IPR008266 (Tyrosine-protein kinase, active site), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /codon_start=1 /product="CBN-KIN-21 protein" /protein_id="EGT45550.1" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008266" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="InterPro:IPR020685" /db_xref="WormBase:CBN09656" /db_xref="WormBase:WBGene00148381" /translation="MPKKDQNSCQTAEAIIGKRESNTNLNVDGLIPIDGAGGTAEGGN TTDLERSGSFPDLQHNGLVTSDDEYVRNWLLQYAWYHGVMFGRVAEKLLIWENAWLVR RCVLKSSRFLCVSANVDGKVTHFPLNVNVEGWCCARLLEKYPQLTGKRFPHIWQLLDA WSLCTNYIVPVPRPSTVLMHSAITLENALGRGSFGEVFKAKYMAKGATEAIEVAAKRL IGDAKRPQLQDFCNEASVMALLDHRNVVAFYGFAPLQTPLILVMELVPGGDLKKYLKN TPGIPNKQIVLFALDISSGMNHLASRKVIHRDLAARNCLITKDLRVKISDFGLSVNET EVTVKNLRKAPIRWLAPETLTKGIFNQKTDVWAYGVLVTELMIRCAHDPLHPRDLKNV AKWIKDSDHPHRIEDGEPRELAEIVDACCEKSISSRLDFQAVKKRVAKIHQKMADLEL AHALSPNPNPATNIEKKKSEDRKSNTDRRSNTSTDRRASNTTLTRKKSRDQTKRKERT NERKSKGSSGGMPGDKGKVKLVSNRRKEKNQPMQVPAGMSPNPSAR" gene complement(<1614801..>1615488) /locus_tag="CAEBREN_19452" /db_xref="WormBase:WBGene00158177" mRNA complement(join(<1614801..1614905,1614994..1615220, 1615398..>1615488)) /locus_tag="CAEBREN_19452" /product="hypothetical protein" /db_xref="WormBase:CBN19452" /db_xref="WormBase:WBGene00158177" CDS complement(join(1614801..1614905,1614994..1615220, 1615398..1615488)) /locus_tag="CAEBREN_19452" /note="contains similarity to Interpro domain IPR005341 (Protein Transporter, Pam16)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45821.1" /db_xref="InterPro:IPR005341" /db_xref="WormBase:CBN19452" /db_xref="WormBase:WBGene00158177" /translation="MPWRAALKMALAAGEALTKALTKAVREEIKQTQQAAARHAAATG QTASETKENANANAKLGISLEESLQILNVKTPLRREDVEKQYEHLFAINDKAKGGTFY LQSKVFRAKERIDEELGRLDQKSEATAEQKKEDPPKNE" gene complement(<1615641..>1616861) /locus_tag="CAEBREN_04616" /db_xref="WormBase:WBGene00143341" mRNA complement(join(<1615641..1615775,1615822..1616076, 1616382..1616598,1616773..>1616861)) /locus_tag="CAEBREN_04616" /product="hypothetical protein" /db_xref="WormBase:CBN04616" /db_xref="WormBase:WBGene00143341" CDS complement(join(1615641..1615775,1615822..1616076, 1616382..1616598,1616773..1616861)) /locus_tag="CAEBREN_04616" /note="contains similarity to Pfam domain PF01728; contains similarity to Interpro domains IPR015507 (Ribosomal RNA methyltransferase J), IPR002877 (Ribosomal RNA methyltransferase RrmJ/FtsJ)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45546.1" /db_xref="InterPro:IPR002877" /db_xref="InterPro:IPR015507" /db_xref="PFAM:PF01728" /db_xref="WormBase:CBN04616" /db_xref="WormBase:WBGene00143341" /translation="MLKNYRFFGGFLTKNSRRFSTKKAKGNLNRYIQRQSTDEFTVRA REHNFRARSAFKLMEIDEKFKFLKPESTVIDIGCAPGSWLQVVVDRCPNGYVMGVDLQ NVLPIRGADILSLSDITSPEVQSKIREKLAKRGSVDVVLSDMAPNPTGDNATDHLRLI ELCRTVFRLFTEEKAFELSKNGVFLCKIWDGSARGEFIRELSNRFSTVKTVKPTACRD NSAELYLFCRNFK" gene complement(<1617038..>1618372) /locus_tag="CAEBREN_10214" /db_xref="WormBase:WBGene00148939" mRNA complement(join(<1617038..1617112,1617742..1617909, 1618084..1618240,1618290..>1618372)) /locus_tag="CAEBREN_10214" /product="hypothetical protein" /db_xref="WormBase:CBN10214" /db_xref="WormBase:WBGene00148939" CDS complement(join(1617038..1617112,1617742..1617909, 1618084..1618240,1618290..1618372)) /locus_tag="CAEBREN_10214" /note="contains similarity to Pfam domain PF01883; contains similarity to Interpro domain IPR002744 (Protein of unknown function DUF59)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45723.1" /db_xref="InterPro:IPR002744" /db_xref="PFAM:PF01883" /db_xref="WormBase:CBN10214" /db_xref="WormBase:WBGene00148939" /translation="MGQERLDNANPILFDSKPRHRPVTGTERDESVEDPIDSWEIFDL IRDINDPEHPYTLEQLNVVQEELIKVFIDDEETFVKVNFTPTIPHCSMATLIGLAIRV KLLRCLHPKVKVSVSITPGSHSTEESINRQLADKERVAAAMENQGLMHAVNECLRVPE " gene 1619181..1619253 /locus_tag="CAEBREN_27555" /db_xref="WormBase:WBGene00188166" tRNA 1619181..1619253 /locus_tag="CAEBREN_27555" /product="tRNA-Val" /db_xref="WormBase:CBN27555" /db_xref="WormBase:WBGene00188166" gene 1620071..1620142 /locus_tag="CAEBREN_27669" /db_xref="WormBase:WBGene00188280" tRNA 1620071..1620142 /locus_tag="CAEBREN_27669" /product="tRNA-Thr" /db_xref="WormBase:CBN27669" /db_xref="WormBase:WBGene00188280" gene <1620174..>1623798 /locus_tag="CAEBREN_12374" /db_xref="WormBase:WBGene00151099" mRNA join(<1620174..1620301,1620358..1620484,1620528..1620660, 1621026..1621186,1621802..1622230,1622275..1622438, 1622577..1622739,1622791..1622950,1623001..1623140, 1623206..1623377,1623593..1623731,1623777..>1623798) /locus_tag="CAEBREN_12374" /product="hypothetical protein" /db_xref="WormBase:CBN12374" /db_xref="WormBase:WBGene00151099" CDS join(1620174..1620301,1620358..1620484,1620528..1620660, 1621026..1621186,1621802..1622230,1622275..1622438, 1622577..1622739,1622791..1622950,1623001..1623140, 1623206..1623377,1623593..1623731,1623777..1623798) /locus_tag="CAEBREN_12374" /note="contains similarity to Pfam domain PF00024; contains similarity to Interpro domains IPR003609 (Apple-like), IPR003014 (PAN-1 domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45731.1" /db_xref="InterPro:IPR003014" /db_xref="InterPro:IPR003609" /db_xref="PFAM:PF00024" /db_xref="WormBase:CBN12374" /db_xref="WormBase:WBGene00151099" /translation="MTRISIILIVFGILYTANASNLIEDITDKEDAVNDDDDDHLQTF PTPPPIGTTTSTGDALFNRMNEILRKENAQKSQNFQIFNEKDLVTNSNTNPYFSTTRK PKNRSDSSQKSRDPDPHSQVIAGIPDLSDPCFRRYENSIIVNAQPYERRSSTGLMHCK SHCLNSQIGVYSCRSFVYDNVNRVCDLFAHVGDQAPARLLKFQTRDYFEPTDIVNCLN LVNGVPSSSESTDSDDSDSDSAPAPPPPVIALATNTDKRDEVEDTTTLPPSKTITSES VDSKSRDDSCPRGKQSTFLRTEGFELFKHDEQEMAVEDVAECAKACIENKVNGVHLTC KSFDYLTSSSTCAFTSEAAVPVGNGQLKQRDDASYHEKICVSKSFVESCPSTFFSRHP QMILVGFAESVSDSPSFEHCFDTCINSYQLFGFNCTSGMYYFEENQLNCILNSENRIT QSELFTEENTDIVDYFEVECTKPRGAGAKRRMSGVRNFETDAIGAEKMLANHHEDNVE DDGSKWESWSECQDGKQTRRKSCANFNKIEDCAEEVRDCVTSEEETLEPSSGMKMSIR RSGDLEENIEAKNKAGGNDENEAEIEDPVPTKEEIAEVKQKIRRTGFKCPLNECCRVF LSCSYGLRHNSHTKQRSRLLR" gene complement(<1624023..>1626743) /locus_tag="CAEBREN_24477" /db_xref="WormBase:WBGene00163202" mRNA complement(join(<1624023..1624161,1624252..1624543, 1624818..1625022,1625067..1625393,1625692..1625794, 1625836..1626005,1626054..1626232,1626284..1626352, 1626399..1626486,1626540..>1626743)) /locus_tag="CAEBREN_24477" /product="hypothetical protein" /db_xref="WormBase:CBN24477" /db_xref="WormBase:WBGene00163202" CDS complement(join(1624023..1624161,1624252..1624543, 1624818..1625022,1625067..1625393,1625692..1625794, 1625836..1626005,1626054..1626232,1626284..1626352, 1626399..1626486,1626540..1626743)) /locus_tag="CAEBREN_24477" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000210 (BTB/POZ-like), IPR006652 (Kelch repeat type 1), IPR011333 (BTB/POZ fold), IPR011498 (Kelch repeat type 2), IPR015916 (Galactose oxidase, beta-propeller), IPR013069 (BTB/POZ), IPR011705 (BTB/Kelch-associated), IPR013089 (Kelch related), IPR015915 (Kelch-type beta propeller)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45695.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR006652" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR011498" /db_xref="InterPro:IPR011705" /db_xref="InterPro:IPR013069" /db_xref="InterPro:IPR013089" /db_xref="InterPro:IPR015915" /db_xref="InterPro:IPR015916" /db_xref="WormBase:CBN24477" /db_xref="WormBase:WBGene00163202" /translation="MADAENPSKTEPFGKIPLCTDDDYDFQKIDILNEMYKKSYTIFN ELRSKCQLCDVALVMENRKLSAHRVILAATIPYFRGMFTLDLMEANMKEINIEEMNYE TVDALLSFAYTGELRISTSNVQSLMMGANFFQMLEVVQHCANFLMTRLHPSNALSIRD FCKMMCVEKSVAEKTADYIKKHFTAVAKECDFKKLSLEDAVELLKIDDLYVDSEEQIF QAAMDWLKFDKMRHEHAAKILLCVRLPLLSPTYLSSAVASNSIIKKDIPCRDLIDEAK DYHLLPECRASLKSFKCTPRKPIQIPGLIVAIGGLMHQSQSKSSVEIYNPLLKKWSSI EGLVTLRTRVGVAVHQRQVYAIGGFNGQDRMDLVEKFDYDTSKWRKLSPLIRKRSALA AAFVSDRLYVCGGYDGNHSLSTTEIYDIKKDVWESGPSMDNQRSAAGVTVMDKHIYVC GGHDGMQIFATVERLDTKTLQWERVPSMIQQRCRFGAATYKGKIYVAGGYDGTSFLKS VEVFDPKEGKWAPVSGMNMRRSRVSLVATTEGLFAVAGFDGENNLCSMEQYDEVTDSW SIATPLTCHEGGVGVGVIPMPPHML" gene <1627021..>1628828 /gene="Cbn-cdk-5" /locus_tag="CAEBREN_19302" /db_xref="WormBase:WBGene00158027" mRNA join(<1627021..1627057,1627109..1627197,1627244..1627876, 1628608..1628688,1628742..>1628828) /gene="Cbn-cdk-5" /locus_tag="CAEBREN_19302" /product="CBN-CDK-5 protein" /db_xref="WormBase:WBGene00158027" CDS join(1627021..1627057,1627109..1627197,1627244..1627876, 1628608..1628688,1628742..1628828) /gene="Cbn-cdk-5" /locus_tag="CAEBREN_19302" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR017441 (Protein kinase, ATP binding site), IPR002290 (Serine/threonine-protein kinase domain), IPR008271 (Serine/threonine-protein kinase, active site), IPR001245 (Serine-threonine/tyrosine-protein kinase), IPR017442 (Serine/threonine-protein kinase-like domain), IPR020635 (Tyrosine-protein kinase, catalytic domain)" /codon_start=1 /product="CBN-CDK-5 protein" /protein_id="EGT45649.1" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="WormBase:CBN19302" /db_xref="WormBase:WBGene00158027" /translation="MLNYDKMEKIGEGTYGTVFKARNKSSGEIVALKRVRLDDDDEGV PSSALREICILRELKHRNVVRLYDVVHSENKLTLVFEYCDQDLKKFFDSLNGYMDAQT ARSLMLQLLRGLSFCHAHHVLHRDLKPQNLLINTNGTLKLADFGLARAFGVPVRCFSA EVVTLWYRPPDVLFGAKLYNTSIDMWSAGCIFAGQKSKLENLIGKLVLSEISNAGRPL FPGADVDDQLKRIFKQLGTPTEESWPSISQLPDFKAYPVYHPTLTWSQIVPNLNTRGR DLLQKLLVCNPAGRIDADAALRHAYFADTSDV" gene complement(<1629324..>1630453) /locus_tag="CAEBREN_25116" /db_xref="WormBase:WBGene00163841" mRNA complement(join(<1629324..1629882,1629937..1630157, 1630207..1630271,1630396..>1630453)) /locus_tag="CAEBREN_25116" /product="hypothetical protein" /db_xref="WormBase:CBN25116" /db_xref="WormBase:WBGene00163841" CDS complement(join(1629324..1629882,1629937..1630157, 1630207..1630271,1630396..1630453)) /locus_tag="CAEBREN_25116" /note="contains similarity to Pfam domain PF00153; contains similarity to Interpro domains IPR002067 (Mitochondrial carrier protein), IPR018108 (Mitochondrial substrate/solute carrier), IPR001993 (Mitochondrial substrate carrier), IPR002113 (Adenine nucleotide translocator 1)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45796.1" /db_xref="InterPro:IPR001993" /db_xref="InterPro:IPR002067" /db_xref="InterPro:IPR002113" /db_xref="InterPro:IPR018108" /db_xref="PFAM:PF00153" /db_xref="WormBase:CBN25116" /db_xref="WormBase:WBGene00163841" /translation="MSKEKSFDTKKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQD ASKTITADKRYKGIMDVLVRVPKEQGVAALWRGNLANVIRYFPTQALNFAFKDTYKAI FLEGLDKKKDFWKFFAGNLASGGAAGATSLCFVYPLDFARTRLAADIGKANDREFKGL ADCLVKIVKSDGPIGLYRGFFVSVQGIIIYRAAYFGMFDTAKMVFAADGKKLNFFAAW GIAQVVTVGSGILSYPWDTVRRRMMMQSGRKDILYKNTLDCAKKIIQNEGISAMFKGA LSNVFRGTGGALVLAIYDEIQKFL" gene <1631220..>1631447 /locus_tag="CAEBREN_11076" /db_xref="WormBase:WBGene00149801" mRNA <1631220..>1631447 /locus_tag="CAEBREN_11076" /product="hypothetical protein" /db_xref="WormBase:CBN11076" /db_xref="WormBase:WBGene00149801" CDS 1631220..1631447 /locus_tag="CAEBREN_11076" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45716.1" /db_xref="WormBase:CBN11076" /db_xref="WormBase:WBGene00149801" /translation="MSSHKQEPLEENVDQLTQFRERCADHVTEFKALLDECNDRVNSR TETEETCHQEMTDYVHHLDHCAMPKAFAALK" gene <1631604..>1635002 /gene="Cbn-abcf-2" /locus_tag="CAEBREN_21766" /db_xref="WormBase:WBGene00160491" mRNA join(<1631604..1631678,1631728..1631910,1631965..1633095, 1634357..1634485,1634585..1634788,1634862..>1635002) /gene="Cbn-abcf-2" /locus_tag="CAEBREN_21766" /product="CBN-ABCF-2 protein" /db_xref="WormBase:WBGene00160491" CDS join(1631604..1631678,1631728..1631910,1631965..1633095, 1634357..1634485,1634585..1634788,1634862..1635002) /gene="Cbn-abcf-2" /locus_tag="CAEBREN_21766" /note="contains similarity to Pfam domain PF00005; contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR017871 (ABC transporter, conserved site), IPR003593 (ATPase, AAA+ type, core)" /codon_start=1 /product="CBN-ABCF-2 protein" /protein_id="EGT45679.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="PFAM:PF00005" /db_xref="WormBase:CBN21766" /db_xref="WormBase:WBGene00160491" /translation="MPSDAKKAREAAKKAASKGGKGKKKEVTPSMSENASVASLTALD EELDQAAATLAKIELENAAARSVAGALTSDPKGLDHRVESLTITFHGREIVVDTKLEL NRGRRYGLIGLNGSGKSTVLQAIYNKEMPIPENVDMYLVSREMPASEMTALQAVVDVD SVRKDLEHLAEQLAGETDEESQEKLMDVYERLDEMDAELAEKKAAEILHGLGFTKTMQ MKKCKDFSGGWRMRIALARALYLKPSVLLLDEPTNHLDLEACVWLEEELSQYKRTLLV VSHSQDFMNGVCTNIIHLFQKQLVYYGGNYDQFVKTRLELLENQQKRYNWEQSQLQHM KDYVARFGHGSAKLARQAQSKEKTMAKMIAGGLTEKAVTETVKQFYFFDAGEIPPPVI MVQHVSFRYNENTPWIYKDIDFGIDLDTRIALVGPNGAGKSTLLKLLCSDVMPTDGLI RRHSHCKIGRYHQHLHEELPLDLSALEFMMKEFPDVKEKEEMRKIVGRYGITGREQVC PMKQLSDGQRCRVSFAWLAWQQPHLLLLDEPTNHLDMESIDALAEAINCFPGGMILVS HDFRLVSQVAEEVWVCDNQGITKWDGDIFSFKQHLRKQIDKEMTNREKGLVKER" gene <1637511..>1647951 /gene="Cbn-cua-1" /locus_tag="CAEBREN_17358" /db_xref="WormBase:WBGene00156083" mRNA join(<1637511..1637710,1638470..1638657,1639045..1639080, 1640433..1640606,1640654..1640749,1640799..1640944, 1640995..1641094,1641750..1641916,1641975..1642213, 1642356..1642530,1642670..1643153,1643709..1643959, 1644093..1644278,1644325..1644507,1644889..1645105, 1645155..1645304,1645628..1645797,1646127..1646421, 1647566..>1647951) /gene="Cbn-cua-1" /locus_tag="CAEBREN_17358" /product="CBN-CUA-1 protein" /db_xref="WormBase:WBGene00156083" CDS join(1637511..1637710,1638470..1638657,1639045..1639080, 1640433..1640606,1640654..1640749,1640799..1640944, 1640995..1641094,1641750..1641916,1641975..1642213, 1642356..1642530,1642670..1643153,1643709..1643959, 1644093..1644278,1644325..1644507,1644889..1645105, 1645155..1645304,1645628..1645797,1646127..1646421, 1647566..1647951) /gene="Cbn-cua-1" /locus_tag="CAEBREN_17358" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR008250 (ATPase, P-type, ATPase-associated domain), IPR001757 (ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter), IPR006122 (Copper ion-binding), IPR018303 (ATPase, P-type phosphorylation site), IPR006121 (Heavy metal transport/detoxification protein), IPR006403 (ATPase, P type, cation/copper-transporter), IPR017969 (Heavy-metal-associated, conserved site), IPR005834 (Haloacid dehalogenase-like hydrolase), IPR000695 (ATPase, P-type, H+ transporting proton pump), IPR006416 (ATPase, P-type, heavy metal translocating)" /codon_start=1 /product="CBN-CUA-1 protein" /protein_id="EGT45834.1" /db_xref="InterPro:IPR000695" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR005834" /db_xref="InterPro:IPR006121" /db_xref="InterPro:IPR006122" /db_xref="InterPro:IPR006403" /db_xref="InterPro:IPR006416" /db_xref="InterPro:IPR008250" /db_xref="InterPro:IPR017969" /db_xref="InterPro:IPR018303" /db_xref="WormBase:CBN17358" /db_xref="WormBase:WBGene00156083" /translation="MSENVSLLDGSPLLPRPPPPPSRPSSTNTLIPRPPSKNDQILVD FGVGSKDNEAKKNDVKEVMLEIKGMTCHSCVNNIQDHIGAKPGIYSIQVNLKDENGKV SFDPEKWTDERVAEAVDDMGFECKVIQVGELVIRNLLVLPPPCPFDPIMTESKKKKPR RAIVSIDGMTCHACVNNIQDTVGSKDGIQKIVVSLEQKQGTIDYDPEKWTGEQVAEAV DDMGFECKLIQDQEFSEPATIEITKLPPTPKKICPPDTKSPRKFETDGRVELRLNGVK YSKADSSEHLEKCTYSVQGMTCASCVQYIERNVSKMDGVHSIVVALIAAKAEVIYDNR ETSADAIAEQMTDLGYTATLLDSAGNSNLNKIRLIIGNLSTENDANRIESHVLSKRGI DSCSVSIATSMALVEFSSELIGPRDIIQVIESLGFSAELATKNDQMRSLDHSEDVEKW RNTFLISLVCGVPVMVIMIIFHWILHTPMHPEKQTPIFTPALSLDNFLLLILCTPVQI FGGRYFYAASWKAIKHGNANMDVLIVLATTIAYTYSIVVLLLAIVFKWPSSPMTFFDV PPMLIVFIALGRMLEHKAKGKTSEALSKLMSLQAKEATLVTMDTEGRLTSEKGINIEL VQRDDLIKVVPGAKVPVDGVVIDGKSSADESFITGESMPVVKKPGSTVIGGSVNQKGV LIVKATHVGKDSTLSQIVRLVEEAQTNRAPIQQLADRIAGYFVPCVIGLSLLTLAVWI LIEYNLERNANMPPGLRFEEALKIAFEAAITVLAIACPCSLGLATPTAVMVGTGVGAA NGILIKGGEPLESVHKVTTIVFDKTGTITEGRPRVVQIASFVNPSLMSLKLMTFLAGA TEALSEHPIGNAISAFAKQLLKDPTWPKTSKFHVDSGHGVICKIEEIRQSFASLVLNG STSSSPEIPRIPDGQTLPIPGTEVLLLQVSSRDVVQPNPDTAKIVIGTERMMEKNGIF VSDVVKMTLAEEQRKGHISVICAINEEVVSVISIADQVKKEASLAIYTLREMGLRVVL LTGDNSKTAESTAKQVGIDEVFAEVLPNQKQEKIKQLKEYGNKVAMIGDGVNDSPALA EANVGIAIAAGSDVAIESAGIVLVRNDLIDVVGAIKLSKMTTRRIRLNFLFAIIYNAI GIPIAAGVFRPFGFMLQPWMAAAAMALSSVSVVSSSLLLKNFRKPTVANLYTPAFKRH QKFLESGRFHVEVHRGLDDSGVFRGHASSKLSVWSSKVGSLLGSTTSIVSGASAKKQR LLDGGAGSAGSDLEDLIV" assembly_gap 1647453..1647462 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1651407..>1652417 /locus_tag="CAEBREN_16998" /db_xref="WormBase:WBGene00155723" mRNA join(<1651407..1651440,1651938..1652155,1652208..>1652417) /locus_tag="CAEBREN_16998" /product="hypothetical protein" /db_xref="WormBase:CBN16998" /db_xref="WormBase:WBGene00155723" CDS join(1651407..1651440,1651938..1652155,1652208..1652417) /locus_tag="CAEBREN_16998" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45846.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN16998" /db_xref="WormBase:WBGene00155723" /translation="MVSNILIIVNFVDRNSQGLGKWFKTCSRALNRITTYNCANISRK LRDCFNLIILSTIANETFNQIAEEFSFGCPKQLYIWISTHIINKDTYNASGLAIQVDD LELIDCRIISFFESSFEAAEFNQVIRNWIGGKYEKLEVLIFWVADWHRAEQ" gene <1653572..>1653913 /locus_tag="CAEBREN_05613" /db_xref="WormBase:WBGene00144338" mRNA <1653572..>1653913 /locus_tag="CAEBREN_05613" /product="hypothetical protein" /db_xref="WormBase:CBN05613" /db_xref="WormBase:WBGene00144338" CDS 1653572..1653913 /locus_tag="CAEBREN_05613" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45564.1" /db_xref="WormBase:CBN05613" /db_xref="WormBase:WBGene00144338" /translation="MFLVWHFTRHFKTKHWFNIPSARESVSNWTSNTSDKIWTMDSKR RISMQTTVSDIQWMVTRSISQLHIRKQQSSTMDFYSEWEMVRPNIKKAALHLTWNRQS QEFVWLVELFE" assembly_gap 1655712..1655857 /estimated_length=146 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1656317..>1657529 /locus_tag="CAEBREN_05699" /db_xref="WormBase:WBGene00144424" mRNA join(<1656317..1656331,1657221..1657336,1657391..>1657529) /locus_tag="CAEBREN_05699" /product="hypothetical protein" /db_xref="WormBase:CBN05699" /db_xref="WormBase:WBGene00144424" CDS join(1656317..1656331,1657221..1657336,1657391..1657529) /locus_tag="CAEBREN_05699" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45751.1" /db_xref="WormBase:CBN05699" /db_xref="WormBase:WBGene00144424" /translation="MEFVKDVSDMDEQPPNKKVQWDHGKKKYRGAYFISNGECKHEER YVDHKILRNLRVIWKLAKSMQCHCGRSRHTGVLIYSTDIAPVSTK" gene <1658363..>1660273 /locus_tag="CAEBREN_09689" /db_xref="WormBase:WBGene00148414" mRNA join(<1658363..1658422,1658468..1658540,1659397..1659580, 1659931..>1660273) /locus_tag="CAEBREN_09689" /product="hypothetical protein" /db_xref="WormBase:CBN09689" /db_xref="WormBase:WBGene00148414" CDS join(1658363..1658422,1658468..1658540,1659397..1659580, 1659931..1660273) /locus_tag="CAEBREN_09689" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45722.1" /db_xref="WormBase:CBN09689" /db_xref="WormBase:WBGene00148414" /translation="MNHAVHGIWTFGLLERDTNKVSMFQVAEKNAATLLPQIEANGVP GFVKFHKYPVRRQGLLENQLDENSTRDMHVKLVEKESDAFKEGLYMFDSIQWTTRQMK SIRRPLTYPEQDINSKHLIAINKKVLKGQEELQNQMGDIQLFQQGISRTITRMQQNLR ETLTRLQRQAEPQGASPSEPQSSEHTGEEEDKIFVNSDPSKGNGDDEPNLTGITADGR R" gene <1663876..>1667435 /locus_tag="CAEBREN_25884" /db_xref="WormBase:WBGene00164609" mRNA join(<1663876..1663882,1663928..1664022,1664068..1664299, 1665184..1665408,1666339..1666431,1666728..1666783, 1666842..1667021,1667070..1667128,1667180..>1667435) /locus_tag="CAEBREN_25884" /product="hypothetical protein" /db_xref="WormBase:CBN25884" /db_xref="WormBase:WBGene00164609" CDS join(1663876..1663882,1663928..1664022,1664068..1664299, 1665184..1665408,1666339..1666431,1666728..1666783, 1666842..1667021,1667070..1667128,1667180..1667435) /locus_tag="CAEBREN_25884" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45719.1" /db_xref="WormBase:CBN25884" /db_xref="WormBase:WBGene00164609" /translation="MPYVVLRNLIIQSGFNYNIVTTWISRFETEVVQLSYTLLFCDKS HLYHSKNDAQLFAQKRLRLREIFPEGTRRNLKKKKKLDENQQCIKFSKPDDEFFVTNR DEPLIAGLKISKTPKCTKYKMCIEEMKLCTICLGSAKTHVPAECTFLRRKFQGEACKL KCCGKRFLIHPPHNLPQLIRKDPGRRKSEKLKKLDNKFLKQASSTPSAETFNENVRKK KSDEPKIDITEALLALRDTTEEKWCVKNDKKPDNSCSNAASTLTMQQKEPSSSNGEKL PRVKTTNEALSLQDLAVSEPVKDTARDHATISFTKDEMNGVLLHLYTECGLDLKGNNE GWEDTVLYKMLFTKCYLYINAMKLIRVPSAVSRLKARPVSRPENYGVHTNESNALLEE RSYRKKRL" assembly_gap 1670461..1670603 /estimated_length=143 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1675259..>1680988) /locus_tag="CAEBREN_10828" /db_xref="WormBase:WBGene00149553" mRNA complement(join(<1675259..1675601,1676299..1676496, 1678296..1678582,1678629..1678874,1678994..1679191, 1679240..1679322,1679377..1679654,1680042..1680337, 1680638..1680791,1680909..>1680988)) /locus_tag="CAEBREN_10828" /product="hypothetical protein" /db_xref="WormBase:CBN10828" /db_xref="WormBase:WBGene00149553" CDS complement(join(1675259..1675601,1676299..1676496, 1678296..1678582,1678629..1678874,1678994..1679191, 1679240..1679322,1679377..1679654,1680042..1680337, 1680638..1680791,1680909..1680988)) /locus_tag="CAEBREN_10828" /note="contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45610.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="WormBase:CBN10828" /db_xref="WormBase:WBGene00149553" /translation="MSRLVCPMCSEELEEEGDHFYKHFKYKKFPCGETGCKEEFYTGA KRNAHCTEMKHKRSFQVENVIVEEDLAGNLGNIANHVNPYMDKLVSIVVADARALAAN GKDIDATIKSRWGSDANETSSSAPVTSSERTATDPGKKKRNSAVSSNTNPAAKKTKSL IGAPSAKSTFATTSADSSTRTSDDSAAQATSSTSSMNLPNPVADSTTNDIPQFETPTL PAAKKQRKKRDSATSSSTQKTTVAAVETEEEIPDDIKVECQTCRAKVPYQLQYRHAHA KTHVTDSDETSADYEQVLEGAVNKAFPGLPNGVHNCQLCMEPEKEITLTKQREHIETR HKNEIPELQCPKCDRVFEQQCRLSAHMRDQHGLQLTFIDSEFQERRTRRNEMIKALRK KYFPISYKGKLKRQSKKQPTTPAQNPVANPPSSYEPGSLSSVIVNDIRVVEARKTRRA PRYQEQSDSSDDENEDEEEEEDDDTSNTVPIDCSADIIFVEQRFLTEVQEKLLSRASS MVNIKKEVVDPADGEETKEEEKTPSPKPDEQQRPPTPIYAKYEPTVPPPGYAPYPLLG LHSGVGSIPLPPSPLNRPISPSSTISAPATTRNRDRSSRERTLSPPRRHRSPYDNNRQ SSSSTYNDRNENRRRRGGGSSSRSYVSGSGGRYQNHHHHQNRGGGGRAGGEERGAQSE NESRGDRGRSGGYRSYDSPYYRPPSSNSSHNRGRSHHY" gene complement(<1681775..>1682628) /locus_tag="CAEBREN_16802" /db_xref="WormBase:WBGene00155527" mRNA complement(join(<1681775..1681836,1682106..1682458, 1682510..>1682628)) /locus_tag="CAEBREN_16802" /product="hypothetical protein" /db_xref="WormBase:CBN16802" /db_xref="WormBase:WBGene00155527" CDS complement(join(1681775..1681836,1682106..1682458, 1682510..1682628)) /locus_tag="CAEBREN_16802" /note="contains similarity to Pfam domain PF04969; contains similarity to Interpro domain IPR017447 (CS domain)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45536.1" /db_xref="InterPro:IPR017447" /db_xref="PFAM:PF04969" /db_xref="WormBase:CBN16802" /db_xref="WormBase:WBGene00155527" /translation="MSKQPQVLWAQRESLLFITIEVDEAKIEKLEGEGNKLHFAGSSK TDKYETTLEFFDEIDPASVKHTGSSTRVVEITIHKKKAAWWPRLLETKGKVHWLKVDF GKWKDEDEDADEAEADAGGLGNGMGSGFDLNSYMSSLGGGAGGADFGGLEDDEDDDMP DLEDNEEEEPKEADTKA" gene <1683782..>1686415 /gene="Cbn-toc-1" /locus_tag="CAEBREN_22100" /db_xref="WormBase:WBGene00160825" mRNA join(<1683782..1683911,1683965..1684110,1684431..1684551, 1684873..1685131,1685356..1685496,1685549..1685630, 1686041..>1686415) /gene="Cbn-toc-1" /locus_tag="CAEBREN_22100" /product="CBN-TOC-1 protein" /db_xref="WormBase:WBGene00160825" CDS join(1683782..1683911,1683965..1684110,1684431..1684551, 1684873..1685131,1685356..1685496,1685549..1685630, 1686041..1686415) /gene="Cbn-toc-1" /locus_tag="CAEBREN_22100" /note="contains similarity to Pfam domain PF01545; contains similarity to Interpro domain IPR002524 (Cation efflux protein)" /codon_start=1 /product="CBN-TOC-1 protein" /protein_id="EGT45548.1" /db_xref="InterPro:IPR002524" /db_xref="PFAM:PF01545" /db_xref="WormBase:CBN22100" /db_xref="WormBase:WBGene00160825" /translation="MFGLAWVSRSLNHPQGKRGLISTLICLICVGILAFCVSTSHSIV LMSAMWITIFAFCSQFASLYSMSITDRPTHKFSYGLARVPVLAVFSTTTLAQLFSIFL SKESFEHLLSPDHHGAHDASAAHEHESEEVGNWPYFVGSAASSVALLLSAYALKNQPF QHVLTSATASSLQEHAADLSHAICFVIPGLSRLLLPRINSMVLLAATTTGLLMLCEHF KHDFAWADPVCCLLLSVAVFSTMWPLSTYTGMILLQTTPPHLINQIDRCVSEAQHIEG VLELRFGRYWQLDFNQLVGTVDVRVRREADEQNVLAHVTEKLSSVITVLTVQVVKDAA WSAGEVPYTNGHANSGGCSSSHDHNDHGHSHGGGGHDNHGHSHDSHDSHGHSHGGGGG GSDHGHSHGGGHSDHGHSHDGVVYH" gene <1687127..>1688600 /gene="Cbn-clk-1" /locus_tag="CAEBREN_10074" /db_xref="WormBase:WBGene00148799" mRNA join(<1687127..1687262,1687599..1687739,1688091..1688186, 1688237..1688349,1688523..>1688600) /gene="Cbn-clk-1" /locus_tag="CAEBREN_10074" /product="CBN-CLK-1 protein" /db_xref="WormBase:WBGene00148799" CDS join(1687127..1687262,1687599..1687739,1688091..1688186, 1688237..1688349,1688523..1688600) /gene="Cbn-clk-1" /locus_tag="CAEBREN_10074" /note="contains similarity to Interpro domain IPR011566 (Ubiquinone biosynthesis-like protein)" /codon_start=1 /product="CBN-CLK-1 protein" /protein_id="EGT45770.1" /db_xref="InterPro:IPR011566" /db_xref="WormBase:CBN10074" /db_xref="WormBase:WBGene00148799" /translation="MLRVLVRGAHTSAARQALIEKIIRVDHAGELGADRIYAGQLAVL KGSSVGSVIKKMWDEEKEHLDTMERLAAKHNVPHTVFSPVFSVAAYALGVGSALLGKE GAMACTIAVEELIGQHYNDQLKELLADDPETHKELLKILTRLRDEELHHHDTGVEHDG LKAPAYNALKWIIQTGCKGAIAIAEKI" assembly_gap 1691865..1692123 /estimated_length=259 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1693060..1693069 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <1712560..>1715879 /locus_tag="CAEBREN_30026" /db_xref="WormBase:WBGene00191991" mRNA join(<1712560..1712755,1712809..1712877,1714721..1714784, 1714913..1715006,1715135..1715286,1715756..>1715879) /locus_tag="CAEBREN_30026" /product="hypothetical protein" /db_xref="WormBase:CBN30026" /db_xref="WormBase:WBGene00191991" CDS join(1712560..1712755,1712809..1712877,1714721..1714784, 1714913..1715006,1715135..1715286,1715756..1715879) /locus_tag="CAEBREN_30026" /note="contains similarity to Pfam domains; contains similarity to Interpro domain IPR001715 (Calponin-like actin-binding)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45617.1" /db_xref="InterPro:IPR001715" /db_xref="WormBase:CBN30026" /db_xref="WormBase:WBGene00191991" /translation="MEIRGMSRPESVLQLARKFGEISAAQDNEIHKSRLSLKLGKENS SSKNHQLLMQSKSGPPTPIRHAAAAPIITTHTIRPQVGGIASLKFATEPKMSRPNMFK QMEKVGANPTSTAPPRQLNPNSIKDALLRWIQNRVAGYPNVNVTNFSSSWADGMAFCA LIHRFAPHSFDFSKLDPKNRRQNFDLAFKVAEDNGIFPLLEVDDMIMMGDRPDWKCVF TYVQSFYKQFRDHP" gene complement(1712943..1713014) /locus_tag="CAEBREN_27906" /db_xref="WormBase:WBGene00188517" tRNA complement(1712943..1713014) /locus_tag="CAEBREN_27906" /product="tRNA-Met" /db_xref="WormBase:CBN27906" /db_xref="WormBase:WBGene00188517" assembly_gap 1726598..1726607 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1728810..>1729781) /locus_tag="CAEBREN_13772" /db_xref="WormBase:WBGene00152497" mRNA complement(<1728810..>1729781) /locus_tag="CAEBREN_13772" /product="hypothetical protein" /db_xref="WormBase:CBN13772" /db_xref="WormBase:WBGene00152497" CDS complement(1728810..1729781) /locus_tag="CAEBREN_13772" /note="contains similarity to Pfam domain PF07735; contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45688.1" /db_xref="InterPro:IPR012885" /db_xref="PFAM:PF07735" /db_xref="WormBase:CBN13772" /db_xref="WormBase:WBGene00152497" /translation="MLLSILSKRTMTLIKWLKLELKHLTVDLQDKVYLSLKFNDNDEI VVYLDINGDSNDLEILTSDVIVVRLITAFEQQEDLYFDWKYPNVGHWIDHFHNIFSYQ YVDLSFFELRTLRYSIESIVRTLEGIPIQILYVTNGYDVFRRVLHYFPTPRLLDIIDK ELPGSHPAPCFEFMAKLLIQNFDALYFHSSIPFTLDSLLMMNSPFLWTLASKLSDREL NMYIRFWMNNPSSKLESLGLCYRSLYPDEHRPLRVFNKDVIFKGIDYIERPSDLKRDF QYSIDFHSYQGHCVCFYGGYDITRRDGTNCSISIDLEYSTFQMFVWP" assembly_gap 1730208..1730542 /estimated_length=335 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1731824..1744479 /estimated_length=12656 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1745083..1745092 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1748095..>1749077) /locus_tag="CAEBREN_15338" /db_xref="WormBase:WBGene00154063" mRNA complement(join(<1748095..1748352,1748398..1748833, 1748899..>1749077)) /locus_tag="CAEBREN_15338" /product="hypothetical protein" /db_xref="WormBase:CBN15338" /db_xref="WormBase:WBGene00154063" CDS complement(join(1748095..1748352,1748398..1748833, 1748899..1749077)) /locus_tag="CAEBREN_15338" /note="contains similarity to Pfam domain PF04900; contains similarity to Interpro domain IPR006984 (Protein of unknown function DUF652)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45608.1" /db_xref="InterPro:IPR006984" /db_xref="PFAM:PF04900" /db_xref="WormBase:CBN15338" /db_xref="WormBase:WBGene00154063" /translation="MPKAQQQRLLNYATSIAKCPTETSAYGSCVSAQAERIKQGDCNA EFKKLIDCVTKNLKKKLKRANRLLTFYKYNYKFVPPFRVLVDGTFCNAALQEKLNLAE QIPKYLTEETHLMTTNCVIKELEKFGPLLYGALVIAKQFEIAECPHSTPKAASDCLAH LARRAASGKTKYLIATQDDELTEKLRTIVGTPIMYIKFKTVLLDNISEATKSGCSRDE NEIKKLKELKKEILESKNVVEKKKKKKKKGGANPLSCKKKVMKASVETIRTGERTATG KRKRTKKKGTIAEE" gene <1749596..>1751412 /locus_tag="CAEBREN_28975" /db_xref="WormBase:WBGene00190940" mRNA join(<1749596..1749686,1749739..1749821,1749869..1750498, 1750554..1751265,1751315..>1751412) /locus_tag="CAEBREN_28975" /product="hypothetical protein" /db_xref="WormBase:CBN28975" /db_xref="WormBase:WBGene00190940" CDS join(1749596..1749686,1749739..1749821,1749869..1750498, 1750554..1751265,1751315..1751412) /locus_tag="CAEBREN_28975" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000793 (ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal), IPR004100 (ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal), IPR020003 (ATPase, alpha/beta subunit, nucleotide-binding domain, active site), IPR000194 (ATPase, alpha/beta subunit, nucleotide-binding domain), IPR005722 (ATPase, F1 complex, beta subunit), IPR003593 (ATPase, AAA+ type, core)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45626.1" /db_xref="InterPro:IPR000194" /db_xref="InterPro:IPR000793" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR004100" /db_xref="InterPro:IPR005722" /db_xref="InterPro:IPR020003" /db_xref="WormBase:CBN28975" /db_xref="WormBase:WBGene00190940" /translation="MASRSLASVSRSASRLLQSNVQKCALPAASIRLSSSNVESKKGL HTGVATQQAAAATKVSAKATAANASGRIVAVIGAVVDVQFDENLPPILNGLEVVGRSP RLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDPIKIPVGPETLGRIMNVIGEP IDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAG VGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIEGGVIDLKGKNSKVSL VYGQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRI PSAVGYQPTLATDMGGMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATT VLSRGIAELAIYPAVDPLDSTSRIMDPNIVGQNHYDIARGVQKILQDYKSLQDIIAIL GMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHQGKFVSLEETIRGFTMILKGEL DHLPEVAFYMQGGIDDVFKKAEELAKQHS" gene <1751774..>1757095 /gene="Cbn-prmt-5" /locus_tag="CAEBREN_20435" /db_xref="WormBase:WBGene00159160" mRNA join(<1751774..1752063,1752110..1752191,1752234..1752427, 1752803..1753087,1753514..1753913,1754318..1754799, 1755981..1756371,1757024..>1757095) /gene="Cbn-prmt-5" /locus_tag="CAEBREN_20435" /product="CBN-PRMT-5 protein" /db_xref="WormBase:WBGene00159160" CDS join(1751774..1752063,1752110..1752191,1752234..1752427, 1752803..1753087,1753514..1753913,1754318..1754799, 1755981..1756371,1757024..1757095) /gene="Cbn-prmt-5" /locus_tag="CAEBREN_20435" /note="contains similarity to Pfam domain PF05185; contains similarity to Interpro domain IPR007857 (Skb1 methyltransferase)" /codon_start=1 /product="CBN-PRMT-5 protein" /protein_id="EGT45794.1" /db_xref="InterPro:IPR007857" /db_xref="PFAM:PF05185" /db_xref="WormBase:CBN20435" /db_xref="WormBase:WBGene00159160" /translation="MSNRTYADELFPQEVIEQHEEEMDISTNSVVLVSSPNPVEEANA RIHVGWMTTRLDANENSDRQIAAYCTELGKFKYNFVVFPIGGVVRAYWKPSESIEIHP PCIDLPDVQLSNSLWETYINGKISEWIDCDSPDPLFAALSEEHLLKELNYVCYMGLQT MTIELKRISSPKTSAILNKWIWTRNTRFTVWIQLPAAIEKCLDYDGSTATASSDLWTI WSDFRNQCNNFSGVYLQVVLSLGANLPDELIESKLVERWKAEPLAGFVVESELFVTGR HGEACLPNAHLLLLKSLWSSDSLRLVLRATTDTFKYNMTIKSEYSLALRQAVRDVHFR RRRDDGSTDSAHSLNVGEYRDVLQAPLQPLSENLDSGVYNTFEQDKLKYEVYGEAVEG ALKDLGADGRRQCIVYLLGGGRGPIGTKILRAEKEYNLKFRAGKDPLKVKLYIVEKNP NAIVTLKFMNARTWKRRVTIVESDMRSLPGIARDRGFEQPDIIVSELLGSFGDNELSP ECLDGVTEFLKPTTISIPQKYTSYVAPIMSSHLHQTIRAQSIPFLSRALPAHGRGEPE LDEEGTWVQRYPQGHVRNNMDQIYVVFLSKYIALADKTKPVFTFDHPNFQNTTNERSN CIEFKMDRNADVMGFAGYFDLQLYKNIMLSIEPSTHTSGMMSWFPAVIPLRHQLRVAN GDKIRLKIERKVDAKGVWYEWCVELEKPTGEITTTPVQNPNGESYYMRM" gene <1758006..>1759024 /locus_tag="CAEBREN_03182" /db_xref="WormBase:WBGene00141907" mRNA join(<1758006..1758509,1758761..>1759024) /locus_tag="CAEBREN_03182" /product="hypothetical protein" /db_xref="WormBase:CBN03182" /db_xref="WormBase:WBGene00141907" CDS join(1758006..1758509,1758761..1759024) /locus_tag="CAEBREN_03182" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45729.1" /db_xref="WormBase:CBN03182" /db_xref="WormBase:WBGene00141907" /translation="MLANRLSLASSTTRCVLLATSQEATTTTTQTRQMGRRQPKQGKP PILPPSKKVLYHVVHAPWQKPEDVEELLWRRHAYNNAVISLREVFRAEIAQNASHGQG IEAMKEAEAVELDELIASNEKRNEEKRAARAAMEEEAAKETKAVILEEIRVELEKRNV EKKAAEEEVRAAISRSDGFVNRENLETKILEALEKPTIYDFAIDRAGNKYYVPEPVKY QEGTPTRQKGRLYDQTLGTQHGTMEEAHGRQQQQQSL" gene <1759960..>1765125 /gene="Cbn-wars-2" /locus_tag="CAEBREN_15315" /db_xref="WormBase:WBGene00154040" mRNA join(<1759960..1760052,1760653..1760752,1760833..1760972, 1761025..1761264,1763136..1763533,1763909..1764191, 1764606..1764713,1764802..1764957,1765033..>1765125) /gene="Cbn-wars-2" /locus_tag="CAEBREN_15315" /product="CBN-WARS-2 protein" /db_xref="WormBase:WBGene00154040" CDS join(1759960..1760052,1760653..1760752,1760833..1760972, 1761025..1761264,1763136..1763533,1763909..1764191, 1764606..1764713,1764802..1764957,1765033..1765125) /gene="Cbn-wars-2" /locus_tag="CAEBREN_15315" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR002305 (Aminoacyl-tRNA synthetase, class Ib), IPR001412 (Aminoacyl-tRNA synthetase, class I, conserved site), IPR014729 (Rossmann-like alpha/beta/alpha sandwich fold), IPR006845 (Pex, N-terminal), IPR002306 (Tryptophanyl-tRNA synthetase, class Ib)" /codon_start=1 /product="CBN-WARS-2 protein" /protein_id="EGT45678.1" /db_xref="InterPro:IPR001412" /db_xref="InterPro:IPR002305" /db_xref="InterPro:IPR002306" /db_xref="InterPro:IPR006845" /db_xref="InterPro:IPR014729" /db_xref="WormBase:CBN15315" /db_xref="WormBase:WBGene00154040" /translation="MNTYVAEIGEIVRSHRRDEEYIDEIADRLSKVSKELLGQRAWIR WFPYLKTIASTLYYSSTVVAGNQTLGEEYVHLFESDSLQRVVPPIPSRISFVLLHSVF PLISNFLIQKAETTLTHPSTVHFLGIPIRENRKARQSFLDVFFWLRTTLFPQLRRAHI AVFYITGAYYSIARRVTGIRFLSASAHTDIPSSLPRHLSTSSSTHPTIYFTGIQPTGI PHLGNFFGSIEPWIELQNTVDPGTQMMLSVVDQHAISLGPLPAAQLRQNTRQMTASLI SCGVDPKRTLLFRQSDVPHIAQLSWILGALQTTSKLARLPQYKEKQERFKKGDIPVGL LTYPLLQAADVLTFKATTVPVGEDQSQHLNLLGGLAYAFNKTYETDIFPIPKQLTRET HARIRSLRDPEKKMSKSSGGARSRIEITDSRDAIIEKCQKAQSDNLGTVTYDKENRLA VSNLLDLLSAVTRTPVAEMDSSTWSTLDLKMNLAEAIDKRLAPIRQKFEELENSDEVE KILLESGEAAREIAEKNLKEIRRVVGFL" gene complement(<1766111..>1767904) /locus_tag="CAEBREN_05278" /db_xref="WormBase:WBGene00144003" mRNA complement(join(<1766111..1766383,1766978..1767104, 1767711..>1767904)) /locus_tag="CAEBREN_05278" /product="hypothetical protein" /db_xref="WormBase:CBN05278" /db_xref="WormBase:WBGene00144003" CDS complement(join(1766111..1766383,1766978..1767104, 1767711..1767904)) /locus_tag="CAEBREN_05278" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR001092 (Helix-loop-helix DNA-binding domain), IPR011598 (Helix-loop-helix DNA-binding), IPR022575 (Neurogenic differentiation factor, domain of unknown function)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45690.1" /db_xref="InterPro:IPR001092" /db_xref="InterPro:IPR011598" /db_xref="InterPro:IPR022575" /db_xref="WormBase:CBN05278" /db_xref="WormBase:WBGene00144003" /translation="MRPMDTSNFAPAELNKRKIRRVKANGRERARMHGLNDALDNLRE YIPITTQHQKLSKIETLRLARNYIDALQRMLRTNEQPTPLQYAHTLANGLSQTTTNML ANLLQVQPRLLLPPSQFDMFSDPTSSSSTQHPLHLHHSHPQQHSSSSSFSSPTSSCSP PQYYYSPNQPSAAPLQASLDLAQYQQMYHSNEYNFSQ" assembly_gap 1781279..1781804 /estimated_length=526 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1782439..>1783714) /locus_tag="CAEBREN_06155" /db_xref="WormBase:WBGene00144880" mRNA complement(join(<1782439..1782687,1783067..1783402, 1783619..>1783714)) /locus_tag="CAEBREN_06155" /product="hypothetical protein" /db_xref="WormBase:CBN06155" /db_xref="WormBase:WBGene00144880" CDS complement(join(1782439..1782687,1783067..1783402, 1783619..1783714)) /locus_tag="CAEBREN_06155" /note="contains similarity to Pfam domain PF01302; contains similarity to Interpro domain IPR000938 (Cytoskeleton-associated protein, CAP-Gly)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45660.1" /db_xref="InterPro:IPR000938" /db_xref="PFAM:PF01302" /db_xref="WormBase:CBN06155" /db_xref="WormBase:WBGene00144880" /translation="MSEVYELEVTTNATNFPMEKKYPAAITLNDLKKKLELVVGTTAD SMRIQLFDENGQLKNELQDGAKSLKELGVRDGDRLHAIDITGANEELKDESMVEKYEM SDEAYSKRTDSVRAWKKKIQGELEPVKSGEKVEEKEISEKIKVGERCEVTVGAQMARR GEIAFVGTTQFKDGVWVGVKYDEPVGKNDGSVAGVRYFECDPKYGGFVRPVDVNVGDF PELSIDEM" gene complement(<1785599..>1788155) /locus_tag="CAEBREN_11075" /db_xref="WormBase:WBGene00149800" mRNA complement(join(<1785599..1785668,1785720..1785811, 1785878..1785985,1786042..1786135,1786187..1786317, 1786705..1786901,1787101..1787529,1788017..>1788155)) /locus_tag="CAEBREN_11075" /product="hypothetical protein" /db_xref="WormBase:CBN11075" /db_xref="WormBase:WBGene00149800" CDS complement(join(1785599..1785668,1785720..1785811, 1785878..1785985,1786042..1786135,1786187..1786317, 1786705..1786901,1787101..1787529,1788017..1788155)) /locus_tag="CAEBREN_11075" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR003604 (Zinc finger, U1-type), IPR002627 (tRNA isopentenyltransferase), IPR018022 (tRNA delta(2)-isopentenylpyrophosphate transferase), IPR002648 (Isopentenyl transferase), IPR007087 (Zinc finger, C2H2-type)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45768.1" /db_xref="InterPro:IPR002627" /db_xref="InterPro:IPR002648" /db_xref="InterPro:IPR003604" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR018022" /db_xref="WormBase:CBN11075" /db_xref="WormBase:WBGene00149800" /translation="MTTTPRKKPIIFVIGCTGTGKSDLGVAIAKKYGGEVISVDSMQF YKGLDIATNKITVEEAEGVPHHMMSFLNPSDTSTYNVHHFKDTTLRLIQEIRSRSRIP ILVGGTTYYAESILYENNFIDSGKRTSSESSSSGGDSDSEEAKDDESTVSNQELWAEL RRVDEKSAMLLHPNNRSRVWRALQIFRDTGIPKSQHVELQKSDATVDLPGRLRSDDSL VIYMDATTEVLDERLDGRVDKMIRMGLKKELMEFYEGHRQAIQHLKYGVMQCIGLKEF VPWLNLDPSERDTPTGDKLFKQGCDDVKLHTRQYARRQRRWYKMRLLRRSDGDRKMAS TKMLDTSDKTRIISDGMEIVDRWMGGVDLFEEISPEPVLKGADANVILTCDVCSVTMT GRDNWRLHVGGKKHKHNVKKLKAQEQE" gene complement(<1788409..>1789845) /locus_tag="CAEBREN_24601" /db_xref="WormBase:WBGene00163326" mRNA complement(join(<1788409..1788587,1788996..1789079, 1789124..1789229,1789286..1789390,1789765..>1789845)) /locus_tag="CAEBREN_24601" /product="hypothetical protein" /db_xref="WormBase:CBN24601" /db_xref="WormBase:WBGene00163326" CDS complement(join(1788409..1788587,1788996..1789079, 1789124..1789229,1789286..1789390,1789765..1789845)) /locus_tag="CAEBREN_24601" /note="contains similarity to Pfam domain PF01725; contains similarity to Interpro domain IPR002637 (Ham1-like protein)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45651.1" /db_xref="InterPro:IPR002637" /db_xref="PFAM:PF01725" /db_xref="WormBase:CBN24601" /db_xref="WormBase:WBGene00163326" /translation="MSLRKINFVTGNAGKLREVKEILKNFEVTNVDVDLNEYQGEPEF IAERKCKEAVEAVKGPVLVEDTSLCFNAMGGLPGPYIKWFLKNLKPEGLHNMLAGFTD KTAYAQCIFAYTEGLGKPIHVFAGKCPGQIVAPRGDTTFGWDPCFQPDGFQETFGEMS KEVKNEISHRAKALELLKEHFEKN" gene complement(<1790166..>1800017) /locus_tag="CAEBREN_05336" /db_xref="WormBase:WBGene00144061" mRNA complement(join(<1790166..1790290,1793590..1793932, 1794005..1794075,1798387..1798528,1798718..1798915, 1799386..1799610,1799817..>1800017)) /locus_tag="CAEBREN_05336" /product="hypothetical protein" /db_xref="WormBase:CBN05336" /db_xref="WormBase:WBGene00144061" CDS complement(join(1790166..1790290,1793590..1793932, 1794005..1794075,1798387..1798528,1798718..1798915, 1799386..1799610,1799817..1800017)) /locus_tag="CAEBREN_05336" /note="contains similarity to Pfam domain PF01103; contains similarity to Interpro domain IPR000184 (Bacterial surface antigen (D15))" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45554.1" /db_xref="InterPro:IPR000184" /db_xref="PFAM:PF01103" /db_xref="WormBase:CBN05336" /db_xref="WormBase:WBGene00144061" /translation="MPEKTFHKAQTIREKAPGVPSIVEAVQFHGVRCTKNDALVKEVS ELYRSKTLDELVHNSHLAARHLQEVGLMDNAVALIDTSPDSKEGYVVNFLVREPKSFT AGVKAGVSTNGDADMSFNAGKQSVGGRGESIRSSYTYTVRGDHCFNLSAMKPFLGWQK YSNVSAAFFRSLAHMPWNQSDLDENAAILGYSGQLFDKKVLHEVKLNAIWRTLRAGRD AAFSVREHAGHTLKFSLENAIAVDTRDRPILASRGILARYAQEYAGVFGDASFVKNTV DLQAAAPLPFGFILAASLQAKHLKGLGDREVHILDRCYLGGQQDVRGFGLNTIGVKAD ASCLGGGATVAGVVHLYRPLVPPDMLFAHAFLASGSYASVHARNVVQQLQDSQRVSAG VGLAFVFKSIFRLELNYTFPLKYVMGDSLIPGFHIGAGVNFL" gene complement(<1800806..>1802799) /locus_tag="CAEBREN_15076" /db_xref="WormBase:WBGene00153801" mRNA complement(join(<1800806..1800967,1801011..1801171, 1801676..1802288,1802662..>1802799)) /locus_tag="CAEBREN_15076" /product="hypothetical protein" /db_xref="WormBase:CBN15076" /db_xref="WormBase:WBGene00153801" CDS complement(join(1800806..1800967,1801011..1801171, 1801676..1802288,1802662..1802799)) /locus_tag="CAEBREN_15076" /note="contains similarity to Pfam domains; contains similarity to Interpro domains IPR000795 (Protein synthesis factor, GTP-binding), IPR004130 (Protein of unknown function, ATP binding)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45799.1" /db_xref="InterPro:IPR000795" /db_xref="InterPro:IPR004130" /db_xref="WormBase:CBN15076" /db_xref="WormBase:WBGene00153801" /translation="MAEKDVPSSSAASDPAPELQTGPNVDQKPSVLVLGMAGSGKTTF VQRLTAYLHARKTPPYVINLDPAVTKVPYPVNVDIRDTVKYKEVMKEFGMGPNGAIMT CLNLMCTRFDKVIELINKRSQDFSVCLLDTPGQIEAFTWSASGSIITDSLASSHPTVV MYIVDSARATNPTTFMSNMLYACSILYRTKLPFIVVFNKADIVKPTFALKWMQDFERF DEALEDTRSSYMNDLSRSLSLVLDEFYCGLKTVCVSSATGEGFDDVMTAIAESVEAYK TEYVPMYEKVLAEKKLLDEAEKKKREEEAMKGKAVHDLNKKAHGDEDDEDGLEAELKS KVDRIHLGGVDEENEEDAEIERA" gene complement(<1803262..>1808777) /locus_tag="CAEBREN_06444" /db_xref="WormBase:WBGene00145169" mRNA complement(join(<1803262..1803555,1803848..1803928, 1804004..1804254,1804306..1804435,1804480..1804602, 1804807..1805178,1805279..1805320,1805735..1805937, 1806180..1806283,1806601..1806877,1806925..1807117, 1807412..1807710,1807874..1808004,1808578..>1808777)) /locus_tag="CAEBREN_06444" /product="hypothetical protein" /db_xref="WormBase:CBN06444" /db_xref="WormBase:WBGene00145169" CDS complement(join(1803262..1803555,1803848..1803928, 1804004..1804254,1804306..1804435,1804480..1804602, 1804807..1805178,1805279..1805320,1805735..1805937, 1806180..1806283,1806601..1806877,1806925..1807117, 1807412..1807710,1807874..1808004,1808578..1808777)) /locus_tag="CAEBREN_06444" /note="contains similarity to Pfam domain PF09758; contains similarity to Interpro domain IPR019155 (Protein of unknown function FPL)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45584.1" /db_xref="InterPro:IPR019155" /db_xref="PFAM:PF09758" /db_xref="WormBase:CBN06444" /db_xref="WormBase:WBGene00145169" /translation="MFRKLGSSGSLWKPKNPHSLEYLKYLQGILMKNEKVTENNKKIL VEALRAIAEILIWGDQNDASVFDFFLERQMLLHFLKIMEQGNTPLNVQLLQTLNILFE NIRHETSLYFLLSNNHVNSIISHKFDLHNEEIMAYYISFLKTISFKLNAATIHFFFNE TTEEFPLLIEVLKLYNWNESMVRIAVRNILLNIVRVDDDSMIIFVTRHIKEYLSELID SLVALSIEMDTFVRSAENVLANRERLRGKVDDLIDLIHYIGELLEVEAVAETLSILVT TRYLSPLLLSSISPRRDNHSLLLTPVSALFFFSEFLMVLRHHETIHTFLSSFLFDSQK TLMTHWIRHEQNYCLEPMTLSSPVGEEVVDQDCAFFDNLLEAFDSCRLDDSRAFYGLM LIYSMFQNKADVGELLSAANFPVLREPATTLAQQNLARLRIASTSSMTKRCRAITEVG VEATEEEDVFHDAAEERNLDDLIDDVLADFEPNPDDTGRSRFQSAADELPPSVPPPVP PTSSESPSPPGCDSRLFDALSSIIKAVGMDDNRIRPITLELACLVIRQILMTVDEERV HTNLTKLCSEVRLKLLEYIKQYVYGESLFLEWFEDEYAEFEVNHVNFDIIGYEMLLPP AATPLSNLSLHKRLPSGFEERLRTQIVFYLHIRKLERDLTGEGDTELPVRVFNSEQEP VAVGDCINLHNSDLLSCTVVPQQLCSLGKPGDRLQRFLVTDRLQLILVEPDSRKAGWA IVRFVGLLQDTTINGDSADSKVLHVVVEGQPSRLKKRHPVLTAKFVFDDHIRCMAAKQ RLTKGRQTARGLKLQAICNALGVPRIDPATQTPSSRHNPFRIVKGCAPGSVRKTVSSS SGSGQRPGYYSANLRSASRNSGIGGGVPEDPTQPSSSSERRNQ" gene <1809102..>1815161 /locus_tag="CAEBREN_22126" /db_xref="WormBase:WBGene00160851" mRNA join(<1809102..1809242,1809493..1809668,1809811..1809903, 1810087..1810235,1810312..1810391,1810529..1810700, 1810779..1810877,1810926..1811077,1811205..1811452, 1811552..1811595,1811773..1811975,1812028..1812226, 1812416..1812632,1813060..1813599,1813849..1814276, 1814513..1814691,1814976..>1815161) /locus_tag="CAEBREN_22126" /product="hypothetical protein" /db_xref="WormBase:CBN22126" /db_xref="WormBase:WBGene00160851" CDS join(1809102..1809242,1809493..1809668,1809811..1809903, 1810087..1810235,1810312..1810391,1810529..1810700, 1810779..1810877,1810926..1811077,1811205..1811452, 1811552..1811595,1811773..1811975,1812028..1812226, 1812416..1812632,1813060..1813599,1813849..1814276, 1814513..1814691,1814976..1815161) /locus_tag="CAEBREN_22126" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45684.1" /db_xref="WormBase:CBN22126" /db_xref="WormBase:WBGene00160851" /translation="MKQTSRPPAQYVVAPGTQFKLIANEYDKNKYAQCGYASHRTLIR CKQIRSKEDLAKNGGRCEEHNDFSKLLEQNHKKEIQRCHAENDTNMQRNRYDPWIASN EFITDEDDFLQPMRDAPLGVPESSNDNFLDNHPLRYAEHFTEKDVLRIKMDLVQKDIE DLMEFKRLLTAEAQKEHEQLGDDKEEDRPTGMVQGRLFKASEKYSRKDYLTLTTVDPV YKPCCVGPNMEDPMVIAHIMHSILDKIENVEPVSVESQCTRPALHLSNFCINHIRMDR RQKLFDLCKACGTTAIGGQEPKCSQHLKQQATAETNNCTCIKCVAPPPVPMDSPKEER PMKPESDDEETLGNLSKFESMASPMSQFPSPYNTSPLAQPRRRYQGPPAQVLRPPNMG PPPGSVPYHPNKRPAPMTSLTSAQLHEQQRLKMEEEEAKSQTCSRVRPLDASQYGNGK KKLQNQQRQQSHRLSTPTGSSPYHLQPPQAKKPGITPSPTGSPAGKTFQGWRNQGMSS SQRLPPQGFASHTRYPMQSNRPNPPPPKQIPLERVQEHREPSDHQEDREMVPPRYHQG APPEPQRRGVPYYRAAYRRADLPSMQQPNRHPSPLTPSTSTSSSQLLAPPQSPQGSPF RPQSRLPMAPHRAIAAGINPADVGTMPQRPPAYRIPQPPAPRHYSPQNQMTGPSAYPP QQFHSPLANPRSPMPSNFRPPQFGPVRMIGTPRPSQSGVHSITKSYVYQGGAPSSLSS GTSASSGTPGASGLAGTGPSGQSGSQNPQPPLSPEVDPVGGIDSGTESHGFDDIDTSG GVPQSSVAAIDSPGAPGTPPPAPLAPTRQRSVEEATSMAGINAIKSLESARHDVRFTN IPVKTYLALSNQQDLGQKTQEEIEKMAAEAEGLEKRKSFAGSGGSSSGGSSSSAAPRT PIHHQPPPPPIPKRWQPMPRGFSPKDSSVPDAVQEVVATPSTGRKRKADTSTGEPEKK KRDVDAQKDKTPKTPGKRAEPTVSTGRTPRAAAVAANHAIVHHQHHKQSVPTTSTPSS SNSAGESSQENPLDLLAELSAAAEIEEEKAAAAKTPNRKTPKRSTPPPAKTPTVTRSG RRSSRGNSLEKEL" gene complement(<1816928..>1818786) /locus_tag="CAEBREN_23086" /db_xref="WormBase:WBGene00161811" mRNA complement(join(<1816928..1817383,1818274..>1818786)) /locus_tag="CAEBREN_23086" /product="hypothetical protein" /db_xref="WormBase:CBN23086" /db_xref="WormBase:WBGene00161811" CDS complement(join(1816928..1817383,1818274..1818786)) /locus_tag="CAEBREN_23086" /note="contains similarity to Pfam domain PF00191; contains similarity to Interpro domains IPR018502 (Annexin repeat), IPR018252 (Annexin repeat, conserved site), IPR001464 (Annexin)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45681.1" /db_xref="InterPro:IPR001464" /db_xref="InterPro:IPR018252" /db_xref="InterPro:IPR018502" /db_xref="PFAM:PF00191" /db_xref="WormBase:CBN23086" /db_xref="WormBase:WBGene00161811" /translation="MASPYATIVDNKEFNAPLFAEKIDRALRAGEKDTVVKVLTSISN AQRQQLREPYKLKYGKDIIEALDKKFSGDLEKTIFALMETPLDYDVKQLKAAMKGLGT DEAVLIEILCSRTVDQLRAIRVSYEKEYKKALEADVAGDTSGEFRDLLVSLVTGAKDG SHDTNDAQAKDDAVRLFADGKAKLAKKDGTHFLHILATQNQYQLRKVFSYFQELAGNT IEKAIEKEFSGDLQKSYLTIVRAASDKQKFFAQQLYTSMKGLGTRDNDLIRVLVTRSE VDLELIKNEFVELYQKSLADMVKGDTSGAYRDALLAIINGNHAIAY" gene complement(<1827046..>1827300) /locus_tag="CAEBREN_03060" /db_xref="WormBase:WBGene00141785" mRNA complement(join(<1827046..1827171,1827220..>1827300)) /locus_tag="CAEBREN_03060" /product="hypothetical protein" /db_xref="WormBase:CBN03060" /db_xref="WormBase:WBGene00141785" CDS complement(join(1827046..1827171,1827220..1827300)) /locus_tag="CAEBREN_03060" /note="contains similarity to Interpro domain IPR006058 (2Fe-2S ferredoxin, iron-sulphur binding site)" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45537.1" /db_xref="InterPro:IPR006058" /db_xref="WormBase:CBN03060" /db_xref="WormBase:WBGene00141785" /translation="MKLTIYFLFFFLIAFISTAPTTPGVKKPIGKSVFIPVATLMSEE HISNLEIDCHFCCKNGGCGVCCDF" assembly_gap 1831178..1843992 /estimated_length=12815 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<1859116..>1863450) /locus_tag="CAEBREN_01027" /db_xref="WormBase:WBGene00139752" mRNA complement(join(<1859116..1859278,1863389..>1863450)) /locus_tag="CAEBREN_01027" /product="hypothetical protein" /db_xref="WormBase:CBN01027" /db_xref="WormBase:WBGene00139752" CDS complement(join(1859116..1859278,1863389..1863450)) /locus_tag="CAEBREN_01027" /codon_start=1 /product="hypothetical protein" /protein_id="EGT45675.1" /db_xref="WormBase:CBN01027" /db_xref="WormBase:WBGene00139752" /translation="MINENIDVSRKLANDVMGRKRLLFSITTSKKIRTNPPKDSSKRD IIEVVKSDNIYLASLKNAIVYSKFNLMQFG" assembly_gap 1867599..1868598 /estimated_length=1000 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1880268..1881267 /estimated_length=1000 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 1883148..1884147 /estimated_length=1000 /gap_type="within scaffold" /linkage_evidence="unspecified" CONTIG join(ABEG02000169.1:1..1936,gap(827),ABEG02000170.1:1..8063, gap(10),ABEG02000171.1:1..15820,gap(10),ABEG02000172.1:1..917, gap(10),ABEG02000173.1:1..2322,gap(10),ABEG02000174.1:1..4030, gap(7442),ABEG02000175.1:1..11188,gap(311),ABEG02000176.1:1..1240, gap(10),ABEG02000177.1:1..47474,gap(10),ABEG02000178.1:1..4091, gap(10),ABEG02000179.1:1..23802,gap(10),ABEG02000180.1:1..15698, gap(10),ABEG02000181.1:1..4943,gap(34),ABEG02000182.1:1..3803, gap(10),ABEG02000183.1:1..2360,gap(10),ABEG02000184.1:1..3215, gap(10),ABEG02000185.1:1..3802,gap(10),ABEG02000186.1:1..1943, gap(49),ABEG02000187.1:1..3533,gap(15),ABEG02000188.1:1..35657, gap(10),ABEG02000189.1:1..1192,gap(1304),ABEG02000190.1:1..24557, gap(303),ABEG02000191.1:1..5611,gap(18430),ABEG02000192.1:1..35661, gap(10),ABEG02000193.1:1..1131,gap(10),ABEG02000194.1:1..60199, gap(10),ABEG02000195.1:1..26032,gap(234),ABEG02000196.1:1..4716, gap(10),ABEG02000197.1:1..2560,gap(862),ABEG02000198.1:1..14112, gap(10),ABEG02000199.1:1..5801,gap(261),ABEG02000200.1:1..43136, gap(1061),ABEG02000201.1:1..1511,gap(2680),ABEG02000202.1:1..759, gap(10),ABEG02000203.1:1..719,gap(42),ABEG02000204.1:1..88904, gap(6731),ABEG02000205.1:1..53515,gap(10),ABEG02000206.1:1..5682, gap(311),ABEG02000207.1:1..2451,gap(10),ABEG02000208.1:1..42019, gap(10),ABEG02000209.1:1..3005,gap(11217),ABEG02000210.1:1..27422, gap(10),ABEG02000211.1:1..20087,gap(11),ABEG02000212.1:1..35169, gap(333),ABEG02000213.1:1..23402,gap(10),ABEG02000214.1:1..23495, gap(10),ABEG02000215.1:1..6294,gap(10),ABEG02000216.1:1..1326, gap(10),ABEG02000217.1:1..204015,gap(6616), ABEG02000218.1:1..104854,gap(10),ABEG02000219.1:1..11647, gap(10289),ABEG02000220.1:1..41506,gap(10),ABEG02000221.1:1..28606, gap(707),ABEG02000222.1:1..214020,gap(10),ABEG02000223.1:1..1523, gap(10),ABEG02000224.1:1..21121,gap(10),ABEG02000225.1:1..60615, gap(594),ABEG02000226.1:1..12020,gap(69),ABEG02000227.1:1..14267, gap(156),ABEG02000228.1:1..3383,gap(155),ABEG02000229.1:1..11603, gap(10),ABEG02000230.1:1..45605,gap(10),ABEG02000231.1:1..281, gap(10),ABEG02000232.1:1..44677,gap(10),ABEG02000233.1:1..8249, gap(146),ABEG02000234.1:1..14603,gap(143),ABEG02000235.1:1..21261, gap(259),ABEG02000236.1:1..936,gap(10),ABEG02000237.1:1..33528, gap(10),ABEG02000238.1:1..3600,gap(335),ABEG02000239.1:1..1281, gap(12656),ABEG02000240.1:1..603,gap(10),ABEG02000241.1:1..36186, gap(526),ABEG02000242.1:1..49373,gap(12815), ABEG02000243.1:1..23606,gap(1000),ABEG02000244.1:1..11669, gap(1000),ABEG02000245.1:1..1880,gap(1000),ABEG02000246.1:1..7242) //